View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7363_low_15 (Length: 260)

Name: NF7363_low_15
Description: NF7363
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7363_low_15
NF7363_low_15
[»] chr3 (21 HSPs)
chr3 (13-252)||(12033398-12033636)
chr3 (15-252)||(14865711-14865948)
chr3 (13-252)||(17131595-17131834)
chr3 (15-252)||(19235023-19235257)
chr3 (150-252)||(23370458-23370560)
chr3 (73-252)||(13302195-13302372)
chr3 (133-220)||(51301572-51301659)
chr3 (73-252)||(13312851-13313028)
chr3 (73-252)||(13323742-13323920)
chr3 (146-220)||(10389428-10389502)
chr3 (146-220)||(10414517-10414591)
chr3 (146-220)||(10421187-10421261)
chr3 (66-204)||(17240513-17240652)
chr3 (153-210)||(24933823-24933880)
chr3 (150-204)||(9534328-9534382)
chr3 (150-204)||(18929246-18929300)
chr3 (150-202)||(20247791-20247843)
chr3 (150-202)||(24192957-24193009)
chr3 (153-205)||(41455097-41455149)
chr3 (150-205)||(16801467-16801521)
chr3 (150-204)||(14762758-14762812)
[»] scaffold0053 (1 HSPs)
scaffold0053 (15-252)||(79442-79680)
[»] chr1 (10 HSPs)
chr1 (14-252)||(20851085-20851323)
chr1 (14-252)||(20857712-20857950)
chr1 (14-252)||(21706140-21706378)
chr1 (13-252)||(21710682-21710920)
chr1 (152-246)||(20044910-20045004)
chr1 (131-204)||(18712780-18712854)
chr1 (150-204)||(20437024-20437078)
chr1 (150-204)||(32651573-32651627)
chr1 (153-205)||(41112038-41112090)
chr1 (150-204)||(19663517-19663571)
[»] chr8 (8 HSPs)
chr8 (14-252)||(24320623-24320861)
chr8 (27-204)||(29643386-29643564)
chr8 (150-220)||(44477623-44477693)
chr8 (150-220)||(44492781-44492851)
chr8 (119-204)||(18614240-18614327)
chr8 (66-204)||(23482053-23482192)
chr8 (150-202)||(8727735-8727787)
chr8 (153-205)||(23866618-23866670)
[»] chr7 (26 HSPs)
chr7 (13-252)||(20906414-20906652)
chr7 (15-252)||(16090940-16091178)
chr7 (15-252)||(29181061-29181299)
chr7 (105-252)||(2971209-2971356)
chr7 (13-111)||(2966828-2966926)
chr7 (146-252)||(14319582-14319688)
chr7 (33-216)||(2465246-2465427)
chr7 (33-213)||(3857357-3857536)
chr7 (146-248)||(14230777-14230879)
chr7 (152-220)||(31155396-31155464)
chr7 (150-252)||(14567204-14567306)
chr7 (150-204)||(11382871-11382925)
chr7 (150-204)||(11389348-11389402)
chr7 (150-212)||(21230952-21231014)
chr7 (150-205)||(14422985-14423040)
chr7 (150-204)||(16009577-16009631)
chr7 (153-205)||(12590643-12590695)
chr7 (153-205)||(13007435-13007487)
chr7 (150-206)||(20311050-20311106)
chr7 (150-204)||(13679494-13679548)
chr7 (150-204)||(15168176-15168230)
chr7 (153-205)||(12709843-12709895)
chr7 (153-205)||(13122914-13122966)
chr7 (153-205)||(13743712-13743764)
chr7 (150-202)||(16677296-16677348)
chr7 (150-202)||(17651532-17651584)
[»] chr2 (14 HSPs)
chr2 (13-252)||(25180882-25181121)
chr2 (14-253)||(10441-10680)
chr2 (146-252)||(27207672-27207778)
chr2 (146-252)||(26885179-26885284)
chr2 (27-252)||(23168252-23168480)
chr2 (27-252)||(23579509-23579737)
chr2 (66-204)||(23265058-23265197)
chr2 (66-204)||(23280126-23280265)
chr2 (153-220)||(5706008-5706075)
chr2 (150-204)||(6483718-6483772)
chr2 (150-204)||(6487185-6487239)
chr2 (150-204)||(21908360-21908414)
chr2 (153-205)||(26583830-26583882)
chr2 (187-220)||(27366533-27366566)
[»] chr4 (7 HSPs)
chr4 (15-243)||(16146791-16147020)
chr4 (27-212)||(27906142-27906328)
chr4 (91-202)||(14486601-14486713)
chr4 (153-220)||(53483708-53483775)
chr4 (150-206)||(15408140-15408196)
chr4 (150-205)||(11848114-11848169)
chr4 (153-205)||(8045832-8045884)
[»] chr5 (21 HSPs)
chr5 (14-252)||(19236765-19237002)
chr5 (14-252)||(22461020-22461258)
chr5 (14-252)||(22467644-22467882)
chr5 (13-252)||(20772834-20773069)
chr5 (13-252)||(20781609-20781844)
chr5 (27-252)||(24929883-24930105)
chr5 (27-252)||(28909243-28909466)
chr5 (27-252)||(28945638-28945861)
chr5 (27-252)||(28895995-28896218)
chr5 (27-252)||(28924821-28925044)
chr5 (36-213)||(20820105-20820279)
chr5 (36-213)||(20827205-20827379)
chr5 (27-252)||(28889291-28889514)
chr5 (27-212)||(34829962-34830146)
chr5 (66-204)||(18407944-18408083)
chr5 (66-204)||(23111200-23111339)
chr5 (150-206)||(22438746-22438802)
chr5 (150-205)||(38144536-38144591)
chr5 (150-204)||(19512387-19512441)
chr5 (150-204)||(28370055-28370109)
chr5 (153-205)||(23528634-23528686)
[»] scaffold0072 (1 HSPs)
scaffold0072 (15-252)||(49922-50161)
[»] chr6 (25 HSPs)
chr6 (14-252)||(20007900-20008138)
chr6 (15-252)||(9099026-9099260)
chr6 (33-252)||(21364436-21364650)
chr6 (33-252)||(23968418-23968632)
chr6 (152-252)||(11288623-11288721)
chr6 (27-252)||(31252300-31252526)
chr6 (152-220)||(15458492-15458560)
chr6 (152-220)||(15465087-15465155)
chr6 (150-212)||(10986173-10986235)
chr6 (150-220)||(34639971-34640041)
chr6 (150-220)||(34646645-34646715)
chr6 (177-244)||(28288472-28288537)
chr6 (150-205)||(29614146-29614201)
chr6 (150-204)||(4477858-4477912)
chr6 (150-204)||(23839199-23839253)
chr6 (150-212)||(24512836-24512898)
chr6 (153-205)||(12168366-12168418)
chr6 (153-205)||(19287275-19287327)
chr6 (153-205)||(19785869-19785921)
chr6 (153-205)||(19878459-19878511)
chr6 (150-205)||(930095-930150)
chr6 (150-205)||(18800438-18800493)
chr6 (187-220)||(24563475-24563508)
chr6 (152-204)||(9187498-9187550)
chr6 (153-205)||(19884235-19884287)
[»] scaffold0023 (1 HSPs)
scaffold0023 (15-252)||(135304-135540)
[»] scaffold1318 (1 HSPs)
scaffold1318 (66-252)||(1865-2051)
[»] scaffold0348 (1 HSPs)
scaffold0348 (15-248)||(9201-9434)
[»] scaffold0131 (1 HSPs)
scaffold0131 (40-252)||(889-1098)
[»] scaffold1469 (1 HSPs)
scaffold1469 (27-220)||(1234-1425)
[»] scaffold0384 (1 HSPs)
scaffold0384 (34-246)||(16023-16233)
[»] scaffold0127 (1 HSPs)
scaffold0127 (66-252)||(10156-10341)
[»] scaffold0001 (1 HSPs)
scaffold0001 (71-252)||(492981-493162)
[»] scaffold0029 (3 HSPs)
scaffold0029 (33-216)||(91191-91374)
scaffold0029 (33-216)||(96917-97100)
scaffold0029 (152-205)||(111885-111938)
[»] scaffold0553 (2 HSPs)
scaffold0553 (150-252)||(10148-10250)
scaffold0553 (177-246)||(11042-11111)
[»] scaffold0544 (1 HSPs)
scaffold0544 (150-252)||(1478-1580)
[»] scaffold0609 (1 HSPs)
scaffold0609 (27-220)||(5842-6035)
[»] scaffold0720 (1 HSPs)
scaffold0720 (146-248)||(3359-3461)
[»] scaffold0261 (1 HSPs)
scaffold0261 (27-212)||(23562-23748)
[»] scaffold0249 (1 HSPs)
scaffold0249 (152-220)||(13879-13947)
[»] scaffold0183 (1 HSPs)
scaffold0183 (152-252)||(6-104)
[»] scaffold0107 (1 HSPs)
scaffold0107 (13-212)||(40524-40725)
[»] scaffold0034 (1 HSPs)
scaffold0034 (27-234)||(73161-73365)
[»] scaffold0026 (2 HSPs)
scaffold0026 (150-220)||(111686-111756)
scaffold0026 (150-205)||(11850-11905)
[»] scaffold0453 (1 HSPs)
scaffold0453 (146-209)||(10546-10609)
[»] scaffold0222 (1 HSPs)
scaffold0222 (66-204)||(16736-16875)
[»] scaffold0019 (1 HSPs)
scaffold0019 (27-206)||(135349-135530)
[»] scaffold2054 (1 HSPs)
scaffold2054 (152-205)||(717-770)
[»] scaffold0099 (1 HSPs)
scaffold0099 (27-203)||(12833-13019)
[»] scaffold0146 (1 HSPs)
scaffold0146 (66-204)||(13548-13687)
[»] scaffold0004 (1 HSPs)
scaffold0004 (131-204)||(116877-116951)
[»] scaffold0924 (1 HSPs)
scaffold0924 (150-205)||(750-805)
[»] scaffold0461 (1 HSPs)
scaffold0461 (66-204)||(8-147)
[»] scaffold0247 (1 HSPs)
scaffold0247 (150-205)||(11342-11397)
[»] scaffold0154 (1 HSPs)
scaffold0154 (150-205)||(30858-30913)
[»] scaffold0129 (1 HSPs)
scaffold0129 (153-220)||(45259-45326)
[»] scaffold0020 (1 HSPs)
scaffold0020 (131-204)||(101928-102002)
[»] scaffold0235 (1 HSPs)
scaffold0235 (151-212)||(22585-22646)
[»] scaffold0310 (1 HSPs)
scaffold0310 (150-206)||(17644-17700)
[»] scaffold0025 (1 HSPs)
scaffold0025 (150-202)||(14398-14450)
[»] scaffold0456 (2 HSPs)
scaffold0456 (150-205)||(932-987)
scaffold0456 (150-205)||(8077-8132)
[»] scaffold0090 (1 HSPs)
scaffold0090 (150-205)||(18170-18225)
[»] scaffold1461 (1 HSPs)
scaffold1461 (146-204)||(1485-1543)
[»] scaffold0317 (1 HSPs)
scaffold0317 (150-204)||(1387-1441)
[»] scaffold0124 (1 HSPs)
scaffold0124 (150-204)||(34276-34330)
[»] scaffold1773 (1 HSPs)
scaffold1773 (153-214)||(1181-1242)
[»] scaffold0796 (2 HSPs)
scaffold0796 (153-246)||(1691-1784)
scaffold0796 (153-246)||(5714-5807)
[»] scaffold0117 (2 HSPs)
scaffold0117 (152-205)||(1897-1950)
scaffold0117 (152-205)||(8574-8627)
[»] scaffold0058 (1 HSPs)
scaffold0058 (153-205)||(294-346)
[»] scaffold0006 (1 HSPs)
scaffold0006 (153-205)||(50182-50234)


Alignment Details
Target: chr3 (Bit Score: 212; Significance: 1e-116; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 13 - 252
Target Start/End: Complemental strand, 12033636 - 12033398
Alignment:
Q  13 acatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaaccctta 112  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  12033636 acatcaacaacatagattaagaaatcatactaaacatcaaagtacaacattataaacctgattcttataccttttctttcaaaatcatcattaaccctta 12033537  T
Q  113 ttttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 212  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12033536 atttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 12033437  T
Q  213 aagacaaatagcacagcaaatcagttcctaagttcttctc 252  Q
    |||||||| |||||| ||||||||||||||||||||||||    
T  12033436 aagacaaa-agcacatcaaatcagttcctaagttcttctc 12033398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 15 - 252
Target Start/End: Original strand, 14865711 - 14865948
Alignment:
Q  15 atcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttatt 114  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||| |||||    
T  14865711 atcaacaacatggattaagaaatcatactaatcatccaagtacaacattataaacctgcttcttacaccttttctttcaaaatcatcattaaccattatt 14865810  T
Q  115 ttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaa 214  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  14865811 ttcccaattttaccttaagaacagtttaattgattaattttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaa 14865910  T
Q  215 gacaaatagcacagcaaatcagttcctaagttcttctc 252  Q
    ||||||||||||||||||||||||||||||||||||||    
T  14865911 gacaaatagcacagcaaatcagttcctaagttcttctc 14865948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 13 - 252
Target Start/End: Original strand, 17131595 - 17131834
Alignment:
Q  13 acatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaaccctta 112  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||| |    
T  17131595 acatcaacaacatagattaagaaatcatactaaacatcaaagtacaacattataaacctgatccttataccttttctttcaaaatcatccttaaccctaa 17131694  T
Q  113 ttttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 212  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17131695 atttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 17131794  T
Q  213 aagacaaatagcacagcaaatcagttcctaagttcttctc 252  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  17131795 aagacaaaaagcacagcaaatcagttcctaagttcttctc 17131834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 15 - 252
Target Start/End: Complemental strand, 19235257 - 19235023
Alignment:
Q  15 atcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttatt 114  Q
    |||||||| || ||||| ||||||||||||||||||||| |||||||||| |||||||||||||| || ||||||| || |||||||||||||||| | |    
