View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7359_low_15 (Length: 338)
Name: NF7359_low_15
Description: NF7359
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7359_low_15 |
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Alignment Details
Target: chr8 (Bit Score: 288; Significance: 1e-161; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 8 - 320
Target Start/End: Complemental strand, 3422407 - 3422091
Alignment:
| Q |
8 |
aattttagtaaactccaaacattttatttgactacgtttatacccttcttctagcttcatatccaaaacttgttaataaataaataaacaatattaacat |
107 |
Q |
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| T |
3422407 |
aattttagtaaactccaaacattttatttgactacgtatatacccttcttctagcttcatatccaaaacttgttaataaataaacaaacaatattaacat |
3422308 |
T |
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| Q |
108 |
tcaacaatcctcatccaaacagcatattcctgttaaaacattcatcaatctatcatcaaacttatccttatctaacattaactaattaattcatacaatt |
207 |
Q |
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| T |
3422307 |
tcaacaatcctcatccaaacagcatattcctgttaaaacattcatcaatctatcatcaaacttatccttatctaacattaactaattaattcatacaatt |
3422208 |
T |
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| Q |
208 |
atcaacaagcaaaccaaattcttttgacttgggccctccaaaaaataatgatccacaatgtaacattcaccca----taaacgaccttccatgatcacta |
303 |
Q |
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| T |
3422207 |
atcaacaagcaaaccaaattcttttgacttgggccctccaaaaaataattatccacaatgtaacattcacccataattaaacgaccttccatgatcacta |
3422108 |
T |
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| Q |
304 |
aacggcaacctctatcc |
320 |
Q |
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||||||||||||||||| |
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| T |
3422107 |
aacggcaacctctatcc |
3422091 |
T |
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