View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7360_low_1 (Length: 387)
Name: NF7360_low_1
Description: NF7360
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7360_low_1 |
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Alignment Details
Target: chr4 (Bit Score: 343; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 1 - 375
Target Start/End: Original strand, 32164505 - 32164879
Alignment:
| Q |
1 |
ctacacatgtcaatgtggcagtttgatcatatctacttttttcatgatcgtgtgtgatcataaagaaaaattaccttcttaacaagcagctggactggtt |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32164505 |
ctacacatgtcaatgtggcagtttgatcatatctactttgctcatgatcgtgtgtgatcataaagaaaaattaccttcttaacaagcagctggactggtt |
32164604 |
T |
|
| Q |
101 |
ttataatcaccctaccgcagatgtgcatgttctgaaattgagtcttgtaaagctggagataaccgttcaggcataagaatcgaagagcttggcaggagct |
200 |
Q |
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||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| |
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| T |
32164605 |
ttataatcaccctaccggagatgtgcatgttctgaaaatgagtcttgtaaagctggagataaccgttcaggcataagattcgaagagcttggcagaagct |
32164704 |
T |
|
| Q |
201 |
gatgggtccgaggaggtaaagtgaccaaaagatcagcagagttagtaaatggccttgtggtagaagcaagattgtctagctcgagagtcaataataactc |
300 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
32164705 |
gatgggttcgaggaggtaaagtgaccaaaagatcagcagagttagtaaatggccttgtagtagaagcaagattgtctagctcgagagtcaataataactc |
32164804 |
T |
|
| Q |
301 |
attgagctttcatatactcgacttgaagacttgactctaagagtttacttaatataaagaaacgtattaatgatg |
375 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32164805 |
attgagctttcatatactcgacttgaagacttgactctaagagtttacttaatataaagaaacgtattaatgatg |
32164879 |
T |
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