View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7355_low_12 (Length: 248)
Name: NF7355_low_12
Description: NF7355
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7355_low_12 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 17 - 248
Target Start/End: Complemental strand, 44622558 - 44622327
Alignment:
| Q |
17 |
acttgtggtggtaactggcaacaattttcagtttcttgccacattttcatgaaccatttaacttttggcttgaaatttttgtggttgatatcaatttgca |
116 |
Q |
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| T |
44622558 |
acttgtggtggtaactggcaacaattttcagtttcttgccacattttcatgaaccatttaacttttggcttgaaatttttgtggttgatatcaatttgca |
44622459 |
T |
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| Q |
117 |
ttttaatcgtctccttcgatagttgatacatggaatgagtgatcattatggtgcaattgtttgccaccaccatttgaagaggtgttaaatggctattgtt |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44622458 |
ttttaatcgtctccttcgatagttgatacatggaatgagtgatcattatggtgcaactgtttgccaccaccatttgaagaggtgttaaatggctattgtt |
44622359 |
T |
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| Q |
217 |
gcaggatgacaagagataaaatttaaaaatat |
248 |
Q |
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||| |||||||||||||||||||||||||||| |
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| T |
44622358 |
gcaagatgacaagagataaaatttaaaaatat |
44622327 |
T |
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