View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7359_high_1 (Length: 707)

Name: NF7359_high_1
Description: NF7359
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7359_high_1
NF7359_high_1
[»] chr4 (55 HSPs)
chr4 (21-332)||(6206905-6207216)
chr4 (334-698)||(6207318-6207684)
chr4 (348-504)||(2654127-2654283)
chr4 (336-506)||(44356544-44356713)
chr4 (343-503)||(20112303-20112463)
chr4 (343-438)||(21597555-21597650)
chr4 (353-503)||(14449447-14449599)
chr4 (343-505)||(1420697-1420860)
chr4 (343-438)||(10059850-10059945)
chr4 (343-438)||(51362605-51362700)
chr4 (343-504)||(2016790-2016952)
chr4 (353-504)||(25909486-25909638)
chr4 (353-509)||(12719608-12719766)
chr4 (378-438)||(27978887-27978947)
chr4 (340-423)||(21322861-21322944)
chr4 (353-500)||(27978695-27978842)
chr4 (348-438)||(8965674-8965764)
chr4 (378-504)||(23759560-23759686)
chr4 (454-511)||(11824180-11824237)
chr4 (353-438)||(47999595-47999680)
chr4 (343-505)||(53312284-53312448)
chr4 (374-438)||(14060887-14060951)
chr4 (449-513)||(19909163-19909227)
chr4 (343-438)||(2836965-2837060)
chr4 (343-438)||(51371529-51371624)
chr4 (455-501)||(3657950-3657996)
chr4 (348-438)||(21871545-21871635)
chr4 (348-438)||(21927406-21927496)
chr4 (452-502)||(21957730-21957780)
chr4 (450-504)||(35383764-35383818)
chr4 (343-425)||(43074741-43074823)
chr4 (449-503)||(43074826-43074880)
chr4 (452-501)||(1420537-1420586)
chr4 (452-505)||(2017051-2017104)
chr4 (452-501)||(14016722-14016771)
chr4 (395-515)||(42526155-42526274)
chr4 (336-425)||(53924897-53924986)
chr4 (450-502)||(35615315-35615367)
chr4 (348-408)||(49185665-49185725)
chr4 (343-438)||(23759727-23759822)
chr4 (343-438)||(31553395-31553490)
chr4 (343-438)||(54983986-54984081)
chr4 (451-505)||(4796034-4796088)
chr4 (343-421)||(4796193-4796271)
chr4 (450-500)||(50769366-50769416)
chr4 (455-505)||(51362806-51362856)
chr4 (333-438)||(6637206-6637311)
chr4 (455-504)||(37832963-37833012)
chr4 (449-510)||(41465404-41465465)
chr4 (450-515)||(43074604-43074669)
chr4 (450-503)||(49185571-49185623)
chr4 (455-507)||(13209724-13209776)
chr4 (456-504)||(21451458-21451506)
chr4 (452-500)||(29697527-29697575)
chr4 (343-435)||(54855373-54855464)
[»] chr6 (26 HSPs)
chr6 (333-504)||(30349348-30349519)
chr6 (333-502)||(6036803-6036971)
chr6 (333-505)||(10727337-10727510)
chr6 (348-507)||(33399782-33399940)
chr6 (333-436)||(32143326-32143429)
chr6 (336-438)||(18031088-18031190)
chr6 (348-438)||(2840966-2841056)
chr6 (374-438)||(2853599-2853663)
chr6 (450-508)||(30349617-30349675)
chr6 (343-432)||(11351707-11351796)
chr6 (349-438)||(20474864-20474952)
chr6 (354-438)||(26311568-26311652)
chr6 (343-438)||(3812806-3812900)
chr6 (378-433)||(5605903-5605958)
chr6 (455-505)||(3812738-3812788)
chr6 (452-505)||(2203185-2203238)
chr6 (333-425)||(5003222-5003314)
chr6 (450-505)||(3579593-3579648)
chr6 (449-503)||(266122-266176)
chr6 (449-483)||(1614171-1614205)
chr6 (378-436)||(6036712-6036770)
chr6 (449-522)||(1377466-1377539)
chr6 (449-522)||(1385214-1385287)
chr6 (450-503)||(4037465-4037518)
chr6 (449-505)||(2164418-2164474)
chr6 (449-505)||(2176051-2176107)
[»] chr2 (39 HSPs)
chr2 (353-504)||(14489213-14489364)
chr2 (333-438)||(34760913-34761018)
chr2 (336-504)||(44617885-44618052)
chr2 (343-506)||(5470490-5470652)
chr2 (343-438)||(2609242-2609337)
chr2 (353-436)||(25411609-25411692)
chr2 (348-438)||(4925505-4925595)
chr2 (333-436)||(41196373-41196476)
chr2 (343-504)||(34679096-34679258)
chr2 (333-438)||(37431609-37431714)
chr2 (374-505)||(24472631-24472760)
chr2 (353-436)||(8857114-8857197)
chr2 (450-504)||(21358366-21358420)
chr2 (348-438)||(37803189-37803278)
chr2 (343-503)||(39918434-39918595)
chr2 (343-503)||(4576696-4576854)
chr2 (333-433)||(5008431-5008531)
chr2 (450-506)||(6592721-6592777)
chr2 (448-504)||(19399434-19399490)
chr2 (454-509)||(14943808-14943863)
chr2 (453-503)||(15022838-15022888)
chr2 (336-438)||(18969240-18969342)
chr2 (343-421)||(19895767-19895845)
chr2 (348-506)||(25333496-25333654)
chr2 (450-504)||(43028793-43028847)
chr2 (357-438)||(32969623-32969704)
chr2 (450-503)||(34679351-34679404)
chr2 (449-505)||(14489470-14489526)
chr2 (450-509)||(5362169-5362228)
chr2 (450-509)||(19206136-19206195)
chr2 (450-505)||(31827523-31827578)
chr2 (456-503)||(37803118-37803165)
chr2 (450-504)||(25379-25433)
chr2 (388-438)||(25451-25501)
chr2 (455-501)||(5362445-5362491)
chr2 (348-438)||(35718711-35718801)
chr2 (333-438)||(24306162-24306267)
chr2 (450-503)||(36176981-36177034)
chr2 (374-438)||(16043206-16043270)
[»] chr5 (35 HSPs)
chr5 (333-504)||(22300600-22300771)
chr5 (343-505)||(27904636-27904799)
chr5 (333-435)||(2974702-2974804)
chr5 (353-433)||(3999261-3999341)
chr5 (343-501)||(20629897-20630057)
chr5 (353-500)||(19131663-19131809)
chr5 (343-504)||(12406193-12406355)
chr5 (343-503)||(3333854-3334015)
chr5 (333-438)||(40276172-40276277)
chr5 (336-424)||(18403066-18403154)
chr5 (450-505)||(12406039-12406094)
chr5 (454-505)||(26562988-26563039)
chr5 (333-504)||(36798169-36798341)
chr5 (343-436)||(20512264-20512357)
chr5 (343-500)||(31080480-31080637)
chr5 (333-438)||(32391862-32391967)
chr5 (353-501)||(37897881-37898029)
chr5 (343-438)||(9852852-9852947)
chr5 (353-425)||(34320110-34320182)
chr5 (455-503)||(40132904-40132952)
chr5 (343-438)||(19340917-19341012)
chr5 (449-500)||(40133139-40133190)
chr5 (454-504)||(36798441-36798491)
chr5 (333-438)||(25910789-25910894)
chr5 (455-507)||(24405486-24405538)
chr5 (448-508)||(32391714-32391774)
chr5 (450-505)||(2974895-2974950)
chr5 (453-508)||(39574234-39574289)
chr5 (343-502)||(43098180-43098337)
chr5 (449-503)||(6131795-6131849)
chr5 (338-436)||(25363893-25363991)
chr5 (343-436)||(26702504-26702596)
chr5 (343-436)||(26972237-26972329)
chr5 (378-438)||(28446192-28446252)
chr5 (456-504)||(40276297-40276345)
[»] chr3 (40 HSPs)
chr3 (343-505)||(51315637-51315800)
chr3 (333-438)||(27178290-27178395)
chr3 (343-438)||(33329770-33329865)
chr3 (343-500)||(44585939-44586097)
chr3 (348-507)||(578571-578729)
chr3 (343-438)||(44436551-44436646)
chr3 (353-502)||(54464163-54464313)
chr3 (357-436)||(8024949-8025028)
chr3 (343-438)||(54719150-54719245)
chr3 (353-438)||(44433227-44433312)
chr3 (343-438)||(48348412-48348506)
chr3 (343-503)||(20432337-20432497)
chr3 (455-508)||(25154447-25154500)
chr3 (374-438)||(38957912-38957976)
chr3 (354-438)||(43747444-43747528)
chr3 (343-502)||(1814710-1814866)
chr3 (336-507)||(1938313-1938484)
chr3 (389-511)||(50802651-50802773)
chr3 (389-511)||(50873104-50873226)
chr3 (372-438)||(7218333-7218399)
chr3 (336-438)||(28204632-28204734)
chr3 (348-438)||(43586719-43586809)
chr3 (451-509)||(44127609-44127667)
chr3 (333-421)||(38177259-38177347)
chr3 (452-508)||(44433329-44433385)
chr3 (343-438)||(19404547-19404642)
chr3 (455-506)||(25902399-25902450)
chr3 (455-514)||(54718983-54719042)
chr3 (336-438)||(47189740-47189842)
chr3 (463-505)||(49787248-49787290)
chr3 (365-438)||(14340909-14340982)
chr3 (452-505)||(14992882-14992935)
chr3 (455-500)||(27178413-27178458)
chr3 (452-505)||(28944228-28944281)
chr3 (343-424)||(36687744-36687825)
chr3 (450-503)||(38177178-38177231)
chr3 (450-506)||(86825-86881)
chr3 (353-425)||(35359075-35359147)
chr3 (449-505)||(35359244-35359300)
chr3 (343-438)||(44624689-44624784)
[»] chr7 (39 HSPs)
chr7 (337-510)||(41243637-41243809)
chr7 (336-437)||(36580421-36580522)
chr7 (448-513)||(23826281-23826346)
chr7 (333-505)||(15107135-15107305)
chr7 (353-505)||(35250117-35250269)
chr7 (343-438)||(18186604-18186699)
chr7 (343-438)||(18504309-18504404)
chr7 (351-504)||(28350115-28350269)
chr7 (333-438)||(36903329-36903433)
chr7 (343-438)||(4049774-4049870)
chr7 (394-438)||(40872351-40872395)
chr7 (452-511)||(5172503-5172562)
chr7 (450-501)||(47909696-47909747)
chr7 (343-421)||(8073957-8074035)
chr7 (451-509)||(17931988-17932046)
chr7 (451-505)||(28786019-28786073)
chr7 (370-436)||(40790574-40790640)
chr7 (360-505)||(3318316-3318460)
chr7 (370-438)||(9500081-9500149)
chr7 (396-505)||(14247511-14247616)
chr7 (343-504)||(15347953-15348111)
chr7 (450-499)||(21505878-21505927)
chr7 (357-502)||(28472391-28472534)
chr7 (414-503)||(36580274-36580363)
chr7 (450-507)||(45697483-45697540)
chr7 (374-438)||(15029127-15029191)
chr7 (354-406)||(26763544-26763596)
chr7 (357-497)||(45717906-45718045)
chr7 (450-509)||(3247432-3247491)
chr7 (391-438)||(3381928-3381975)
chr7 (343-438)||(6726408-6726502)
chr7 (454-505)||(6792061-6792112)
chr7 (454-505)||(15106990-15107041)
chr7 (450-505)||(20505096-20505151)
chr7 (343-438)||(28785908-28786003)
chr7 (450-504)||(4049982-4050036)
chr7 (448-505)||(4049704-4049761)
chr7 (452-504)||(14247293-14247345)
chr7 (451-519)||(36903529-36903596)
[»] chr8 (27 HSPs)
chr8 (343-505)||(30539144-30539306)
chr8 (348-438)||(37813249-37813339)
chr8 (343-505)||(41487363-41487525)
chr8 (353-505)||(20853376-20853527)
chr8 (343-438)||(3676281-3676376)
chr8 (343-504)||(29044700-29044860)
chr8 (450-506)||(28349568-28349624)
chr8 (336-439)||(21486719-21486822)
chr8 (343-503)||(6807322-6807480)
chr8 (353-438)||(16982774-16982858)
chr8 (353-438)||(37939977-37940061)
chr8 (341-438)||(39889924-39890021)
chr8 (333-438)||(45177267-45177372)
chr8 (450-504)||(23702395-23702449)
chr8 (457-505)||(27545342-27545390)
chr8 (340-399)||(36688156-36688215)
chr8 (374-421)||(44269303-44269350)
chr8 (450-500)||(25896993-25897043)
chr8 (376-501)||(26823828-26823954)
chr8 (449-502)||(3676389-3676442)
chr8 (360-505)||(32071185-32071327)
chr8 (450-503)||(36688258-36688311)
chr8 (450-514)||(17070896-17070960)
chr8 (450-514)||(17577312-17577376)
chr8 (390-438)||(29657769-29657817)
chr8 (370-438)||(42218424-42218492)
chr8 (352-436)||(45309483-45309567)
[»] scaffold0194 (1 HSPs)
scaffold0194 (343-513)||(25053-25218)
[»] chr1 (33 HSPs)
chr1 (357-504)||(3377500-3377648)
chr1 (333-503)||(14978797-14978967)
chr1 (414-503)||(3377736-3377825)
chr1 (343-438)||(8301498-8301593)
chr1 (343-437)||(6569660-6569754)
chr1 (333-438)||(23220632-23220737)
chr1 (352-436)||(6320631-6320715)
chr1 (343-502)||(16874656-16874816)
chr1 (348-436)||(44672380-44672468)
chr1 (343-438)||(17760750-17760845)
chr1 (343-425)||(16298210-16298292)
chr1 (348-438)||(39642366-39642456)
chr1 (370-438)||(30849410-30849478)
chr1 (365-500)||(46572830-46572963)
chr1 (333-436)||(46505313-46505416)
chr1 (348-438)||(49426151-49426240)
chr1 (348-420)||(14190700-14190772)
chr1 (454-506)||(15659259-15659311)
chr1 (449-497)||(25085650-25085698)
chr1 (455-499)||(25486217-25486261)
chr1 (448-499)||(6320562-6320613)
chr1 (450-509)||(51250479-51250538)
chr1 (452-506)||(12960843-12960897)
chr1 (450-504)||(17760681-17760735)
chr1 (454-504)||(46573092-46573142)
chr1 (343-421)||(46912344-46912422)
chr1 (333-438)||(12960988-12961093)
chr1 (450-507)||(17692723-17692780)
chr1 (357-438)||(23891802-23891882)
chr1 (451-504)||(39642199-39642252)
chr1 (450-502)||(5287835-5287887)
chr1 (449-505)||(25085397-25085453)
chr1 (450-502)||(42924329-42924381)
[»] scaffold0328 (1 HSPs)
scaffold0328 (357-500)||(9415-9558)
[»] scaffold0248 (1 HSPs)
scaffold0248 (337-438)||(469-570)
[»] scaffold0515 (1 HSPs)
scaffold0515 (450-509)||(3633-3692)
[»] scaffold0306 (1 HSPs)
scaffold0306 (450-509)||(3633-3692)
[»] scaffold0137 (1 HSPs)
scaffold0137 (336-515)||(19902-20081)
[»] scaffold1458 (1 HSPs)
scaffold1458 (450-509)||(1465-1524)
[»] scaffold0015 (1 HSPs)
scaffold0015 (336-438)||(76928-77029)
[»] scaffold0025 (2 HSPs)
scaffold0025 (360-438)||(19199-19277)
scaffold0025 (450-500)||(19602-19652)
[»] scaffold0041 (1 HSPs)
scaffold0041 (394-438)||(93887-93931)
[»] scaffold0578 (1 HSPs)
scaffold0578 (334-433)||(3146-3245)
[»] scaffold0809 (1 HSPs)
scaffold0809 (455-509)||(3023-3077)
[»] scaffold0417 (1 HSPs)
scaffold0417 (336-409)||(9432-9505)
[»] scaffold0047 (1 HSPs)
scaffold0047 (353-402)||(63226-63275)
[»] scaffold0150 (1 HSPs)
scaffold0150 (450-500)||(9558-9608)
[»] scaffold0250 (1 HSPs)
scaffold0250 (452-509)||(3566-3623)
[»] scaffold0735 (1 HSPs)
scaffold0735 (450-502)||(6061-6113)
[»] scaffold0372 (1 HSPs)
scaffold0372 (456-504)||(123-171)
[»] scaffold0286 (1 HSPs)
scaffold0286 (449-505)||(17935-17991)


