View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7356_high_2 (Length: 503)
Name: NF7356_high_2
Description: NF7356
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7356_high_2 |
 | |
|
| [»] scaffold0044 (1 HSPs) |
| | |
|
| [»] scaffold0440 (2 HSPs) |
| | |
|
| [»] scaffold0016 (1 HSPs) |
| | |
|
| [»] scaffold0321 (1 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 269; Significance: 1e-150; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 200 - 485
Target Start/End: Complemental strand, 27761420 - 27761133
Alignment:
| Q |
200 |
aacttgaattaa--caaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaat |
297 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27761420 |
aacttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaat |
27761321 |
T |
|
| Q |
298 |
gccttagtgaatatgtttgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgctt |
397 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
27761320 |
gccttagtgaatatgtctgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgttt |
27761221 |
T |
|
| Q |
398 |
ctatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
485 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27761220 |
ctatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
27761133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 200 - 485
Target Start/End: Original strand, 7940217 - 7940504
Alignment:
| Q |
200 |
aacttgaattaa--caaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaat |
297 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7940217 |
aacttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaat |
7940316 |
T |
|
| Q |
298 |
gccttagtgaatatgtttgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgctt |
397 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||| |
|
|
| T |
7940317 |
gccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgaagtgctcccttgttcacttgctccctcagaaaatggaacttggctt |
7940416 |
T |
|
| Q |
398 |
ctatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
485 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7940417 |
ctatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
7940504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 44 - 464
Target Start/End: Complemental strand, 22581104 - 22580684
Alignment:
| Q |
44 |
attgagtttcttgagaagcaagtcctctctcaaacccaaacaacctaatgataaaatctagcaaaaatgtaactaacttcataacaaacaaaattaactt |
143 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22581104 |
attgagtttcttgagaagcaagtcctctctcaaaccctaacaacctaatgataaaatctagcaaaaatgtaactaacttcataacaaacaaaattaactt |
22581005 |
T |
|
| Q |
144 |
gattactatgtgatcttaaccaaacaaccttgattaagtcactaatcacttattctaacttgaattaacaaactaacatcctcccttaattcaagtttcc |
243 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22581004 |
gattactatgtgatcttaaccaaacaaccttgattaagtcactaatcacttattctaacttgaattaacaaactaacatcctcccttaattcaagtttcc |
22580905 |
T |
|
| Q |
244 |
acttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaatgccttagtgaatatgtttgcaagctgcagctcagtagagcaatgaa |
343 |
Q |
| |
|
|||| | ||| | ||| | |||||| ||||||||||| |||||||||||| | || ||||| | | |||||||||||| ||||| ||||| |||| |
|
|
| T |
22580904 |
actttcaccatactaattatgcttcttagcttgatgaacgtgtcaaccttcataggtttggtgaacaaatctgcaagctgcagttcagtggagcagtgaa |
22580805 |
T |
|
| Q |
344 |
caatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgcttctatatgcttgcttcttccatgcagaactggatttcttgctaagct |
443 |
Q |
| |
|
|||||| || |||| ||||||| ||||| || | |||||||| || || || || || |||||||| |||||||| | |||||||||| | |||||| | |
|
|
| T |
22580804 |
caatcttcaatgcttccttgtttacttgttctataagaaaatggaatttggcctcaatgtgcttgctccttccatgtaaaactggatttttagctaagtt |
22580705 |
T |
|
| Q |
444 |
tatagcagatttgttgtctat |
464 |
Q |
| |
|
||||| |||||||||||||| |
|
|
| T |
22580704 |
tatagttgatttgttgtctat |
22580684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 200 - 480
Target Start/End: Original strand, 13828237 - 13828520
Alignment:
| Q |
200 |
aacttgaattaacaa----actaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttca |
295 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| | ||||||||| | |
|
|
| T |
13828237 |
aacttgaattaacaactagactaacatcctcccttaattcaagtttccacttccttcatgccaatcaaacttctgagcttgatgaacccgtcaaccttta |
13828336 |
T |
|
| Q |
296 |
atgccttagtgaatatgtttgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgc |
395 |
Q |
| |
|
|||| ||||||||||||| |||||| ||||||||||| |||||||| ||||||| || ||| || ||||| ||||||||||| | |||||||||||| || |
|
|
| T |
13828337 |
atgc-ttagtgaatatgtctgcaagttgcagctcagtggagcaatggacaatctacaatgcacctttgtttacttgctccctcaaaaaatgaaacttagc |
13828435 |
T |
|
| Q |
396 |
ttctatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggt |
480 |
Q |
| |
|
||||| || |||||||||||||||| |||||||||||||||||||||||| | ||||||||| ||||||| |||| | |||||| |
|
|
| T |
13828436 |
ctctatgtgtttgcttcttccatgcaaaactggatttcttgctaagcttattgtagatttgttatctatgaacaatgcaataggt |
13828520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 53 - 222
Target Start/End: Original strand, 7678763 - 7678933
Alignment:
| Q |
53 |
cttgagaagcaagtcctctctcaaacccaaacaacctaatgataaaatctagcaaaa-atgtaactaacttcataacaaacaaaattaacttgattacta |
151 |
Q |
| |
|
|||||||| |||||| |||| |||||| || ||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
7678763 |
cttgagaaacaagtcatctccaaaaccctaataacctaatgctaaaatctagcaaaaaatgtaactaacttcataacaaacaaaactaacttgattacta |
7678862 |
T |
|
| Q |
152 |
tgtgatcttaaccaaacaaccttgattaagtcactaatcacttattctaacttgaattaacaaactaacat |
222 |
Q |
| |
|
||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
7678863 |
tgtgatcttaaccaaacaaacttgattaagtcacaaatcacttattctaacttgaattaacaaactaacat |
7678933 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 22581409 - 22581368
Alignment:
| Q |
5 |
aagttaatgtttcgtctttgaatttgtatgcatccgttaatt |
46 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
22581409 |
aagttaatgtttcgtctttgaatttgtatgcatcggttaatt |
22581368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 265; Significance: 1e-147; HSPs: 12)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 265; E-Value: 1e-147
Query Start/End: Original strand, 200 - 485
Target Start/End: Original strand, 40367734 - 40368021
Alignment:
| Q |
200 |
aacttgaattaa--caaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaat |
297 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40367734 |
aacttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaat |
40367833 |
T |
|
| Q |
298 |
gccttagtgaatatgtttgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgctt |
397 |
Q |
| |
|
|||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
40367834 |
gccttagtgaatatgtctgcaagctgcagcttagtagagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaacttggctt |
40367933 |
T |
|
| Q |
398 |
ctatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
485 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40367934 |
ctatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
40368021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 200 - 485
Target Start/End: Complemental strand, 12023312 - 12023025
Alignment:
| Q |
200 |
aacttgaattaa--caaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaat |
297 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12023312 |
aacttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaat |
12023213 |
