View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7357_low_7 (Length: 255)
Name: NF7357_low_7
Description: NF7357
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7357_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 10313225 - 10312984
Alignment:
| Q |
1 |
tgtattaaatccatttttaaataatgaaatgatacaattttattcctctcaaaagaatcttatgaagcactacatggttattcccataaaacaaataggg |
100 |
Q |
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| T |
10313225 |
tgtattaaacccatttttaaataatgaaatgatacaattttattcctctcaaaagaatcttatgaagcactacaaggttattcccataaaacaaataggg |
10313126 |
T |
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| Q |
101 |
ttgggtttggatttcatatgcaaaaggaaaaatacttaagtgccgttgtttccaagcaagtacccttataataccgttgtgtgttaaacccaaatatata |
200 |
Q |
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| T |
10313125 |
ttgggtttggatttcatatgcaaacgggaaaatacttaagtgccgttgtttccaagcaagtacccttataataccgttgagtgttaaacccaaatatata |
10313026 |
T |
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| Q |
201 |
aacct-acacactcactcacttgttacaaatacagttcatct |
241 |
Q |
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| T |
10313025 |
aacctaactcactcactcacttgttacaaatacagttcatct |
10312984 |
T |
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