Alignment Details
Target: chr4 (Bit Score: 268; Significance: 1e-149; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 21 - 332
Target Start/End: Original strand, 6206905 - 6207216
Alignment:
Q  21 tttcattggacaggaggtctccattattaaaatcatccttgtcagcattatatgcatgctttacgaggtatatataatcttctgaaacctatagtcagat 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6206905 tttcattggacaggaggtctccattattaaaatcatccttgtcagcattatatgcatgctttacaaggtatatataatcttctgaaacctatagtcagat 6207004  T
Q  121 tgtatagttaattaatttttatagttttagaaaatgacatctcaccacaattgtggatagagattttgaggtcttcacaattttaatctttaaaactaaa 220  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6207005 tgtatagttaattaattcttatagttttagaaaatgacatctcaccacaattgtggatagagattttgaggtcttcacaattttaatctttaaaactaaa 6207104  T
Q  221 agttaaaaatctttggtgacaacggtgtcaagggttcaaaatctttagtgacagttcagttttattttattggcttaaaaacaattttcgttccctaatt 320  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||| | || |||||| ||||||| |    
T  6207105 agttaaaaatctttggtgacaacggtgtcaagggttcaaaatcattggtgacagtttagttttattttattggcttaatagcagttttcgctccctaact 6207204  T
Q  321 ttatcgaagttg 332  Q
    ||| ||||||||    
T  6207205 ttagcgaagttg 6207216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 334 - 698
Target Start/End: Original strand, 6207318 - 6207684
Alignment:
Q  334 atgtgacatctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggtttt 433  Q
    ||||||||||||| |||||||||||| | | |||| |||||||||||||||   ||||||| ||||| | ||||| ||| |||||||||||| |||||||    
T  6207318 atgtgacatctcacttagagtgccacattagcgtagaccaagtcaaaattgaccttgggggccaaaattgccacaaatgcaaaacttagggggcggtttt 6207417  T
Q  434 gtagtgnnnnnnnna---aggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcctattttattttagtagagaactgtaag 530  Q
    |||||             ||||||||||||||||||||| ||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  6207418 gtagttttttttcttcttaggggccaaaatcacaactttaggaaaattagggggctaaaactgctattaagcctattttattttagtagagaactgtaag 6207517  T
Q  531 tttgtaataacggtgtctatgaaattatacataaattttgtccaagaagtaaaataaagaaaatgatgacgttcacattaacacaattttcctatacttt 630  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  6207518 tttgtaataacggtgtctatgaaattatacataaattttgtccaagaagtaaaataaagaaaatgatgacgttcacattaacac-cttttcctatacttt 6207616  T
Q  631 atttcacaacaaaacgaaaaatttcaagtaaattgatcacaagcatgagttgaggaacttatattctt 698  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6207617 atttcacaacaaaacgaaaaatttcaagtaaattgatcacaagcatgagttgaggaacttatattctt 6207684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 348 - 504
Target Start/End: Original strand, 2654127 - 2654283
Alignment:
Q  348 ttagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagtgnnnnnnnn 447  Q
    |||| ||||||||||| |||| ||||||||||||||||  ||||||||||||||| ||||||||| |||||||||||| | ||||||||||             
T  2654127 ttagggtgccacgtcagcgtagaccaagtcaaaattggccttgggggtcaaaactgccacatatgcaaaacttagggggcagttttgtagtatttttttt 2654226  T
Q  448 aaggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcct 504  Q
    | ||| ||||||| ||||||||||||||||||| || |||||||| |||||||||||    
T  2654227 aggggaccaaaataacaactttgggaaagttaggggcctaaaactactattaagcct 2654283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 336 - 506
Target Start/End: Original strand, 44356544 - 44356713
Alignment:
Q  336 gtgacatctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgt 435  Q
    |||||| |||| |||| ||||||||| | |||| ||||||||||||||||| ||||||| ||||||| ||||||||| |||||||||||| |||||||||    
T  44356544 gtgacacctcacttagggtgccacgttatcgtagaccaagtcaaaattggtcttgggggccaaaactgccacatatgcaaaacttagggggcggttttgt 44356643  T
Q  436 agtgnnnnnnnnaaggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcctat 506  Q
    | |         | | |||||||||| |||||||| ||||||||| || ||||||||||||||||||||||    
T  44356644 aatttttttcttaggcggccaaaatcgcaactttgagaaagttag-gggctaaaactgctattaagcctat 44356713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 343 - 503
Target Start/End: Original strand, 20112303 - 20112463
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagtgnnn 442  Q
    |||| |||||||||||||||| |||  ||| ||||||||||||  ||||||| ||||||| ||||||||| ||||||| |||| ||||||||||||        
T  20112303 ctcacttagagtgccacgtcagcgttgaccgagtcaaaattggctttgggggccaaaactgccacatatgcaaaactttgggggcggttttgtagtattt 20112402  T
Q  443 nnnnnaaggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcc 503  Q
           |||||||||||| ||||||||| ||||||||| | ||||||||| |||||||||    
T  20112403 ttctttgggggccaaaatcgcaactttggaaaagttagaaggctaaaactgttattaagcc 20112463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 343 - 438
Target Start/End: Original strand, 21597555 - 21597650
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    |||| |||| ||||||||||| |||| ||| |||||||||| || ||||||| ||||||| ||||||||| |||| ||||||||||||||||||||    
T  21597555 ctcatttagggtgccacgtcagcgtagaccgagtcaaaattagttttgggggccaaaactgccacatatgcaaaatttaggggacggttttgtagt 21597650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 353 - 503
Target Start/End: Original strand, 14449447 - 14449599
Alignment:
Q  353 gtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtag--tgnnnnnnnnaag 450  Q
    ||||||||||| |||||||| ||||||||||||  ||||||| ||||||| ||||| ||| |||||||||||  |||||||||||  |         |||    
T  14449447 gtgccacgtcagcgtaaaccgagtcaaaattggccttgggggccaaaactgccacaaatgcaaaacttagggagcggttttgtagttttttttccttaag 14449546  T
Q  451 gggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcc 503  Q
     |||||||||| ||||||||| |||||||| || |||||||| ||||||||||    
T  14449547 aggccaaaatcgcaactttggaaaagttagggggctaaaactactattaagcc 14449599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 343 - 505
Target Start/End: Original strand, 1420697 - 1420860
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagtgnnn 442  Q
    |||| |||| ||||||||||| |||  ||| ||||||||||||  |||||||||| |||| ||||| ||| |||||||| ||| ||||||||||||        
T  1420697 ctcacttagggtgccacgtcagcgttgaccgagtcaaaattggccttgggggtcataactgccacaaatgcaaaacttatggggcggttttgtagttctt 1420796  T
Q  443 nnnnnaagggg-ccaaaatcacaactttgggaaagttagaggactaaaactgctattaagccta 505  Q
          ||||| ||||||||  ||||||||||||||||  || |||||||||||||||||||||    
T  1420797 tttcttaggggaccaaaatcgtaactttgggaaagttaaggggctaaaactgctattaagccta 1420860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 343 - 438
Target Start/End: Original strand, 10059850 - 10059945
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    |||| |||| |||||||||||||||| ||| ||||||||||||  ||| ||| ||||||| ||||| ||| |||||||||||| ||||||||||||    
T  10059850 ctcacttagggtgccacgtcaacgtagaccgagtcaaaattggccttgagggccaaaactgccacagatgcaaaacttagggggcggttttgtagt 10059945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 343 - 438
Target Start/End: Complemental strand, 51362700 - 51362605
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    |||| |||| |||||||||||  ||| ||  ||||||||||||| ||||||| ||||||| ||||||||| |||||||||||| ||||||||||||    
T  51362700 ctcacttagggtgccacgtcagtgtagactgagtcaaaattggtcttgggggccaaaactgccacatatgcaaaacttagggggcggttttgtagt 51362605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 343 - 504
Target Start/End: Complemental strand, 2016952 - 2016790
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagtgnnn 442  Q
    |||| |||| ||||||||||| |||| ||| ||||||||||||  ||||||| ||||||| |||||| || |||||||||||| | ||||||||||        
T  2016952 ctcacttagggtgccacgtcagcgtagaccgagtcaaaattggccttgggggccaaaactgccacatgtgcaaaacttagggggcagttttgtagtcttt 2016853  T
Q  443 nnnnnaag-gggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcct 504  Q
           | ||||||||||| ||||||||| |||||||| || ||||||||||||| ||||||    
T  2016852 tttctttgagggccaaaatcgcaactttggaaaagttagggggctaaaactgctatcaagcct 2016790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 353 - 504
Target Start/End: Complemental strand, 25909638 - 25909486
Alignment:
Q  353 gtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagtgnnnnnnnnaaggg 452  Q
    ||||||||||| |||| ||| ||||||||||||  ||||||| ||||||  |||||  || |||||||||||| ||||||| ||||          ||||    
T  25909638 gtgccacgtcagcgtagaccgagtcaaaattggccttgggggccaaaacctccacaagtgcaaaacttagggggcggttttatagttttttttcttaggg 25909539  T
Q  453 g-ccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcct 504  Q
    | |||||||||||||||||| |||||||| ||  |||||||||||||||||||    
T  25909538 ggccaaaatcacaactttggaaaagttagggggttaaaactgctattaagcct 25909486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 353 - 509
Target Start/End: Original strand, 12719608 - 12719766
Alignment:
Q  353 gtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtag--tgnnnnnnnnaag 450  Q
    ||||||| ||| |||| ||| ||||||||||||| |||| || ||||||| ||||| ||| ||||||||||||  ||||||||||  |         | |    
T  12719608 gtgccacatcagcgtagaccgagtcaaaattggtcttggaggccaaaactgccacagatgcaaaacttagggggtggttttgtagtttttttttcttagg 12719707  T
Q  451 gggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcctatttt 509  Q
    ||||||||||  |||||||||||||||||| ||  ||||||||||||||||||| ||||    
T  12719708 gggccaaaatatcaactttgggaaagttagggggttaaaactgctattaagcctttttt 12719766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 378 - 438
Target Start/End: Original strand, 27978887 - 27978947
Alignment:
Q  378 aaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    ||||||||||||||||||||||||| | | |  ||||||||||||||||||||||||||||    
T  27978887 aaaattggtattgggggtcaaaactgctagagttgtaaaacttaggggacggttttgtagt 27978947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 340 - 423
Target Start/End: Original strand, 21322861 - 21322944
Alignment:
Q  340 catctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttagg 423  Q
    ||||||| |||||||| | ||| | |||| ||| |||||||||||| ||||||||||||||||  |||||||| ||||||||||    
T  21322861 catctcatttagagtgtcgcgttagcgtagaccgagtcaaaattggcattgggggtcaaaactgtcacatatgcaaaacttagg 21322944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 353 - 500
Target Start/End: Complemental strand, 27978842 - 27978695
Alignment:
Q  353 gtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagtgnnnnnnnnaaggg 452  Q
    ||||||||||| |||| ||| ||||||||||||  ||||||||||||||| ||||| ||| ||||||||   | | |||||||| |         | |||    
T  27978842 gtgccacgtcagcgtagaccgagtcaaaattggccttgggggtcaaaactgccacaaatgcaaaacttatatggcagttttgtaatttttttcttagggg 27978743  T
Q  453 gccaaaatcacaactttgggaaagttagaggactaaaactgctattaa 500  Q
    | ||||||| |||||||| |||||||||||| || |||||||||||||    
T  27978742 gtcaaaatcgcaactttgagaaagttagagggcttaaactgctattaa 27978695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 348 - 438
Target Start/End: Original strand, 8965674 - 8965764
Alignment:
Q  348 ttagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    |||| ||||||| |||||||| ||| |||||||||||  |||||||  ||||||| ||||| ||| |||||||||||| ||||||| ||||    
T  8965674 ttagggtgccacatcaacgtagaccgagtcaaaattgacattggggaccaaaactgccacagatgcaaaacttagggggcggttttatagt 8965764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 378 - 504
Target Start/End: Complemental strand, 23759686 - 23759560
Alignment:
Q  378 aaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagtgnnnnnnnnaaggggccaaaatcacaactttgggaaagt 477  Q
    ||||||||  ||||||| ||||||||| |||  || |||| ||||||||||||||||||||         |||||||||||||| |||||||  ||||||    
T  23759686 aaaattggccttgggggccaaaactactacagttgcaaaatttaggggacggttttgtagtttttttcttaaggggccaaaatcgcaactttatgaaagt 23759587  T
Q  478 tagaggactaaaactgctattaagcct 504  Q
    ||| || | |||||| |||||||||||    
T  23759586 tagggggcgaaaactactattaagcct 23759560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 454 - 511
Target Start/End: Complemental strand, 11824237 - 11824180
Alignment:
Q  454 ccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcctattttat 511  Q
    |||||||||||||||| |||||||||| ||  ||||||||||||||||||||| ||||    
T  11824237 ccaaaatcacaactttaggaaagttagggggttaaaactgctattaagcctatattat 11824180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 353 - 438
Target Start/End: Complemental strand, 47999680 - 47999595
Alignment:
Q  353 gtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    ||||||||||| |||| ||| | ||||||||||  || |||||||||||| ||||| |||||||||||| ||  ||||||||||||    
T  47999680 gtgccacgtcagcgtagaccgaatcaaaattggccttaggggtcaaaactgccacagatgtaaaacttatggagcggttttgtagt 47999595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 343 - 505
Target Start/End: Complemental strand, 53312448 - 53312284
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt--gn 440  Q
    |||| |||| ||||||||||| |||| ||  |||| |||||||  ||||||| ||||||| |||||| || |||| |||||||  |||||||||||  |     
T  53312448 ctcacttagggtgccacgtcagcgtagactgagtccaaattggccttgggggccaaaactgccacatgtgcaaaatttagggggtggttttgtagtttgt 53312349  T
Q  441 nnnnnnnaaggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagccta 505  Q
           | |||||||||||| ||||||||  |||||||| || |||||| ||||||||||||||    
T  53312348 ttttcttagggggccaaaatcgcaactttgaaaaagttagggggctaaaaatgctattaagccta 53312284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 374 - 438
Target Start/End: Original strand, 14060887 - 14060951
Alignment:
Q  374 agtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    |||||||||| |  ||||||| ||||||| ||||| |||||||||||||||||| ||||||||||    
T  14060887 agtcaaaattagccttgggggccaaaactgccacagatgtaaaacttaggggacagttttgtagt 14060951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 449 - 513
Target Start/End: Complemental strand, 19909227 - 19909163
Alignment:
Q  449 aggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcctattttattt 513  Q
    ||||||||||||| |||||||| ||||||||| ||  ||||||||||||||||||| || |||||    
T  19909227 aggggccaaaatcgcaactttgagaaagttagggggttaaaactgctattaagccttttgtattt 19909163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 343 - 438
Target Start/End: Complemental strand, 2837060 - 2836965
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    |||| |||| |||||||||||  ||| ||  ||||||||||||  ||||||| |||||||  |||| ||| |||||||||||| ||||||||||||    
T  2837060 ctcacttagggtgccacgtcagtgtagactgagtcaaaattggccttgggggccaaaactctcacacatgcaaaacttagggggcggttttgtagt 2836965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 343 - 438
Target Start/End: Complemental strand, 51371624 - 51371529
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    |||| |||| |||||||||||  ||| ||| |||||||||||  |||||||||||||||| ||| ||||| |||||||| ||| |  |||||||||    
T  51371624 ctcatttagggtgccacgtcagtgtagaccgagtcaaaattgacattgggggtcaaaactgccatatatgcaaaacttaaggggcaattttgtagt 51371529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 455 - 501
Target Start/End: Complemental strand, 3657996 - 3657950
Alignment:
Q  455 caaaatcacaactttgggaaagttagaggactaaaactgctattaag 501  Q
    ||||||||||||||||||||||||||| |  ||||||||||||||||    
T  3657996 caaaatcacaactttgggaaagttagaaggttaaaactgctattaag 3657950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 348 - 438
Target Start/End: Original strand, 21871545 - 21871635
Alignment:
Q  348 ttagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    |||||||| || |||| |||| ||| ||| ||||||| | ||||||| ||||||||||| | ||| |||||||||| | ||||||||||||    
T  21871545 ttagagtgtcatgtcagcgtagaccgagttaaaattgattttgggggccaaaactaccaaagatgcaaaacttaggaggcggttttgtagt 21871635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 348 - 438
Target Start/End: Original strand, 21927406 - 21927496
Alignment:
Q  348 ttagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    |||||||| || |||| |||| ||| ||| ||||||| | ||||||| ||||||||||| | ||| |||||||||| | ||||||||||||    
T  21927406 ttagagtgtcatgtcagcgtagaccgagttaaaattgattttgggggccaaaactaccaaagatgcaaaacttaggaggcggttttgtagt 21927496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 452 - 502
Target Start/End: Original strand, 21957730 - 21957780
Alignment:
Q  452 ggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagc 502  Q
    |||||||||| ||||||||| |||||||| || ||||||||||||||||||    
T  21957730 ggccaaaatcgcaactttggaaaagttagggggctaaaactgctattaagc 21957780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 450 - 504
Target Start/End: Complemental strand, 35383818 - 35383764
Alignment:
Q  450 ggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcct 504  Q
    ||||||||||||||||||| | ||||||||| || | ||||||||||||||||||    
T  35383818 ggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaagcct 35383764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 343 - 425
Target Start/End: Original strand, 43074741 - 43074823
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttagggg 425  Q
    |||| |||| ||||||||||| |||| ||  ||||||||||||  ||||||| ||||||| ||||| ||| ||||||||||||    
T  43074741 ctcacttagggtgccacgtcagcgtagactgagtcaaaattggccttgggggccaaaactgccacagatgcaaaacttagggg 43074823  T