T |
|
| Q |
298 |
gccttagtgaatatgtttgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgctt |
397 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
12023212 |
gccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgctt |
12023113 |
T |
|
| Q |
398 |
ctatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
485 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
12023112 |
ctatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagtaattctataggtctgct |
12023025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 200 - 485
Target Start/End: Original strand, 7099508 - 7099795
Alignment:
| Q |
200 |
aacttgaattaa--caaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaat |
297 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7099508 |
aacttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaat |
7099607 |
T |
|
| Q |
298 |
gccttagtgaatatgtttgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgctt |
397 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||| |
|
|
| T |
7099608 |
gccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgaagtgctcccttgttcacttgctccctcagaaaatggaacttggctt |
7099707 |
T |
|
| Q |
398 |
ctatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
485 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7099708 |
ctatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
7099795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 200 - 485
Target Start/End: Complemental strand, 16798692 - 16798405
Alignment:
| Q |
200 |
aacttgaattaa--caaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaat |
297 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16798692 |
aacttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaat |
16798593 |
T |
|
| Q |
298 |
gccttagtgaatatgtttgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgctt |
397 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||| |
|
|
| T |
16798592 |
gccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgaagtgctcccttgttcacttgctccctcagaaaatggaacttggctt |
16798493 |
T |
|
| Q |
398 |
ctatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
485 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16798492 |
ctatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
16798405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 200 - 482
Target Start/End: Complemental strand, 37682059 - 37681775
Alignment:
| Q |
200 |
aacttgaattaa--caaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaat |
297 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37682059 |
aacttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaat |
37681960 |
T |
|
| Q |
298 |
gccttagtgaatatgtttgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgctt |
397 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
37681959 |
gccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcatttgctccctcagaaaatgaaactttgctt |
37681860 |
T |
|
| Q |
398 |
ctatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtct |
482 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |
|
|
| T |
37681859 |
ctatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcaaatttgttgtctatgagtaattctataggtct |
37681775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 200 - 485
Target Start/End: Complemental strand, 10277227 - 10276940
Alignment:
| Q |
200 |
aacttgaattaa--caaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaat |
297 |
Q |
| |
|
|||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
10277227 |
aacttgaattaaaacaaactaacatcctctcttaattcgagtttccacttccttcattccaatcaagcttctgagcttgatgaacctgtcaaccttcaat |
10277128 |
T |
|
| Q |
298 |
gccttagtgaatatgtttgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgctt |
397 |
Q |
| |
|
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |
|
|
| T |
10277127 |
gccttagtgaatatgtccgcaagctgtagctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctccctcagaaaatgaaacttggctt |
10277028 |
T |
|
| Q |
398 |
ctatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
485 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||| ||||| |||||||||||| |
|
|
| T |
10277027 |
ctatatgcttgcttcttccatgcagaattggatttcttactaagcttatagcagatttgttgtatatgaacaattatataggtctgct |
10276940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 200 - 368
Target Start/End: Original strand, 26336941 - 26337111
Alignment:
| Q |
200 |
aacttgaattaa--caaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaat |
297 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
26336941 |
aacttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaacctgtcaaccttcaat |
26337040 |
T |
|
| Q |
298 |
gccttagtgaatatgtttgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgttcac |
368 |
Q |
| |
|
|||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
26337041 |
gccttagtgaatatgtctacaagctgcagctcagtagagcaatgaaaaatctgcagtgctcccttgttcac |
26337111 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 143 - 471
Target Start/End: Original strand, 26454335 - 26454664
Alignment:
| Q |
143 |
tgattactatgtgatcttaaccaaacaaccttgattaagtcactaatcacttattctaacttgaattaacaaa-ctaacatcctcccttaattcaagttt |
241 |
Q |
| |
|
|||||||||||||||||||| |||||| |||| ||||||||| | ||||||||| ||||||||||| ||| ||||| |||||||||||||||||||| |
|
|
| T |
26454335 |
tgattactatgtgatcttaatcaaacagttttgactaagtcactgaacacttattcaaacttgaattattaaaactaacttcctcccttaattcaagttt |
26454434 |
T |
|
| Q |
242 |
ccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaatgccttagtgaatatgtttgcaagctgcagctcagtagagcaatg |
341 |
Q |
| |
|
||||||| ||| ||||||| ||| || |||||||||||| ||||||||||||| | ||||||||||| | |||||| ||||||||| | || ||||| |
|
|
| T |
26454435 |
ccacttcaaccataccaatcatgctccttagcttgatgaatatgtcaaccttcaaaggtttagtgaatatatctgcaagttgcagctcaatggaacaatg |
26454534 |
T |
|
| Q |
342 |
aacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgcttctatatgcttgcttcttccatgcagaactggatttcttgctaag |
441 |
Q |
| |
|
|||||| |||| ||| ||||||| ||||| ||||| ||||| |||||||| |||| || || || || ||||||||| || |||||| |||||||| |
|
|
| T |
26454535 |
aacaatttgcaatgcctccttgttaacttgttccctcagaaagtgaaacttaacttcaatgtgtttactcattccatgcaaaattggattatttgctaag |
26454634 |
T |
|
| Q |
442 |
cttatagcagatttgttgtctatgagcaat |
471 |
Q |
| |
|
| |||| |||||||| ||||||| |||| |
|
|
| T |
26454635 |
ttaatagatgatttgttatctatgaacaat |
26454664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 139 - 295
Target Start/End: Complemental strand, 25632807 - 25632653
Alignment:
| Q |
139 |
aacttgattactatgtgatcttaaccaaacaa-ccttgattaagtcactaatcacttattctaacttgaattaacaaactaacatcctcccttaattcaa |
237 |
Q |
| |
|
|||||| |||||||||| | |||||||||||| |||||||||| ||||||||| ||| |||||||||||||| |||||||||||| ||||||||||| |
|
|
| T |
25632807 |
aacttggttactatgtgtt-ttaaccaaacaagccttgattaaaacactaatcaactatactaacttgaattaa--aactaacatccttccttaattcaa |
25632711 |
T |
|
| Q |
238 |
gtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttca |
295 |
Q |
| |
|
|||| |||| | ||| ||||||| |||||| || |||||||| |||||||||||| |
|
|
| T |
25632710 |
gttttcactctcaccataccaatcaggcttctcagtttgatgaacatgtcaaccttca |
25632653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 361 - 463
Target Start/End: Complemental strand, 30067094 - 30066992
Alignment:
| Q |
361 |
ttgttcacttgctcccttagaaaatgaaactttgcttctatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgt |
460 |
Q |
| |
|
