View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7355_low_3 (Length: 429)
Name: NF7355_low_3
Description: NF7355
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7355_low_3 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 371; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 371; E-Value: 0
Query Start/End: Original strand, 10 - 429
Target Start/End: Original strand, 35655400 - 35655819
Alignment:
| Q |
10 |
attattctccaaaaggatactaaatcacaaatagagtagttcagcaaatatgaaggtttaataaaaaatacaagggatatcatgatcctcatttctgtta |
109 |
Q |
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|||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |
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| T |
35655400 |
attattcttcaaaaggatactgaatcacaaatagagtagttcagcaaatatgaaggtttaataaaaaataaaagggatatcatgaccctcatttctgtta |
35655499 |
T |
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| Q |
110 |
caagttatcttcaattttactaatgcttcgacatcttaacggctaacaataattggttcttgctcccttaactcactgtcaatgttatcagacataatat |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
35655500 |
caagttatcttcaattttactaatgcttcgacatcttaacggctaacaataattggttcttgctcccttaactcactgtcaatggtatcagacataatat |
35655599 |
T |
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| Q |
210 |
attagttaaacatataaaggactgtctacataccatagtaaaaaggacagatatcaaatatgacctactagatcaccgatattaggtgagtataatgtct |
309 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
35655600 |
attagttaaacatataaaggactgtctatataccatagtaaaaaggacagatatcaaatatgacctactagatcaccgatattaggtgagtataatttct |
35655699 |
T |
|
| Q |
310 |
ctgaaacttgtaattgtttcaacnnnnnnntcgtgtcaaagacccgtattataaaacttacaaaaacctatagatatcatatataaacattccatttatg |
409 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35655700 |
ctgaaacttgtaattgtttcaacaaaaaaatcgtgtcaaagacccgtattataaaacttacaaaaacctatagatatcatatataaacattccatttatg |
35655799 |
T |
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| Q |
410 |
aaacaaattccacattatga |
429 |
Q |
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| T |
35655800 |
aaacaaattccacattatga |
35655819 |
T |
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