View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7360_low_3 (Length: 339)

Name: NF7360_low_3
Description: NF7360
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7360_low_3
NF7360_low_3
[»] chr2 (1 HSPs)
chr2 (292-324)||(18156394-18156426)


Alignment Details
Target: chr2 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 18156426 - 18156394
Alignment:
292 ttacttcatagttcatagatctccttcaaccag 324  Q
    |||||||||||||||||||||||||||||||||    
18156426 ttacttcatagttcatagatctccttcaaccag 18156394  T

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