||||||||||| || || |||||||||||||||||||| |||||||||||||||||||||| || ||||| | |||||| |||| ||||||| |||| |
|
|
| T |
30067094 |
ttgttcacttgttctctgagaaaatgaaactttgcttcaatatgcttgcttcttccatgcaacacatgatttttggctaagtttatggcagattgattgt |
30066995 |
T |
|
| Q |
461 |
cta |
463 |
Q |
| |
|
||| |
|
|
| T |
30066994 |
cta |
30066992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 48 - 214
Target Start/End: Complemental strand, 16117752 - 16117586
Alignment:
| Q |
48 |
agtttcttgagaagcaagtcctctctcaaacccaaacaacctaatgataaaatctagcaaaaatgtaactaacttcataacaaacaaaat-taacttgat |
146 |
Q |
| |
|
|||| |||||| | |||||| |||||||||||| ||| |||| ||| ||||||| ||||||| ||||| || || |||||||| |||| ||||||||| |
|
|
| T |
16117752 |
agttgcttgaggaacaagtcatctctcaaaccccaactaccttatgctaaaatcaagcaaaaccgtaacaaagtt-ttaacaaactaaatctaacttgat |
16117654 |
T |
|
| Q |
147 |
tactatgtgatcttaaccaaacaa-ccttgattaagtcactaatcacttattctaacttgaattaacaa |
214 |
Q |
| |
|
||||||||||| |||||||||||| |||||||| |||||||||| || ||| ||||||||||||| |
|
|
| T |
16117653 |
tactatgtgat-ttaaccaaacaagttttgattaaatcactaatcaactacactatcttgaattaacaa |
16117586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 461
Target Start/End: Complemental strand, 25632567 - 25632487
Alignment:
| Q |
381 |
aaaatgaaactttgcttctatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtc |
461 |
Q |
| |
|
||||||||| || ||||| | ||| |||| |||||| |||||||||||||| | || ||| ||||||| ||||||||||| |
|
|
| T |
25632567 |
aaaatgaaagttggcttcagtgtgcgtgctccttccaagcagaactggatttttagccaagtttatagctgatttgttgtc |
25632487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 264; Significance: 1e-147; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 210 - 485
Target Start/End: Complemental strand, 21850210 - 21849935
Alignment:
| Q |
210 |
aacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaatgccttagtgaat |
309 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
21850210 |
aacaaactaacatcctcccttaattcaagtttccacttccttcattccaataaagcttctgagcttgttgaatctgtcaaccttcaatgccttagtgaat |
21850111 |
T |
|
| Q |
310 |
atgtttgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgcttctatatgcttgc |
409 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21850110 |
atgtctgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgcttctatatgcttgc |
21850011 |
T |
|
| Q |
410 |
ttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
485 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21850010 |
ttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
21849935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 200 - 485
Target Start/End: Original strand, 54167478 - 54167765
Alignment:
| Q |
200 |
aacttgaattaa--caaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaat |
297 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
54167478 |
aacttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaat |
54167577 |
T |
|
| Q |
298 |
gccttagtgaatatgtttgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgctt |
397 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
54167578 |
gccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgctt |
54167677 |
T |
|
| Q |
398 |
ctatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
485 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54167678 |
ctatgtgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
54167765 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 200 - 485
Target Start/End: Complemental strand, 43554315 - 43554028
Alignment:
| Q |
200 |
aacttgaattaa--caaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaat |
297 |
Q |
| |
|
|||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
43554315 |
aacttgaattaaaacaaactaacatctccccttaattcaagtttccacttccttcattcaaatcaagcttctgagcttgatgaacctgtcaaccttcaat |
43554216 |
T |
|
| Q |
298 |
gccttagtgaatatgtttgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgctt |
397 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||| || |||| ||||||||||| ||||||| |||||||||||||| |||| |
|
|
| T |
43554215 |
gccttagtgaatatgtttgcaagctgcagctcaatagagcaatgaacaatctacaatgcttccttgttcactagctccctcagaaaatgaaacttggctt |
43554116 |
T |
|
| Q |
398 |
ctatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
485 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||| |||| | ||||||||||| |
|
|
| T |
43554115 |
ctatatgcttgcttcttccatgcagaactggatttcttgctaagattataccatatttgttgtctatgaacaatgccataggtctgct |
43554028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 213 - 485
Target Start/End: Original strand, 53353126 - 53353403
Alignment:
| Q |
213 |
aaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgat-----gaatctgtcaaccttcaatgccttagtga |
307 |
Q |
| |
|
|||||| ||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||| || |||| |
|
|
| T |
53353126 |
aaactagcatcctctcttaatttaagtttccacttccttcatgccaatcaagcttctgagcttgatatgatgaacctgtcaaccttcaatgcttttgtga |
53353225 |
T |
|
| Q |
308 |
atatgtttgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgcttctatatgctt |
407 |
Q |
| |
|
|||||| |||||||||||||||||| |||||||| |||||||||| ||| || |||||||||||||||||||||||||| || || || | ||||||||| |
|
|
| T |
53353226 |
atatgtctgcaagctgcagctcagtggagcaatggacaatctgcaatgcacctttgttcacttgctcccttagaaaatggaatttagcctttatatgctt |
53353325 |
T |
|
| Q |
408 |
gcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
485 |
Q |
| |
|
|||||| |||||||||||||||||| ||||||||||||||||| |||||||||| |||| |||| ||||||||||||| |
|
|
| T |
53353326 |
gcttctcccatgcagaactggatttattgctaagcttatagcatatttgttgtcgatgaacaatgctataggtctgct |
53353403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 133 - 222
Target Start/End: Complemental strand, 450569 - 450481
Alignment:
| Q |
133 |
aaaattaacttgattactatgtgatcttaaccaaacaaccttgattaagtcactaatcacttattctaacttgaattaacaaactaacat |
222 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
450569 |
aaaattaacttgattactatgtgatcttaagcaaacaaa-ttgattaagtcactaatcacttattctaacttgaattaacaaactaacat |
450481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 200 - 289
Target Start/End: Complemental strand, 1299087 - 1298999
Alignment:
| Q |
200 |
aacttgaattaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaa |
289 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||| ||| ||| |||||||||||| | |||| | |||||||||||| |
|
|
| T |
1299087 |
aacttgaattag-aaactaacatcctcccttaattcaagtttccaattctaccataccaatcaagcttttaagctcgttgaatctgtcaa |
1298999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 257; Significance: 1e-143; HSPs: 12)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 200 - 485
Target Start/End: Original strand, 30405937 - 30406224
Alignment:
| Q |
200 |
aacttgaattaa--caaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaat |
297 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
30405937 |
aacttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaatcttcaat |
30406036 |
T |
|
| Q |
298 |
gccttagtgaatatgtttgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgctt |
397 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |
|
|
| T |
30406037 |
gccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgcagtgctcccttgttcacttgttcccttagaaaatggaactttgctt |
30406136 |
T |
|
| Q |
398 |
ctatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
485 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30406137 |
ctatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
30406224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 200 - 485
Target Start/End: Original strand, 197818 - 198105
Alignment:
| Q |
200 |
aacttgaattaa--caaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaat |
297 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
197818 |
aacttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaat |
197917 |
T |
|
| Q |
298 |
gccttagtgaatatgtttgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgctt |
397 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
197918 |
gccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgctt |
198017 |
T |
|
| Q |
398 |
ctatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
485 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
198018 |
ctatgtgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
198105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 200 - 485
Target Start/End: Original strand, 312655 - 312942
Alignment:
| Q |
200 |
aacttgaattaa--caaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaat |
297 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
312655 |
aacttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaat |
312754 |
T |
|
| Q |
298 |
gccttagtgaatatgtttgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgctt |
397 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
312755 |
gccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgctt |
312854 |
T |
|
| Q |
398 |
ctatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
485 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
312855 |
ctatgtgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
312942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 200 - 485
Target Start/End: Original strand, 43807617 - 43807904
Alignment:
| Q |
200 |
aacttgaattaa--caaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaat |
297 |
Q |
| |
|
|||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43807617 |
aacttgaattaaaacaagctaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaat |
43807716 |
T |
|
| Q |
298 |
gccttagtgaatatgtttgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgctt |
397 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||| |
|
|
| T |
43807717 |
gccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgaagtgctcccttgttcacttgctccctcagaaaatggaacttggctt |
43807816 |
T |
|
| Q |
398 |
ctatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
485 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43807817 |
ctatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
43807904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 210 - 483
Target Start/End: Complemental strand, 1291335 - 1291062
Alignment:
| Q |
210 |
aacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaatgccttagtgaat |
309 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||| |
|
|
| T |
1291335 |
aacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagtttgatgaatctgtcaaccttcaaagctttagtgaat |
1291236 |
T |
|
| Q |
310 |
atgtttgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgcttctatatgcttgc |
409 |
Q |
| |
|
|| | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
1291235 |
atatctgcaagctgatgctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctccctcagaaaatgaaacttggcttctatatgcttgc |
1291136 |
T |
|
| Q |
410 |
ttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctg |
483 |
Q |
| |
|
|||| ||| ||||||||||||||||||| |||||||||| ||||||||||||||||| |||| |||||||||| |
|
|
| T |
1291135 |
ttctcccaagcagaactggatttcttgccaagcttatagtagatttgttgtctatgaacaatattataggtctg |
1291062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 213 - 485
Target Start/End: Complemental strand, 41949810 - 41949546
Alignment:
| Q |
213 |
aaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaatgccttagtgaatatg |
312 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
41949810 |
aaactaacatcctcccttaattcaagtttccacttccttcattcaaatcaagcttctgagcttgatgaaactgtcaaccttcaatgccttagtgaatatg |
41949711 |
T |
|
| Q |
313 |
tttgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgcttctatatgcttgcttc |
412 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||| || |||||||||||||||| | |||||| ||||| |||| ||| |||||||||| |
|
|
| T |
41949710 |
tctgcaagctgcagctcagtagagcaatgaacaatctgtag--------tgttcacttgctccctcaaaaaatggaacttagcttatatgtgcttgcttc |
41949619 |
T |
|
| Q |
413 |
ttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
485 |
Q |
| |
|
| |||| || || |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
41949618 |
tcccatacaaaattggatttcttgctaagcttatagcagatttgttgtccatgaacaattctataggtctgct |
41949546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 233 - 485
Target Start/End: Original strand, 31473324 - 31473576
Alignment:
| Q |
233 |
ttcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaatgccttagtgaatatgtttgcaagctgcagctcagt |
332 |
Q |
| |
|
|||||||||||||||||||||| || |||| ||||| ||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||| |
|
|
| T |
31473324 |
ttcaagtttccacttccttcatggcagtcaaacttcttagcttgatgaacctgtcaaccttcaataccttagtgaatatgtctgcaagctgcagctcagt |
31473423 |
T |
|
| Q |
333 |
agagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgcttctatatgcttgcttcttccatgcagaactggattt |
432 |
Q |
| |
|
|||||||| |||||||||||| |||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| |||| ||||||| |
|
|
| T |
31473424 |
ggagcaatggacaatctgcagttctcccttgttcacttgctccctcagaaaatggaacttagcttctatatgcttgcttcttccatgaagaattggattt |
31473523 |
T |
|
| Q |
433 |
cttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
485 |
Q |
| |
|
|||||||||||||||| ||||||||| ||||||| |||| | ||||||||||| |
|
|
| T |
31473524 |
cttgctaagcttatagaagatttgttatctatgaacaatgcaataggtctgct |
31473576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 222 - 485
Target Start/End: Original strand, 27435339 - 27435602
Alignment:
| Q |
222 |
tcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaatgccttagtgaatatgtttgcaagc |
321 |
Q |
| |
|
||||| |||||||||||||| |||||| ||||| |||||||| || | ||||||||||| |||||| ||||||||| |||||||||||| | ||||||| |
|
|
| T |
27435339 |
tcctctcttaattcaagttttcacttctttcatgccaatcaaactctttagcttgatgaacctgtcatccttcaatggcttagtgaatatttctgcaagc |
27435438 |
T |
|
| Q |
322 |
tgcagctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgcttctatatgcttgcttcttccatgca |
421 |
Q |
| |
|
||||||| ||| | |||||||||||||||| |||||||||||||||||||||||| |||||||| ||||| || ||||| || |||||||||||| ||| |
|
|
| T |
27435439 |
tgcagcttagtgaaacaatgaacaatctgcaatgctcccttgttcacttgctccctcagaaaatggaacttagcctctatgtgtttgcttcttccaagca |
27435538 |
T |
|
| Q |
422 |
gaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
485 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| ||| ||| |||| ||| |||||||| |
|
|
| T |
27435539 |
aaactggatttcttgctaagcttatagcagatctgttatctttgaacaatgttattggtctgct |
27435602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 45 - 219
Target Start/End: Original strand, 3755664 - 3755838
Alignment:
| Q |
45 |
ttgagtttcttgagaagcaagtcctctctcaaacccaaacaacctaatgataaaatctagcaaaaatgtaactaacttcataacaaacaaaattaacttg |
144 |
Q |
| |
|
||||||| |||||||| ||||| |||||||||||| || ||||||||| |||||||||||||||||||||| |||||||||| |||||||| ||||||| |
|
|
| T |
3755664 |
ttgagttgcttgagaaacaagtgatctctcaaaccctaagaacctaatgctaaaatctagcaaaaatgtaacgaacttcataataaacaaaactaacttg |