T  19235257 atcaacaatatagattaggaaatcatactaatcatcaaa-tacaacattataaacctgattcttacacattttctt-cagaatcatcattaaccctaaat 19235160  T
Q  115 ttcccaattttaccttaagaacagttcaattgattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 213  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  19235159 ttcccaattttaccttaagaacagttaaattgattaatttttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattgcaa 19235060  T
Q  214 agacaaatagcacagcaaatcagttcctaagttcttctc 252  Q
    ||| ||  ||  |||||||||| |||||||| |||||||    
T  19235059 agataa--agtgcagcaaatcaattcctaagctcttctc 19235023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 150 - 252
Target Start/End: Complemental strand, 23370560 - 23370458
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaatcagttcctaagttctt 249  Q
    ||||||||||||||||| ||||||| |||||| ||||| |||||||||||||||||||||| | ||||||| ||||||||||||| ||||||||||||||    
T  23370560 aattttcagaaattatagattatgattattgagagatagtcccacccttaccttagaattgtatagacaaaaagcacagcaaatccgttcctaagttctt 23370461  T
Q  250 ctc 252  Q
    |||    
T  23370460 ctc 23370458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 73 - 252
Target Start/End: Complemental strand, 13302372 - 13302195
Alignment:
Q  73 attcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt-aagaacagttcaattgattaattttcagaaattatatatta 171  Q
    ||||||| ||| || ||||| || ||||||| |||||| | || |||| ||||| ||| ||||||| | || ||||||||||||||||||||| ||||||    
T  13302372 attcttacaccattcctttcgaagtcatcatcaaccctaaattcccca-ttttatcttcaagaacaatgcatttgattaattttcagaaattacatatta 13302274  T
Q  172 tgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaatcagttcctaagttcttctc 252  Q
    ||| ||||||||||||||| |||||||||||||||||||   ||| ||| | ||||||||||||||||||| |||| ||||    
T  13302273 tgattattgaaagataatctcacccttaccttagaattg--tagaaaaaaaacacagcaaatcagttcctaggttcatctc 13302195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 133 - 220
Target Start/End: Original strand, 51301572 - 51301659
Alignment:
Q  133 gaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 220  Q
    ||||| |||||||||||||||||||||||||| ||||||||| ||||| ||||||||| |||||||||||||||||||| ||||||||    
T  51301572 gaacaattcaattgattaattttcagaaattacatattatgattattggaagataatctcacccttaccttagaattgcgaagacaaa 51301659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 73 - 252
Target Start/End: Complemental strand, 13313028 - 13312851
Alignment:
Q  73 attcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt-aagaacagttcaattgattaattttcagaaattatatatta 171  Q
    ||||||| ||| || ||||| || ||||||| |||||| | || ||| |||||| ||| ||||||| | || |||||||||||||| |||||| ||||||    
T  13313028 attcttacaccattcctttcgaagtcatcatcaaccctaaatt-ccctattttatcttcaagaacaatccatttgattaattttcaaaaattacatatta 13312930  T
Q  172 tgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaatcagttcctaagttcttctc 252  Q
    ||| ||||||||||||||| |||||||||||||||||||   ||| ||| | ||||||||||||||||||| |||| ||||    
T  13312929 tgattattgaaagataatctcacccttaccttagaattg--tagaaaaaaaacacagcaaatcagttcctaggttcatctc 13312851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 73 - 252
Target Start/End: Complemental strand, 13323920 - 13323742
Alignment:
Q  73 attcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt-aagaacagttcaatt-gattaattttcagaaattatatatt 170  Q
    ||||||| ||| || ||||| || ||||||| |||||| | || |||||||||| ||| ||||||| |  |||| ||||||||||||||||||| |||||    
T  13323920 attcttacaccattcctttcgaagtcatcatcaaccctaaatt-cccaattttatcttcaagaacaatctaatttgattaattttcagaaattacatatt 13323822  T
Q  171 atgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaatcagttcctaagttcttctc 252  Q
    |||| ||||||||||||||| |||||||||||||||||||   ||| ||| |   ||||||||||||||||| |||||||||    
T  13323821 atgattattgaaagataatctcacccttaccttagaattg--tagaaaaaaaaatcagcaaatcagttcctaggttcttctc 13323742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 146 - 220
Target Start/End: Complemental strand, 10389502 - 10389428
Alignment:
Q  146 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 220  Q
    ||||| ||||||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||||||||    
T  10389502 gattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaa 10389428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 146 - 220
Target Start/End: Complemental strand, 10414591 - 10414517
Alignment:
Q  146 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 220  Q
    ||||| ||||||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||||||||    
T  10414591 gattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaa 10414517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 146 - 220
Target Start/End: Complemental strand, 10421261 - 10421187
Alignment:
Q  146 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 220  Q
    ||||| ||||||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||||||||    
T  10421261 gattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaa 10421187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 204
Target Start/End: Complemental strand, 17240652 - 17240513
Alignment:
Q  66 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt--aagaacagttcaatt-gattaattttcagaaat 162  Q
    |||| ||||||||| ||| || |||||||||||| ||| |||||| |||  |||||||||   ||  ||||||| ||||||| ||| |||||||||||||    
T  17240652 aaacatgattcttacaccattcctttcaaaatcagcatcaaccctaatt--cccaatttttattttcaagaacaattcaattagatcaattttcagaaat 17240555  T
Q  163 tatatattatgactattgaaagataatcccacccttacctta 204  Q
    ||| ||||| || |||||| ||||| || |||||||||||||    
T  17240554 tatgtattaagattattgagagatagtctcacccttacctta 17240513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 210
Target Start/End: Complemental strand, 24933880 - 24933823
Alignment:
Q  153 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattg 210  Q
    |||||||||||||| ||||||| |||||| ||||| || |||||||||||||||||||    
T  24933880 tttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattg 24933823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 150 - 204
Target Start/End: Original strand, 9534328 - 9534382
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 204  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  9534328 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 9534382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 150 - 204
Target Start/End: Original strand, 18929246 - 18929300
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 204  Q
    |||||||||||||||||||| |||| |||||| ||||| || |||||||||||||    
T  18929246 aattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18929300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 202
Target Start/End: Complemental strand, 20247843 - 20247791
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 202  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||    
T  20247843 aattttcagaaattatagattatgattattgagagatagtctcacccttacct 20247791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 202
Target Start/End: Original strand, 24192957 - 24193009
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 202  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||    
T  24192957 aattttcagaaattatagattatgattattgagagatagtctcacccttacct 24193009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 41455149 - 41455097
Alignment:
Q  153 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 205  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  41455149 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 41455097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 205
Target Start/End: Complemental strand, 16801521 - 16801467
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 205  Q
    |||||||||||||||||||| |||| |||||| ||||| || ||||||||||||||    
T  16801521 aattttcagaaattatatat-atgattattgagagatagtctcacccttaccttag 16801467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 204
Target Start/End: Complemental strand, 14762812 - 14762758
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 204  Q
    ||||||||||||||||| ||||||| ||| || ||||| || |||||||||||||    
T  14762812 aattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 14762758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 15 - 252
Target Start/End: Complemental strand, 79680 - 79442
Alignment:
Q  15 atcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttatt 114  Q
    |||||||||||||||||||||||||||||||||||  || |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  79680 atcaacaacatggattaagaaatcatactaatcattcaaatacaacattataaacctgattcttacaccttttctttcaaaatcatcattaacccttatt 79581  T
Q  115 ttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaa 214  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  79580 ttcccaattttaccttaagaacagtttaattgattaattttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaa 79481  T
Q  215 gacaaatagcacagc-aaatcagttcctaagttcttctc 252  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  79480 gacaaatagcacagcaaaatcagttcctaagttcttctc 79442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 203; Significance: 1e-111; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 14 - 252
Target Start/End: Complemental strand, 20851323 - 20851085
Alignment:
Q  14 catcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttat 113  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||| || ||||||||| |||||||||||||||||||||||||| |||||||| |     
T  20851323 catcaacaacatagattaagaaatcatactaaacatcaaagtacaacaatataaacctgatccttataccttttctttcaaaatcatccttaaccctaaa 20851224  T
Q  114 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20851223 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 20851124  T
Q  214 agacaaatagcacagcaaatcagttcctaagttcttctc 252  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  20851123 agacaaaaagcacagcaaatcagttcctaagttcttctc 20851085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 14 - 252
Target Start/End: Complemental strand, 20857950 - 20857712
Alignment:
Q  14 catcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttat 113  Q
    |||||||||||| |||||||||| |||||||| ||||||||||||||| || ||||||||| |||||||||||||||||||||||||| |||||||| |     
T  20857950 catcaacaacatagattaagaaaacatactaaacatcaaagtacaacaatataaacctgatccttataccttttctttcaaaatcatccttaaccctaaa 20857851  T
Q  114 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20857850 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 20857751  T
Q  214 agacaaatagcacagcaaatcagttcctaagttcttctc 252  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  20857750 agacaaaaagcacagcaaatcagttcctaagttcttctc 20857712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 14 - 252
Target Start/End: Original strand, 21706140 - 21706378
Alignment:
Q  14 catcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttat 113  Q
    |||||||||||| |||||||||| |||||||| ||||||||||||||| || ||||||||| |||||||||||||||||||||||||| |||||||| |     
T  21706140 catcaacaacatagattaagaaaacatactaaacatcaaagtacaacaatataaacctgatccttataccttttctttcaaaatcatccttaaccctaaa 21706239  T
Q  114 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21706240 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 21706339  T