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Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 449 - 503
Target Start/End: Original strand, 43074826 - 43074880
Alignment:
Q  449 aggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcc 503  Q
    ||||| ||||||| |||||||||||||||||| || |||||| ||||||||||||    
T  43074826 aggggtcaaaatcgcaactttgggaaagttagggggctaaaattgctattaagcc 43074880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 452 - 501
Target Start/End: Complemental strand, 1420586 - 1420537
Alignment:
Q  452 ggccaaaatcacaactttgggaaagttagaggactaaaactgctattaag 501  Q
    |||||||||| ||||||||| |||||||| || |||||||||||||||||    
T  1420586 ggccaaaatcgcaactttggaaaagttagggggctaaaactgctattaag 1420537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 452 - 505
Target Start/End: Original strand, 2017051 - 2017104
Alignment:
Q  452 ggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagccta 505  Q
    |||||||||| ||||||| |||||||||  || |||||||||||||||||||||    
T  2017051 ggccaaaatcgcaactttaggaaagttatggggctaaaactgctattaagccta 2017104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 452 - 501
Target Start/End: Complemental strand, 14016771 - 14016722
Alignment:
Q  452 ggccaaaatcacaactttgggaaagttagaggactaaaactgctattaag 501  Q
    |||||||||| |||||||||||||||||| || ||||||| |||||||||    
T  14016771 ggccaaaatcgcaactttgggaaagttagggggctaaaaccgctattaag 14016722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 395 - 515
Target Start/End: Original strand, 42526155 - 42526274
Alignment:
Q  395 tcaaaactaccacatatgtaaaacttaggggacggttttgtagtgnnnnnnnnaaggggccaaaatcacaactttgggaaagttagaggactaaaactgc 494  Q
    |||||||| ||||||||| |||||||| ||||||||||||||||         | ||||| |||||| |||||||  ||||||||| ||  |||||||||    
T  42526155 tcaaaactgccacatatgcaaaacttatgggacggttttgtagt--tttttttatggggcaaaaatcgcaactttaagaaagttagggggttaaaactgc 42526252  T
Q  495 tatt-aagcctattttatttta 515  Q
    |||| ||||||||||| |||||    
T  42526253 tattaaagcctattttttttta 42526274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 336 - 425
Target Start/End: Original strand, 53924897 - 53924986
Alignment:
Q  336 gtgacatctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttagggg 425  Q
    ||||||||||| |||| ||| ||| |||||||| ||| |||||||||||   ||| |||||||||||  |||| ||| ||||||||||||    
T  53924897 gtgacatctcacttagggtgtcacatcaacgtagaccgagtcaaaattgaccttgagggtcaaaactgtcacaaatgcaaaacttagggg 53924986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 450 - 502
Target Start/End: Complemental strand, 35615367 - 35615315
Alignment:
Q  450 ggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagc 502  Q
    |||||||||||| ||||||| | |||||||| || ||||||||||||||||||    
T  35615367 ggggccaaaatcgcaactttagaaaagttagggggctaaaactgctattaagc 35615315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 348 - 408
Target Start/End: Complemental strand, 49185725 - 49185665
Alignment:
Q  348 ttagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccaca 408  Q
    |||| ||||||||||| |||| ||||||||||||||||  ||||||| ||||||| |||||    
T  49185725 ttagggtgccacgtcagcgtagaccaagtcaaaattggccttgggggccaaaactgccaca 49185665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 343 - 438
Target Start/End: Original strand, 23759727 - 23759822
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    |||| |||| ||||||||||| | || | | ||||||||||||  |||| || |||||||  |||| ||  |||||||||||||||||||||||||    
T  23759727 ctcacttagggtgccacgtcagcttagatcgagtcaaaattggccttggaggccaaaactgtcacagatacaaaacttaggggacggttttgtagt 23759822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 343 - 438
Target Start/End: Original strand, 31553395 - 31553490
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    |||| |||| ||||| ||| | |||| ||| ||||||||||||  ||||||| ||||||| ||| | |||||||| ||||||| || |||||||||    
T  31553395 ctcacttagggtgccgcgttagcgtagaccgagtcaaaattggccttgggggccaaaactgccatagatgtaaaatttagggggcgattttgtagt 31553490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 343 - 438
Target Start/End: Original strand, 54983986 - 54984081
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    |||| |||| ||||||||||| |||| |||||| ||||||||  |||||| | |||||||  ||||| || |||| ||||||| || |||||||||    
T  54983986 ctcacttagggtgccacgtcagcgtagaccaagccaaaattgacattgggtgccaaaactgacacatgtgcaaaatttagggggcgattttgtagt 54984081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 451 - 505
Target Start/End: Complemental strand, 4796088 - 4796034
Alignment:
Q  451 gggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagccta 505  Q
    ||||||||||| ||| ||||  |||||||| ||||||||| ||||||||||||||    
T  4796088 gggccaaaatcgcaattttgaaaaagttaggggactaaaaatgctattaagccta 4796034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 343 - 421
Target Start/End: Original strand, 4796193 - 4796271
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaactta 421  Q
    |||| |||| ||||||||||| |||| ||| ||||||||||| | ||||||| ||||||| |||||  || ||||||||    
T  4796193 ctcacttagggtgccacgtcagcgtagaccgagtcaaaattgattttgggggccaaaactgccacaggtgcaaaactta 4796271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 450 - 500
Target Start/End: Complemental strand, 50769416 - 50769366
Alignment:
Q  450 ggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaa 500  Q
    |||| ||||||| |||||||||||||||||| ||  |||||||||||||||    
T  50769416 gggggcaaaatcgcaactttgggaaagttagggggataaaactgctattaa 50769366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 455 - 505
Target Start/End: Original strand, 51362806 - 51362856
Alignment:
Q  455 caaaatcacaactttgggaaagttagaggactaaaactgctattaagccta 505  Q
    ||||||||||||||||  |||||||| |||| |||||||||||||| ||||    
T  51362806 caaaatcacaactttgtaaaagttaggggacgaaaactgctattaaaccta 51362856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 333 - 438
Target Start/End: Original strand, 6637206 - 6637311
Alignment:
Q  333 catgtgacatctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttt 432  Q
    |||||| || |||| |||| |||||| ||||  ||| ||| |||||||||||| |||| ||| ||||||| ||| | ||| |||||||| ||| || |||    
T  6637206 catgtggcacctcacttagggtgccatgtcagtgtagaccgagtcaaaattggcattgtgggccaaaactgccagaaatgcaaaacttaaggggcgattt 6637305  T
Q  433 tgtagt 438  Q
    ||||||    
T  6637306 tgtagt 6637311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 455 - 504
Target Start/End: Original strand, 37832963 - 37833012
Alignment:
Q  455 caaaatcacaactttgggaaagttagaggactaaaactgctattaagcct 504  Q
    ||||||| ||||||| ||||||||||  | ||||||||||||||||||||    
T  37832963 caaaatcgcaactttaggaaagttaggaggctaaaactgctattaagcct 37833012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 449 - 510
Target Start/End: Complemental strand, 41465465 - 41465404
Alignment:
Q  449 aggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcctatttta 510  Q
    ||||||||||||||||||||||| ||| ||||  ||| |||| ||  |||||||||||||||    
T  41465465 aggggccaaaatcacaactttggaaaacttaggagaccaaaagtgtaattaagcctatttta 41465404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 450 - 515
Target Start/End: Complemental strand, 43074669 - 43074604
Alignment:
Q  450 ggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcctattttatttta 515  Q
    |||||||||||| |||||| | ||||||||| || | |||| ||||||||||||| || |||||||    
T  43074669 ggggccaaaatcgcaacttcgtgaaagttagggggcgaaaattgctattaagccttttatatttta 43074604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 450 - 503
Target Start/End: Complemental strand, 49185623 - 49185571
Alignment:
Q  450 ggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcc 503  Q
    |||||||||||| |||||| ||||||||||| ||  ||||||||||||||||||    
T  49185623 ggggccaaaatcgcaactt-gggaaagttagggggttaaaactgctattaagcc 49185571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 455 - 507
Target Start/End: Original strand, 13209724 - 13209776
Alignment:
Q  455 caaaatcacaactttgggaaagttagaggactaaaactgctattaagcctatt 507  Q
    ||||||| ||||||| ||||||||||||| | |||| ||| ||||||||||||    
T  13209724 caaaatcgcaacttttggaaagttagagggccaaaagtgcaattaagcctatt 13209776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 456 - 504
Target Start/End: Complemental strand, 21451506 - 21451458
Alignment:
Q  456 aaaatcacaactttgggaaagttagaggactaaaactgctattaagcct 504  Q
    |||||| |||||||| |||||||||  | ||||||||||||||||||||    
T  21451506 aaaatcgcaactttgagaaagttaggaggctaaaactgctattaagcct 21451458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 452 - 500
Target Start/End: Complemental strand, 29697575 - 29697527
Alignment:
Q  452 ggccaaaatcacaactttgggaaagttagaggactaaaactgctattaa 500  Q
    |||||||||| ||||||||  ||  ||||||||||||||||||||||||    
T  29697575 ggccaaaatcgcaactttgataattttagaggactaaaactgctattaa 29697527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 343 - 435
Target Start/End: Complemental strand, 54855464 - 54855373
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgt 435  Q
    |||| |||| ||||||||||| |||| ||| ||||||||||||  ||||||  ||||||||||| | ||| |||||||| ||| | |||||||    
T  54855464 ctcacttagggtgccacgtcagcgtagaccgagtcaaaattggctttggggaccaaaactacca-agatgcaaaacttaaggggcagttttgt 54855373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 2e-32; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 333 - 504
Target Start/End: Complemental strand, 30349519 - 30349348
Alignment:
Q  333 catgtgacatctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttt 432  Q
    |||||| || |||| |||| |||||||||||||||| ||| ||||| ||||||  ||||||||||||||||||||| ||| |||||||| ||| ||||||    
T  30349519 catgtggcacctcacttagggtgccacgtcaacgtagaccgagtcataattggccttgggggtcaaaactaccacagatgcaaaacttaaggggcggttt 30349420  T
Q  433 tgtagtgnnnnnnnnaaggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcct 504  Q
    ||||||         | |||  ||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  30349419 tgtagtttttttcttaggggctcaaaatcgcaactttgggaaagttagagggctaaaactgctattaagcct 30349348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 333 - 502
Target Start/End: Original strand, 6036803 - 6036971
Alignment:
Q  333 catgtgacatctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttt 432  Q
    |||||| || |||| |||| ||| ||||||| | |||||||||||||||||||  ||||||||||||||| ||||||||| |||||||||||||| ||||    
T  6036803 catgtggcacctcacttagggtgtcacgtcagcataaaccaagtcaaaattggctttgggggtcaaaactgccacatatgcaaaacttaggggacagttt 6036902  T
Q  433 tgtagtgnnnnnnnnaaggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagc 502  Q
    ||||||         | | |||||||||| ||||||| | |||||||| || ||||||||||||||||||    
T  6036903 tgtagttttcttcttaggaggccaaaatcgcaactttagaaaagttag-gggctaaaactgctattaagc 6036971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 333 - 505
Target Start/End: Original strand, 10727337 - 10727510
Alignment:
Q  333 catgtgacatctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttt 432  Q
    |||||| ||||||| |||| || |||||||| |||| | ||||||||||||||  ||||||| ||||||| ||||| ||| |||||||||||| ||||||    
T  10727337 catgtggcatctcacttagggtcccacgtcagcgtagatcaagtcaaaattggccttgggggccaaaactgccacagatgcaaaacttagggggcggttt 10727436  T
Q  433 tgtag-tgnnnnnnnnaaggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagccta 505  Q
    ||||| |         | |||||||||||||||||||||| |||||||| || ||||||||||||||| |||||    
T  10727437 tgtagttttttttcttagggggccaaaatcacaactttggaaaagttagggggctaaaactgctattatgccta 10727510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 348 - 507
Target Start/End: Complemental strand, 33399940 - 33399782
Alignment:
Q  348 ttagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagtgnnnnnnnn 447  Q
    |||| ||||||||||| |||| ||| |||||||||||   || |||| ||||||| ||||| |||||||||||||||  ||||||||||||             
T  33399940 ttagggtgccacgtcagcgtagaccgagtcaaaattgaccttaggggccaaaactgccacaaatgtaaaacttagggtccggttttgtagtttttttctt 33399841  T
Q  448 aaggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcctatt 507  Q
    |  ||||||||||| ||||||||| |||||||| || |||||||||||||||||||||||    
T  33399840 agagggccaaaatcgcaactttggaaaagttag-gggctaaaactgctattaagcctatt 33399782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 333 - 436
Target Start/End: Complemental strand, 32143429 - 32143326
Alignment:
Q  333 catgtgacatctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttt 432  Q
    |||||| || |||| |||||||||||| |||||||| ||| ||||||||||||| ||||||| ||||||| |||||  || |||||||| ||| ||||||    
T  32143429 catgtgccacctcacttagagtgccacatcaacgtagaccgagtcaaaattggtcttgggggccaaaactgccacaggtgcaaaacttaaggggcggttt 32143330  T
Q  433 tgta 436  Q
    ||||    
T  32143329 tgta 32143326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 336 - 438
Target Start/End: Original strand, 18031088 - 18031190
Alignment:
Q  336 gtgacatctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgt 435  Q
    |||||| |||| |||| ||||||||||| |||| ||||||||||||||| | ||| ||| |||||||| |||| ||  |||||||| |||||||||||||    
T  18031088 gtgacacctcacttagggtgccacgtcagcgtagaccaagtcaaaattgatcttgagggccaaaactatcacaaatacaaaacttaagggacggttttgt 18031187  T
Q  436 agt 438  Q
    |||    
T  18031188 agt 18031190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 348 - 438
Target Start/End: Original strand, 2840966 - 2841056
Alignment:
Q  348 ttagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    |||| |||||||||||||||| | | ||||||||||||| ||| ||| ||||||| ||||| ||| |||||||| ||||| ||||||||||    
T  2840966 ttagggtgccacgtcaacgtagagcgagtcaaaattggttttgcgggccaaaactgccacaaatgcaaaacttatgggactgttttgtagt 2841056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 374 - 438
Target Start/End: Original strand, 2853599 - 2853663
Alignment:
Q  374 agtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    ||||||||||||  ||||||| ||||||| ||||||||| |||||||||||| ||||||||||||    
T  2853599 agtcaaaattggccttgggggccaaaactgccacatatgaaaaacttagggggcggttttgtagt 2853663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 450 - 508
Target Start/End: Original strand, 30349617 - 30349675
Alignment:
Q  450 ggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcctattt 508  Q
    |||||||||||| ||||||||  |||||||| |||| ||||||||||||||||||||||    
T  30349617 ggggccaaaatcgcaactttgaaaaagttaggggacaaaaactgctattaagcctattt 30349675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 343 - 432
Target Start/End: Complemental strand, 11351796 - 11351707
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttt 432  Q
    |||| |||| ||||||||||| |||| ||| |||||||||||| |||||||   |||||| ||| ||||||||||||| | |||||||||    
T  11351796 ctcacttagggtgccacgtcagcgtagaccgagtcaaaattggcattggggacgaaaactgccatatatgtaaaactttgtggacggttt 11351707  T

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Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 349 - 438
Target Start/End: Original strand, 20474864 - 20474952
Alignment:
Q  349 tagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    |||| ||||||||||||||| ||| |||||| ||||  |||||||| ||||||| ||||| ||| |||||||||||| | ||||||||||    
T  20474864 tagactgccacgtcaacgtataccgagtcaacattgacattgggggccaaaactgccacagatgcaaaacttagggggc-gttttgtagt 20474952  T

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Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 354 - 438
Target Start/End: Original strand, 26311568 - 26311652
Alignment:
Q  354 tgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    |||||||||| |||| ||| |||||||||||   ||||||| ||||||| ||||||||| |||||||| |||  |||||||||||    
T  26311568 tgccacgtcagcgtagaccgagtcaaaattgaccttgggggccaaaactgccacatatgcaaaacttaaggggtggttttgtagt 26311652  T

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Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 343 - 438
Target Start/End: Complemental strand, 3812900 - 3812806
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    |||| |||| ||||||||||| |||| |||  |||||||||||| ||||||  ||||||| ||||||||| ||||||||||| ||  |||||||||    
T  3812900 ctcacttagggtgccacgtcagcgtagaccgggtcaaaattggtcttggggc-caaaactgccacatatgcaaaacttagggaactcttttgtagt 3812806  T

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Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 378 - 433
Target Start/End: Complemental strand, 5605958 - 5605903
Alignment:
Q  378 aaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggtttt 433  Q
    ||||||||| ||| ||||||||||| ||||| |||||||||||||||| |||||||    
T  5605958 aaaattggttttgagggtcaaaactgccacaaatgtaaaacttagggggcggtttt 5605903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 455 - 505
Target Start/End: Complemental strand, 3812788 - 3812738
Alignment:
Q  455 caaaatcacaactttgggaaagttagaggactaaaactgctattaagccta 505  Q
    ||||||||||||||| ||||||||||||   ||||||||||||||||||||    
T  3812788 caaaatcacaactttaggaaagttagagagttaaaactgctattaagccta 3812738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 452 - 505
Target Start/End: Complemental strand, 2203238 - 2203185
Alignment:
Q  452 ggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagccta 505  Q
    |||||||||| |||||||||||||||||| |  |||||| ||||||||||||||    
T  2203238 ggccaaaatcgcaactttgggaaagttagggagctaaaattgctattaagccta 2203185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 333 - 425
Target Start/End: Original strand, 5003222 - 5003314
Alignment:
Q  333 catgtgacatctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttagggg 425  Q
    ||||||||| |||| |||| ||| ||||||| |||| ||||||| |||||||  |||||| | ||||||| |||||  || ||||||||||||    
T  5003222 catgtgacacctcacttagggtgtcacgtcagcgtagaccaagttaaaattgacattgggagccaaaactgccacaattgcaaaacttagggg 5003314  T

