View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7363_high_8 (Length: 346)
Name: NF7363_high_8
Description: NF7363
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7363_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 16 - 330
Target Start/End: Original strand, 32015668 - 32015984
Alignment:
| Q |
16 |
ctttgttgtgttatcaagaaaatattggaggcaatatacatttatttgcttggtacaattttctacaaatgttcgacgttgtcgatggtgaatttaccac |
115 |
Q |
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| T |
32015668 |
ctttgttgtgttatcaagaaaatattggaggcaatatacatttatttgcttggtacaattttctacaaatgttcgacgttgtcgatggtgaatttaccac |
32015767 |
T |
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| Q |
116 |
ataaagaatgaaaattgaattagatcacacactcaaaaatagctccgatttctggtttttggttgaaacaaagcttaccctattttgaagtttattataa |
215 |
Q |
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| T |
32015768 |
ataaagaatgaaaattgaattagatcacaaactcaaaaatagctccgatttctggtttttggttgaaacaaagcttaccctattttgaagtttattataa |
32015867 |
T |
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| Q |
216 |
tgtctaatatagaagaaaggaaaacatcttcatgttttttatttgtatgccgaaaagcagctttgaactttgatgtctgttttccctaatacaaggcatc |
315 |
Q |
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|||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| | |
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| T |
32015868 |
tgtctaatatagaagaaagggaaacatcttcatgttttttatttgtatgccaaaaagcagctttgaactttgacgtctgttttccctaatacaaggcagc |
32015967 |
T |
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| Q |
316 |
--atgaaacactattga |
330 |
Q |
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||||||||||||||| |
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| T |
32015968 |
atatgaaacactattga |
32015984 |
T |
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