Q  214 agacaaatagcacagcaaatcagttcctaagttcttctc 252  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  21706340 agacaaaaagcacagcaaatcagttcctaagttcttctc 21706378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 13 - 252
Target Start/End: Original strand, 21710682 - 21710920
Alignment:
Q  13 acatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaaccctta 112  Q
    ||||||||||||| ||||||| ||||||||||| |||||| ||| ||||||| ||||||||| ||||||| |||||||||||||||||| | |||||| |    
T  21710682 acatcaacaacatagattaaggaatcatactaaacatcaa-gtataacattataaacctgatccttatactttttctttcaaaatcatcttaaaccctaa 21710780  T
Q  113 ttttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 212  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21710781 atttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 21710880  T
Q  213 aagacaaatagcacagcaaatcagttcctaagttcttctc 252  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  21710881 aagacaaaaagcacagcaaatcagttcctaagttcttctc 21710920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 246
Target Start/End: Complemental strand, 20045004 - 20044910
Alignment:
Q  152 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaatcagttcctaagtt 246  Q
    ||||||||| |||||||||| ||  |||||| ||||||||||||||||||||||||||| |   | || || ||||||||||||| |||||||||    
T  20045004 ttttcagaatttatatattaagatcattgaaggataatcccacccttaccttagaattgtaggaagaattaacacagcaaatcagctcctaagtt 20044910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 204
Target Start/End: Original strand, 18712780 - 18712854
Alignment:
Q  131 aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 204  Q
    ||||||| ||||||| ||| ||||||||||||||||||| ||||| |||||| ||||| || ||||| |||||||    
T  18712780 aagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccatacctta 18712854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 150 - 204
Target Start/End: Complemental strand, 20437078 - 20437024
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 204  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  20437078 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 20437024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 150 - 204
Target Start/End: Original strand, 32651573 - 32651627
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 204  Q
    ||||||||||||||||||| ||||| |||||| ||||| || |||||||||||||    
T  32651573 aattttcagaaattatatactatgattattgagagatagtctcacccttacctta 32651627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 41112038 - 41112090
Alignment:
Q  153 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 205  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  41112038 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 41112090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 204
Target Start/End: Complemental strand, 19663571 - 19663517
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 204  Q
    ||||||||||||||||||| ||||| ||| || ||||| || |||||||||||||    
T  19663571 aattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 19663517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 199; Significance: 1e-108; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 14 - 252
Target Start/End: Complemental strand, 24320861 - 24320623
Alignment:
Q  14 catcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttat 113  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||| || ||||||||| | |||||||||||||||||||||||| |||||||| |     
T  24320861 catcaacaacatagattaagaaatcatactaaacatcaaagtacaacaatataaacctgatccctataccttttctttcaaaatcatccttaaccctaaa 24320762  T
Q  114 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24320761 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 24320662  T
Q  214 agacaaatagcacagcaaatcagttcctaagttcttctc 252  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  24320661 agacaaaaagcacagcaaatcagttcctaagttcttctc 24320623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 204
Target Start/End: Complemental strand, 29643564 - 29643386
Alignment:
Q  27 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttta 126  Q
    ||||||||||||||||| | || |||| |||||||  |  ||||  ||||||| |||  | ||| | |||||||||| |||||||| || | ||||||||    
T  29643564 gattaagaaatcatactgaacaccaaattacaacacaattaacccaattcttacaccaatccttcctaaatcatcatcaacccttaatt-ctcaatttta 29643466  T
Q  127 ccttaa-gaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 204  Q
     ||| | ||||| ||||||| ||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||    
T  29643465 tcttcatgaacaattcaatttgattaattttcagaaattacatattatgattattgaaagataatctcacccttacctta 29643386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 220
Target Start/End: Original strand, 44477623 - 44477693
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 220  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||||||||  ||||||||    
T  44477623 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtgaagacaaa 44477693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 220
Target Start/End: Original strand, 44492781 - 44492851
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 220  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||||||||  ||||||||    
T  44492781 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtgaagacaaa 44492851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 204
Target Start/End: Original strand, 18614240 - 18614327
Alignment:
Q  119 caattttacctt-aagaacagttcaattg-attaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 204  Q
    |||||||| ||| ||||||| |||||||| || |||||||||||||||||||| |||| |||||| ||||| || |||||||||||||    
T  18614240 caattttatcttcaagaacaattcaattggatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18614327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 204
Target Start/End: Complemental strand, 23482192 - 23482053
Alignment:
Q  66 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt--aagaacagttcaatt-gattaattttcagaaat 162  Q
    |||| ||||||||| ||| |  |||||||||||| ||| |||||| |||  |||||||||   ||  ||||||| ||||||| ||| |||||||||||||    
T  23482192 aaacatgattcttacaccatccctttcaaaatcagcatcaaccctaatt--cccaatttttattttcaagaacaattcaattagatcaattttcagaaat 23482095  T
Q  163 tatatattatgactattgaaagataatcccacccttacctta 204  Q
    |||||| ||||| |||||| ||||| || |||||||||||||    
T  23482094 tatatactatgattattgagagatagtctcacccttacctta 23482053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 202
Target Start/End: Complemental strand, 8727787 - 8727735
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 202  Q
    ||||||||||||||||| ||||||| ||||||  ||||||| |||||||||||    
T  8727787 aattttcagaaattatagattatgattattgagggataatctcacccttacct 8727735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 23866618 - 23866670
Alignment:
Q  153 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 205  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  23866618 tttcaggaattataaattatgattattgagagatagtctcacccttaccttag 23866670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 196; Significance: 1e-107; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 13 - 252
Target Start/End: Complemental strand, 20906652 - 20906414
Alignment:
Q  13 acatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaaccctta 112  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  20906652 acatcaacaacatagattaagaaatcatactaaacatcaaagtacaacattataaacttgattcttataccttttctttcaaaatcatcattaaccctta 20906553  T
Q  113 ttttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 212  Q
     || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20906552 att-cccaattttaccttaagaatagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 20906454  T
Q  213 aagacaaatagcacagcaaatcagttcctaagttcttctc 252  Q
    | |||||||||| ||||||||| |||||||||||||||||    
T  20906453 aggacaaatagctcagcaaatccgttcctaagttcttctc 20906414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 15 - 252
Target Start/End: Original strand, 16090940 - 16091178
Alignment:
Q  15 atcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttatt 114  Q
    |||||||||||||||||||||||||||||||||||  || |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16090940 atcaacaacatggattaagaaatcatactaatcattcaaatacaacattataaacctgattcttacaccttttctttcaaaatcatcattaacccttatt 16091039  T
Q  115 ttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaa 214  Q
    ||||||||||||||||| |||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16091040 ttcccaattttaccttaggaacagtttaattgattaactttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaa 16091139  T
Q  215 gacaaatagcacagc-aaatcagttcctaagttcttctc 252  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  16091140 gacaaatagcacagcaaaatcagttcctaagttcttctc 16091178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 15 - 252
Target Start/End: Complemental strand, 29181299 - 29181061
Alignment:
Q  15 atcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttatt 114  Q
    |||||||||||||||||||||||||||||||||||  || |||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||    
T  29181299 atcaacaacatggattaagaaatcatactaatcattcaaatacaacattataagcctgattcttacaccttttctttcaaaatcatcattaacccttatt 29181200  T
Q  115 ttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaa 214  Q
    |||| |||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  29181199 ttccaaattttaccttaagaatagtttaattgattaattttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaa 29181100  T
Q  215 gacaaatagcacagc-aaatcagttcctaagttcttctc 252  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  29181099 gacaaatagcacagcaaaatcagttcctaagttcttctc 29181061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 105 - 252
Target Start/End: Original strand, 2971209 - 2971356
Alignment:
Q  105 aacccttattttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 204  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2971209 aacccttatcttcccaattttaccttaagaacagttcaattgattaattttcagaaattataaattatgactattgaaagataatcccacccttacctta 2971308  T
Q  205 gaattgcaaagacaaatagcacagcaaatcagttcctaagttcttctc 252  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  2971309 gaattgcaaagacaaaaagcacagcaaatcagttcctaagttcttctc 2971356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 13 - 111
Target Start/End: Original strand, 2966828 - 2966926
Alignment:
Q  13 acatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaaccctt 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  2966828 acatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaaacatcattaaccctt 2966926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 146 - 252
Target Start/End: Complemental strand, 14319688 - 14319582
Alignment:
Q  146 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaatcagttcctaagt 245  Q
    ||||||||||||||||||||| ||||  |  |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  14319688 gattaattttcagaaattatacattaaaatcattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatccgttcctaagt 14319589  T
Q  246 tcttctc 252  Q
    |||||||    
T  14319588 tcttctc 14319582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 33 - 216
Target Start/End: Original strand, 2465246 - 2465427
Alignment:
Q  33 gaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaa 132  Q