3755763 |
T |
|
| Q |
145 |
attactatgtgatcttaaccaaacaaccttgattaagtcactaatcacttattctaacttgaattaacaaactaa |
219 |
Q |
| |
|
|||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3755764 |
attactatgtcatcttaaccaaacaaacttgattaagtcactaatcacttattctaacttgaattaacaaactaa |
3755838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 198 - 428
Target Start/End: Original strand, 17782341 - 17782570
Alignment:
| Q |
198 |
ctaacttgaattaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaat |
297 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||| | ||| |||||||||||||| ||||||||||| ||||||| |||| |
|
|
| T |
17782341 |
ctaacttgaattaacaa-ctaacatcctcccttaattcaagtttccactttcaccataccaatcaagcttcttagcttgatgaacctgtcaaatttcaga |
17782439 |
T |
|
| Q |
298 |
gccttagtgaatatgtttgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgctt |
397 |
Q |
| |
|
| ||| |||| | | | ||| |||||| |||||||| ||||| ||||||| || |||| ||||||| ||||| || || ||||||| | || |||| |
|
|
| T |
17782440 |
ggtttaatgaacaaatctacaatctgcagttcagtagaacaatggacaatcttcaatgcttccttgtttacttgttctctaagaaaatcgattttggctt |
17782539 |
T |
|
| Q |
398 |
ctatatgcttgcttcttccatgcagaactgg |
428 |
Q |
| |
|
| || || |||||||||||||||| |||||| |
|
|
| T |
17782540 |
caatgtgtttgcttcttccatgcaaaactgg |
17782570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 45 - 214
Target Start/End: Original strand, 2601762 - 2601929
Alignment:
| Q |
45 |
ttgagtttcttgagaagcaagtcctctctcaaacccaaacaacctaatgataaaatctagcaaaaatgtaactaacttcataacaaacaaaattaacttg |
144 |
Q |
| |
|
||||||| || ||||| |||||| ||||||||||| ||||||||| || ||||| ||||||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
2601762 |
ttgagttgctcgagaaacaagtcatctctcaaaccttaacaacctagtgctaaaaattagcaaaaatgtaactaactt-tcaacaaacaaaactaacttg |
2601860 |
T |
|
| Q |
145 |
attactatgtgatcttaaccaaacaaccttg-attaagtcactaatcacttattctaacttgaattaacaa |
214 |
Q |
| |
|
|||||||| ||| |||| ||||||| |||| ||||| |||||||||| |||| ||||||||||||||||| |
|
|
| T |
2601861 |
attactatatga--ttaatcaaacaaacttgaattaaatcactaatcaattatgctaacttgaattaacaa |
2601929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 398
Target Start/End: Original strand, 44912831 - 44912931
Alignment:
| Q |
297 |
tgccttagtgaatatgtttgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgct |
396 |
Q |
| |
|
||||||||||||||||| | ||| |||||||||||||| ||||| | ||||| || || || ||||| |||| ||||| ||||||||||||||| || |
|
|
| T |
44912831 |
tgccttagtgaatatgtcaggaagttgcagctcagtagaacaatgga-aatctttagagcccctttgtttacttattccctaagaaaatgaaactttact |
44912929 |
T |
|
| Q |
397 |
tc |
398 |
Q |
| |
|
|| |
|
|
| T |
44912930 |
tc |
44912931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0044 (Bit Score: 253; Significance: 1e-140; HSPs: 1)
Name: scaffold0044
Description:
Target: scaffold0044; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 200 - 485
Target Start/End: Original strand, 44999 - 45286
Alignment:
| Q |
200 |
aacttgaattaa--caaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaat |
297 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
44999 |
aacttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaat |
45098 |
T |
|
| Q |
298 |
gccttagtgaatatgtttgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgctt |
397 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
45099 |
gccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgctt |
45198 |
T |
|
| Q |
398 |
ctatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
485 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45199 |
ctatgtgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
45286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 253; Significance: 1e-140; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 200 - 485
Target Start/End: Complemental strand, 8055415 - 8055128
Alignment:
| Q |
200 |
aacttgaattaa--caaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaat |
297 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8055415 |
aacttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaat |
8055316 |
T |
|
| Q |
298 |
gccttagtgaatatgtttgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgctt |
397 |
Q |
| |
|
|||||||||||||||| ||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
8055315 |
gccttagtgaatatgtctgcaaactgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgctt |
8055216 |
T |
|
| Q |
398 |
ctatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
485 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8055215 |
ctatatgcttgcttcttccatgtagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
8055128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 200 - 485
Target Start/End: Complemental strand, 36675074 - 36674787
Alignment:
| Q |
200 |
aacttgaattaa--caaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaat |
297 |
Q |
| |
|
|||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36675074 |
aacttgaattaaaacaaactaacatcctcccgtaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaat |
36674975 |
T |
|
| Q |
298 |
gccttagtgaatatgtttgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgctt |
397 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||| |
|
|
| T |
36674974 |
gccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgaagtgctcccttgttcacttgctccctcagaaaatggaacttggctt |
36674875 |
T |
|
| Q |
398 |
ctatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
485 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36674874 |
ctatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
36674787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 200 - 485
Target Start/End: Original strand, 35950572 - 35950859
Alignment:
| Q |
200 |
aacttgaattaa--caaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaat |
297 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
35950572 |
aacttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctaagcttgatgaacctgtcaaccttcaat |
35950671 |
T |
|
| Q |
298 |
gccttagtgaatatgtttgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgctt |
397 |
Q |
| |
|
|||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |
|
|
| T |
35950672 |
gccttagtgaatatgtctgcaagctgtagctcagtggagcaatgaacaatctgcagtgctcccttgttcacttgctccctcagaaaatgaaacttggctt |
35950771 |
T |
|
| Q |
398 |
ctatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
485 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||| |
|
|
| T |
35950772 |
ctatatgcttgcttcttccatgcataactggatttattgctaagcttatagcagatttgttgtctatgaacaattatataggtctgct |
35950859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 143 - 215
Target Start/End: Original strand, 4664634 - 4664706
Alignment:
| Q |
143 |
tgattactatgtgatcttaaccaaacaaccttgattaagtcactaatcacttattctaacttgaattaacaaa |
215 |
Q |
| |
|
||||||||| |||||||||| ||||||||||||||||| ||||||| || |||||||||||||||||||||| |
|
|
| T |
4664634 |
tgattactaagtgatcttaatcaaacaaccttgattaaatcactaaacagatattctaacttgaattaacaaa |
4664706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 53 - 214
Target Start/End: Complemental strand, 28447997 - 28447832
Alignment:
| Q |
53 |
cttgagaagcaagtcctctctcaaacccaaacaacctaatgataaaatctagcaaaaa-tgtaactaacttcataacaaacaaaat-----taacttgat |
146 |
Q |
| |
|
|||||||| |||||| |||| ||||||| ||| |||| ||| ||||| | ||||||| |||||| ||||| ||||||||||| | ||||||||| |
|
|
| T |
28447997 |
