View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7361_low_6 (Length: 246)
Name: NF7361_low_6
Description: NF7361
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7361_low_6 |
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Alignment Details
Target: chr6 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 18270167 - 18269935
Alignment:
| Q |
1 |
cctatgccgtctaaataaaggggatagggcttcagtcctattgttaaacaagataacaagggaaagctaaattaagacagactaaccttgctgcatagct |
100 |
Q |
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| T |
18270167 |
cctatgccgtctaaataaaggggatagggcttcagtcctattgttaaacaagataacaagggaaagctaaattaagacagactaaccttgctgcatagct |
18270068 |
T |
|
| Q |
101 |
ctgttgcagttttcttattctccacttcctcaactacttttatcgcttctagccaccatgattcactgtagttgtcttcaacagtgtcttcatattgcag |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
18270067 |
ctgttgcagttttcttattctccacttcctcaactacttttatcgcttctagccaccatgaatcactgtagttgtcttcaacagtgtcttcatattgcag |
18269968 |
T |
|
| Q |
201 |
aaaattgggcttgttatcattaggttgatgtcc |
233 |
Q |
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||||||||||||||||||||| ||||||||||| |
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| T |
18269967 |
aaaattgggcttgttatcattcggttgatgtcc |
18269935 |
T |
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