    ||||||||| ||||||||||| || ||||||| |||||| | ||||| || ||||||| ||||||   |||||||||| |||| || | ||||||| |||    
T  2465246 gaaatcatattaatcatcaaa-tataacattataaacctaaatcttacacattttctt-caaaattgccattaaccctaatttcccaatttttaccataa 2465343  T
Q  133 gaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaga 216  Q
     ||||||| ||||| ||||||||||||||| ||||||||| | ||||||| ||| |||||||||||||||||||||||||||||    
T  2465344 aaacagttaaattgcttaattttcagaaatcatatattatcattattgaaggatgatcccacccttaccttagaattgcaaaga 2465427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 3857536 - 3857357
Alignment:
Q  33 gaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttt---acct 129  Q
    ||||||||| ||||||||||| |||||||||| |||||| | ||||| || ||||||| ||||||   |||||||||| |||| |||||||||   |||     
T  3857536 gaaatcatattaatcatcaaa-tacaacattataaacctaaatcttacacattttctt-caaaattgccattaaccctaattt-cccaatttttttacca 3857440  T
Q  130 taagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 213  Q
    ||| ||||||| ||||| ||||||||||||||| ||||||||| | ||||| ||||| ||||||||||||||||||||||||||    
T  3857439 taaaaacagttaaattgcttaattttcagaaatcatatattatcattattg-aagatgatcccacccttaccttagaattgcaa 3857357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 146 - 248
Target Start/End: Original strand, 14230777 - 14230879
Alignment:
Q  146 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaatcagttcctaagt 245  Q
    ||||||||||||||||||||| ||||     |||||||||||||||||||||||||||||||||||||||||||| |||||  |||||| ||||||||||    
T  14230777 gattaattttcagaaattatacattaaattcattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacgacaaatccgttcctaagt 14230876  T
Q  246 tct 248  Q
    |||    
T  14230877 tct 14230879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 152 - 220
Target Start/End: Original strand, 31155396 - 31155464
Alignment:
Q  152 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 220  Q
    ||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||    
T  31155396 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaa 31155464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 150 - 252
Target Start/End: Original strand, 14567204 - 14567306
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaatcagttcctaagttctt 249  Q
    ||||||||||||  ||||||||| |  |||||| | ||  | ||||||||||||||||||| | ||||||| ||||||||||||| ||||||||||||||    
T  14567204 aattttcagaaaccatatattataatcattgaaggttagcctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 14567303  T
Q  250 ctc 252  Q
    |||    
T  14567304 ctc 14567306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 150 - 204
Target Start/End: Complemental strand, 11382925 - 11382871
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 204  Q
    ||||||||||||||||||||||||| |||||| ||||| || |||||||||||||    
T  11382925 aattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11382871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 150 - 204
Target Start/End: Complemental strand, 11389402 - 11389348
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 204  Q
    ||||||||||||||||||||||||| |||||| ||||| || |||||||||||||    
T  11389402 aattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11389348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 150 - 212
Target Start/End: Complemental strand, 21231014 - 21230952
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 212  Q
    ||||||||||||||||||| ||||| |||||| ||||| || ||||||||||||||| |||||    
T  21231014 aattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgca 21230952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 14422985 - 14423040
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 205  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  14422985 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 14423040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 150 - 204
Target Start/End: Original strand, 16009577 - 16009631
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 204  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  16009577 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 16009631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 12590695 - 12590643
Alignment:
Q  153 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 205  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  12590695 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 12590643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 13007435 - 13007487
Alignment:
Q  153 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 205  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  13007435 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 13007487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 20311106 - 20311050
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttaga 206  Q
    |||||||||||||||||  |||||| |||||| ||||| || |||||||||||||||    
T  20311106 aattttcagaaattatacgttatgattattgagagatagtctcacccttaccttaga 20311050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 204
Target Start/End: Original strand, 13679494 - 13679548
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 204  Q
    |||||||| ||||||||||| ||||  ||||||||||| || |||||||||||||    
T  13679494 aattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 13679548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 204
Target Start/End: Original strand, 15168176 - 15168230
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 204  Q
    ||||||||||||||||| ||||||| ||| || ||||| || |||||||||||||    
T  15168176 aattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 15168230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 12709895 - 12709843
Alignment:
Q  153 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 205  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  12709895 tttcaggaattataaattatgattattgagagatagtctcacccttaccttag 12709843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 13122966 - 13122914
Alignment:
Q  153 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 205  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  13122966 tttcaggaattataaattatgattattgagagatagtctcacccttaccttag 13122914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 13743712 - 13743764
Alignment:
Q  153 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 205  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  13743712 tttcaggaattataaattatgattattgagagatagtctcacccttaccttag 13743764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 202
Target Start/End: Original strand, 16677296 - 16677348
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 202  Q
    |||||| |||||||||| ||||||| |||||| ||||| || |||||||||||    
T  16677296 aatttttagaaattatagattatgattattgagagatagtctcacccttacct 16677348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 202
Target Start/End: Original strand, 17651532 - 17651584
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 202  Q
    |||||| |||||||||| ||||||| |||||| ||||| || |||||||||||    
T  17651532 aatttttagaaattatagattatgattattgagagatagtctcacccttacct 17651584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 192; Significance: 1e-104; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 13 - 252
Target Start/End: Complemental strand, 25181121 - 25180882
Alignment:
Q  13 acatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaaccctta 112  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||| | || |||||||||   |||||||||||||||||||||||| |||||||| |    
T  25181121 acatcaacaacatagattaagaaatcatactaaacatcaaagtacaaaaatataaacctgatcaatataccttttctttcaaaatcatccttaaccctaa 25181022  T
Q  113 ttttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 212  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25181021 atttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 25180922  T
Q  213 aagacaaatagcacagcaaatcagttcctaagttcttctc 252  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  25180921 aagacaaaaagcacagcaaatcagttcctaagttcttctc 25180882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 14 - 253
Target Start/End: Original strand, 10441 - 10680
Alignment:
Q  14 catcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttat 113  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||| || |||||| || | |||||||||||||||||||||||| |||||||| |     
T  10441 catcaacaacatagattaagaaatcatactaaacatcaaagtacaacaatataaaccttatccctataccttttctttcaaaatcatccttaaccctaaa 10540  T
Q  114 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 213  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  10541 tttcccaattttaccttaagaacaattcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaatttcaa 10640  T
Q  214 agacaaatagcacagcaaatcagttcctaagttcttctca 253  Q
    ||||||| |||||||||||||||||||||||| |||||||    
T  10641 agacaaaaagcacagcaaatcagttcctaagtccttctca 10680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 146 - 252
Target Start/End: Complemental strand, 27207778 - 27207672
Alignment:
Q  146 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaatcagttcctaagt 245  Q
    ||||||||||||||||||||| ||||  |  |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  27207778 gattaattttcagaaattatacattaaaatcattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatccgttcctaagt 27207679  T
Q  246 tcttctc 252  Q
    |||||||    
T  27207678 tcttctc 27207672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 146 - 252
Target Start/End: Original strand, 26885179 - 26885284
Alignment:
Q  146 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaatcagttcctaagt 245  Q
    ||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||| ||||||||||    
T  26885179 gattaattttcagaaattatacatta-gattattgaaagataatcccacccttaccttagaattgcagagacaaaaagcacatcaaatccgttcctaagt 26885277  T
Q  246 tcttctc 252  Q
    |||||||    
T  26885278 tcttctc 26885284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 27 - 252
Target Start/End: Complemental strand, 23168480 - 23168252
Alignment:
Q  27 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 125  Q
    ||||||||||||||||| | ||||||| |||||||    |||| ||| ||||| ||||||||||||||||||| ||| | ||||| ||| ||  ||||||    
T  23168480 gattaagaaatcatactgaacatcaaattacaacacattaaacatgactcttacaccttttctttcaaaatcagcatcataccctaattctc--aatttt 23168383  T
Q  126 ---accttaagaacagttcaatt-gattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 220  Q
       | ||| | |||  ||| ||| |||||||||| ||||||||||| |||||||  | |||||||||||||||||||||||||||||||||| | |||||    
T  23168382 tttatcttcaaaactattctattagattaatttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaaacaaa 23168283  T
Q  221 tagcacagcaaatcagttcctaagttcttctc 252  Q
     ||||||||||| | || ||||||||||||||    
T  23168282 -agcacagcaaaaccgtccctaagttcttctc 23168252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 27 - 252
Target Start/End: Complemental strand, 23579737 - 23579509
Alignment:
Q  27 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 125  Q
    ||||||||||||||||| | ||||||| |||||||    |||| ||| ||||| ||||||||||||||||||| ||| | ||||| ||| ||  ||||||    
T  23579737 gattaagaaatcatactgaacatcaaattacaacacattaaacatgactcttacaccttttctttcaaaatcagcatcataccctaattctc--aatttt 23579640  T
