View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7359_high_13 (Length: 360)
Name: NF7359_high_13
Description: NF7359
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7359_high_13 |
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Alignment Details
Target: chr7 (Bit Score: 309; Significance: 1e-174; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 2 - 345
Target Start/End: Complemental strand, 46518054 - 46517713
Alignment:
| Q |
2 |
aaatcaagattaaaattgggtgaacagagtccctacttgatgtcaacagattctattacaaatttgttaacaatactaaatttataccttaattttttat |
101 |
Q |
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| T |
46518054 |
aaatcaagattaaaattgggtgaa--gagtccctacttgatgtcaacagattctattacaaatttgttaacaatactaaatttataccttaattttttat |
46517957 |
T |
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| Q |
102 |
ttgattctccaatgtttatatatcttcactgtaattctccaacgtttatatatcactacttttgatctatgtttacaaaattgttttagatgccatggtt |
201 |
Q |
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| T |
46517956 |
tttattctccaatgtttatatatcttcactgtaattctttaacgtttatatatcactacttttgatctatgtttacaaaattgttttaggtgccatggtt |
46517857 |
T |
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| Q |
202 |
atcatataaaatgcgttttgctcttttgatttaccttaaatcatcaaatttaaattttttcaaacaattcgttatttgttcgaactcattataattattt |
301 |
Q |
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| T |
46517856 |
atcatataaaattcgttttgctattttgatttaccttaaatcatcaaatttaaattttttcaaacaattcgttatttgttcgaactcattataattattt |
46517757 |
T |
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| Q |
302 |
cggttcaattacttagttgtgtagaaagaaacatttttcttttt |
345 |
Q |
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| T |
46517756 |
cggttcaattacttagttgtgtagaaagaaacatttttcttttt |
46517713 |
T |
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