View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7355_low_9 (Length: 295)
Name: NF7355_low_9
Description: NF7355
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7355_low_9 |
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Alignment Details
Target: chr6 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 30576379 - 30576100
Alignment:
| Q |
1 |
ctaacaaggtcacacaacaatattgttcacacttcacacattcttgattctggttcttgccaattacaaagtttggtgaattgttattttcattactata |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
30576379 |
ctaacaaggtcacacaacaatattgttcacacttcacacattcttgattctggttcttgccaattacaaagtttgctgaattgttattttcattactata |
30576280 |
T |
|
| Q |
101 |
gcttcaatgtaatagtcctcctcatccctcttgtatataaatttaatgtaatgctgatccattaatcaatggttctttcttcaatataattgttctcctt |
200 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30576279 |
gcttcaatgtaatagtcctcctcatccatcttgtatataaatttaatgtaatgctgatccattaatcaatggttctttcttcaatataattgttctcctt |
30576180 |
T |
|
| Q |
201 |
cctctgtattatctcccgtcgatattatggaagaaaccaaccactacgacaacaaagtcattcattctcggcaagcacag |
280 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30576179 |
cctctgtattatctcccgtcgatattatggaagaaaccaaccactacgacaacaaagtcattcattctcggcaagcacag |
30576100 |
T |
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