Q  126 ---accttaagaacagttcaatt-gattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 220  Q
       | ||| | |||  ||| ||| |||||||||| ||||||||||| |||||||  | |||||||||||||||||||||||||||||||||| | |||||    
T  23579639 tttatcttcaaaactattctattagattaatttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaaacaaa 23579540  T
Q  221 tagcacagcaaatcagttcctaagttcttctc 252  Q
     ||||||||||| | || ||||||||||||||    
T  23579539 -agcacagcaaaaccgtccctaagttcttctc 23579509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 204
Target Start/End: Original strand, 23265058 - 23265197
Alignment:
Q  66 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt-aagaacagttcaatt-gattaattttcagaaatt 163  Q
    |||| ||||||||| ||| || |||||||||||| ||| |||||| ||| ||  | |||||  || ||||||| ||||||| ||| ||||||||||||||    
T  23265058 aaacatgattcttacaccattcctttcaaaatcagcatcaaccctaattctca-atttttattttcaagaacaattcaattagatcaattttcagaaatt 23265156  T
Q  164 atatattatgactattgaaagataatcccacccttacctta 204  Q
    ||||| ||||| |||||| ||||| || |||||||||||||    
T  23265157 atatactatgattattgagagatagtctcacccttacctta 23265197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 204
Target Start/End: Original strand, 23280126 - 23280265
Alignment:
Q  66 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt-aagaacagttcaatt-gattaattttcagaaatt 163  Q
    |||| ||||||||| ||| || |||||||||||| ||| |||||| ||| ||  | |||||  || ||||||| ||||||| ||| ||||||||||||||    
T  23280126 aaacatgattcttacaccattcctttcaaaatcagcatcaaccctaattctca-atttttattttcaagaacaattcaattagatcaattttcagaaatt 23280224  T
Q  164 atatattatgactattgaaagataatcccacccttacctta 204  Q
    ||||| ||||| |||||| ||||| || |||||||||||||    
T  23280225 atatactatgattattgagagatagtctcacccttacctta 23280265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 220
Target Start/End: Complemental strand, 5706075 - 5706008
Alignment:
Q  153 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 220  Q
    |||||| ||||||| ||||||| || ||| ||||| || |||||||||||||||||||| ||||||||    
T  5706075 tttcaggaattatagattatgattaatgagagatagtctcacccttaccttagaattgcgaagacaaa 5706008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 150 - 204
Target Start/End: Original strand, 6483718 - 6483772
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 204  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  6483718 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 6483772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 150 - 204
Target Start/End: Original strand, 6487185 - 6487239
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 204  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  6487185 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 6487239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 150 - 204
Target Start/End: Original strand, 21908360 - 21908414
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 204  Q
    |||||||||||||||||||| |||| |||||| ||||| || |||||||||||||    
T  21908360 aattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 21908414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 26583830 - 26583882
Alignment:
Q  153 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 205  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  26583830 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 26583882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 220
Target Start/End: Complemental strand, 27366566 - 27366533
Alignment:
Q  187 aatcccacccttaccttagaattgcaaagacaaa 220  Q
    |||| |||||||||||||||||||||||||||||    
T  27366566 aatctcacccttaccttagaattgcaaagacaaa 27366533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 190; Significance: 1e-103; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 15 - 243
Target Start/End: Complemental strand, 16147020 - 16146791
Alignment:
Q  15 atcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttatt 114  Q
    |||||||||||||||||||||||||||||||||||  || |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16147020 atcaacaacatggattaagaaatcatactaatcattcaaatacaacattataaacctgattcttacaccttttctttcaaaatcatcattaacccttatt 16146921  T
Q  115 ttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaa 214  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16146920 ttccaaattttaccttaagaacagtttaattgattaattttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaa 16146821  T
Q  215 gacaaatagcacagc-aaatcagttcctaa 243  Q
    ||||||||||||||| ||||||||||||||    
T  16146820 gacaaatagcacagcaaaatcagttcctaa 16146791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 27 - 212
Target Start/End: Original strand, 27906142 - 27906328
Alignment:
Q  27 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 125  Q
    ||||||||||||||||  | ||||||| |||||||    |||| ||||||||| ||||||||||||||||||| ||| | ||||| ||| ||  ||||||    
T  27906142 gattaagaaatcatacggaacatcaaattacaacacattaaacatgattcttacaccttttctttcaaaatcaacatcacaccctaattctc--aatttt 27906239  T
Q  126 acctt-aagaacagttcaattg-attaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 212  Q
    | ||| ||||||  ||| |||  |||||||||||||||||||| |||||||  ||||||||||||||||||||||| ||||||||||||    
T  27906240 atcttcaagaactattctattatattaattttcagaaattatacattatgatcattgaaagataatcccacccttatcttagaattgca 27906328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 91 - 202
Target Start/End: Original strand, 14486601 - 14486713
Alignment:
Q  91 tcaaaatcatcattaacccttattttcccaattttacctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataa 188  Q
    ||||||||||||| |||||| || |||||||||||| ||| ||||||| ||||||| |||||||||||||||||||||||||||||  |||||| ||||     
T  14486601 tcaaaatcatcatcaaccct-atattcccaattttatcttcaagaacaattcaattcgattaattttcagaaattatatattatgatcattgaaggatag 14486699  T
Q  189 tcccacccttacct 202  Q
    || |||||||||||    
T  14486700 tctcacccttacct 14486713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 153 - 220
Target Start/End: Original strand, 53483708 - 53483775
Alignment:
Q  153 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 220  Q
    |||||| ||||||| ||||||| |||||| ||||| || |||||||||||||||||||| ||||||||    
T  53483708 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagaattgcgaagacaaa 53483775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 15408140 - 15408196
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttaga 206  Q
    ||||||||||||||||||| ||||| |||||| ||||| || |||||||||||||||    
T  15408140 aattttcagaaattatatactatgattattgagagatagtctcacccttaccttaga 15408196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 11848114 - 11848169
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 205  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  11848114 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 11848169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 8045884 - 8045832
Alignment:
Q  153 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 205  Q
    |||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  8045884 tttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 8045832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 187; Significance: 1e-101; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 14 - 252
Target Start/End: Original strand, 19236765 - 19237002
Alignment:
Q  14 catcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttat 113  Q
    |||||||||||| |||||||||  |||||||| | ||||||||||||| || ||||||||| |||||||||||||||||||||||||| |||||||| |     
T  19236765 catcaacaacatagattaagaacacatactaaac-tcaaagtacaacaatataaacctgatccttataccttttctttcaaaatcatccttaaccctaaa 19236863  T
Q  114 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19236864 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 19236963  T
Q  214 agacaaatagcacagcaaatcagttcctaagttcttctc 252  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  19236964 agacaaaaagcacagcaaatcagttcctaagttcttctc 19237002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 14 - 252
Target Start/End: Original strand, 22461020 - 22461258
Alignment:
Q  14 catcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttat 113  Q
    |||||||||||| || ||||||| |||||||| ||||||||||| ||| || ||||||||| |||||||||||||||||||| ||||| |||||||| |     
T  22461020 catcaacaacatagaataagaaaacatactaaacatcaaagtacgacaatataaacctgatccttataccttttctttcaaa-tcatccttaaccctaaa 22461118  T
Q  114 tttcccaattttaccttaagaacagttcaattgattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 212  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22461119 tttcccaattttaccttaagaacagttcaattgattaatttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 22461218  T
Q  213 aagacaaatagcacagcaaatcagttcctaagttcttctc 252  Q
    ||||||||  ||||||||||||||||| ||||||||||||    
T  22461219 aagacaaaaggcacagcaaatcagttcttaagttcttctc 22461258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 14 - 252
Target Start/End: Original strand, 22467644 - 22467882
Alignment:
Q  14 catcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttat 113  Q
    |||||||||||| || ||||||| |||||||| ||||||||||| ||| || ||||||||| |||||||||||||||||||| ||||| |||||||| |     
T  22467644 catcaacaacatagaataagaaaacatactaaacatcaaagtacgacaatataaacctgatccttataccttttctttcaaa-tcatccttaaccctaaa 22467742  T
Q  114 tttcccaattttaccttaagaacagttcaattgattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 212  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22467743 tttcccaattttaccttaagaacagttcaattgattaatttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 22467842  T
Q  213 aagacaaatagcacagcaaatcagttcctaagttcttctc 252  Q
    ||||||||  ||||||||||||||||| ||||||||||||    
T  22467843 aagacaaaaggcacagcaaatcagttcttaagttcttctc 22467882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 13 - 252
Target Start/End: Original strand, 20772834 - 20773069
Alignment:
Q  13 acatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaaccctta 112  Q
    |||||||||| || || || ||||||||||||||||||||| |||||||||| |||||||||||||| || ||||||| ||||||||||||||||||| |    
T  20772834 acatcaacaatatagagtaggaaatcatactaatcatcaaa-tacaacattataaacctgattcttacacattttctt-caaaatcatcattaaccctaa 20772931  T
Q  113 ttttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 212  Q
     ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  20772932 atttcccaattttaccttaagaacagttaaattgattaattttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattgca 20773031  T
Q  213 aagacaaatagcacagcaaatcagttcctaagttcttctc 252  Q
    |||| ||  || ||||||||||| |||||||| |||||||    
T  20773032 aagataa--agtacagcaaatcaattcctaagctcttctc 20773069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 13 - 252
Target Start/End: Original strand, 20781609 - 20781844
Alignment:
Q  13 acatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaaccctta 112  Q
    |||||||||| || || || ||||||||| ||||||||||| |||||||||| |||||||||||||| || ||||||| ||||||||||||||||||| |    
T  20781609 acatcaacaatatagagtaggaaatcataataatcatcaaa-tacaacattataaacctgattcttacacattttctt-caaaatcatcattaaccctaa 20781706  T
Q  113 ttttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 212  Q
     ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||    
