View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7352_low_3 (Length: 291)
Name: NF7352_low_3
Description: NF7352
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7352_low_3 |
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Alignment Details
Target: chr8 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 20 - 275
Target Start/End: Original strand, 7997734 - 7997986
Alignment:
| Q |
20 |
ttctacttataacataaatatcataataatgctgtgcaatttctcaccctcatgcatcagagagaataacaattaagtgaaattgatgttctattatcct |
119 |
Q |
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| T |
7997734 |
ttctacctataacataaatatcataataatgctgtgcaatttc--accctcgtgcatcagagagaataacaat-aagtgaaattgatgttctattatcct |
7997830 |
T |
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| Q |
120 |
tagaggtaggcacatgattcaagtgcaatttaaaactccatttatccgtagagaaactcagaacttcaggtagaaacattggacaaaattaaaagtgtat |
219 |
Q |
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| T |
7997831 |
tagaggtaggcacatgattcaagtgcaatttaaaactccatttatctgtagagaaactcagaacttcaggtagaaacattggacaaaattaaaagtgtat |
7997930 |
T |
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| Q |
220 |
cggcaagacctctaaatcataattaaattagctcgaacgaatctaattctaaaaac |
275 |
Q |
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| T |
7997931 |
cggcaagacctctaaatcataattaaattggctcaaacgaatctaattctaaaaac |
7997986 |
T |
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