cttgagaaacaagtcatctcccaaaccctaactaccttatgctaaaagcaagcaaaatctgtaacaaacttt-taacaaacaaattaaaactaacttgat |
28447899 |
T |
|
| Q |
147 |
tactatgtgatcttaaccaaacaaccttgattaagtcactaatcacttattctaacttgaattaacaa |
214 |
Q |
| |
|
|||||| |||| |||||||| | ||||||||| |||||||||| ||| ||||||||||||||||| |
|
|
| T |
28447898 |
tactatatgat-ttaaccaacaagacttgattaaatcactaatcaactatactaacttgaattaacaa |
28447832 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 253; Significance: 1e-140; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 200 - 485
Target Start/End: Complemental strand, 26316036 - 26315749
Alignment:
| Q |
200 |
aacttgaattaa--caaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaat |
297 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26316036 |
aacttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaat |
26315937 |
T |
|
| Q |
298 |
gccttagtgaatatgtttgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgctt |
397 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||| |
|
|
| T |
26315936 |
gccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgaagtgctcccttgttcacttgctccctcagaaaatggaacttggctt |
26315837 |
T |
|
| Q |
398 |
ctatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
485 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26315836 |
ctatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
26315749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 200 - 485
Target Start/End: Original strand, 43591955 - 43592242
Alignment:
| Q |
200 |
aacttgaattaa--caaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaat |
297 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |
|
|
| T |
43591955 |
aacttgaattaaaacaaactaacatcctcccttaattcaagtttctacttccttcattccaatcaagcttttgagcttgatgaacctgtcaaccttcaat |
43592054 |
T |
|
| Q |
298 |
gccttagtgaatatgtttgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgctt |
397 |
Q |
| |
|
|||||||||||||||| |||||| || ||||||||||||||||||||||||| ||| ||||||||||||||||| ||||| | |||||| ||||| |||| |
|
|
| T |
43592055 |
gccttagtgaatatgtctgcaagttgtagctcagtagagcaatgaacaatctacagagctcccttgttcacttggtccctcataaaatggaacttagctt |
43592154 |
T |
|
| Q |
398 |
ctatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
485 |
Q |
| |
|
||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |
|
|
| T |
43592155 |
ttatatgcttgcttctcccatgcagaactgaatttcttgctaagcttatagcagatttgttgtctatgaacaattatataggtctgct |
43592242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 200 - 428
Target Start/End: Complemental strand, 30647385 - 30647158
Alignment:
| Q |
200 |
aacttgaattaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaatgc |
299 |
Q |
| |
|
||||||||||| |||||||||||||||||||| ||||||||||| ||| ||| |||||||||||||| |||||| | || ||| ||| ||||| || |
|
|
| T |
30647385 |
aacttgaattag-aaactaacatcctcccttaaatcaagtttccaattctaccatgccaatcaagcttctaagcttgttaaacctgacaatcttcatagc |
30647287 |
T |
|
| Q |
300 |
cttagtgaatatgtttgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgcttct |
399 |
Q |
| |
|
||||||||| || || |||||||||| ||||| || ||||| |||| || || ||||| ||| | | || ||||| |||||||| ||||||||||| |
|
|
| T |
30647286 |
cttagtgaacatattcgcaagctgcaaatcagtggaacaatggacaacctttagagctcctttggttaactgttccctaagaaaatggaactttgcttca |
30647187 |
T |
|
| Q |
400 |
atatgcttgcttcttccatgcagaactgg |
428 |
Q |
| |
|
|| || ||||| |||||||||| |||||| |
|
|
| T |
30647186 |
atgtgtttgctccttccatgcaaaactgg |
30647158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 90 - 214
Target Start/End: Complemental strand, 9451052 - 9450929
Alignment:
| Q |
90 |
aatgataaaatctagcaaaaatgtaactaacttcataacaaacaaaattaacttgattactatgtgatcttaaccaaacaaccttg-attaagtcactaa |
188 |
Q |
| |
|
|||| ||||| | ||||||| |||||||||||| |||||| ||||| |||||||||||||||||||| |||| ||||||| |||| ||||| ||||||| |
|
|
| T |
9451052 |
aatgctaaaaacaagcaaaactgtaactaacttt-taacaaccaaaactaacttgattactatgtgat-ttaatcaaacaaacttgaattaaatcactaa |
9450955 |
T |
|
| Q |
189 |
tcacttattctaacttgaattaacaa |
214 |
Q |
| |
|
||| |||| |||||||||| |||||| |
|
|
| T |
9450954 |
tcaattatgctaacttgaaataacaa |
9450929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0440 (Bit Score: 249; Significance: 1e-138; HSPs: 2)
Name: scaffold0440
Description:
Target: scaffold0440; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 200 - 485
Target Start/End: Complemental strand, 7529 - 7242
Alignment:
| Q |
200 |
aacttgaattaa--caaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaat |
297 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |
|
|
| T |
7529 |
aacttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaacctttaat |
7430 |
T |
|
| Q |
298 |
gccttagtgaatatgtttgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgctt |
397 |
Q |
| |
|
|||||||||||||||| |||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
7429 |
gccttagtgaatatgtctgcaagctacagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgctt |
7330 |
T |
|
| Q |
398 |
ctatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
485 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7329 |
ctatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
7242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0440; HSP #2
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 200 - 470
Target Start/End: Complemental strand, 3003 - 2731
Alignment:
| Q |
200 |
aacttgaattaa--caaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaat |
297 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |
|
|
| T |
3003 |
aacttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaacctttaat |
2904 |
T |
|
| Q |
298 |
gccttagtgaatatgtttgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgctt |
397 |
Q |
| |
|
|||||||||||||||| |||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||| |
|
|
| T |
2903 |
gccttagtgaatatgtctgcaagcttcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgtaactttgctt |
2804 |
T |
|
| Q |
398 |
ctatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaa |
470 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2803 |
ctatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaa |
2731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 249; Significance: 1e-138; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 200 - 485
Target Start/End: Complemental strand, 44151581 - 44151294
Alignment:
| Q |
200 |
aacttgaattaa--caaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaat |
297 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44151581 |
aacttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaat |
44151482 |
T |
|
| Q |
298 |
gccttagtgaatatgtttgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgctt |
397 |
Q |
| |
|
|||||||||||||||| |||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||| |
|
|
| T |
44151481 |
gccttagtgaatatgtctgcaagctgcagcttagtagaacaatgaacaatctgaagtgctcccttgttcacttgctccctcagaaaatggaacttggctt |
44151382 |
T |
|
| Q |
398 |
ctatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
485 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44151381 |
ctatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
44151294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 210 - 485
Target Start/End: Original strand, 50628076 - 50628351
Alignment:
| Q |
210 |
aacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaatgccttagtgaat |
309 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