T  20781707 atttcccaattttaccttaagaacagttaaattgattaattttcagaaatcatatattataattattgaaagataatcccacccttaccttagaattgca 20781806  T
Q  213 aagacaaatagcacagcaaatcagttcctaagttcttctc 252  Q
    |||| ||  || ||||||||||| |||||||| |||||||    
T  20781807 aagataa--agtacagcaaatcaattcctaagctcttctc 20781844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 27 - 252
Target Start/End: Complemental strand, 24930105 - 24929883
Alignment:
Q  27 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttta 126  Q
    ||||| ||||||||||||||||||||| |||||||||| |||||||||||||| || ||| ||| || |||||||||||||||| | |||||||||||||    
T  24930105 gattaggaaatcatactaatcatcaaa-tacaacattataaacctgattcttacacatttcctt-cagaatcatcattaaccctaaatttcccaatttta 24930008  T
Q  127 ccttaagaacagttcaattgattaa-ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagca 225  Q
    |||||||||||||| |||||||||| |||| |||||| ||||||||  ||||||||||||||||||||||||||||||||||||| ||||| ||  ||      
T  24930007 ccttaagaacagttaaattgattaattttttagaaatcatatattagaactattgaaagataatcccacccttaccttagaattgtaaagataa--agtg 24929910  T
Q  226 cagcaaatcagttcctaagttcttctc 252  Q
    |||||| ||| |||||||| |||||||    
T  24929909 cagcaagtcaattcctaagctcttctc 24929883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 27 - 252
Target Start/End: Complemental strand, 28909466 - 28909243
Alignment:
Q  27 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttt- 125  Q
    ||||| ||||||||||||||||| ||| |||||| | | |||||||| | |||  | ||||||| |||||||||||| || ||| ||||||||||||||     
T  28909466 gattaggaaatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaattttcccaattttt 28909369  T
Q  126 accttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagca 225  Q
    |||||||||||| || ||| | ||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||||||||||| |||||| ||||    
T  28909368 accttaagaacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacgacaaa-agca 28909270  T
Q  226 cagcaaatcagttcctaagttcttctc 252  Q
    |||||||||| |||||| |||||||||    
T  28909269 cagcaaatcaattcctaggttcttctc 28909243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 27 - 252
Target Start/End: Complemental strand, 28945861 - 28945638
Alignment:
Q  27 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttt- 125  Q
    ||||| ||||||||||||||||| ||| |||||| | | |||||||| | |||  | ||||||| |||||||||||| || ||| ||||||||||||||     
T  28945861 gattaggaaatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaattttcccaattttt 28945764  T
Q  126 accttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagca 225  Q
    |||||||||||| || ||| | ||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||||||||||| |||||| ||||    
T  28945763 accttaagaacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacgacaaa-agca 28945665  T
Q  226 cagcaaatcagttcctaagttcttctc 252  Q
    |||||||||| |||||| |||||||||    
T  28945664 cagcaaatcaattcctaggttcttctc 28945638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 27 - 252
Target Start/End: Complemental strand, 28896218 - 28895995
Alignment:
Q  27 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttt- 125  Q
    ||||| ||||||||||||||||| ||| |||||| | | |||||||| | |||  | ||||||| |||||||||||| || ||| ||||||||||||||     
T  28896218 gattaggaaatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaattttcccaattttt 28896121  T
Q  126 accttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagca 225  Q
    |||||||||||| || ||| | ||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||||||||||| | |||| ||||    
T  28896120 accttaagaacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacggcaaa-agca 28896022  T
Q  226 cagcaaatcagttcctaagttcttctc 252  Q
    |||||||||| |||||| |||||||||    
T  28896021 cagcaaatcaattcctaggttcttctc 28895995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 27 - 252
Target Start/End: Complemental strand, 28925044 - 28924821
Alignment:
Q  27 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttt- 125  Q
    ||||| ||||||||||||||||| ||| |||||| | | |||||||| | |||  | ||||||| |||||||||||| || ||| ||||||||||||||     
T  28925044 gattaggaaatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaattttcccaattttt 28924947  T
Q  126 accttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagca 225  Q
    |||||||||||| || ||| | ||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||||||||||| | |||| ||||    
T  28924946 accttaagaacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacggcaaa-agca 28924848  T
Q  226 cagcaaatcagttcctaagttcttctc 252  Q
    |||||||||| |||||| |||||||||    
T  28924847 cagcaaatcaattcctaggttcttctc 28924821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 36 - 213
Target Start/End: Original strand, 20820105 - 20820279
Alignment:
Q  36 atcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaagaa 135  Q
    |||||||| ||||||||| |||||||||| |||||||| |||||| | || |||| ||||||||||||||||||| ||||||| ||||||||||||||||    
T  20820105 atcatactcatcatcaaa-tacaacattataaacctgaatcttatgcattctctt-caaaatcatcattaaccctaattttcc-aattttaccttaagaa 20820201  T
Q  136 cagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 213  Q
    | ||| ||||  |||||  |||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  20820202 cggttgaattacttaatcatcagaaattatatattaacactattgaaagatgatcccacccttaccttagaattgcaa 20820279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 36 - 213
Target Start/End: Original strand, 20827205 - 20827379
Alignment:
Q  36 atcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaagaa 135  Q
    |||||||| ||||||||| |||||||||| |||||||| |||||| | || |||| ||||||||||||||||||| ||||||| ||||||||||||||||    
T  20827205 atcatactcatcatcaaa-tacaacattataaacctgaatcttatgcattctctt-caaaatcatcattaaccctaattttcc-aattttaccttaagaa 20827301  T
Q  136 cagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 213  Q
    | ||| ||||  |||||  |||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  20827302 cggttgaattacttaatcatcagaaattatatattaacactattgaaagatgatcccacccttaccttagaattgcaa 20827379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 27 - 252
Target Start/End: Complemental strand, 28889514 - 28889291
Alignment:
Q  27 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttt- 125  Q
    ||||| ||||||||||||||||| ||| |||||| | | |||||||| | |||  | ||||||| |||||||||||| || ||| ||||||||||||||     
T  28889514 gattaggaaatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaattttcccaattttt 28889417  T
Q  126 accttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagca 225  Q
    |||||||||||| || ||| | ||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||||||||||| | |||| ||||    
T  28889416 accttaagaacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacggcaaa-agca 28889318  T
Q  226 cagcaaatcagttcctaagttcttctc 252  Q
      |||||||| |||||| |||||||||    
T  28889317 atgcaaatcaattcctaggttcttctc 28889291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 212
Target Start/End: Original strand, 34829962 - 34830146
Alignment:
Q  27 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 125  Q
    ||||||||||||||||| ||||||||| |||||||    |||| ||||||||| | |||| |||||||||||| ||| | ||||| ||| ||  ||||||    
T  34829962 gattaagaaatcatactgatcatcaaattacaacacattaaacatgattcttacatcttt-ctttcaaaatcagcatcataccctaattctc--aatttt 34830058  T
Q  126 acctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 212  Q
    | ||| ||||||  ||| ||| |||| |||||||||||||||| ||||  | |||||||||||||||||||||||||||||||||||||    
T  34830059 atcttcaagaactattctattagattgattttcagaaattatacattaa-attattgaaagataatcccacccttaccttagaattgca 34830146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 204
Target Start/End: Complemental strand, 18408083 - 18407944
Alignment:
Q  66 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt--aagaacagttcaatt-gattaattttcagaaat 162  Q
    |||| ||||||||| ||| || |||||||||||| ||| |||||| |||  |||||||||   ||  ||||||| ||||||| ||| |||||||||||||    
T  18408083 aaacatgattcttacaccattcctttcaaaatcagcatcaaccctaatt--cccaatttttattttcaagaacaattcaattagatcaattttcagaaat 18407986  T
Q  163 tatatattatgactattgaaagataatcccacccttacctta 204  Q
    |||||||||||| |||||| ||||| || |||||||||||||    
T  18407985 tatatattatgattattgagagatagtctcacccttacctta 18407944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 204
Target Start/End: Complemental strand, 23111339 - 23111200
Alignment:
Q  66 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt--aagaacagttcaatt-gattaattttcagaaat 162  Q
    |||| ||||||||| ||| |  |||||||||||| ||| |||||| |||  |||||||||   ||  ||||||| ||||||| ||| |||||||||||||    
T  23111339 aaacatgattcttacaccatccctttcaaaatcagcatcaaccctaatt--cccaatttttattttcaagaacaattcaattagatcaattttcagaaat 23111242  T
Q  163 tatatattatgactattgaaagataatcccacccttacctta 204  Q
    |||||| ||||| |||||| ||||| || |||||||||||||    
T  23111241 tatatactatgattattgagagatagtctcacccttacctta 23111200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 22438802 - 22438746
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttaga 206  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||||    
T  22438802 aattttcagaaattatacattatgattattgagagatagtctcacccttaccttaga 22438746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 205
Target Start/End: Complemental strand, 38144591 - 38144536
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 205  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  38144591 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 38144536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 150 - 204
Target Start/End: Original strand, 19512387 - 19512441
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 204  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  19512387 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 19512441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 150 - 204
Target Start/End: Complemental strand, 28370109 - 28370055
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 204  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  28370109 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 28370055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 23528634 - 23528686
Alignment:
Q  153 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 205  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  23528634 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 23528686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 180; Significance: 3e-97; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 15 - 252
Target Start/End: Complemental strand, 50161 - 49922
Alignment:
Q  15 atcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttatt 114  Q
    ||||||||||||||||||||||||||||||||| |  || || ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  50161 atcaacaacatggattaagaaatcatactaatctttcaaatataacattataaacctgattcttacaccttttctttcaaaatcatcattaacccttatt 50062  T
Q  115 ttcccaatttt-accttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 213  Q
    ||||||||||| ||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  50061 ttcccaatttttaccttaagaacagtttaattgattaatttttagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaa 49962  T
Q  214 agacaaatagcacagc-aaatcagttcctaagttcttctc 252  Q