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Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 450 - 505
Target Start/End: Complemental strand, 3579648 - 3579593
Alignment:
Q  450 ggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagccta 505  Q
    |||||||||||| |||||| | ||||||||  |||| |||||||||||||||||||    
T  3579648 ggggccaaaatcgcaacttcgtgaaagttaagggacgaaaactgctattaagccta 3579593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 449 - 503
Target Start/End: Complemental strand, 266176 - 266122
Alignment:
Q  449 aggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcc 503  Q
    ||||||||||||  || ||||||||||||| | || |||||||||||||||||||    
T  266176 aggggccaaaattgcagctttgggaaagtttgggggctaaaactgctattaagcc 266122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 449 - 483
Target Start/End: Original strand, 1614171 - 1614205
Alignment:
Q  449 aggggccaaaatcacaactttgggaaagttagagg 483  Q
    ||||||||||||||||||||||||||| |||||||    
T  1614171 aggggccaaaatcacaactttgggaaacttagagg 1614205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 378 - 436
Target Start/End: Complemental strand, 6036770 - 6036712
Alignment:
Q  378 aaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgta 436  Q
    ||||||||  ||||||| ||||||| ||||||||| |||||||||||||  ||||||||    
T  6036770 aaaattggccttgggggccaaaactgccacatatgcaaaacttaggggatagttttgta 6036712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 449 - 522
Target Start/End: Original strand, 1377466 - 1377539
Alignment:
Q  449 aggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcctattttattttagtagaga 522  Q
    ||||||||||||| |||||| | ||||||||| |||| ||||||| |||||| ||| |||| | ||| ||||||    
T  1377466 aggggccaaaatcgcaacttcgtgaaagttaggggacgaaaactgatattaaaccttttttttattaatagaga 1377539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 449 - 522
Target Start/End: Original strand, 1385214 - 1385287
Alignment:
Q  449 aggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcctattttattttagtagaga 522  Q
    ||||||||||||| |||||| | ||||||||| |||| ||||||| |||||| ||| |||| | ||| ||||||    
T  1385214 aggggccaaaatcgcaacttcgtgaaagttaggggacgaaaactgatattaaaccttttttttattaatagaga 1385287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 450 - 503
Target Start/End: Original strand, 4037465 - 4037518
Alignment:
Q  450 ggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcc 503  Q
    |||||||||||||||||||| ||||||  ||||||| |||| ||| ||||||||    
T  4037465 ggggccaaaatcacaacttttggaaagacagaggaccaaaagtgcaattaagcc 4037518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 449 - 505
Target Start/End: Complemental strand, 2164474 - 2164418
Alignment:
Q  449 aggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagccta 505  Q
    ||||||||||||| |||||||  || | ||||||||  |||||||||||||||||||    
T  2164474 aggggccaaaatcgcaactttatgatacttagaggatcaaaactgctattaagccta 2164418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 449 - 505
Target Start/End: Complemental strand, 2176107 - 2176051
Alignment:
Q  449 aggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagccta 505  Q
    ||||||||||||| |||||||  || | ||||||||  |||||||||||||||||||    
T  2176107 aggggccaaaatcgcaactttatgatacttagaggatcaaaactgctattaagccta 2176051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 5e-30; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 353 - 504
Target Start/End: Complemental strand, 14489364 - 14489213
Alignment:
Q  353 gtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagtgnnnnnnnnaaggg 452  Q
    ||||||| ||| |||| ||| ||||||||||||| |||| |||||||||| |||||  || |||||||||||| |||||||||| |         |||||    
T  14489364 gtgccacatcagcgtagaccgagtcaaaattggtcttggaggtcaaaactgccacaggtgcaaaacttagggggcggttttgtaatttttttcttaaggg 14489265  T
Q  453 gccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcct 504  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  14489264 gccaaaatcacaacttttggaaagttagagggctaaaactgctattaagcct 14489213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 333 - 438
Target Start/End: Complemental strand, 34761018 - 34760913
Alignment:
Q  333 catgtgacatctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttt 432  Q
    ||||||||| |||| |||| ||||||||||| | || |||| |||||||||||| ||||||| ||||||| ||||||||| |||||||||||| ||||||    
T  34761018 catgtgacacctcacttagggtgccacgtcagcatagaccacgtcaaaattggtcttgggggccaaaactgccacatatgcaaaacttagggggcggttt 34760919  T
Q  433 tgtagt 438  Q
    ||||||    
T  34760918 tgtagt 34760913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 336 - 504
Target Start/End: Original strand, 44617885 - 44618052
Alignment:
Q  336 gtgacatctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgt 435  Q
    |||||| |||| |||| ||||||||||| |||| ||| ||||||||||||| ||||||| ||||||| ||||| ||| |||||||||||| |||||||||    
T  44617885 gtgacacctcatttagggtgccacgtcagcgtagaccgagtcaaaattggtcttgggggccaaaactgccacaaatgcaaaacttagggggcggttttgt 44617984  T
Q  436 agtgnnnnnnnnaaggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcct 504  Q
    | |         ||||| |||||||| ||||||   ||||||||||||  |||||||||||||||||||    
T  44617985 aat-tttttcttaagggaccaaaatcgcaacttcttgaaagttagagggttaaaactgctattaagcct 44618052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 343 - 506
Target Start/End: Original strand, 5470490 - 5470652
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagtgnnn 442  Q
    |||| |||| ||||||||||| | || ||| ||||||||||||  ||||||| ||||||| ||||| |||||||||||| ||| ||||||||||||        
T  5470490 ctcacttagggtgccacgtcagcatagaccgagtcaaaattggccttgggggccaaaactgccacagatgtaaaacttaaggggcggttttgtagt-ttt 5470588  T
Q  443 nnnnnaaggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcctat 506  Q
         | |||||||||||| ||||||| |||||||||| || ||||||||||||| ||||||||    
T  5470589 tttttagggggccaaaatcgcaactttaggaaagttagggggctaaaactgctataaagcctat 5470652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 343 - 438
Target Start/End: Original strand, 2609242 - 2609337
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    |||| |||| ||||||| ||| |||| ||| ||||||||||| | ||||||||||||||| |||||||||||||||||| ||| || |||||||||    
T  2609242 ctcacttagggtgccacatcagcgtagaccgagtcaaaattgatcttgggggtcaaaactgccacatatgtaaaacttatggggcgattttgtagt 2609337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 353 - 436
Target Start/End: Complemental strand, 25411692 - 25411609
Alignment:
Q  353 gtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgta 436  Q
    ||||||||||| | || ||| |||||||||||||||||||||| |||||| ||||| ||| |||||||||||| ||||||||||    
T  25411692 gtgccacgtcagcatagaccgagtcaaaattggtattgggggtgaaaactgccacagatgcaaaacttagggggcggttttgta 25411609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 348 - 438
Target Start/End: Complemental strand, 4925595 - 4925505
Alignment:
Q  348 ttagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    |||| ||||||||||| |||| ||  |  |||||||||| || |||||||||||| ||||||||| |||||||||||||||||||||||||    
T  4925595 ttagggtgccacgtcagcgtagacagaaccaaaattggtcttaggggtcaaaactgccacatatgcaaaacttaggggacggttttgtagt 4925505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 333 - 436
Target Start/End: Original strand, 41196373 - 41196476
Alignment:
Q  333 catgtgacatctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttt 432  Q
    |||||| || |||| |||| ||||||||||| |||| |||||||| ||||||  ||||||||  |||||| ||||||||| |||||||| ||||| ||||    
T  41196373 catgtggcacctcacttagggtgccacgtcagcgtagaccaagtctaaattgacattgggggcaaaaacttccacatatgcaaaacttaagggacagttt 41196472  T
Q  433 tgta 436  Q
    ||||    
T  41196473 tgta 41196476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 343 - 504
Target Start/End: Complemental strand, 34679258 - 34679096
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttagggga-cggttttgtagtgnn 441  Q
    |||| |||| ||||||||||| |||| |||  ||||||||| || |||| || ||||||| |||||| || ||||||||||||  |||||||||| |       
T  34679258 ctcacttagggtgccacgtcagcgtagaccgggtcaaaatttgtcttggaggccaaaactgccacatgtgcaaaacttaggggggcggttttgtaatttt 34679159  T
Q  442 nnnnnnaaggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcct 504  Q
          | | |||||||||| ||||||||| |||||||| || ||||||||||||||||||||    
T  34679158 tttcttaggtggccaaaatcgcaactttggaaaagttagggggctaaaactgctattaagcct 34679096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 333 - 438
Target Start/End: Complemental strand, 37431714 - 37431609
Alignment:
Q  333 catgtgacatctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttt 432  Q
    |||||| || |||| |||| ||||||||||| |||| ||| ||||||||||||  ||||||| ||||||| ||||| ||| ||||||||| || || |||    
T  37431714 catgtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggccttgggggccaaaactgccacaaatgcaaaacttagtgggcgattt 37431615  T
Q  433 tgtagt 438  Q
    ||||||    
T  37431614 tgtagt 37431609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 374 - 505
Target Start/End: Original strand, 24472631 - 24472760
Alignment:
Q  374 agtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagtgnnnnnnnnaaggggccaaaatcacaactttggga 473  Q
    |||||||||||| ||||| || ||||||| ||||| ||| ||||||||||||  |||||||||||          |||||| |||||||||||||||| |    
T  24472631 agtcaaaattggcattggcggccaaaactgccacagatgcaaaacttagggg--ggttttgtagttttttttcttaggggctaaaatcacaactttggaa 24472728  T
Q  474 aagttagaggactaaaactgctattaagccta 505  Q
    || |||| |  |||||||||||||||||||||    
T  24472729 aaattagggttctaaaactgctattaagccta 24472760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 353 - 436
Target Start/End: Complemental strand, 8857197 - 8857114
Alignment:
Q  353 gtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgta 436  Q
    ||||||| ||| |||  |||||||||||||||| |||||||| ||||||| ||||| ||| |||||||||| | ||||||||||    
T  8857197 gtgccacatcagcgttgaccaagtcaaaattggcattgggggccaaaactgccacaaatgcaaaacttaggaggcggttttgta 8857114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 450 - 504
Target Start/End: Original strand, 21358366 - 21358420
Alignment:
Q  450 ggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcct 504  Q
    ||||||||||||||||||||| ||||||||| || | ||||||||||||||||||    
T  21358366 ggggccaaaatcacaactttgagaaagttagggggcaaaaactgctattaagcct 21358420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 348 - 438
Target Start/End: Complemental strand, 37803278 - 37803189
Alignment:
Q  348 ttagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    |||| ||||||||||| |||| ||| |||||||||||  ||||||| |||||||| ||||| ||| |||||||||| | ||||||||||||    
T  37803278 ttagggtgccacgtcagcgtagaccgagtcaaaattgacattgggg-tcaaaactgccacaaatgcaaaacttaggaggcggttttgtagt 37803189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 343 - 503
Target Start/End: Complemental strand, 39918595 - 39918434
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagtgnnn 442  Q
    |||| |||| ||||||||||| || | ||| ||||||||||||  ||||||| ||||||  ||||||||| ||||||||| || || ||||| |||        
T  39918595 ctcacttagggtgccacgtcagcgaagaccgagtcaaaattggccttgggggccaaaacagccacatatgcaaaacttagcgggcgattttgcagttttt 39918496  T
Q  443 nnnnnaagggg-ccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcc 503  Q
          ||||| |||||||| |||||||| ||||||||| || |||||||| ||||||||||    
T  39918495 tttcttagggggccaaaatcgcaactttgagaaagttagggggctaaaactactattaagcc 39918434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 343 - 503
Target Start/End: Original strand, 4576696 - 4576854
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagtgnnn 442  Q
    |||| |||| |||||||| || |||| ||| |||||||||||| | |||||| |||||||  |||  | | |||||||| |||||  |||||||||        
T  4576696 ctcacttagggtgccacgccagcgtagaccgagtcaaaattggcagtgggggccaaaactgtcacgaacgcaaaacttaagggacaattttgtagt-ttt 4576794  T
Q  443 nnnnnaaggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcc 503  Q
         |||||||||||||| ||||||||| |||||||| || |||||||||||||||||||    
T  4576795 ttattaaggggccaaaatcgcaactttgg-aaagttaggggtctaaaactgctattaagcc 4576854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 333 - 433
Target Start/End: Original strand, 5008431 - 5008531
Alignment:
Q  333 catgtgacatctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttt 432  Q
    |||||| ||||||| |||| ||||||||||| |||| ||| |||||||||||   ||| ||| ||||| | ||||| ||| ||||||||| |||||||||    
T  5008431 catgtggcatctcacttagggtgccacgtcagcgtagaccgagtcaaaattgaccttgagggccaaaattgccacaaatgcaaaacttagaggacggttt 5008530  T
Q  433 t 433  Q
    |    
T  5008531 t 5008531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 450 - 506
Target Start/End: Complemental strand, 6592777 - 6592721
Alignment:
Q  450 ggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcctat 506  Q
    |||| ||||||| ||||||||| |||||||| || ||||||||||||||||||||||    
T  6592777 ggggtcaaaatcgcaactttggaaaagttagggggctaaaactgctattaagcctat 6592721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 448 - 504
Target Start/End: Original strand, 19399434 - 19399490
Alignment:
Q  448 aaggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcct 504  Q
    ||||| |||||||||||||||||  |||||||| || ||||||||||||||||||||    
T  19399434 aagggaccaaaatcacaactttgaaaaagttagggggctaaaactgctattaagcct 19399490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 454 - 509
Target Start/End: Original strand, 14943808 - 14943863
Alignment:
Q  454 ccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcctatttt 509  Q
    |||||||||||||||||| |||||||  || |||||||||||||||||||| ||||    
T  14943808 ccaaaatcacaactttggaaaagttaaggggctaaaactgctattaagcctttttt 14943863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 453 - 503
Target Start/End: Complemental strand, 15022888 - 15022838
Alignment:
Q  453 gccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcc 503  Q
    ||||||||||||||||| | |||||||| || |||||||||||||||||||    
T  15022888 gccaaaatcacaactttcgaaaagttagggggctaaaactgctattaagcc 15022838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 336 - 438
Target Start/End: Original strand, 18969240 - 18969342
Alignment:
Q  336 gtgacatctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgt 435  Q
    |||||| |||| |||||||| ||||||| ||||  || ||||||||||||  ||||||||||||||  ||||| ||  |||| |||| ||||| ||||||    
T  18969240 gtgacacctcatttagagtgtcacgtcagcgtaggcctagtcaaaattggccttgggggtcaaaacagccacaaatacaaaatttagaggacgattttgt 18969339  T
Q  436 agt 438  Q
    |||    
T  18969340 agt 18969342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 343 - 421
Target Start/End: Original strand, 19895767 - 19895845
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaactta 421  Q
    |||| |||| |||| |||||| | |||||| | |||||||||| ||||||||  |||||| ||||||||||||||||||    
T  19895767 ctcacttagggtgctacgtcagcataaaccgaatcaaaattggcattgggggctaaaactgccacatatgtaaaactta 19895845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 348 - 506
Target Start/End: Complemental strand, 25333654 - 25333496
Alignment:
Q  348 ttagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagtgnnnnnnnn 447  Q
    |||| ||||||||||| |||| ||||||||||||||||  |||| |  ||||||| |||||  || ||||||||||||  |||||| ||||             
T  25333654 ttagggtgccacgtcagcgtagaccaagtcaaaattggccttggagaccaaaactgccacaggtgcaaaacttagggggtggttttatagtttttttctt 25333555  T
Q  448 aaggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcctat 506  Q
    ||||| |||||||| ||||||||| |||||||  ||  ||||| || ||||||||||||    
T  25333554 aagggaccaaaatcgcaactttggaaaagttaaggggttaaaattgttattaagcctat 25333496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 450 - 504
Target Start/End: Complemental strand, 43028847 - 43028793
Alignment:
Q  450 ggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcct 504  Q
    |||||||||||| |||||||||  ||||||| || ||||||||||||||||||||    
T  43028847 ggggccaaaatcgcaactttggagaagttagggggctaaaactgctattaagcct 43028793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 357 - 438
Target Start/End: Complemental strand, 32969704 - 32969623
Alignment:
Q  357 cacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    ||||||| |||| ||| ||||||||||||  ||||| | ||||||| ||||| ||| |||||||||||| || |||||||||    
T  32969704 cacgtcagcgtagaccgagtcaaaattggccttgggagccaaaactgccacaaatgaaaaacttagggggcgattttgtagt 32969623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 450 - 503
Target Start/End: Original strand, 34679351 - 34679404
Alignment:
Q  450 ggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcc 503  Q
    ||||||||||||||||||| | ||||||||| || | |||||||||||||||||    
T  34679351 ggggccaaaatcacaacttcgtgaaagttagggggcaaaaactgctattaagcc 34679404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 449 - 505
Target Start/End: Original strand, 14489470 - 14489526
Alignment:
Q  449 aggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagccta 505  Q
    ||||||||||||| |||||| | ||||||||| || | |||||||||||||||||||    
T  14489470 aggggccaaaatcgcaacttcgtgaaagttagggggcgaaaactgctattaagccta 14489526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 450 - 509
Target Start/End: Complemental strand, 5362228 - 5362169
Alignment:
Q  450 ggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcctatttt 509  Q
    |||||||||||| |||||||| ||||||||| || | |||| | ||||||||||||||||    
T  5362228 ggggccaaaatcgcaactttgtgaaagttagggggcgaaaattactattaagcctatttt 5362169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 450 - 509
Target Start/End: Complemental strand, 19206195 - 19206136
Alignment:
Q  450 ggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcctatttt 509  Q
    |||||||||||| |||||||| |||| |||| || | |||| ||||||||||||||||||    
T  19206195 ggggccaaaatcgcaactttgtgaaaattagggggcgaaaattgctattaagcctatttt 19206136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 450 - 505
Target Start/End: Complemental strand, 31827578 - 31827523
Alignment:
Q  450 ggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagccta 505  Q
    |||| ||||||||||||||||| |||||||| |   ||||||||||||||||||||    
T  31827578 gggggcaaaatcacaactttggaaaagttagggagttaaaactgctattaagccta 31827523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 456 - 503
Target Start/End: Complemental strand, 37803165 - 37803118
Alignment:
Q  456 aaaatcacaactttgggaaagttagaggactaaaactgctattaagcc 503  Q
    |||||| |||||||| |||||||||  |||||||||||||||||||||    
T  37803165 aaaatcgcaactttgagaaagttaggagactaaaactgctattaagcc 37803118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 450 - 504
Target Start/End: Complemental strand, 25433 - 25379
Alignment:
Q  450 ggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcct 504  Q
    ||||||||||||  ||||||||||||||||| || | ||||||| ||||||||||    
T  25433 ggggccaaaatcgtaactttgggaaagttagggggcaaaaactgttattaagcct 25379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 388 - 438
Target Start/End: Complemental strand, 25501 - 25451
Alignment:
Q  388 ttgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    ||||||||||||||| |||||  || |||||||||||| ||||||||||||    
T  25501 ttgggggtcaaaactgccacaggtgcaaaacttagggggcggttttgtagt 25451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 455 - 501
Target Start/End: Original strand, 5362445 - 5362491
Alignment:
Q  455 caaaatcacaactttgggaaagttagaggactaaaactgctattaag 501  Q
    ||||||||||||||| | |||||||| ||| ||||||||||||||||    
T  5362445 caaaatcacaactttagaaaagttaggggattaaaactgctattaag 5362491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 348 - 438
Target Start/End: Complemental strand, 35718801 - 35718711
Alignment:
Q  348 ttagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    |||| ||||||| ||| |||| ||  ||||||||||||  |||| || ||||||| ||||| ||| ||||  |||||||||||||||||||    
T  35718801 ttagggtgccacatcaccgtagactgagtcaaaattggccttggaggccaaaactgccacagatgcaaaatgtaggggacggttttgtagt 35718711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 333 - 438
Target Start/End: Original strand, 24306162 - 24306267
Alignment:
Q  333 catgtgacatctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttt 432  Q
    ||||||||| |||| |||| ||| ||| ||| |||| | |||||||||||||   ||||||| || ||||  ||||| || |||||||| ||||||||||    
T  24306162 catgtgacacctcacttagggtgtcacatcagcgtagatcaagtcaaaattgaccttgggggccagaactgtcacatgtgcaaaacttaagggacggttt 24306261  T
Q  433 tgtagt 438  Q
    | ||||    
T  24306262 tatagt 24306267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 450 - 503
Target Start/End: Complemental strand, 36177034 - 36176981
Alignment:
Q  450 ggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcc 503  Q
    ||||| |||||| |||||| | |||| ||||||| |||||||||||||||||||    
T  36177034 ggggctaaaatcgcaacttcgtgaaacttagagggctaaaactgctattaagcc 36176981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 374 - 438
Target Start/End: Original strand, 16043206 - 16043270
Alignment:
Q  374 agtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    ||||||||||||  ||||||| ||||||| ||||| ||| ||||| |||||| ||||| ||||||    
T  16043206 agtcaaaattggccttgggggccaaaactgccacagatgcaaaacatagggggcggttctgtagt 16043270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 1e-27; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 333 - 504
Target Start/End: Complemental strand, 22300771 - 22300600
Alignment:
Q  333 catgtgacatctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttt 432  Q
    |||||| || |||| |||| |||||||||||||||| ||| ||||||||||||| ||||  ||||||||| ||||||||  |||||||| ||||||||||    
T  22300771 catgtggcacctcacttagggtgccacgtcaacgtagaccgagtcaaaattggtcttggaagtcaaaactgccacatatacaaaacttaagggacggttt 22300672  T
Q  433 tgtagtgnnnnnnnnaaggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcct 504  Q
    ||||||         | || ||||||||| ||||||| | ||||||||||| |||||||| |||||||||||    
T  22300671 tgtagttttttttttagggtgccaaaatcgcaactttagaaaagttagagggctaaaactactattaagcct 22300600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 343 - 505
Target Start/End: Original strand, 27904636 - 27904799
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtag-tgnn 441  Q
    |||| |||| ||||||||||| |||| ||| ||||||||||||| ||||||| ||||||| |||||  || |||||||||||| ||||||||||| |       
T  27904636 ctcacttagggtgccacgtcagcgtagaccgagtcaaaattggtcttgggggacaaaactgccacaagtgcaaaacttagggggcggttttgtagttttt 27904735  T
Q  442 nnnnnnaaggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagccta 505  Q
          | |||||||||||| ||||||||  ||||||||||| |||||||||||||||||||||    
T  27904736 tttcttacggggccaaaatcgcaactttgaaaaagttagagggctaaaactgctattaagccta 27904799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 333 - 435
Target Start/End: Complemental strand, 2974804 - 2974702
Alignment:
Q  333 catgtgacatctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttt 432  Q
    |||||| || |||| |||| ||||||||||| |||| ||| |||||||||||| |||||||| ||||||| ||||| ||| |||||||||||| ||||||    
T  2974804 catgtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggcattgggggccaaaactgccacagatgcaaaacttagggggcggttt 2974705  T
Q  433 tgt 435  Q
    |||    
T  2974704 tgt 2974702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 353 - 433
Target Start/End: Original strand, 3999261 - 3999341
Alignment:
Q  353 gtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggtttt 433  Q
    ||||||||||| |||| ||||||||||||||||  ||||||| ||||||| ||||||||||||||||||||  ||||||||    
T  3999261 gtgccacgtcagcgtagaccaagtcaaaattggccttgggggccaaaactgccacatatgtaaaacttaggatacggtttt 3999341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 343 - 501
Target Start/End: Original strand, 20629897 - 20630057
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtag-tgnn 441  Q
    |||| |||| ||||||||||| |||| | | |||||||||||||  ||| || ||||||| ||||| ||| |||||||||||| ||||||||||| |       
T  20629897 ctcacttagggtgccacgtcagcgtagatcgagtcaaaattggtcctggaggccaaaacttccacaaatgcaaaacttagggggcggttttgtagttttt 20629996  T
Q  442 nnnnnnaaggggccaaaatcacaactttgggaaagttagag-gactaaaactgctattaag 501  Q
          |||||||||||||||||||||||| |||||||| | | |||||||||||||||||    
T  20629997 tttcttaaggggccaaaatcacaactttggaaaagttagggaggctaaaactgctattaag 20630057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 353 - 500
Target Start/End: Original strand, 19131663 - 19131809
Alignment:
Q  353 gtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagtgnnnnnnnnaaggg 452  Q
    ||||||||||| |||| ||| ||||||||||||  || |||| |||||||  |||| ||| |||||||||||| ||||||||||||         | |||    
T  19131663 gtgccacgtcagcgtagaccgagtcaaaattggccttcggggccaaaactgtcacagatgcaaaacttagggggcggttttgtagt-ttttttttagggg 19131761  T
Q  453 gccaaaatcacaactttgggaaagttagaggactaaaactgctattaa 500  Q
    || |||||| ||||||| | ||||||||||||||||||||||||||||    
T  19131762 gcaaaaatcgcaactttagaaaagttagaggactaaaactgctattaa 19131809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 343 - 504
Target Start/End: Original strand, 12406193 - 12406355
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtag-tgnn 441  Q
    |||| |||| ||||||||||| |||| ||  ||||||||||||  ||||||| ||||||| ||||| |||||||||||||||| ||||||||| | |       
T  12406193 ctcacttagggtgccacgtcagcgtagactgagtcaaaattggccttgggggccaaaactgccacagatgtaaaacttagggggcggttttgttgttttt 12406292  T
Q  442 nnnnnnaaggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcct 504  Q
           ||||||||||||| ||||||||  |||||||| || |||||| |||||||||||||    
T  12406293 ttttcttaggggccaaaatctcaactttgaaaaagttagggggctaaaattgctattaagcct 12406355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 343 - 503
Target Start/End: Original strand, 3333854 - 3334015
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtag-tgnn 441  Q
    |||| |||| ||||||||||| |||| ||| |||||||||||   ||||||| ||||||| ||||||||| |||||||| ||  ||||||||||| |       
T  3333854 ctcacttagggtgccacgtcagcgtagaccgagtcaaaattgaccttgggggccaaaactgccacatatgcaaaacttatggagcggttttgtagttttt 3333953  T
Q  442 nnnnnnaaggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcc 503  Q
          | |||||||||||| ||||||||| |||||||| || |||||||| ||||||||||    
T  3333954 cttcttagggggccaaaatcgcaactttggaaaagttagggggctaaaactactattaagcc 3334015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 333 - 438
Target Start/End: Original strand, 40276172 - 40276277
Alignment:
Q  333 catgtgacatctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttt 432  Q
    |||||| || |||| |||| ||| ||||||| |||| |||  ||||||||| |  ||||||||||||| | ||||||||| |||||||||||||||||||    
T  40276172 catgtggcacctcacttagggtgtcacgtcagcgtagaccgggtcaaaattagccttgggggtcaaaattgccacatatgcaaaacttaggggacggttt 40276271  T
Q  433 tgtagt 438  Q
    ||||||    
T  40276272 tgtagt 40276277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 336 - 424
Target Start/End: Complemental strand, 18403154 - 18403066
Alignment:
Q  336 gtgacatctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggg 424  Q
    |||||| |||| |||| |||||||||||||||| ||  ||||||||||||| ||||||||||||||| ||| | ||| |||||||||||    
T  18403154 gtgacacctcacttagggtgccacgtcaacgtagactgagtcaaaattggtcttgggggtcaaaactgccagagatgcaaaacttaggg 18403066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 450 - 505
Target Start/End: Complemental strand, 12406094 - 12406039
Alignment:
Q  450 ggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagccta 505  Q
    |||||||||||| |||||||||||||||||| || |||||||||||||||||||||    
T  12406094 ggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagccta 12406039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 454 - 505
Target Start/End: Complemental strand, 26563039 - 26562988
Alignment:
Q  454 ccaaaatcacaactttgggaaagttagaggactaaaactgctattaagccta 505  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  26563039 ccaaaatcacaactttggaaaagttagcggactaaaactgctattaagccta 26562988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 333 - 504
Target Start/End: Complemental strand, 36798341 - 36798169
Alignment:
Q  333 catgtgacatctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttt 432  Q
    |||||| || |||| ||||||||||||||||  ||| ||| ||||||| ||||| ||||||| ||||||| ||||| ||| ||||||||||||  |||||    
T  36798341 catgtggcacctcacttagagtgccacgtcagtgtagaccgagtcaaa-ttggtcttgggggccaaaactgccacagatgcaaaacttagggggtggttt 36798243  T
Q  433 tgtag--tgnnnnnnnnaaggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcct 504  Q
    |||||  |         | |||||||||||  ||||||||| |||||||  || ||||||||||||||||||||    
T  36798242 tgtagtttttttttcttagggggccaaaattgcaactttggaaaagttaagggtctaaaactgctattaagcct 36798169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 343 - 436
Target Start/End: Complemental strand, 20512357 - 20512264
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgta 436  Q
    |||| |||| |||||| || | |||| ||| ||||||||||||| |||||||||||||||||||||  || |||||||||||| | ||||||||    
T  20512357 ctcacttagggtgccatgttagcgtagaccgagtcaaaattggtcttgggggtcaaaactaccacaggtgcaaaacttagggggcagttttgta 20512264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 343 - 500
Target Start/End: Complemental strand, 31080637 - 31080480
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagtgnnn 442  Q
    |||| |||| ||||||||||| | || ||| ||| ||||||||  ||||||| ||||||| ||||| ||| ||||||||||||  |||||||||||        
T  31080637 ctcacttagggtgccacgtcagcatagaccgagttaaaattggccttgggggccaaaactgccacagatgcaaaacttagggggtggttttgtagttttt 31080538  T
Q  443 nnnnnaaggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaa 500  Q
         | | || ||||||| ||||||||| ||||||||||| ||||||||| ||||||    
T  31080537 tttttaggaggtcaaaatcgcaactttggaaaagttagagggctaaaactgatattaa 31080480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 333 - 438
Target Start/End: Original strand, 32391862 - 32391967
Alignment:
Q  333 catgtgacatctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttt 432  Q
    |||||| || |||| |||| ||||||||||| |||| ||| ||||||||||||| ||||  |||||||||  |||| ||| |||||||| ||| ||||||    
T  32391862 catgtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggtcttggatgtcaaaactgtcacacatgcaaaacttaaggggcggttt 32391961  T
Q  433 tgtagt 438  Q
    ||||||    
T  32391962 tgtagt 32391967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 353 - 501
Target Start/End: Original strand, 37897881 - 37898029
Alignment:
Q  353 gtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtag-tgnnnnnnnnaagg 451  Q
    |||| |||||| | || ||| ||||||||||||| |||| || ||||||| ||||||||| |||||||||||| ||||||||||| |         | ||    
T  37897881 gtgctacgtcagcatagaccgagtcaaaattggtcttggaggccaaaactgccacatatgcaaaacttagggg-cggttttgtagttttttttcttaggg 37897979  T
Q  452 ggccaaaatcacaactttgggaaagttagaggactaaaactgctattaag 501  Q
    |||||||||| ||||||||  |||||||| || |||||||||||||||||    
T  37897980 ggccaaaatcgcaactttgaaaaagttagggggctaaaactgctattaag 37898029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 343 - 438
Target Start/End: Complemental strand, 9852947 - 9852852
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    |||| |||| ||||||||||| |||| | ||||||||||||||  ||||| | ||||||| ||||| ||| |||||||||||| || |||||||||    
T  9852947 ctcacttagggtgccacgtcagcgtagatcaagtcaaaattggccttgggagccaaaactgccacagatgcaaaacttagggggcgattttgtagt 9852852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 353 - 425
Target Start/End: Original strand, 34320110 - 34320182
Alignment:
Q  353 gtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttagggg 425  Q
    |||||||||||  ||| |||||||||||||||   ||||||| ||||||| ||||| ||||||||||||||||    
T  34320110 gtgccacgtcagtgtagaccaagtcaaaattgactttgggggccaaaactgccacaaatgtaaaacttagggg 34320182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 455 - 503
Target Start/End: Complemental strand, 40132952 - 40132904
Alignment:
Q  455 caaaatcacaactttgggaaagttagaggactaaaactgctattaagcc 503  Q
    ||||||| ||||||||  |||||||||||||||||||||||||||||||    
T  40132952 caaaatcgcaactttgaaaaagttagaggactaaaactgctattaagcc 40132904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 343 - 438
Target Start/End: Original strand, 19340917 - 19341012
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    |||| |||| |||||||||||||||  ||| ||||||||||||  ||||||   |||||| ||||| ||| ||||||||||  |||||||||||||    
T  19340917 ctcatttagggtgccacgtcaacgttgaccgagtcaaaattggctttggggactaaaactgccacagatgcaaaacttaggaaacggttttgtagt 19341012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 449 - 500
Target Start/End: Original strand, 40133139 - 40133190
Alignment:
Q  449 aggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaa 500  Q
    ||||||||||||| |||||||||||||||||| || |||||| |||||||||    
T  40133139 aggggccaaaatcgcaactttgggaaagttagggggctaaaattgctattaa 40133190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 454 - 504
Target Start/End: Original strand, 36798441 - 36798491
Alignment:
Q  454 ccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcct 504  Q
    |||||||| |||||||| ||||||||| || ||||||||||||||||||||    
T  36798441 ccaaaatcgcaactttgagaaagttagggggctaaaactgctattaagcct 36798491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 333 - 438
Target Start/End: Complemental strand, 25910894 - 25910789
Alignment:
Q  333 catgtgacatctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttt 432  Q
    ||||||||| |||| |||| ||||||||||| |||| ||| |||||||||||   ||||||| ||||||| |||||  || |||| |||| ||  |||||    
T  25910894 catgtgacacctcacttagggtgccacgtcagcgtagaccgagtcaaaattgaccttgggggccaaaactgccacaggtgcaaaatttagagggtggttt 25910795  T
Q  433 tgtagt 438  Q
    ||||||    
T  25910794 tgtagt 25910789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 455 - 507
Target Start/End: Complemental strand, 24405538 - 24405486
Alignment:
Q  455 caaaatcacaactttgggaaagttagaggactaaaactgctattaagcctatt 507  Q
    ||||||| ||||||||  |||||||| ||||||||||||||||||| ||||||    
T  24405538 caaaatcgcaactttgaaaaagttaggggactaaaactgctattaaacctatt 24405486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 448 - 508
Target Start/End: Complemental strand, 32391774 - 32391714
Alignment:
Q  448 aaggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcctattt 508  Q
    ||||||||||||||||||||| | ||||||||  || | |||||||||||||||| |||||    
T  32391774 aaggggccaaaatcacaacttcgtgaaagttaaggggcgaaaactgctattaagcttattt 32391714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 450 - 505
Target Start/End: Original strand, 2974895 - 2974950
Alignment:
Q  450 ggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagccta 505  Q
    |||||||||||| |||||| | ||||||||| || | |||||||||||||||||||    
T  2974895 ggggccaaaatcgcaacttcgtgaaagttagggggcaaaaactgctattaagccta 2974950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 453 - 508
Target Start/End: Complemental strand, 39574289 - 39574234
Alignment:
Q  453 gccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcctattt 508  Q
    ||||||||| |||||| | |||||||||||| | |||||||||||||||| |||||    
T  39574289 gccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaagcttattt 39574234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 343 - 502
Target Start/End: Original strand, 43098180 - 43098337
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagtgnnn 442  Q
    |||| |||| ||||||||||| |||| ||  ||||||||||| ||| ||||| ||||||| | |||  || |||||||||| | ||||||||||||        
T  43098180 ctcacttagggtgccacgtcagcgtagactgagtcaaaattgatatcgggggccaaaactgctacaggtgcaaaacttaggcg-cggttttgtagt-ttt 43098277  T
Q  443 nnnnnaaggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagc 502  Q
         | ||||| ||||||  |||||||  |||||||| |||||||||||||||||||||    
T  43098278 tttttagggggcaaaaatcgtaactttgaaaaagttaggggactaaaactgctattaagc 43098337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 449 - 503
Target Start/End: Original strand, 6131795 - 6131849
Alignment:
Q  449 aggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcc 503  Q
    ||||||||||||| ||||||| ||||||||||    |||||||||||||||||||    
T  6131795 aggggccaaaatcgcaactttaggaaagttaggtagctaaaactgctattaagcc 6131849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 338 - 436
Target Start/End: Complemental strand, 25363991 - 25363893
Alignment:
Q  338 gacatctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgta 436  Q
    |||| |||| |||| ||| ||||||| |||| ||| | |||||||||   || |||| |||||||||||||  || |||||||||||||| ||||||||    
T  25363991 gacacctcatttagggtgtcacgtcagcgtagaccgaatcaaaattgacttttggggccaaaactaccacaattgcaaaacttaggggacagttttgta 25363893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 343 - 436
Target Start/End: Complemental strand, 26702596 - 26702504
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgta 436  Q
    |||| |||| |||||||||||   || ||| | ||||||||||| ||||||| ||||||| ||||| ||| ||||||| |||| ||||||||||    
T  26702596 ctcacttagggtgccacgtcaggatagaccgaatcaaaattggtcttgggggccaaaactgccacaaatgcaaaactt-gggggcggttttgta 26702504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 343 - 436
Target Start/End: Complemental strand, 26972329 - 26972237
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgta 436  Q
    |||| |||| |||||||||||   || ||| | ||||||||||| ||||||| ||||||| ||||| ||| ||||||| |||| ||||||||||    
T  26972329 ctcacttagggtgccacgtcaggatagaccgaatcaaaattggtcttgggggccaaaactgccacaaatgcaaaactt-gggggcggttttgta 26972237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 378 - 438
Target Start/End: Original strand, 28446192 - 28446252
Alignment:
Q  378 aaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    ||||||| | ||||||| ||||||| | |||  || |||||||||||||||||||||||||    
T  28446192 aaaattgatcttgggggccaaaactgctacagttgcaaaacttaggggacggttttgtagt 28446252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 456 - 504
Target Start/End: Original strand, 40276297 - 40276345
Alignment:
Q  456 aaaatcacaactttgggaaagttagaggactaaaactgctattaagcct 504  Q
    |||||| ||| |||||||||||||| ||  |||||||||||||||||||    
T  40276297 aaaatcgcaaatttgggaaagttagggggataaaactgctattaagcct 40276345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 3e-25; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 343 - 505
Target Start/End: Original strand, 51315637 - 51315800
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtag-tgnn 441  Q
    |||| |||| ||||||||||| |||| ||| ||||||||||||  ||||||| ||||||| |||||  || |||||||||||| ||||||||||| |       
T  51315637 ctcacttagggtgccacgtcagcgtagaccgagtcaaaattggccttgggggccaaaactgccacaggtgcaaaacttagggggcggttttgtagttttt 51315736  T
Q  442 nnnnnnaaggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagccta 505  Q
          | |||||||||||| |||||||||||||||||| || |||||||||||||||||||||    
T  51315737 tttcttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagccta 51315800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 333 - 438
Target Start/End: Original strand, 27178290 - 27178395
Alignment:
Q  333 catgtgacatctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttt 432  Q
    ||||||||| ||||  ||| ||| ||| ||| |||| |||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||  |||||    
T  27178290 catgtgacacctcacgtagggtgacacatcagcgtagaccaagtcaaaattggcattgggggtcaaaactaccacagatgcaaaacttagggggtggttt 27178389  T
Q  433 tgtagt 438  Q
    ||||||    
T  27178390 tgtagt 27178395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 343 - 438
Target Start/End: Original strand, 33329770 - 33329865
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    |||| |||| ||||||||||| |||| ||| ||||||||||||| ||||||| ||||||| ||||| ||| || ||||||||||||||||||||||    
T  33329770 ctcacttagggtgccacgtcagcgtagaccgagtcaaaattggtcttgggggccaaaactgccacaaatgcaatacttaggggacggttttgtagt 33329865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 343 - 500
Target Start/End: Original strand, 44585939 - 44586097
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtag-tgnn 441  Q
    |||| |||| ||||||||||| |||| ||| ||||||||||||   |||||| ||||||| ||||| | | |||||||||||| ||||||||||| |       
T  44585939 ctcacttagggtgccacgtcagcgtagaccgagtcaaaattggccgtgggggccaaaactgccacagaagcaaaacttagggggcggttttgtagttttt 44586038  T
Q  442 nnnnnnaaggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaa 500  Q
          | |||||||||||| |||||||||||||||||| || ||||||||||||||||    
T  44586039 tttcttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaa 44586097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 348 - 507
Target Start/End: Original strand, 578571 - 578729
Alignment:
Q  348 ttagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagtgnnnnnnnn 447  Q
    |||| ||||||||||| | || ||| ||||||||||||  ||||||| |||||||||||||  || |||||||||||| ||||||||||||             
T  578571 ttagggtgccacgtcagcatagaccgagtcaaaattggccttgggggccaaaactaccacaggtgaaaaacttagggg-cggttttgtagttttttttct 578669  T
Q  448 aaggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcctatt 507  Q
     ||||||||||||| ||||||||| ||||||||  | ||||||||| |||||| ||||||    
T  578670 taggggccaaaatcgcaactttggaaaagttaggaggctaaaactgatattaaacctatt 578729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 343 - 438
Target Start/End: Original strand, 44436551 - 44436646
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    |||| |||| ||||||||||| |||| ||| ||||||||||||  ||||||| ||||||| ||||| ||| |||||||||||| ||||||||||||    
T  44436551 ctcacttagggtgccacgtcagcgtagaccgagtcaaaattggccttgggggccaaaactgccacagatgcaaaacttagggggcggttttgtagt 44436646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 353 - 502
Target Start/End: Complemental strand, 54464313 - 54464163
Alignment:
Q  353 gtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtag-tgnnnnnnnnaagg 451  Q