50628076 |
aacaaactaacatcctcccttaattcaagtttccactgccttcattccaatcaagcttctgagcttgatgaacctgtcaaccttcaatgccttagtgaat |
50628175 |
T |
|
| Q |
310 |
atgtttgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgcttctatatgcttgc |
409 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
50628176 |
atgtctgcaagctgcagctcagtagagcaatgaacaatctacagtgctcccttgttcacttgctccctcagaaaatgaaacttggcttctatatgcttgc |
50628275 |
T |
|
| Q |
410 |
ttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
485 |
Q |
| |
|
||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
50628276 |
ttcttccatgcggaactgaatttcttgctaagcttatagcagatttgttgtctatgaacaattctataggtctgct |
50628351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 200 - 485
Target Start/End: Original strand, 8892755 - 8893042
Alignment:
| Q |
200 |
aacttgaattaa--caaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaat |
297 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |
|
|
| T |
8892755 |
aacttgaattaaaacaaactaacatcctcccttaattcaaatttccacttccttcattccaatcaaccttttgagcttgatgaatctgtcaaccttcaat |
8892854 |
T |
|
| Q |
298 |
gccttagtgaatatgtttgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgctt |
397 |
Q |
| |
|
|||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||| |||| |
|
|
| T |
8892855 |
gccttagtgaatatgtctgcaagttgcagctcagtagagcaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatggaactcagctt |
8892954 |
T |
|
| Q |
398 |
ctatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
485 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
8892955 |
ctatatgtttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgattaattctataggtctgct |
8893042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 200 - 485
Target Start/End: Complemental strand, 31359174 - 31358888
Alignment:
| Q |
200 |
aacttgaattaa--caaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaat |
297 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
31359174 |
aacttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagct-ctgagcttgatgaacctgtcaaccttcaat |
31359076 |
T |
|
| Q |
298 |
gccttagtgaatatgtttgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgctt |
397 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||| |
|
|
| T |
31359075 |
gccttaatgaatatgtctgcaagctgcagctcagtagagcaatgaacaatctacagtgctcccttgttcacttgctccctcagaaaatgaaacttgactt |
31358976 |
T |
|
| Q |
398 |
ctatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
485 |
Q |
| |
|
|||||||||||||||| ||||||| |||| |||||||| ||||||||||| |||||||||||||||||| |||| ||||||||||||| |
|
|
| T |
31358975 |
ctatatgcttgcttctcccatgcataactagatttctttctaagcttataacagatttgttgtctatgaacaatgctataggtctgct |
31358888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 45 - 221
Target Start/End: Complemental strand, 53977022 - 53976856
Alignment:
| Q |
45 |
ttgagtttcttgagaagcaagtcctctctcaaacccaaacaacctaatgataaaatctagcaaaaatgtaactaacttcataacaaacaaaattaacttg |
144 |
Q |
| |
|
||||||| | |||||| |||||| |||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
53977022 |
ttgagttgcatgagaaacaagtcatctctcaaaccctaacaacctaatgctaaaatctagca----------taacttcataacaaacaaaattaactta |
53976933 |
T |
|
| Q |
145 |
attactatgtgatcttaaccaaacaaccttgattaagtcactaatcacttattctaacttgaattaacaaactaaca |
221 |
Q |
| |
|
|||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||| |
|
|
| T |
53976932 |
attagtatgtgatcttaaccaaacaaacttgattaagtcactaatcatttattctaacttgaattaataaactaaca |
53976856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 125 - 363
Target Start/End: Complemental strand, 29258474 - 29258247
Alignment:
| Q |
125 |
taacaaacaaaattaacttgattacta-tgtgatcttaaccaaacaaccttgattaagtcactaatcacttattctaacttgaattaacaaactaacatc |
223 |
Q |
| |
|
|||||||| ||| ||||| |||||||| |||||| ||||||||||| ||||||||| ||||||| ||||||||||||| ||| |||| ||| |
|
|
| T |
29258474 |
taacaaactaaactaactagattactaatgtgat--taaccaaacaaacttgattaaatcactaa---------ctaacttgaattatcaa-ctaatatc |
29258387 |
T |
|
| Q |
224 |
ctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaatgccttagtgaatatgtttgcaagctg |
323 |
Q |
| |
|
|||||||||||||||||| |||| |||| |||||||||| ||| || ||||| || || ||||| || | | |||||||| | | ||||||||| |
|
|
| T |
29258386 |
ctcccttaattcaagtttaaacttttgtcataccaatcaagcctcttagtttgattaacctttcaacttttagaggtttagtgaacaaatctgcaagctg |
29258287 |
T |
|
| Q |
324 |
cagctcagtagagcaatgaacaatctgcagtgctcccttg |
363 |
Q |
| |
|
||||||||||| ||||||||||||| || |||| ||||| |
|
|
| T |
29258286 |
tagctcagtagaacaatgaacaatcttcaatgcttccttg |
29258247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 197 - 240
Target Start/End: Original strand, 23427806 - 23427848
Alignment:
| Q |
197 |
tctaacttgaattaacaaactaacatcctcccttaattcaagtt |
240 |
Q |
| |
|
||||||||||||||| |||||| ||||||||||||||||||||| |
|
|
| T |
23427806 |
tctaacttgaattaa-aaactagcatcctcccttaattcaagtt |
23427848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 213 - 241
Target Start/End: Complemental strand, 1834115 - 1834087
Alignment:
| Q |
213 |
aaactaacatcctcccttaattcaagttt |
241 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
1834115 |
aaactaacatcctcccttaattcaagttt |
1834087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 245; Significance: 1e-136; HSPs: 11)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 200 - 485
Target Start/End: Original strand, 8315638 - 8315925
Alignment:
| Q |
200 |
aacttgaattaa--caaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaat |
297 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |
|
|
| T |
8315638 |
aacttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaacctttaat |
8315737 |
T |
|
| Q |
298 |
gccttagtgaatatgtttgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgctt |
397 |
Q |
| |
|
|||||||||||||||| |||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
8315738 |
gccttagtgaatatgtctgcaagcttcagctcagtagatcaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgctt |
8315837 |
T |
|
| Q |
398 |
ctatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
485 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8315838 |
ctatatgcttgcttcttccatgcagaactggatttcttgctaaacttatagcagatttgttgtctatgagcaattctataggtctgct |
8315925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 200 - 485
Target Start/End: Original strand, 17886977 - 17887266
Alignment:
| Q |
200 |
aacttgaattaa--caaactaacatcctcccttaattcaagtttccac--ttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttca |
295 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17886977 |
aacttgaattaaaacaaactaacatcctcccttaattcaagtttccacacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttca |
17887076 |
T |
|
| Q |
296 |
atgccttagtgaatatgtttgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgc |
395 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| || || || |
|
|
| T |
17887077 |
atgccttagtgaatatgtctgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgtttacttgctccctcagaaaatggaagttagc |
17887176 |
T |
|
| Q |
396 |
ttctatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
485 |
Q |
| |
|
||||| ||| || |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| |
|
|
| T |
17887177 |
ttctacatgtttacttcttccatgcagaactagatttcttgctaagcttatagctgatttgttgtctatgaacaattctataggtctgct |
17887266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 183; E-Value: 9e-99