    |||||||||||||| | |||||||||||||||||||||||    
T  49961 agacaaatagcacaacaaaatcagttcctaagttcttctc 49922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 172; Significance: 2e-92; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 14 - 252
Target Start/End: Complemental strand, 20008138 - 20007900
Alignment:
Q  14 catcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttat 113  Q
    ||||||||| || |||||||||| |||||||| ||||||||||||||| || ||||||||| |||||||||||||||||||||||||| |||||||| |     
T  20008138 catcaacaatatagattaagaaaacatactaaacatcaaagtacaacaatataaacctgatccttataccttttctttcaaaatcatccttaaccctaaa 20008039  T
Q  114 tttcccaattttaccttaagaacagttcaattgattaa-ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 212  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  20008038 tttcccaattttaccttaagaacagttcaattgattaatttttcataaattatatattatgactattgaaagatgatcccacccttaccttagaattgca 20007939  T
Q  213 aagacaaatagcacagcaaatcagttcctaagttcttctc 252  Q
    |||||||| |||||||||||| ||||||||||||||||||    
T  20007938 aagacaaa-agcacagcaaatgagttcctaagttcttctc 20007900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 15 - 252
Target Start/End: Complemental strand, 9099260 - 9099026
Alignment:
Q  15 atcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttatt 114  Q
    |||||||| || ||||| ||||||||||||||||||||| |||||||||| |||||||||||||| || ||||||| || |||||||||||||||| | |    
T  9099260 atcaacaatatagattaggaaatcatactaatcatcaaa-tacaacattataaacctgattcttacacattttctt-cagaatcatcattaaccctaaat 9099163  T
Q  115 ttcccaattttaccttaagaacagttcaattgattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 213  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  9099162 ttcccaattttaccttaagaacagttaaattgattaatttttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattgcaa 9099063  T
Q  214 agacaaatagcacagcaaatcagttcctaagttcttctc 252  Q
    ||| ||  ||  |||||||||| |||||||| |||||||    
T  9099062 agataa--agtgcagcaaatcaattcctaagctcttctc 9099026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 33 - 252
Target Start/End: Complemental strand, 21364650 - 21364436
Alignment:
Q  33 gaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaa 132  Q
    ||||||||| ||||||||||| |||||||||| |||||| | ||||| |  |||||||  |||||   |||||||||| |||| |||||||||||| |||    
T  21364650 gaaatcatattaatcatcaaa-tacaacattataaacctaagtcttacatattttcttcaaaaatgc-cattaaccctaattt-cccaattttaccataa 21364554  T
Q  133 gaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaa 232  Q
     ||||||| ||||| ||||||||||||||| ||||||||| | || |||| |||||||||||||||||||| |||||||||||||||| |||||||||||    
T  21364553 -aacagttaaattgcttaattttcagaaatcatatattatcattactgaaggataatcccacccttacctttgaattgcaaagacaaa-agcacagcaaa 21364456  T
Q  233 tcagttcctaagttcttctc 252  Q
     || |||||| |||||||||    
T  21364455 acaattcctaggttcttctc 21364436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 33 - 252
Target Start/End: Complemental strand, 23968632 - 23968418
Alignment:
Q  33 gaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaa 132  Q
    ||||||||| ||||||||||| |||||||||| |||||| | ||||| |  |||||||  |||||   |||||||||| |||| |||||||||||| |||    
T  23968632 gaaatcatattaatcatcaaa-tacaacattataaacctaagtcttacatattttcttcaaaaatgc-cattaaccctaattt-cccaattttaccataa 23968536  T
Q  133 gaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaa 232  Q
     ||||||| ||||| ||||||||||||||| ||||||||| | || |||| |||||||||||||||||||| |||||||||||||||| |||||||||||    
T  23968535 -aacagttaaattgcttaattttcagaaatcatatattatcattactgaaggataatcccacccttacctttgaattgcaaagacaaa-agcacagcaaa 23968438  T
Q  233 tcagttcctaagttcttctc 252  Q
     || |||||| |||||||||    
T  23968437 acaattcctaggttcttctc 23968418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 152 - 252
Target Start/End: Complemental strand, 11288721 - 11288623
Alignment:
Q  152 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaatcagttcctaagttcttct 251  Q
    |||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||| |||||||| | |||||| |||||||||||||| ||||||    
T  11288721 ttttcagaaattatatattaagatcattgaaagataatcccacccttaccttagaattgccaagacaaa-aacacagc-aatcagttcctaagctcttct 11288624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 27 - 252
Target Start/End: Original strand, 31252300 - 31252526
Alignment:
Q  27 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 125  Q
    ||||||||||||||||  | ||||||| |||||||    |||| | ||||||| |||||| |||||||||||| | | | ||||| ||| ||  ||||||    
T  31252300 gattaagaaatcatacatagcatcaaattacaacacgttaaacataattcttacaccttt-ctttcaaaatcagcctcataccctaattctc--aatttt 31252396  T
Q  126 acctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa--at 221  Q
    | ||| ||||||  ||||||| ||||||||||||||||||||||||||| |  ||| |||||||||| ||||||||||||||||||||||||||||  |     
T  31252397 atcttcaagaactattcaattagattaattttcagaaattatatattataatcattaaaagataatctcacccttaccttagaattgcaaagacaaagaa 31252496  T
Q  222 agcacagcaaatcagttcctaagttcttctc 252  Q
    | |||||| |||| |||||||||||||||||    
T  31252497 aacacagc-aatcggttcctaagttcttctc 31252526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 152 - 220
Target Start/End: Original strand, 15458492 - 15458560
Alignment:
Q  152 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 220  Q
    ||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||    
T  15458492 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaa 15458560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 152 - 220
Target Start/End: Original strand, 15465087 - 15465155
Alignment:
Q  152 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 220  Q
    ||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||    
T  15465087 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaa 15465155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 212
Target Start/End: Complemental strand, 10986235 - 10986173
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 212  Q
    |||||| |||||||||| ||||||| |||||||||||| || |||||||||||||||||||||    
T  10986235 aatttttagaaattatagattatgattattgaaagatagtctcacccttaccttagaattgca 10986173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 220
Target Start/End: Complemental strand, 34640041 - 34639971
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 220  Q
    ||||||||||||||||| |||| || |||||| ||||| || |||||||||||||||||||| ||||||||    
T  34640041 aattttcagaaattatagattaagattattgagagatagtctcacccttaccttagaattgcgaagacaaa 34639971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 220
Target Start/End: Complemental strand, 34646715 - 34646645
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 220  Q
    ||||||||||||||||| |||| || |||||| ||||| || |||||||||||||||||||| ||||||||    
T  34646715 aattttcagaaattatagattaagattattgagagatagtctcacccttaccttagaattgcgaagacaaa 34646645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 244
Target Start/End: Complemental strand, 28288537 - 28288472
Alignment:
Q  177 attgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaatcagttcctaag 244  Q
    ||||| ||||| || ||||||||||||||||||||||||||||| | |||||| ||||||||||||||    
T  28288537 attgagagatagtctcacccttaccttagaattgcaaagacaaa-aacacagc-aatcagttcctaag 28288472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 205
Target Start/End: Complemental strand, 29614201 - 29614146
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 205  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  29614201 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 29614146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 150 - 204
Target Start/End: Original strand, 4477858 - 4477912
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 204  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  4477858 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 4477912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 150 - 204
Target Start/End: Original strand, 23839199 - 23839253
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 204  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  23839199 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 23839253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 150 - 212
Target Start/End: Complemental strand, 24512898 - 24512836
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 212  Q
    ||||||||||||||||||| ||||| |||||| ||||| || |||||| |||||||| |||||    
T  24512898 aattttcagaaattatatactatgattattgagagatagtctcaccctcaccttagatttgca 24512836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 12168366 - 12168418
Alignment:
Q  153 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 205  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  12168366 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 12168418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 19287275 - 19287327
Alignment:
Q  153 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 205  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  19287275 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 19287327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 19785921 - 19785869
Alignment:
Q  153 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 205  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  19785921 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 19785869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 19878459 - 19878511
Alignment:
Q  153 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 205  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  19878459 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 19878511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 205
Target Start/End: Complemental strand, 930150 - 930095
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 205  Q
    |||||||||||| |||| ||||||| |||||| ||||| || ||||||||||||||    
T  930150 aattttcagaaactatagattatgattattgagagatagtctcacccttaccttag 930095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 18800438 - 18800493
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 205  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||| ||||    
T  18800438 aattttcagaaattatagattatgattattgagagatagtctcacccttacattag 18800493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 220
Target Start/End: Original strand, 24563475 - 24563508
Alignment:
Q  187 aatcccacccttaccttagaattgcaaagacaaa 220  Q
    |||| |||||||||||||||||||||||||||||    
T  24563475 aatctcacccttaccttagaattgcaaagacaaa 24563508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 9187498 - 9187550
Alignment:
Q  152 ttttcagaaattatatattatgactattgaaagataatcccacccttacctta 204  Q
    |||||||||||||| ||||| || |||||| ||||| || |||||||||||||    
T  9187498 ttttcagaaattatgtattaagattattgagagatagtctcacccttacctta 9187550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 19884235 - 19884287
Alignment:
Q  153 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 205  Q
    |||||||||||||| ||||||| |||||| ||||| || |||||| |||||||    
T  19884235 tttcagaaattatagattatgattattgagagatagtctcaccctaaccttag 19884287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 171; Significance: 6e-92; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 15 - 252