    ||||||||| | |||| ||| |||||||||||   ||||||||||||||| ||||||||| |||||||||||||| ||||||||| |         ||||    
T  54464313 gtgccacgtgagcgtagaccgagtcaaaattgaccttgggggtcaaaactgccacatatgcaaaacttaggggacagttttgtagttctttttcttaagg 54464214  T
Q  452 ggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagc 502  Q
    |  |||||||  |||||| | |||||||| |||||||||||||||||||||    
T  54464213 gatcaaaatcgtaactttagaaaagttaggggactaaaactgctattaagc 54464163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 357 - 436
Target Start/End: Original strand, 8024949 - 8025028
Alignment:
Q  357 cacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgta 436  Q
    ||||||| |||| ||| ||| ||||||||| |||| || ||||||||||||||||| ||||||||||||||| |||||||    
T  8024949 cacgtcagcgtagaccgagttaaaattggtcttggaggccaaaactaccacatatgcaaaacttaggggacgattttgta 8025028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 343 - 438
Target Start/End: Original strand, 54719150 - 54719245
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    |||| |||| ||||||||||| |||| ||| |||||||||||| |||||||| |||| ||   ||||||| |||||||||||| ||||||||||||    
T  54719150 ctcacttagggtgccacgtcagcgtagaccgagtcaaaattggcattgggggccaaacctggtacatatgcaaaacttagggggcggttttgtagt 54719245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 353 - 438
Target Start/End: Original strand, 44433227 - 44433312
Alignment:
Q  353 gtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    ||||||| ||| |||| |||  |||||||||||  ||||||| ||||||| ||||||||| |||||||||||| ||||||||||||    
T  44433227 gtgccacatcagcgtagaccgggtcaaaattggccttgggggccaaaactgccacatatgcaaaacttagggggcggttttgtagt 44433312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 343 - 438
Target Start/End: Original strand, 48348412 - 48348506
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    |||| |||| ||||||||||| |||| ||| ||||||||||||  |||||| |||||||| ||||||||| |||||||| ||| || |||||||||    
T  48348412 ctcacttagcgtgccacgtcagcgtagaccgagtcaaaattgggcttgggg-tcaaaactgccacatatgcaaaacttaaggggcgattttgtagt 48348506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 343 - 503
Target Start/End: Original strand, 20432337 - 20432497
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgt-aaaacttaggggacggttttgtagtgnn 441  Q
    |||| |||| |||| |||||| |||| |||||||||||||||   ||||||||||||||| ||||| |||| ||||||||||||  | |||||||||       
T  20432337 ctcacttagggtgctacgtcagcgtagaccaagtcaaaattgtccttgggggtcaaaactgccacagatgtaaaaacttagggggtgattttgtagt-tt 20432435  T
Q  442 nnnnnnaaggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcc 503  Q
          | ||| |||||||||||||||| | |||||||| ||  ||||| ||||||||||||    
T  20432436 tttcttaggggaccaaaatcacaacttttgaaaagttagggggttaaaaatgctattaagcc 20432497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 455 - 508
Target Start/End: Original strand, 25154447 - 25154500
Alignment:
Q  455 caaaatcacaactttgggaaagttagaggactaaaactgctattaagcctattt 508  Q
    ||||||||||||||||| |||||||| ||  |||||||||||||||||||||||    
T  25154447 caaaatcacaactttggtaaagttagggggttaaaactgctattaagcctattt 25154500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 374 - 438
Target Start/End: Complemental strand, 38957976 - 38957912
Alignment:
Q  374 agtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    ||||||||||||  ||||||| ||||||| ||||| ||| |||||||||||| ||||||||||||    
T  38957976 agtcaaaattggccttgggggccaaaactgccacaaatgcaaaacttagggggcggttttgtagt 38957912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 354 - 438
Target Start/End: Original strand, 43747444 - 43747528
Alignment:
Q  354 tgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    |||||||||| |||| ||| ||||||||||| |  |||||| ||||||| ||| | ||| |||||||||||| ||||||||||||    
T  43747444 tgccacgtcagcgtagaccgagtcaaaattgatcgtgggggccaaaactgccataaatgcaaaacttagggggcggttttgtagt 43747528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 343 - 502
Target Start/End: Original strand, 1814710 - 1814866
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtatt-gggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagtgnn 441  Q
    |||| |||| ||||||||||| |||| ||| ||||||||||| | || ||||| ||||||| |||    || |||||||||||||||||||||||||       
T  1814710 ctcacttagggtgccacgtcagcgtagaccgagtcaaaattgatcttagggggccaaaactgcca----tgcaaaacttaggggacggttttgtagtttt 1814805  T
Q  442 nnnnnnaaggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagc 502  Q
          | ||| ||||||||  |||||||| ||||||||  | ||||||||||||||||||    
T  1814806 tttcttaggggtccaaaatcgaaactttggaaaagttaggaggctaaaactgctattaagc 1814866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 336 - 507
Target Start/End: Complemental strand, 1938484 - 1938313
Alignment:
Q  336 gtgacatctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgt 435  Q
    |||||| |||| |||| |||||| |||| |||| ||| |||||||||||   ||| ||| |||||||||||||  || |||||||| ||| |||||||||    
T  1938484 gtgacacctcacttagggtgccatgtcagcgtagaccgagtcaaaattgactttgtgggccaaaactaccacaggtgcaaaacttaaggggcggttttgt 1938385  T
Q  436 agtgnnnnnnnnaaggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcctatt 507  Q
    ||           |||||||||| || ||| ||| | |||||||  ||||||||||||||||||| ||||||    
T  1938384 aggttttcttcctaggggccaaagtcgcaattttagaaaagttaagggactaaaactgctattaaacctatt 1938313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 389 - 511
Target Start/End: Complemental strand, 50802773 - 50802651
Alignment:
Q  389 tgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagtgnnnnnnnnaaggggccaaaatcacaactttgggaaagtt-agaggacta 487  Q
    |||||||||||||| |||||| || ||||||||||||   ||||||||||         | |||||||||||||||||||||| |||||| |||||  ||    
T  50802773 tgggggtcaaaactgccacatgtgcaaaacttagggggtagttttgtagtttttttcttagggggccaaaatcacaactttggaaaagttaagagg-tta 50802675  T
Q  488 aaactgctattaagcctattttat 511  Q
    ||||||||||||||| ||| ||||    
T  50802674 aaactgctattaagcttatattat 50802651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 389 - 511
Target Start/End: Original strand, 50873104 - 50873226
Alignment:
Q  389 tgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagtgnnnnnnnnaaggggccaaaatcacaactttgggaaagtt-agaggacta 487  Q
    |||||||||||||| |||||| || ||||||||||||   ||||||||||         | |||||||||||||||||||||| |||||| |||||  ||    
T  50873104 tgggggtcaaaactgccacatgtgcaaaacttagggggtagttttgtagtttttttcttagggggccaaaatcacaactttggaaaagttaagagg-tta 50873202  T
Q  488 aaactgctattaagcctattttat 511  Q
    ||||||||||||||| ||| ||||    
T  50873203 aaactgctattaagcttatattat 50873226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 372 - 438
Target Start/End: Original strand, 7218333 - 7218399
Alignment:
Q  372 caagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    |||||||||||||   ||||||| ||||||| ||||| |||||||||||||| ||||| ||||||||    
T  7218333 caagtcaaaattgaccttgggggccaaaactgccacagatgtaaaacttaggagacggctttgtagt 7218399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 336 - 438
Target Start/End: Original strand, 28204632 - 28204734
Alignment:
Q  336 gtgacatctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgt 435  Q
    |||||| |||||||||  ||||||||||  ||| ||| |||||||||||| ||||| || ||||||||||||| ||  |||||||| ||| |  ||||||    
T  28204632 gtgacacctcaattaggatgccacgtcagtgtagaccgagtcaaaattggcattggaggccaaaactaccacaaatacaaaacttaaggggcaattttgt 28204731  T
Q  436 agt 438  Q
    |||    
T  28204732 agt 28204734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 348 - 438
Target Start/End: Original strand, 43586719 - 43586809
Alignment:
Q  348 ttagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    |||| ||||||||||| |||| |||||||||||||||||||  |||| || ||||  |||| ||| ||||| |||| |||| |||||||||    
T  43586719 ttagggtgccacgtcagcgtagaccaagtcaaaattggtatcaggggccataactgtcacaaatgcaaaacataggagacgattttgtagt 43586809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 451 - 509
Target Start/End: Original strand, 44127609 - 44127667
Alignment:
Q  451 gggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcctatttt 509  Q
    ||||||||||| |||||||| |||| ||||||   ||||||||||||||||||||||||    
T  44127609 gggccaaaatcgcaactttgagaaaattagagagttaaaactgctattaagcctatttt 44127667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 333 - 421
Target Start/End: Complemental strand, 38177347 - 38177259
Alignment:
Q  333 catgtgacatctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaactta 421  Q
    |||||| || |||| |||| ||||||||||| || ||||| ||||||||||||  ||||||| ||||| |  |||||||| ||||||||    
T  38177347 catgtggcacctcacttagggtgccacgtcagcgcaaaccgagtcaaaattggccttgggggccaaaaatgtcacatatgcaaaactta 38177259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 452 - 508
Target Start/End: Original strand, 44433329 - 44433385
Alignment:
Q  452 ggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcctattt 508  Q
    |||| ||||| ||||| ||| |||||||| || ||||||||||||||||||||||||    
T  44433329 ggccgaaatcgcaactgtggaaaagttagggggctaaaactgctattaagcctattt 44433385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 343 - 438
Target Start/End: Original strand, 19404547 - 19404642
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    |||| |||| ||| ||||| | |||| || |||||||||||||  ||||||| |||||||  ||||| || |||||||| |||||| |||||||||    
T  19404547 ctcacttagggtgtcacgttagcgtagactaagtcaaaattggccttgggggccaaaactgtcacatgtgcaaaacttaagggacgattttgtagt 19404642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 455 - 506
Target Start/End: Complemental strand, 25902450 - 25902399
Alignment:
Q  455 caaaatcacaactttgggaaagttagaggactaaaactgctattaagcctat 506  Q
    |||||||| |||||||| ||||||||||| ||||||||  ||||||||||||    
T  25902450 caaaatcataactttggaaaagttagagggctaaaactagtattaagcctat 25902399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 455 - 514
Target Start/End: Complemental strand, 54719042 - 54718983
Alignment:
Q  455 caaaatcacaactttgggaaagttagaggactaaaactgctattaagcctattttatttt 514  Q
    ||||||| |||||| | ||||||||| |||| |||||||||||||||||| |||| ||||    
T  54719042 caaaatcgcaacttcgtgaaagttagtggacgaaaactgctattaagccttttttttttt 54718983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 336 - 438
Target Start/End: Original strand, 47189740 - 47189842
Alignment:
Q  336 gtgacatctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgt 435  Q
    |||||| |||| |||  ||| |||||||  ||| || |||||||||||| | ||| ||||||||||| ||||| ||| |||||||| ||  |||||||||    
T  47189740 gtgacacctcacttaaggtgtcacgtcagtgtagacgaagtcaaaattgatcttgagggtcaaaactgccacaaatgcaaaacttatggagcggttttgt 47189839  T
Q  436 agt 438  Q
    |||    
T  47189840 agt 47189842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 463 - 505
Target Start/End: Complemental strand, 49787290 - 49787248
Alignment:
Q  463 caactttgggaaagttagaggactaaaactgctattaagccta 505  Q
    ||||||||| ||||||||||| |||||| ||||||||||||||    
T  49787290 caactttggaaaagttagagggctaaaattgctattaagccta 49787248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 365 - 438
Target Start/End: Original strand, 14340909 - 14340982
Alignment:
Q  365 cgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    |||| ||| |||||||||| |  ||||||| ||||||| ||||| ||| ||||||||||||||  |||||||||    
T  14340909 cgtagaccgagtcaaaattagcgttgggggccaaaactgccacaaatgcaaaacttaggggactattttgtagt 14340982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 452 - 505
Target Start/End: Original strand, 14992882 - 14992935
Alignment:
Q  452 ggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagccta 505  Q
    |||||||||||||||||| ||||||||||  | ||||||||| |||||| ||||    
T  14992882 ggccaaaatcacaactttaggaaagttaggcggctaaaactgttattaaaccta 14992935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 455 - 500
Target Start/End: Original strand, 27178413 - 27178458
Alignment:
Q  455 caaaatcacaactttgggaaagttagaggactaaaactgctattaa 500  Q
    ||||||||||||||||  |||||| |||| ||||||||||||||||    
T  27178413 caaaatcacaactttgaaaaagttggagggctaaaactgctattaa 27178458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 452 - 505
Target Start/End: Original strand, 28944228 - 28944281
Alignment:
Q  452 ggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagccta 505  Q
    |||||||||| |||||| |  |||||||| |||| |||||||||||||||||||    
T  28944228 ggccaaaatcgcaacttagtaaaagttaggggacaaaaactgctattaagccta 28944281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 343 - 424
Target Start/End: Original strand, 36687744 - 36687825
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggg 424  Q
    |||| |||| ||||||||||| |||||||| |||||||||||  ||||| || ||||| | ||||| ||| ||| |||||||    
T  36687744 ctcacttagggtgccacgtcagcgtaaaccgagtcaaaattgacattggaggccaaaattgccacaaatgcaaatcttaggg 36687825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 450 - 503
Target Start/End: Complemental strand, 38177231 - 38177178
Alignment:
Q  450 ggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcc 503  Q
    |||||||||||| |||||||||||||||||  || |||||| ||| ||||||||    
T  38177231 ggggccaaaatcgcaactttgggaaagttaaggggctaaaattgccattaagcc 38177178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 450 - 506
Target Start/End: Original strand, 86825 - 86881
Alignment:
Q  450 ggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcctat 506  Q
    |||||||||||| ||||||   ||||||||| |||| |||||| |||||||||||||    
T  86825 ggggccaaaatcgcaacttcatgaaagttaggggacgaaaactcctattaagcctat 86881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 353 - 425
Target Start/End: Complemental strand, 35359147 - 35359075
Alignment:
Q  353 gtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttagggg 425  Q
    ||||||||||| |||| ||| |||||||||||  ||| |||| ||||||| |||||| || |||| |||||||    
T  35359147 gtgccacgtcagcgtagaccgagtcaaaattgacattaggggccaaaactgccacatgtgcaaaaattagggg 35359075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 449 - 505
Target Start/End: Original strand, 35359244 - 35359300
Alignment:
Q  449 aggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagccta 505  Q
    |||||||||||| ||||||| | ||||||||||||   |||||| ||||||||||||    
T  35359244 aggggccaaaattacaacttcgtgaaagttagagggtgaaaactactattaagccta 35359300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 343 - 438
Target Start/End: Complemental strand, 44624784 - 44624689
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttagggga-cggttttgtagt 438  Q
    |||| |||| ||||||||||| |||| ||| ||||||||||||  || |||  ||||||| ||||| ||| ||||| ||||||| ||||||||||||    
T  44624784 ctcacttagggtgccacgtcagcgtagaccgagtcaaaattggcctt-gggaccaaaactgccacagatgcaaaacataggggatcggttttgtagt 44624689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 5e-24; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 337 - 510
Target Start/End: Complemental strand, 41243809 - 41243637
Alignment:
Q  337 tgacatctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgta 436  Q
    ||||| |||| |||| |||||||||||||||| ||| ||||||||||||  ||||||   |||||| ||||| ||| |||||||||||| ||||||||||    
T  41243809 tgacacctcacttagggtgccacgtcaacgtagaccgagtcaaaattggccttggggacaaaaactgccacaaatgcaaaacttagggg-cggttttgta 41243711  T
Q  437 gtgnnnnnnnnaaggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcctatttta 510  Q
    ||         | ||||| |||||  ||||||||| |||||||| || ||||||||||||||||||||||||||    
T  41243710 gtttttttcttagggggctaaaattgcaactttggaaaagttagggggctaaaactgctattaagcctatttta 41243637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 336 - 437
Target Start/End: Original strand, 36580421 - 36580522
Alignment:
Q  336 gtgacatctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgt 435  Q
    |||||| |||| |||| ||||||||||| |||| ||| |||||||||||   ||||||| ||||||| ||||| ||| |||||||||||| |||||||||    
T  36580421 gtgacacctcatttagggtgccacgtcagcgtagaccgagtcaaaattgactttgggggccaaaactgccacaaatgcaaaacttagggggcggttttgt 36580520  T
Q  436 ag 437  Q
    ||    
T  36580521 ag 36580522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 448 - 513
Target Start/End: Original strand, 23826281 - 23826346
Alignment:
Q  448 aaggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcctattttattt 513  Q
    |||||||||||||| |||||| | ||||||||| |||| ||||||||||||||||||| |||||||    
T  23826281 aaggggccaaaatcgcaacttcgtgaaagttaggggacaaaaactgctattaagcctaatttattt 23826346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 333 - 505
Target Start/End: Original strand, 15107135 - 15107305
Alignment:
Q  333 catgtgacatctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttt 432  Q
    |||||| || |||| |||| ||||||| |||  ||| ||| |||||||||||| ||||| || ||||||| ||||| ||| |||||||||||  ||||||    
T  15107135 catgtggcacctcacttagggtgccacatcagtgtagaccgagtcaaaattggcattggaggccaaaactgccacaaatgcaaaacttagggagcggttt 15107234  T
Q  433 tgtagtgnnnnnnnnaaggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagccta 505  Q
    ||||||         | ||||||||||||  |||||||| ||| |||| ||  ||||||||||||||||||||    
T  15107235 tgtagt--tttttttagggggccaaaatcgtaactttggaaaaattaggggggtaaaactgctattaagccta 15107305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 353 - 505
Target Start/End: Complemental strand, 35250269 - 35250117
Alignment:
Q  353 gtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagtgnnnnnnnnaaggg 452  Q
    |||||||||||  ||| ||| ||||||||||||  ||||||  |||||||  || | ||| ||||||||| || ||||||| ||||         |||||    
T  35250269 gtgccacgtcagtgtagaccgagtcaaaattggccttggggtccaaaactgtcaaagatgcaaaacttagagggcggttttatagtttttttcttaaggg 35250170  T
Q  453 gccaaaatcacaactttgggaaagttagaggactaaaactgctattaagccta 505  Q
     |||||||| ||||||||| ||||||||||| |||||||| ||||||||||||    
T  35250169 accaaaatcgcaactttggaaaagttagagggctaaaactactattaagccta 35250117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 343 - 438
Target Start/End: Original strand, 18186604 - 18186699
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    |||| |||| |||||||||||||||| ||  ||||||||||||  ||||||  ||||||| ||||| ||| |||||||| ||||||||||| ||||    
T  18186604 ctcacttagggtgccacgtcaacgtagactgagtcaaaattggccttggggaccaaaactgccacagatgcaaaacttaagggacggttttatagt 18186699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 343 - 438
Target Start/End: Complemental strand, 18504404 - 18504309
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    |||| |||| ||||||||||| |||| ||  ||||||||||||  || | || ||||||| ||||||||| |||||||||||| ||||||||||||    
T  18504404 ctcacttagggtgccacgtcagcgtagactgagtcaaaattggccttagaggccaaaactgccacatatgcaaaacttagggggcggttttgtagt 18504309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 351 - 504
Target Start/End: Complemental strand, 28350269 - 28350115
Alignment:
Q  351 gagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtag-tgnnnnnnnnaa 449  Q
    ||||||||| ||| |||| | | ||||||||||||| ||||||| ||||||| |||||   | |||||||||||| ||||||||||| |         |     
T  28350269 gagtgccacatcagcgtagatcgagtcaaaattggtcttgggggccaaaactgccacaggggcaaaacttagggggcggttttgtagttttttttcttag 28350170  T
Q  450 ggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcct 504  Q
    ||||||||||||  ||||| | ||||||||| || ||||||||||||||||||||    
T  28350169 ggggccaaaatcgtaacttcgtgaaagttagggggctaaaactgctattaagcct 28350115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 333 - 438
Target Start/End: Complemental strand, 36903433 - 36903329
Alignment:
Q  333 catgtgacatctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttt 432  Q
    |||||| || |||| |||| |||||| |||| |||| ||| ||||||||||||  ||| ||| ||||||| ||||| ||| |||||||||||| ||||||    
T  36903433 catgtggcacctcacttagggtgccatgtcagcgtagaccgagtcaaaattggccttgagggccaaaactgccacagatggaaaacttagggg-cggttt 36903335  T
Q  433 tgtagt 438  Q
    ||||||    
T  36903334 tgtagt 36903329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 343 - 438
Target Start/End: Complemental strand, 4049870 - 4049774
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaa-acttaggggacggttttgtagt 438  Q
    |||| |||| ||||||||||| |||| | | ||||||||||||  ||| ||||||||||| ||||| ||| ||| |||||||| |||||||||||||    
T  4049870 ctcacttagggtgccacgtcagcgtagatcgagtcaaaattggccttgagggtcaaaactgccacagatgcaaagacttagggaacggttttgtagt 4049774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 394 - 438
Target Start/End: Original strand, 40872351 - 40872395
Alignment:
Q  394 gtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||    
T  40872351 gtcaaaactgccacatatgcaaaacttaggggacggttttgtagt 40872395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 452 - 511
Target Start/End: Complemental strand, 5172562 - 5172503
Alignment:
Q  452 ggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcctattttat 511  Q
    ||||||||||||||||||   ||||||||||||||||||||| ||||||| ||| |||||    
T  5172562 ggccaaaatcacaactttaaaaaagttagaggactaaaactgttattaagtctaatttat 5172503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 450 - 501
Target Start/End: Complemental strand, 47909747 - 47909696
Alignment:
Q  450 ggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaag 501  Q
    ||||| |||||| |||||||||||||||||| || |||||||||||||||||    
T  47909747 ggggctaaaatcgcaactttgggaaagttagggggctaaaactgctattaag 47909696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 343 - 421
Target Start/End: Complemental strand, 8074035 - 8073957
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaactta 421  Q
    |||| |||||||||||||||| || | ||| | ||||||||||  ||||||| ||||||| ||||||||| ||||||||    
T  8074035 ctcacttagagtgccacgtcagcgaagaccgaatcaaaattggccttgggggccaaaactgccacatatgcaaaactta 8073957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 451 - 509
Target Start/End: Original strand, 17931988 - 17932046
Alignment:
Q  451 gggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcctatttt 509  Q
    ||||||||||| ||||||||| ||||| ||  | |||||||||||||||||||||||||    
T  17931988 gggccaaaatcgcaactttggaaaagtgaggaggctaaaactgctattaagcctatttt 17932046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 451 - 505
Target Start/End: Original strand, 28786019 - 28786073
Alignment:
Q  451 gggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagccta 505  Q
    ||||||||||||||||||||| |||||||  ||  ||||||||||||||||||||    
T  28786019 gggccaaaatcacaactttggaaaagttatggggttaaaactgctattaagccta 28786073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 370 - 436
Target Start/End: Complemental strand, 40790640 - 40790574
Alignment:
Q  370 accaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgta 436  Q
    |||||||||||||| || ||||||||||||||||||| ||||  || || |||||||| ||||||||    
T  40790640 accaagtcaaaatttgtcttgggggtcaaaactaccaaatatccaatacataggggactgttttgta 40790574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 360 - 505
Target Start/End: Complemental strand, 3318460 - 3318316
Alignment:
Q  360 gtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagtgnnnnnnnnaaggggccaaaa 459  Q
    ||||||||| ||| ||||||||||||| |||| |||||||| |  ||||  || |||||||| |||||||||||||| |         | ||| ||||||    
T  3318460 gtcaacgtagaccgagtcaaaattggttttggaggtcaaaaatgtcacaggtgcaaaacttaagggacggttttgtaat-ttttttttaggggaccaaaa 3318362  T
Q  460 tcacaactttgggaaagttagaggactaaaactgctattaagccta 505  Q
    || ||||||||| |||||||  || |||||||| ||||||||||||    
T  3318361 tcgcaactttggaaaagttaaggggctaaaactcctattaagccta 3318316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 370 - 438
Target Start/End: Original strand, 9500081 - 9500149
Alignment:
Q  370 accaagtcaaaattggtattgggggtcaaaactaccacatatgt-aaaacttaggggacggttttgtagt 438  Q
    ||||||||||||||||  ||||||| ||||||||||||| | || |||||||||||| ||||||||||||    
T  9500081 accaagtcaaaattggccttgggggccaaaactaccaca-aggtcaaaacttagggggcggttttgtagt 9500149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 396 - 505
Target Start/End: Original strand, 14247511 - 14247616
Alignment:
Q  396 caaaactaccacatatgtaaaacttaggggacggttttgtagtgnnnnnnnnaaggggccaaaatcacaactttgggaaagttagaggactaaaactgct 495  Q
    ||||||| |||||| || ||||||||| |||||||||||||||         |||||| | ||||| ||||||||| |||||||| ||| ||||||||||    
T  14247511 caaaactgccacatgtgcaaaacttagcggacggttttgtagt---ttttttaaggggtcgaaatcgcaactttggaaaagttagggga-taaaactgct 14247606  T
Q  496 attaagccta 505  Q
    ||||||||||    
T  14247607 attaagccta 14247616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 343 - 504
Target Start/End: Complemental strand, 15348111 - 15347953
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagtgnnn 442  Q
    |||| |||| ||||||| ||| |||| ||| |||||||||||   ||||||| || |||| ||||| ||| ||||||||||||  |||||||||||        
T  15348111 ctcacttagggtgccacatcagcgtagaccgagtcaaaattgaccttgggggccataacttccacagatgcaaaacttaggggt-ggttttgtagttttt 15348013  T
Q  443 nnnnnaaggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcct 504  Q
          ||||| ||||||| ||||||| |||||||||| || ||||||| ||||||||||||    
T  15348012 tctt--aggggtcaaaatcgcaactttaggaaagttagggggctaaaacggctattaagcct 15347953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 450 - 499
Target Start/End: Original strand, 21505878 - 21505927
Alignment:
Q  450 ggggccaaaatcacaactttgggaaagttagaggactaaaactgctatta 499  Q
    |||||||||||| ||||||||  |||||||| ||||||||||||||||||    
T  21505878 ggggccaaaatcgcaactttgaaaaagttaggggactaaaactgctatta 21505927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 357 - 502
Target Start/End: Complemental strand, 28472534 - 28472391
Alignment:
Q  357 cacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagtgnnnnnnnnaaggggcca 456  Q
    |||||||||||| ||| | ||||||||||| |||||||  |||||| ||||||| | ||||||||  || || |||||||||         | |||| ||    
T  28472534 cacgtcaacgtagaccgaatcaaaattggtcttgggggcgaaaactgccacataagcaaaacttatagggcgattttgtagt-tttttcttagggggtca 28472436  T
Q  457 aaatcacaactttgggaaagttagaggactaaaactgctattaagc 502  Q
    ||||| ||||||||| |||||||| || ||||||||||||||||||    
T  28472435 aaatcgcaactttggaaaagttag-gggctaaaactgctattaagc 28472391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 414 - 503
Target Start/End: Complemental strand, 36580363 - 36580274
Alignment:
Q  414 aaaacttaggggacggttttgtagtgnnnnnnnnaaggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcc 503  Q
    |||||||||||||||||||||||||         | ||| ||||||||||||||| | ||||||||| || | |||||||||||||||||    
T  36580363 aaaacttaggggacggttttgtagtttttttcttaggggaccaaaatcacaacttcgtgaaagttaggggccgaaaactgctattaagcc 36580274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 450 - 507
Target Start/End: Complemental strand, 45697540 - 45697483
Alignment:
Q  450 ggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcctatt 507  Q
    |||||||||||| |||||| | ||||||||| |||| ||||||| |||||||||||||    
T  45697540 ggggccaaaatcgcaacttcgagaaagttaggggacgaaaactgttattaagcctatt 45697483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 374 - 438
Target Start/End: Complemental strand, 15029191 - 15029127
Alignment:
Q  374 agtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    |||||||||||   ||||||| ||||||| |||||| || |||||||||||| ||||||||||||    
T  15029191 agtcaaaattgaccttgggggccaaaactgccacatgtgcaaaacttagggggcggttttgtagt 15029127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 354 - 406
Target Start/End: Complemental strand, 26763596 - 26763544
Alignment:
Q  354 tgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactacca 406  Q
    |||||| |||||| ||||||||||||||||||  ||||||| |||||||||||    
T  26763596 tgccacatcaacgaaaaccaagtcaaaattggccttgggggccaaaactacca 26763544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 357 - 497
Target Start/End: Complemental strand, 45718045 - 45717906
Alignment:
Q  357 cacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagtgnnnnnnnnaaggggcca 456  Q
    |||||||||||| ||| ||||||||||| | || ||||||||||||  |||| ||| |||||||| | || | |||||||||         |||| ||||    
T  45718045 cacgtcaacgtagaccgagtcaaaattgatcttaggggtcaaaactgacacagatgcaaaactta-gagatgattttgtagtttttttcttaaggagcca 45717947  T
Q  457 aaatcacaactttgggaaagttagaggactaaaactgctat 497  Q
    ||||||||||||||| ||| ||||  | |||||||||||||    
T  45717946 aaatcacaactttggaaaaattaggaggctaaaactgctat 45717906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 450 - 509
Target Start/End: Original strand, 3247432 - 3247491
Alignment:
Q  450 ggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcctatttt 509  Q
    ||||||||||||||||||| | ||||||||| |||| |||| || |||||||| ||||||    
T  3247432 ggggccaaaatcacaacttcgtgaaagttaggggacgaaaattgttattaagcttatttt 3247491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 391 - 438
Target Start/End: Complemental strand, 3381975 - 3381928
Alignment:
Q  391 ggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    |||| ||||||| ||||||||| |||||||||||| ||||||||||||    
T  3381975 ggggccaaaactgccacatatgcaaaacttagggggcggttttgtagt 3381928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 343 - 438
Target Start/End: Original strand, 6726408 - 6726502
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    |||| |||| ||||||||||| |||||||  |||||||||||   ||||||| ||||||| |||||| || ||||||||||||  | |||||||||    
T  6726408 ctcacttagggtgccacgtcagcgtaaactgagtcaaaattgtccttggggg-caaaactgccacatgtgcaaaacttagggggtgattttgtagt 6726502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 454 - 505
Target Start/End: Original strand, 6792061 - 6792112
Alignment:
Q  454 ccaaaatcacaactttgggaaagttagaggactaaaactgctattaagccta 505  Q
    |||||||| ||||||||| |||||||| || |||||||||||||||| ||||    
T  6792061 ccaaaatcgcaactttggaaaagttagggggctaaaactgctattaaaccta 6792112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 454 - 505
Target Start/End: Complemental strand, 15107041 - 15106990
Alignment:
Q  454 ccaaaatcacaactttgggaaagttagaggactaaaactgctattaagccta 505  Q
    |||||||||||||||| |  |||||||||| |||||||||||||||| ||||    
T  15107041 ccaaaatcacaactttagacaagttagagggctaaaactgctattaaaccta 15106990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 450 - 505
Target Start/End: Complemental strand, 20505151 - 20505096
Alignment:
Q  450 ggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagccta 505  Q
    ||||||||| || |||||||| ||||||||| || |||||||||||||||| ||||    
T  20505151 ggggccaaagtcgcaactttgagaaagttagggggctaaaactgctattaaaccta 20505096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 343 - 438
Target Start/End: Original strand, 28785908 - 28786003
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    |||| |||| ||| ||||||| |||| ||| |||||||||| |  ||||||||||||||| ||| | ||| |||||||| ||| | ||||||||||    
T  28785908 ctcacttagggtgtcacgtcagcgtagaccgagtcaaaattagccttgggggtcaaaactgccataaatgcaaaacttatggggcagttttgtagt 28786003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 450 - 504
Target Start/End: Original strand, 4049982 - 4050036
Alignment:
Q  450 ggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcct 504  Q
    ||||||||||||||||||| | ||||||||  || | ||||||||||||||||||    
T  4049982 ggggccaaaatcacaacttcgtgaaagttaaggggcgaaaactgctattaagcct 4050036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 448 - 505
Target Start/End: Complemental strand, 4049761 - 4049704
Alignment:
Q  448 aaggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagccta 505  Q
    |||||||||||||| ||||||| | |||||||| || ||||||||||| |||| ||||    
T  4049761 aaggggccaaaatcgcaactttagaaaagttagtgggctaaaactgctgttaaaccta 4049704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 452 - 504
Target Start/End: Complemental strand, 14247345 - 14247293
Alignment:
Q  452 ggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcct 504  Q
    ||||||||||||||||| | |||||||||  | | ||||||||||||||||||    
T  14247345 ggccaaaatcacaacttcgtgaaagttaggtggcgaaaactgctattaagcct 14247293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 451 - 519
Target Start/End: Original strand, 36903529 - 36903596
Alignment:
Q  451 gggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcctattttattttagtag 519  Q
    ||||||||||| |||| |||  |||||||| ||  |||||||||||||||||| | |||||||||||||    
T  36903529 gggccaaaatcgcaacattgaaaaagttagggggttaaaactgctattaagccga-tttattttagtag 36903596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 8e-23; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 343 - 505
Target Start/End: Original strand, 30539144 - 30539306
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagtgnnn 442  Q
    |||| |||| ||||||||||| | || ||| | |||||||||  |||||||| ||||||| ||||| ||| |||||||||||||||||||||||||        
T  30539144 ctcacttagggtgccacgtcagcatagaccgaatcaaaattgacattgggggccaaaactgccacagatgcaaaacttaggggacggttttgtagttttt 30539243  T
Q  443 nnnnnaagggg-ccaaaatcacaactttgggaaagttagaggactaaaactgctattaagccta 505  Q
          ||||| |||||||| ||||||||||||||||| ||| |||||||||||||||||||||    
T  30539244 tttcttaggggaccaaaatcgcaactttgggaaagtta-agggctaaaactgctattaagccta 30539306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 348 - 438
Target Start/End: Original strand, 37813249 - 37813339
Alignment:
Q  348 ttagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    |||| ||||||||||| |||| ||| ||||||||||||  ||||||| ||||||| ||||| ||| |||||||||||| ||||||||||||    
T  37813249 ttagggtgccacgtcagcgtagaccgagtcaaaattggccttgggggccaaaactgccacagatgcaaaacttagggggcggttttgtagt 37813339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 343 - 505
Target Start/End: Original strand, 41487363 - 41487525
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagtgnnn 442  Q
    |||| |||| ||| ||||||| |||| ||| ||||||||||||| ||||||| ||||||  | |||  || |||||||||||| ||||||||||||        
T  41487363 ctcacttagcgtgtcacgtcagcgtagaccgagtcaaaattggtcttgggggccaaaacagctacagttgcaaaacttagggggcggttttgtagttttt 41487462  T
Q  443 nnnnnaaggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagccta 505  Q
          | |||| |||||| ||||||||| ||||||||||| |||||||||||||||| ||||    
T  41487463 tttcttaagggctaaaatcgcaactttggaaaagttagagggctaaaactgctattaaaccta 41487525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 353 - 505
Target Start/End: Complemental strand, 20853527 - 20853376
Alignment:
Q  353 gtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagtgnnnnnnnnaaggg 452  Q
    |||||||||||||||| | | | ||||||||| | ||||||| ||||||| ||||||||| ||||||||||||  |||||||||||         | |||    
T  20853527 gtgccacgtcaacgtagatctattcaaaattgatcttgggggccaaaactgccacatatgcaaaacttagggggtggttttgtagt-ttttttttagggg 20853429  T
Q  453 gccaaaatcacaactttgggaaagttagaggactaaaactgctattaagccta 505  Q
    | ||||||| ||||||   ||||||||| || |||||||||||||||||||||    
T  20853428 gtcaaaatcgcaacttcaagaaagttagggggctaaaactgctattaagccta 20853376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 343 - 438
Target Start/End: Original strand, 3676281 - 3676376
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    |||| |||| ||||||||||| |||| ||| ||||||||||||| ||||||  ||||||| ||||| ||| ||||||||| || ||||||||||||    
T  3676281 ctcacttagggtgccacgtcagcgtagaccgagtcaaaattggttttggggaccaaaactgccacagatgcaaaacttagtgggcggttttgtagt 3676376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 343 - 504
Target Start/End: Original strand, 29044700 - 29044860
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagtgnnn 442  Q
    |||| |||| || |||||||| |||| ||| ||||||||||||  ||||||| ||||||| ||||| ||| |||||||| ||||| ||||||||| |       
T  29044700 ctcatttagggtaccacgtcagcgtagaccgagtcaaaattggccttgggggccaaaactgccacaaatgcaaaacttatgggacagttttgtag-gttt 29044798  T
Q  443 nnnnnaaggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcct 504  Q
          |||| ||||||||  |||||| || ||||||| || ||||||||||||||||||||    
T  29044799 tttcttagggaccaaaatcgtaactttagggaagttagggggctaaaactgctattaagcct 29044860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 450 - 506
Target Start/End: Original strand, 28349568 - 28349624
Alignment:
Q  450 ggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcctat 506  Q
    |||||||||||| |||||||||||||||||| || |||||||| |||||||||||||    
T  28349568 ggggccaaaatcgcaactttgggaaagttagggggctaaaactactattaagcctat 28349624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 336 - 439
Target Start/End: Complemental strand, 21486822 - 21486719
Alignment:
Q  336 gtgacatctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgt 435  Q
    |||||| |||| |||| ||| ||||||| |||| ||||||||||||||| | |||| || ||||| | |||||  || |||||||||||| |||||||||    
T  21486822 gtgacacctcacttagggtgtcacgtcagcgtagaccaagtcaaaattgatcttggaggccaaaaatgccacaggtgcaaaacttagggggcggttttgt 21486723  T
Q  436 agtg 439  Q
    ||||    
T  21486722 agtg 21486719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 343 - 503
Target Start/End: Original strand, 6807322 - 6807480
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagtgnnn 442  Q
    |||| |||| ||||||||||| |||| ||  |||||||||||   ||| ||| ||||||| ||||| ||| ||||||||||||  |||||||||||        
T  6807322 ctcacttagggtgccacgtcagcgtagacagagtcaaaattgaccttgagggacaaaactgccacaaatgcaaaacttagggggtggttttgtagttttt 6807421  T
Q  443 nnnnnaaggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcc 503  Q
         |  ||| ||||||  |||||||||||||||||| ||||||||| ||||||||||||    
T  6807422 tttaga--gggtcaaaattgcaactttgggaaagttaggggactaaaattgctattaagcc 6807480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 353 - 438
Target Start/End: Original strand, 16982774 - 16982858
Alignment:
Q  353 gtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    ||||||||||| |||| || |||||||||||||  ||||||| |||||||  |||| ||| |||||||||||| ||||||||||||    
T  16982774 gtgccacgtcagcgtagactaagtcaaaattggccttggggg-caaaactggcacagatgcaaaacttagggggcggttttgtagt 16982858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 353 - 438
Target Start/End: Complemental strand, 37940061 - 37939977
Alignment:
Q  353 gtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    ||||||||||| |||| ||| ||||||||||||| |||| |  ||||||| ||||||||| ||||||||||||  |||||||||||    
T  37940061 gtgccacgtcagcgtagaccgagtcaaaattggtcttggtgc-caaaactgccacatatgcaaaacttagggggtggttttgtagt 37939977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 341 - 438
Target Start/End: Original strand, 39889924 - 39890021
Alignment:
Q  341 atctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    |||||| |||||||| ||||||| |||||||| |||||||||||  ||||| || ||||| | ||||| ||| ||||||||| || ||| ||||||||    
T  39889924 atctcacttagagtgtcacgtcagcgtaaaccgagtcaaaattgacattggaggccaaaattgccacagatgcaaaacttagagggcggatttgtagt 39890021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 333 - 438
Target Start/End: Complemental strand, 45177372 - 45177267
Alignment:
Q  333 catgtgacatctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttt 432  Q
    ||||||||| |||| |||| |||||||||||  ||| ||| |||||||||| |  ||| ||| |||||||  |||| ||| ||||||||||||||| |||    
T  45177372 catgtgacacctcacttagggtgccacgtcagtgtagaccgagtcaaaattagccttgagggccaaaactgtcacagatgcaaaacttaggggacgattt 45177273  T
Q  433 tgtagt 438  Q
    ||||||    
T  45177272 tgtagt 45177267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 450 - 504
Target Start/End: Original strand, 23702395 - 23702449
Alignment:
Q  450 ggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcct 504  Q
    ||||| |||||| ||||||| |||||||||| || ||||||||||||||||||||    
T  23702395 ggggctaaaatcgcaacttttggaaagttagggggctaaaactgctattaagcct 23702449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 457 - 505
Target Start/End: Complemental strand, 27545390 - 27545342
Alignment:
Q  457 aaatcacaactttgggaaagttagaggactaaaactgctattaagccta 505  Q
    ||||| ||||||||| ||||||||| | |||||||||||||||||||||    
T  27545390 aaatcgcaactttggaaaagttagacggctaaaactgctattaagccta 27545342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 340 - 399
Target Start/End: Original strand, 36688156 - 36688215
Alignment:
Q  340 catctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaa 399  Q
    ||||||| |||| ||||||||||| |||| ||||| ||||||||||| ||||||| ||||    
T  36688156 catctcacttagggtgccacgtcagcgtagaccaaatcaaaattggtcttgggggccaaa 36688215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 374 - 421
Target Start/End: Original strand, 44269303 - 44269350
Alignment:
Q  374 agtcaaaattggtattgggggtcaaaactaccacatatgtaaaactta 421  Q
    |||||||||||| |||||||| ||||||||||||| ||| ||||||||    
T  44269303 agtcaaaattggcattgggggccaaaactaccacaaatgcaaaactta 44269350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 450 - 500
Target Start/End: Complemental strand, 25897043 - 25896993
Alignment:
Q  450 ggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaa 500  Q
    |||||||||||| ||||||||  |||||||| || ||||||||||||||||    
T  25897043 ggggccaaaatcgcaactttgaaaaagttagggggctaaaactgctattaa 25896993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 376 - 501
Target Start/End: Complemental strand, 26823954 - 26823828
Alignment:
Q  376 tcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagtgnnnnnnnn-aaggggccaaaatcacaactttgggaa 474  Q
    |||||||||| |||||||  ||||||| ||||| ||| ||||||||||||  | |||||||||          |||||| |||||||  ||||||| |||    
T  26823954 tcaaaattggcattggggcccaaaactgccacaaatgcaaaacttagggggtgattttgtagttttttttcttaaggggtcaaaatcgtaactttgagaa 26823855  T
Q  475 agttagaggactaaaactgctattaag 501  Q
    |||||||||  ||||||||||||||||    
T  26823854 agttagagggttaaaactgctattaag 26823828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 449 - 502
Target Start/End: Original strand, 3676389 - 3676442
Alignment:
Q  449 aggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagc 502  Q
    ||||| |||||| | |||||||||||| |||||||  |||||||||||||||||    
T  3676389 aggggtcaaaattataactttgggaaaattagagggttaaaactgctattaagc 3676442  T