Query Start/End: Original strand, 200 - 407
Target Start/End: Original strand, 27552244 - 27552453
Alignment:
| Q |
200 |
aacttgaattaa--caaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaat |
297 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
27552244 |
aacttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatatgtcaaccttcaat |
27552343 |
T |
|
| Q |
298 |
gccttagtgaatatgtttgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgctt |
397 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |
|
|
| T |
27552344 |
gccttagtgaatatgtctgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgtttacttgctcccttagaaaatgaaacttggctt |
27552443 |
T |
|
| Q |
398 |
ctatatgctt |
407 |
Q |
| |
|
|||||||||| |
|
|
| T |
27552444 |
ctatatgctt |
27552453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 213 - 415
Target Start/End: Complemental strand, 17163633 - 17163431
Alignment:
| Q |
213 |
aaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaatgccttagtgaatatg |
312 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17163633 |
aaactaacatcctcccttaattcaagtttccacttccttcataccaatcaagcttctgagcttgatgaatctgtcaaccttcaatgccttagtgaatatg |
17163534 |
T |
|
| Q |
313 |
tttgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgcttctatatgcttgcttc |
412 |
Q |
| |
|
| |||||| |||||||||| |||||||| |||||||||| ||| || |||||||||| |||||| |||||||| |||||||| |||| || ||||||| |
|
|
| T |
17163533 |
tctgcaagaagcagctcagtggagcaatggacaatctgcaatgcacctttgttcactttctccctcagaaaatggaactttgcctctacgtgtttgcttc |
17163434 |
T |
|
| Q |
413 |
ttc |
415 |
Q |
| |
|
||| |
|
|
| T |
17163433 |
ttc |
17163431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 70 - 219
Target Start/End: Original strand, 11421771 - 11421920
Alignment:
| Q |
70 |
ctctcaaacccaaacaacctaatgataaaatctagcaaaaatgtaactaacttcataacaaacaaaattaacttgattactatgtgatcttaaccaaaca |
169 |
Q |
| |
|
|||||||| || |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
11421771 |
ctctcaaatcctaacaacctaatgctaaaatctagcaaaaatgtaactaacttcataacaaacaaaactaacttgattactatgtgatcttaaccaaaca |
11421870 |
T |
|
| Q |
170 |
accttgattaagtcactaatcacttattctaacttgaattaacaaactaa |
219 |
Q |
| |
|
| | ||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
11421871 |
aacatgattaagtcactaatcacttgttctaacttgaattaacaaactaa |
11421920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 45 - 170
Target Start/End: Complemental strand, 33670651 - 33670526
Alignment:
| Q |
45 |
ttgagtttcttgagaagcaagtcctctctcaaacccaaacaacctaatgataaaatctagcaaaaatgtaactaacttcataacaaacaaaattaacttg |
144 |
Q |
| |
|
||||||| |||||||| |||||| |||||||||||| |||||| ||||| ||||||||||||||||||||||||| |||||||||||||||| ||||||| |
|
|
| T |
33670651 |
ttgagttgcttgagaaacaagtcatctctcaaaccctaacaacataatgctaaaatctagcaaaaatgtaactaatttcataacaaacaaaactaacttg |
33670552 |
T |
|
| Q |
145 |
attactatgtgatcttaaccaaacaa |
170 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
33670551 |
attactatgtgatcttaaccaaacaa |
33670526 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 405 - 485
Target Start/End: Original strand, 27568524 - 27568604
Alignment:
| Q |
405 |
cttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
485 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27568524 |
cttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgct |
27568604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 53 - 295
Target Start/End: Complemental strand, 23256544 - 23256303
Alignment:
| Q |
53 |
cttgagaagcaagtcctctctcaaacccaaacaacctaatgataaaatctagcaaaaat-gtaactaacttcataacaaacaa-aattaacttgattact |
150 |
Q |
| |
|
|||||||| |||||| ||||||||| || ||| |||| ||| |||||||||||||||| ||||| |||| ||||| ||| | || |||||| |||| |
|
|
| T |
23256544 |
cttgagaaacaagtcatctctcaaaacctaactaccttatgctaaaatctagcaaaaacagtaacaaacta-ataaccaactataagcaacttggttaca |
23256446 |
T |
|
| Q |
151 |
atgtgatcttaaccaaacaa-ccttgattaagtcactaatcacttattctaacttgaattaacaaactaacatcctcccttaattcaagtttccacttcc |
249 |
Q |
| |
|
||||| | |||||||||||| |||||||||| ||||||||| ||| |||||||||||||| ||| |||||||||||||||||| ||||||| || | |
|
|
| T |
23256445 |
atgtgtt-ttaaccaaacaagccttgattaaaacactaatcaactatactaacttgaattaa--aaccaacatcctcccttaattctggtttccattttc |
23256349 |
T |
|
| Q |
250 |
ttcattccaatcaagcttctgagcttgatgaatctgtcaaccttca |
295 |
Q |
| |
|
|| ||| |||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
23256348 |
accaaaccagtcaagcttcttagcttgatgaacctgtcaaccttca |
23256303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 315 - 460
Target Start/End: Complemental strand, 3596478 - 3596333
Alignment:
| Q |
315 |
tgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgcttctatatgcttgcttctt |
414 |
Q |
| |
|
|||||| |||||||||||||| ||||| ||||||| || |||| |||||| ||||| ||||| ||||| |||||||| ||||| || ||||| || ||| |
|
|
| T |
3596478 |
tgcaagttgcagctcagtagaacaatggacaatcttcaatgcttgcttgtttacttgttccctaagaaagtgaaacttagcttcaatgtgcttcctcctt |
3596379 |
T |
|
| Q |
415 |
ccatgcagaactggatttcttgctaagcttatagcagatttgttgt |
460 |
Q |
| |
|
||||||| ||||||||| || ||||| ||||||| |||||||||| |
|
|
| T |
3596378 |
ccatgcaaaactggattctttactaagtttatagccgatttgttgt |
3596333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 197 - 276
Target Start/End: Original strand, 8855261 - 8855339
Alignment:
| Q |
197 |
tctaacttgaattaacaaactaacatcctcccttaattcaagttt-ccacttccttcattccaatcaagcttctgagcttg |
276 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||| ||| | | ||||||||||||||||||||||||| |
|
|
| T |
8855261 |
tctaacttgaattaa--aactaacatcctcccttaattcaagttttccaacttcaccattccaatcaagcttctgagcttg |
8855339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 198 - 247
Target Start/End: Complemental strand, 3597640 - 3597592
Alignment:
| Q |
198 |
ctaacttgaattaacaaactaacatcctcccttaattcaagtttccactt |
247 |
Q |
| |
|
||||||||||||| ||| ||||||||||||||||||||||||||| |||| |
|
|
| T |
3597640 |
ctaacttgaattatcaa-ctaacatcctcccttaattcaagtttcaactt |
3597592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold0016
Description:
Target: scaffold0016; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 62 - 159
Target Start/End: Complemental strand, 112286 - 112188
Alignment:
| Q |
62 |
caagtcctctctcaaacccaaacaacctaatgataaaatctagcaaaaa-tgtaactaacttcataacaaacaaaattaacttgattactatgtgatct |
159 |
Q |
| |
|
|||||| |||| |||||| || ||||||||| ||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
112286 |
caagtcatctccaaaaccctaataacctaatgctaaaatctaacaaaaaatgtaactaacttcataacaaacaaaactaacttgattactatgtgatct |
112188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0321 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0321
Description:
Target: scaffold0321; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 157
Target Start/End: Original strand, 13887 - 13995
Alignment:
| Q |
48 |
agtttcttgagaagcaagtcctctctcaaacccaaacaacctaatgataaaatctagcaaaaatgtaactaacttcataacaaac-aaaattaacttgat |
146 |
Q |
| |
|
|||| |||||||| |||||| |||||||||||| || |||| ||| ||||| | ||||||| |||||| ||||| |||| ||| |||| ||||||||| |
|
|
| T |
13887 |
agttgcttgagaaacaagtcatctctcaaaccctaattaccttatg-taaaaacaagcaaaactgtaacaaacttt-taacgaaccaaaactaacttgat |
13984 |
T |
|
| Q |
147 |
tactatgtgat |
157 |
Q |
| |
|
||||||||||| |
|
|
| T |
13985 |
tactatgtgat |
13995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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