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Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 360 - 505
Target Start/End: Original strand, 32071185 - 32071327
Alignment:
Q  360 gtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagtgnnnnnnnnaaggggccaaaa 459  Q
    |||| |||| ||| ||||||||||| | |||| |  |||||||  || ||||| |||||||||||| ||||||||||||          ||||| |||||    
T  32071185 gtcagcgtagaccgagtcaaaattgttcttggagaccaaaactgtcatatatgcaaaacttagggggcggttttgtagttttttctt--aggggtcaaaa 32071282  T
Q  460 tcacaactttgggaaagttagaggactaaaactgctattaagccta 505  Q
    || ||||||| | |||||||| || |||||||||||||||||||||    
T  32071283 tcgcaactttagaaaagttagggg-ctaaaactgctattaagccta 32071327  T

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Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 450 - 503
Target Start/End: Original strand, 36688258 - 36688311
Alignment:
Q  450 ggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcc 503  Q
    |||| ||||||||||||||||  |||||||| ||  ||||||||||||||||||    
T  36688258 ggggtcaaaatcacaactttgaaaaagttagggggttaaaactgctattaagcc 36688311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 450 - 514
Target Start/End: Complemental strand, 17070960 - 17070896
Alignment:
Q  450 ggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcctattttatttt 514  Q
    |||||||||||| |||||| | ||||||||  || | |||||||||||||||||| |||| ||||    
T  17070960 ggggccaaaatcgcaacttcgtgaaagttaaggggcgaaaactgctattaagccttttttttttt 17070896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 450 - 514
Target Start/End: Original strand, 17577312 - 17577376
Alignment:
Q  450 ggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcctattttatttt 514  Q
    |||||||||||| |||||| | ||||||||  || | |||||||||||||||||| |||| ||||    
T  17577312 ggggccaaaatcgcaacttcgtgaaagttaaggggcgaaaactgctattaagccttttttttttt 17577376  T

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Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 390 - 438
Target Start/End: Complemental strand, 29657817 - 29657769
Alignment:
Q  390 gggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    ||||| ||||||| ||||||||| |||| ||||||| ||||||||||||    
T  29657817 gggggccaaaactgccacatatgcaaaatttagggggcggttttgtagt 29657769  T

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Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 370 - 438
Target Start/End: Original strand, 42218424 - 42218492
Alignment:
Q  370 accaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    |||||||||||||||   | ||||||||||||| ||||    | |||||||||||||||||||||||||    
T  42218424 accaagtcaaaattgacctagggggtcaaaactgccactggggcaaaacttaggggacggttttgtagt 42218492  T

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Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 352 - 436
Target Start/End: Original strand, 45309483 - 45309567
Alignment:
Q  352 agtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgta 436  Q
    |||||||||||| |||  ||||||||||||||||| | ||||| ||||||| ||| ||||  || || |||||| | ||||||||    
T  45309483 agtgccacgtcagcgttgaccaagtcaaaattggtctagggggccaaaactgccaaatatccaatacatagggggctgttttgta 45309567  T

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Target: scaffold0194 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 343 - 513
Target Start/End: Original strand, 25053 - 25218
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagtgnnn 442  Q
    |||| |||||||||||||||| || | | | ||||||||||||| ||||||  |||||||||| |||||| |||||||||||| ||||||||||||        
T  25053 ctcacttagagtgccacgtcagcgaagatcgagtcaaaattggttttggggc-caaaactaccgcatatgcaaaacttagggggcggttttgtagt---- 25147  T
Q  443 nnnnnaaggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcctattttattt 513  Q
         | ||||| |||||||||||||| | ||||||||| | ||||||||||||||| |||||||| ||||    
T  25148 tttttagggggctaaaatcacaactttagaaaagttagaaggctaaaactgctattatgcctatttgattt 25218  T

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Target: chr1 (Bit Score: 53; Significance: 5e-21; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 357 - 504
Target Start/End: Complemental strand, 3377648 - 3377500
Alignment:
Q  357 cacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtag-tgnnnnnnnnaaggggcc 455  Q
    ||||||| |||| ||| ||||||||||||  ||||||| ||||||| ||||| ||| |||||||||||| ||||||||||| |         | ||||||    
T  3377648 cacgtcagcgtagaccgagtcaaaattggccttgggggccaaaactgccacaaatgcaaaacttagggggcggttttgtagttttttttcttagggggcc 3377549  T
Q  456 aaaatcacaactttgggaaagttagaggactaaaactgctattaagcct 504  Q
    |||||| ||||||||| |||||||| || ||||||||||||||||||||    
T  3377548 aaaatcgcaactttggaaaagttagggggctaaaactgctattaagcct 3377500  T

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Target: chr1; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 333 - 503
Target Start/End: Complemental strand, 14978967 - 14978797
Alignment:
Q  333 catgtgacatctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttt 432  Q
    |||||| || |||| |||| ||||||| ||| |||| ||||| ||||||||||  || |||| |||||||||||||  || |||||||||||| | ||||    
T  14978967 catgtggcacctcacttagggtgccacatcagcgtagaccaattcaaaattggcctttggggccaaaactaccacaggtgcaaaacttagggggcagttt 14978868  T
Q  433 tgtagtgnnnnnnnnaaggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcc 503  Q
    ||||||         ||||  |||||||| ||||||||| |||||||| || |||||||||||||||||||    
T  14978867 tgtagtttttttttgaaggacccaaaatcgcaactttggaaaagttagggggctaaaactgctattaagcc 14978797  T

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Target: chr1; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 414 - 503
Target Start/End: Original strand, 3377736 - 3377825
Alignment:
Q  414 aaaacttaggggacggttttgtagtgnnnnnnnnaaggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcc 503  Q
    |||||||||||||||||||||||||         | ||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  3377736 aaaacttaggggacggttttgtagtttttttcctagggggccaaaatcacaactttgggaaagttagggggctaaaactgctattaagcc 3377825  T

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Target: chr1; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 343 - 438
Target Start/End: Original strand, 8301498 - 8301593
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    ||||||||| ||| ||||||| |||| |   ||||||||||||| ||||||||||||||| ||||| ||| |||| ||||||||||||||||||||    
T  8301498 ctcaattagggtgtcacgtcagcgtagattgagtcaaaattggtcttgggggtcaaaactgccacagatgcaaaatttaggggacggttttgtagt 8301593  T

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Target: chr1; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 343 - 437
Target Start/End: Original strand, 6569660 - 6569754
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtag 437  Q
    |||| |||||||||||||||| |||| ||| | ||||||||||| ||| ||| ||||||| ||||| |||||||||||| ||| |||||||||||    
T  6569660 ctcacttagagtgccacgtcagcgtagaccgaatcaaaattggtcttgagggccaaaactgccacaaatgtaaaacttaaggggcggttttgtag 6569754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 333 - 438
Target Start/End: Complemental strand, 23220737 - 23220632
Alignment:
Q  333 catgtgacatctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttt 432  Q
    |||||| || |||| |||| ||||||||||| |||| ||| | ||||||||||| ||||||| ||||||  |||||| || |||||||| ||| ||||||    
T  23220737 catgtggcacctcacttagggtgccacgtcagcgtagaccgaatcaaaattggtcttgggggccaaaaccgccacatgtgcaaaacttaaggggcggttt 23220638  T
Q  433 tgtagt 438  Q
    ||||||    
T  23220637 tgtagt 23220632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 352 - 436
Target Start/End: Complemental strand, 6320715 - 6320631
Alignment:
Q  352 agtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgta 436  Q
    |||| ||||||| |||| ||| |||| |||||||| |  |||||||||||||||||| ||| |||| ||||||||||||||||||    
T  6320715 agtgtcacgtcagcgtagaccgagtcgaaattggtctaaggggtcaaaactaccacagatgcaaaatttaggggacggttttgta 6320631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 343 - 502
Target Start/End: Original strand, 16874656 - 16874816
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagtgnnn 442  Q
    |||| |||| ||||||||||| |||| ||| ||||||||||||  ||||| | ||||||| ||||| ||| |||||||| ||| ||||||||||||        
T  16874656 ctcacttagggtgccacgtcagcgtagaccgagtcaaaattggccttgggagccaaaactgccacagatgcaaaacttatggggcggttttgtagttttt 16874755  T
Q  443 nnnnna-aggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagc 502  Q
         | |||| |||||||  |||||||| ||||||||| ||  |||||||||||||||||    
T  16874756 ttcttagagggtccaaaattgcaactttgagaaagttagggggttaaaactgctattaagc 16874816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 348 - 436
Target Start/End: Complemental strand, 44672468 - 44672380
Alignment:
Q  348 ttagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgta 436  Q
    |||| ||||||||||| |||| ||| | ||||||||| | ||||| | ||||||| ||||||||| |||||||||||| ||||||||||    
T  44672468 ttagggtgccacgtcagcgtagaccgaatcaaaattgatcttgggcgccaaaactgccacatatgcaaaacttagggggcggttttgta 44672380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 343 - 438
Target Start/End: Complemental strand, 17760845 - 17760750
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    |||| |||| |||||||||||  ||| ||| ||||||||||| | |||| || ||||||| ||||||||| ||||||||||||  |||||||||||    
T  17760845 ctcatttagggtgccacgtcagtgtagaccgagtcaaaattgatcttggtggccaaaactgccacatatgcaaaacttagggggtggttttgtagt 17760750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 343 - 425
Target Start/End: Original strand, 16298210 - 16298292
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttagggg 425  Q
    |||| |||||||| ||||||| |||| ||||||||||||||| ||||||| | ||||||| ||||| ||| ||||| ||||||    
T  16298210 ctcacttagagtgtcacgtcagcgtagaccaagtcaaaattgatattgggagccaaaactgccacagatgcaaaacatagggg 16298292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 348 - 438
Target Start/End: Original strand, 39642366 - 39642456
Alignment:
Q  348 ttagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    |||| ||||| ||||| | || ||| ||||||||||||  ||||||| ||||||| ||||| ||| |||||||||||| ||||||||||||    
T  39642366 ttagggtgccgcgtcagcatagaccgagtcaaaattggctttgggggccaaaactgccacaaatgcaaaacttagggggcggttttgtagt 39642456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 370 - 438
Target Start/End: Original strand, 30849410 - 30849478
Alignment:
Q  370 accaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    ||||||| ||||||||  ||| ||| |||||||| |||| ||| |||||||||||||||||||||||||    
T  30849410 accaagttaaaattggccttgtgggccaaaactatcacagatgcaaaacttaggggacggttttgtagt 30849478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 365 - 500
Target Start/End: Complemental strand, 46572963 - 46572830
Alignment:
Q  365 cgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagtgnnnnnnnnaaggggccaaaatcaca 464  Q
    |||| ||||||||||||||||  ||||||  | ||||| ||||| ||| |||||||||||||||||||||||||          ||||||||||||  ||    
T  46572963 cgtagaccaagtcaaaattggccttgggg--ccaaactgccacaaatgcaaaacttaggggacggttttgtagttttttttcttaggggccaaaattgca 46572866  T
Q  465 actttgggaaagttagaggactaaaactgctattaa 500  Q
    | ||||||||| ||||  | ||||||||||||||||    
T  46572865 attttgggaaaattaggaggctaaaactgctattaa 46572830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 333 - 436
Target Start/End: Original strand, 46505313 - 46505416
Alignment:
Q  333 catgtgacatctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttt 432  Q
    |||||| || |||| |||| ||| |||||||||||||||| || |||||||||| ||||||| || |||| || || ||| |||||||| || || ||||    
T  46505313 catgtggcacctcacttagggtgtcacgtcaacgtaaaccgagccaaaattggtcttgggggccagaactgccgcaaatgcaaaacttatggaacagttt 46505412  T
Q  433 tgta 436  Q
    ||||    
T  46505413 tgta 46505416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 348 - 438
Target Start/End: Original strand, 49426151 - 49426240
Alignment:
Q  348 ttagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    |||| ||| ||||||| |||| |||||||||||||||| ||| |||| ||||||| ||||| ||| |||||||| || || ||||||||||    
T  49426151 ttagggtgtcacgtcagcgtagaccaagtcaaaattggcatt-ggggccaaaactgccacaaatgcaaaacttaaggaacagttttgtagt 49426240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 348 - 420
Target Start/End: Original strand, 14190700 - 14190772
Alignment:
Q  348 ttagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaactt 420  Q
    |||||||||||| ||| |||| ||| |||||||||||| ||||| || ||||||| ||||| ||| |||||||    
T  14190700 ttagagtgccacatcagcgtagaccgagtcaaaattggcattggaggccaaaactgccacagatgcaaaactt 14190772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 454 - 506
Target Start/End: Original strand, 15659259 - 15659311
Alignment:
Q  454 ccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcctat 506  Q
    |||||||||||||||||| |||||||| ||  ||||||||||||||| |||||    
T  15659259 ccaaaatcacaactttggaaaagttaggggcttaaaactgctattaaacctat 15659311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 449 - 497
Target Start/End: Original strand, 25085650 - 25085698
Alignment:
Q  449 aggggccaaaatcacaactttgggaaagttagaggactaaaactgctat 497  Q
    ||||||||||||||||||||||| |||||||| || |||||| ||||||    
T  25085650 aggggccaaaatcacaactttggaaaagttagggggctaaaattgctat 25085698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 455 - 499
Target Start/End: Complemental strand, 25486261 - 25486217
Alignment:
Q  455 caaaatcacaactttgggaaagttagaggactaaaactgctatta 499  Q
    |||||||||||||||| ||||||||  ||||||||||||||||||    
T  25486261 caaaatcacaactttgagaaagttaagggactaaaactgctatta 25486217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 448 - 499
Target Start/End: Complemental strand, 6320613 - 6320562
Alignment:
Q  448 aaggggccaaaatcacaactttgggaaagttagaggactaaaactgctatta 499  Q
    |||||||||||||| ||||||| | ||||||||||| |||||||||| ||||    
T  6320613 aaggggccaaaatcgcaactttagaaaagttagagggctaaaactgcaatta 6320562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 450 - 509
Target Start/End: Complemental strand, 51250538 - 51250479
Alignment:
Q  450 ggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcctatttt 509  Q
    |||||||||||| ||||||||  |||||||| || ||||||||| |||||||||| ||||    
T  51250538 ggggccaaaatcgcaactttgaaaaagttagggggctaaaactgttattaagcctttttt 51250479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 452 - 506
Target Start/End: Complemental strand, 12960897 - 12960843
Alignment:
Q  452 ggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcctat 506  Q
    |||||||||| ||||||||  |||||||| || ||||||||| ||||||||||||    
T  12960897 ggccaaaatcgcaactttgaaaaagttagcgggctaaaactgttattaagcctat 12960843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 450 - 504
Target Start/End: Complemental strand, 17760735 - 17760681
Alignment:
Q  450 ggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcct 504  Q
    |||||||||||| |||||||| | ||||||| || ||||| ||||||||||||||    
T  17760735 ggggccaaaatcgcaactttgaggaagttagggggctaaagctgctattaagcct 17760681  T

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Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 454 - 504
Target Start/End: Original strand, 46573092 - 46573142
Alignment:
Q  454 ccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcct 504  Q
    |||||||| |||||| |  ||||||||||||| ||||||||||||||||||    
T  46573092 ccaaaatcgcaacttcgtaaaagttagaggacaaaaactgctattaagcct 46573142  T

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Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 343 - 421
Target Start/End: Original strand, 46912344 - 46912422
Alignment:
Q  343 ctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaactta 421  Q
    |||| |||| ||||||||||| |||||||  |||||||||||| ||| |||| ||||||| ||| | ||| ||||||||    
T  46912344 ctcatttagggtgccacgtcagcgtaaacagagtcaaaattggcattaggggccaaaactgccatagatgcaaaactta 46912422  T

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Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 333 - 438
Target Start/End: Original strand, 12960988 - 12961093
Alignment:
Q  333 catgtgacatctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttt 432  Q
    |||||| ||||||| |||| ||| ||||||| |||| ||| ||||||||||||  || || | ||||||| |||||  || |||| |||||||||  |||    
T  12960988 catgtggcatctcacttagggtgtcacgtcagcgtagaccgagtcaaaattggcctttggagccaaaactgccacagttgcaaaatttaggggacaattt 12961087  T
Q  433 tgtagt 438  Q
    ||||||    
T  12961088 tgtagt 12961093  T

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Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 450 - 507
Target Start/End: Complemental strand, 17692780 - 17692723
Alignment:
Q  450 ggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcctatt 507  Q
    ||||| ||||||||||||||| ||||||||| ||  ||||| ||||||||| ||||||    
T  17692780 ggggctaaaatcacaactttgagaaagttagggggttaaaattgctattaaacctatt 17692723  T

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Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 357 - 438
Target Start/End: Original strand, 23891802 - 23891882
Alignment:
Q  357 cacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    ||||||| |||| ||| ||||||||||||| ||||| | ||||||| |||||||||  ||| |||  |||||||||||||||    
T  23891802 cacgtcagcgtagaccgagtcaaaattggtcttgggagccaaaactgccacatatgcgaaagtta-tggacggttttgtagt 23891882  T

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Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 451 - 504
Target Start/End: Complemental strand, 39642252 - 39642199
Alignment:
Q  451 gggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcct 504  Q
    ||||||||||| |||||| | ||||||||| || | ||||||||||||||||||    
T  39642252 gggccaaaatcgcaacttcgtgaaagttagggggcgaaaactgctattaagcct 39642199  T

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Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 450 - 502
Target Start/End: Original strand, 5287835 - 5287887
Alignment:
Q  450 ggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagc 502  Q
    |||||||||||| |||||||| ||||||||  ||  |||||||||||||||||    
T  5287835 ggggccaaaatcgcaactttgagaaagttaaggggttaaaactgctattaagc 5287887  T

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Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 449 - 505
Target Start/End: Complemental strand, 25085453 - 25085397
Alignment:
Q  449 aggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagccta 505  Q
    ||||| ||||||| |||||||  ||||||||| || | |||||||||||||||||||    
T  25085453 aggggtcaaaatcgcaactttatgaaagttagggggcgaaaactgctattaagccta 25085397  T

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Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 450 - 502
Target Start/End: Complemental strand, 42924381 - 42924329
Alignment:
Q  450 ggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagc 502  Q
    |||| |||||||||||||| | |||||||||||| | |||||| |||||||||    
T  42924381 ggggtcaaaatcacaacttcgtgaaagttagagggcaaaaactactattaagc 42924329  T

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Target: scaffold0328 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 357 - 500
Target Start/End: Complemental strand, 9558 - 9415
Alignment:
Q  357 cacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagtgnnnnnnnnaaggggcca 456  Q
    ||||||| | || ||| ||||||||||||  |||||||  |||||| ||||||||| |||||||||||||||||||||||||         |  |||| |    
T  9558 cacgtcagcctagaccgagtcaaaattggccttgggggctaaaactgccacatatgcaaaacttaggggacggttttgtagtttttttcttagagggcaa 9459  T
Q  457 aaatcacaactttgggaaagttagaggactaaaactgctattaa 500  Q
    ||||||||||||||||||| |||| || ||||||||||||||||    
T  9458 aaatcacaactttgggaaaattagggggctaaaactgctattaa 9415  T

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Target: scaffold0248 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 337 - 438
Target Start/End: Complemental strand, 570 - 469
Alignment:
Q  337 tgacatctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgta 436  Q
    ||||| |||| |||| |||||||||||   || ||| ||||||||||||| ||||||| ||||||| ||||||||||||||||||||||  |||||||||    
T  570 tgacacctcatttagggtgccacgtcagtatagaccgagtcaaaattggtcttgggggccaaaactgccacatatgtaaaacttagggggtggttttgta 471  T
Q  437 gt 438  Q
    ||    
T  470 gt 469  T

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Target: scaffold0515 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 450 - 509
Target Start/End: Complemental strand, 3692 - 3633
Alignment:
Q  450 ggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcctatttt 509  Q
    |||||||||||| |||||||||||||||||| || |||||||||||||||||||||||||    
T  3692 ggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagcctatttt 3633  T

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Target: scaffold0306 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 450 - 509
Target Start/End: Complemental strand, 3692 - 3633
Alignment:
Q  450 ggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcctatttt 509  Q
    |||||||||||| |||||||||||||||||| || |||||||||||||||||||||||||    
T  3692 ggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagcctatttt 3633  T

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Target: scaffold0137 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 336 - 515
Target Start/End: Complemental strand, 20081 - 19902
Alignment:
Q  336 gtgacatctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgt 435  Q
    |||||| |||| |||| ||||||||| | |||| | | ||||||||||||  ||||||| ||||||| ||||| ||| ||||||||| ||||| ||||||    
T  20081 gtgacacctcacttagggtgccacgttagcgtagatcgagtcaaaattggctttgggggccaaaactgccacagatgcaaaacttagtggacgattttgt 19982  T
Q  436 agtgnnnnnnnnaaggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcctattttatttta 515  Q
    |||          |||||||||||||||||||||   ||| |||| ||  ||||||||||||||||| | ||||||||||    
T  19981 agttttttttcttaggggccaaaatcacaactttaaaaaatttagggggttaaaactgctattaagctttttttatttta 19902  T

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Target: scaffold1458 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1458
Description:

Target: scaffold1458; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 450 - 509
Target Start/End: Complemental strand, 1524 - 1465
Alignment:
Q  450 ggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcctatttt 509  Q
    |||||||||||| |||||||| ||||||||| || |||||||||||||||||||||||||    
T  1524 ggggccaaaatctcaactttgtgaaagttagggggctaaaactgctattaagcctatttt 1465  T

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Target: scaffold0015 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 336 - 438
Target Start/End: Complemental strand, 77029 - 76928
Alignment:
Q  336 gtgacatctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgt 435  Q
    |||||| |||| |||| ||||||||||| |||| ||| ||||||||||||  ||||||| ||||||| ||||| ||| |||||||||||| ||| |||||    
T  77029 gtgacacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggccttggggg-caaaactgccacaaatgcaaaacttagggggcggctttgt 76931  T
Q  436 agt 438  Q
    |||    
T  76930 agt 76928  T

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Target: scaffold0025 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 360 - 438
Target Start/End: Original strand, 19199 - 19277
Alignment:
Q  360 gtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    |||| |||| ||| || |||||||||  ||||||| |||||||||||||| || |||||||||||| ||||||||||||    
T  19199 gtcagcgtagaccgagccaaaattggccttgggggccaaaactaccacatgtgcaaaacttagggggcggttttgtagt 19277  T

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Target: scaffold0025; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 450 - 500
Target Start/End: Original strand, 19602 - 19652
Alignment:
Q  450 ggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaa 500  Q
    |||||||||||| ||||||||  |||||||| |||||||||||||||||||    
T  19602 ggggccaaaatcgcaactttgaaaaagttaggggactaaaactgctattaa 19652  T

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Target: scaffold0041 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 394 - 438
Target Start/End: Complemental strand, 93931 - 93887
Alignment:
Q  394 gtcaaaactaccacatatgtaaaacttaggggacggttttgtagt 438  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||    
T  93931 gtcaaaactgccacatatgcaaaacttaggggacggttttgtagt 93887  T

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Target: scaffold0578 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 334 - 433
Target Start/End: Complemental strand, 3245 - 3146
Alignment:
Q  334 atgtgacatctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacatatgtaaaacttaggggacggtttt 433  Q
    ||||| ||||||| |||| ||||||||||| |||| ||| |||||||||||   ||| ||| ||||| | ||||| ||| ||||||||| ||||||||||    
T  3245 atgtggcatctcacttagggtgccacgtcagcgtagaccgagtcaaaattgaccttgagggccaaaattgccacaaatgcaaaacttagaggacggtttt 3146  T

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Target: scaffold0809 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 455 - 509
Target Start/End: Original strand, 3023 - 3077
Alignment:
Q  455 caaaatcacaactttgggaaagttagaggactaaaactgctattaagcctatttt 509  Q
    ||||||| |||||||| ||||||||| | ||||||||||||||||| ||||||||    
T  3023 caaaatcgcaactttgagaaagttagggaactaaaactgctattaatcctatttt 3077  T

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Target: scaffold0417 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 336 - 409
Target Start/End: Complemental strand, 9505 - 9432
Alignment:
Q  336 gtgacatctcaattagagtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaactaccacat 409  Q
    |||||| |||| ||||  |||||||||| |||| ||| ||||||||||| | ||||||| ||||||||||||||    
T  9505 gtgacacctcacttaggatgccacgtcagcgtagaccgagtcaaaattgatcttgggggccaaaactaccacat 9432  T

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Target: scaffold0047 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Original strand, 63226 - 63275
Alignment:
Q  353 gtgccacgtcaacgtaaaccaagtcaaaattggtattgggggtcaaaact 402  Q
    |||||||||||||| | ||||||||||||||||| || ||||||||||||    
T  63226 gtgccacgtcaacgaagaccaagtcaaaattggtcttcggggtcaaaact 63275  T

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Target: scaffold0150 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 450 - 500
Target Start/End: Complemental strand, 9608 - 9558
Alignment:
Q  450 ggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaa 500  Q
    |||||||||||||||||||||| |||||||  || |||||||| |||||||    
T  9608 ggggccaaaatcacaactttggaaaagttaaggggctaaaactactattaa 9558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 452 - 509
Target Start/End: Complemental strand, 3623 - 3566
Alignment:
Q  452 ggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagcctatttt 509  Q
    ||||||||||  ||||||| |||||||||| | | |||||||||||||||| ||||||    
T  3623 ggccaaaatcgtaactttgtgaaagttagaaggcgaaaactgctattaagcttatttt 3566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0735 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0735
Description:

Target: scaffold0735; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 450 - 502
Target Start/End: Complemental strand, 6113 - 6061
Alignment:
Q  450 ggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagc 502  Q
    |||| |||||||||||||| | |||||||||||| | |||||| |||||||||    
T  6113 ggggtcaaaatcacaacttcgtgaaagttagagggcaaaaactactattaagc 6061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 456 - 504
Target Start/End: Complemental strand, 171 - 123
Alignment:
Q  456 aaaatcacaactttgggaaagttagaggactaaaactgctattaagcct 504  Q
    |||||| |||||||| |||||||||  | ||||||||||||||||||||    
T  171 aaaatcgcaactttgagaaagttaggaggctaaaactgctattaagcct 123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 449 - 505
Target Start/End: Original strand, 17935 - 17991
Alignment:
Q  449 aggggccaaaatcacaactttgggaaagttagaggactaaaactgctattaagccta 505  Q
    ||||||||||||| |||||||  || | ||||||||  |||||||||||||||||||    
T  17935 aggggccaaaatcgcaactttatgatacttagaggatcaaaactgctattaagccta 17991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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