Target Start/End: Original strand, 135304 - 135540
Alignment:
Q  15 atcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttatt 114  Q
    ||||||||||| ||||||||||||||||||| ||||||| |||||||  | |||||||||||||| |||||||||||||||||||||||||||||||| |    
T  135304 atcaacaacatagattaagaaatcatactaa-catcaaattacaacacaataaacctgattcttacaccttttctttcaaaatcatcattaacccttaat 135402  T
Q  115 ttcccaattttacctt-aagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 213  Q
    | | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  135403 t-ctcaattttacctttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatctcacgcttaccttagaattgcaa 135501  T
Q  214 agacaaatagcacagcaaatcagttcctaagttcttctc 252  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  135502 agacaaatagcacagcaaatcagttcctaagctcttctc 135540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 144; Significance: 8e-76; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 66 - 252
Target Start/End: Complemental strand, 2051 - 1865
Alignment:
Q  66 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt-aagaacagttcaattgattaattttcagaaatta 164  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||| || ||||||||||| || ||||||||||||||||||||||||||||||||||    
T  2051 aaacctaattcttacaccttttctttcaaaatcatcattaacccttaatt-cccaattttactttcaagaacagttcaattgattaattttcagaaatta 1953  T
Q  165 tatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaatcagttcctaagttcttctc 252  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||    
T  1952 tatattatgactattgaaagataatcccacccttaccttacaattgcaaagacaaaaagcacagcaaatccgttcctaagttcttctc 1865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 15 - 248
Target Start/End: Original strand, 9201 - 9434
Alignment:
Q  15 atcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttatt 114  Q
    ||||||||||| |||| |||||||||||||| ||||||| |||||||  | |||||| ||||||| |||||||||||||||||||||||||||||||| |    
T  9201 atcaacaacatagattgagaaatcatactaaacatcaaattacaacacaataaacctaattcttacaccttttctttcaaaatcatcattaacccttaat 9300  T
Q  115 ttcccaattttacctt-aagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 213  Q
    | ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |     
T  9301 t-cccaattttacttttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgtag 9399  T
Q  214 agacaaatagcacagcaaatcag-ttcctaagttct 248  Q
    ||||| | | |||||||| |||| ||||||||||||    
T  9400 agacagaga-cacagcaattcagtttcctaagttct 9434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 40 - 252
Target Start/End: Original strand, 889 - 1098
Alignment:
Q  40 tactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaagaacagt 139  Q
    ||||||||||||||  ||||| ||| |||||| | ||||| || ||||||| |||||||  |||||||||| ||||||||||||||||| ||||||||||    
T  889 tactaatcatcaaac-acaactttataaacctaaatcttacacattttctt-caaaatcgccattaaccctaattttcccaattttaccataagaacagt 986  T
Q  140 tcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaatcagttc 239  Q
    | ||||| ||||||||||||||| ||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||    
T  987 taaattgcttaattttcagaaatcatatattatcactattgagagatgatcccacccttaccttagaattgcaaagacaaa-agcacagcaaatcaattc 1085  T
Q  240 ctaagttcttctc 252  Q
    ||| |||||||||    
T  1086 ctaggttcttctc 1098  T

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Target: scaffold1469 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold1469
Description:

Target: scaffold1469; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 27 - 220
Target Start/End: Original strand, 1234 - 1425
Alignment:
Q  27 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttta 126  Q
    ||||| ||||||||||||||||||||  || ||||||  |||||||| |||||  | ||||||| ||||||||||||||  ||| |||||||||||||||    
T  1234 gattaggaaatcatactaatcatcaat-tataacattgtaaacctgaatcttacgcattttctt-caaaatcatcattagacctaattttcccaatttta 1331  T
Q  127 ccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 220  Q
    |||||||||||||| ||||| ||||||||||||||  ||||||||  |||||||||||  ||||||||||||||||||||||||||||||||||    
T  1332 ccttaagaacagttaaattgtttaattttcagaaagcatatattaacactattgaaaggaaatcccacccttaccttagaattgcaaagacaaa 1425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 34 - 246
Target Start/End: Complemental strand, 16233 - 16023
Alignment:
Q  34 aaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaag 133  Q
    |||||||||||||||||||| |||||||| |  ||||||||||||  || ||||||| ||||||||||||||||||| | || || | ||||| |||||     
T  16233 aaatcatactaatcatcaaa-tacaacatcatgaacctgattcttgcacattttctt-caaaatcatcattaaccctaaatt-ccaatttttatcttaaa 16137  T
Q  134 aacagttcaattgattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaa 232  Q
    ||||||| |||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |   | || || |||||||||    
T  16136 aacagttaaattgattaatttttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattgtaggaagaattaacacagcaaa 16037  T
Q  233 tcagttcctaagtt 246  Q
    |||| |||||||||    
T  16036 tcagctcctaagtt 16023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 66 - 252
Target Start/End: Original strand, 10156 - 10341
Alignment:
Q  66 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttac-cttaagaacagttcaattgattaattttcagaaatta 164  Q
    |||| ||||||||| ||| |  |||||||||| | ||| |||||| |||  ||||||||||  || | ||||| ||||||||||||||||||||||||||    
T  10156 aaacatgattcttacaccatccctttcaaaattagcatcaaccctaatt--cccaattttattctcatgaacaattcaattgattaattttcagaaatta 10253  T
Q  165 tatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaatcagttcctaagttcttctc 252  Q
     ||||||||| ||||| ||||||||| ||||||||||||||||||| | ||||||| ||||||||||||| |||||||||||||||||    
T  10254 catattatgattattggaagataatctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttcttctc 10341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 71 - 252
Target Start/End: Complemental strand, 493162 - 492981
Alignment:
Q  71 tgattcttataccttttctttcaaaatcatcatta-acccttattttcccaattttacctt-aagaacagttcaatt-gattaattttcagaaattatat 167  Q
    ||||||||| ||||||||||||||||||| ||||| ||||| ||| ||   |||||| ||  ||||||  ||| ||| |||||||||||||||||||||     
T  493162 tgattcttacaccttttctttcaaaatcagcattataccctaattctct--attttatctccaagaactattccattagattaattttcagaaattatac 493065  T
Q  168 attatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaatcagttcctaagttcttctc 252  Q
    |||| || ||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||    
T  493064 atta-gattattgaaagataatctcacccttaccttagaattgcagagacaaaaagcacagcaaatccgttcctaagttcttctc 492981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 77; Significance: 8e-36; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 33 - 216
Target Start/End: Complemental strand, 91374 - 91191
Alignment:
Q  33 gaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttt---acct 129  Q
    ||||||||| ||||||||||| |||||||||| |||||| | ||||| || ||||||| ||||||   |||||||||| |||| |||||||||   |||     
T  91374 gaaatcatattaatcatcaaa-tacaacattataaacctaaatcttacacattttctt-caaaattgccattaaccctaattt-cccaatttttttacca 91278  T
Q  130 taagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaga 216  Q
    ||| ||||||| ||||| ||||||||||||||| ||||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  91277 taaaaacagttaaattgcttaattttcagaaatcatatattatcattattgaaagatgatcccacccttaccttagaattgcaaaga 91191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 33 - 216
Target Start/End: Complemental strand, 97100 - 96917
Alignment:
Q  33 gaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttt---acct 129  Q
    ||||||||| ||||||||||| |||||||||| |||||| | ||||| || ||||||| ||||||   |||||||||| |||| |||||||||   |||     
T  97100 gaaatcatattaatcatcaaa-tacaacattataaacctaaatcttacacattttctt-caaaattgccattaaccctaattt-cccaatttttttacca 97004  T
Q  130 taagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaga 216  Q
    ||| ||||||| ||||| ||||||||||||||| ||||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  97003 taaaaacagttaaattgcttaattttcagaaatcatatattatcattattgaaagatgatcccacccttaccttagaattgcaaaga 96917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 111885 - 111938
Alignment:
Q  152 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 205  Q
    ||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  111885 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 111938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 150 - 252
Target Start/End: Complemental strand, 10250 - 10148
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaatcagttcctaagttctt 249  Q
    ||||||||||||||||| ||||||| |||||| ||||| |||||||||||||||||||||| | ||||||| ||||||||||||| ||||||||||||||    
T  10250 aattttcagaaattatagattatgattattgagagatagtcccacccttaccttagaattgtatagacaaaaagcacagcaaatccgttcctaagttctt 10151  T
Q  250 ctc 252  Q
    |||    
T  10150 ctc 10148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 11111 - 11042
Alignment:
Q  177 attgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaatcagttcctaagtt 246  Q
    |||||| ||||||||||||||||||||||||||  |   | || || ||||||||||||| |||||||||    
T  11111 attgaaggataatcccacccttaccttagaattttaggaagaattaacacagcaaatcagctcctaagtt 11042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 150 - 252
Target Start/End: Complemental strand, 1580 - 1478
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaatcagttcctaagttctt 249  Q
    ||||||||||||||||| ||||||| |||||| ||||| |||||||||||||||||||||| | ||||||| ||||||||||||| ||||||||||||||    
T  1580 aattttcagaaattatagattatgattattgagagatagtcccacccttaccttagaattgtatagacaaaaagcacagcaaatccgttcctaagttctt 1481  T
Q  250 ctc 252  Q
    |||    
T  1480 ctc 1478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 220
Target Start/End: Complemental strand, 6035 - 5842
Alignment:
Q  27 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 125  Q
    ||||||||||||||||  | ||||||| ||||||||   |||| | ||||||| |||||| |||||||||||| | | | ||||| ||| ||  ||||||    
T  6035 gattaagaaatcatacataacatcaaattacaacatgttaaacataattcttacaccttt-ctttcaaaatcagcctcataccctaattctc--aatttt 5939  T
Q  126 acctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 220  Q
    | ||| ||||||  ||||||| ||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||    
T  5938 atcttcaagaactattcaattagattaattttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaa 5842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 146 - 248
Target Start/End: Complemental strand, 3461 - 3359
Alignment:
Q  146 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaatcagttcctaagt 245  Q
    ||||||||||||||||||||||||||     |||||||||||||  ||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||    
T  3461 gattaattttcagaaattatatattaaattcattgaaagataatatcacccttaccttagaattgcaaagacaaaaagcacggcaaatccgttcctaagt 3362  T
Q  246 tct 248  Q
    |||    
T  3361 tct 3359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 212
Target Start/End: Complemental strand, 23748 - 23562
Alignment:
Q  27 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 125  Q
    ||||||||||||||||| | ||||||| |||||||    |||| ||||||||| | ||||||||||||||||| ||| | ||||| ||| ||  ||||||    
T  23748 gattaagaaatcatactgaacatcaaattacaacacattaaacatgattcttacatcttttctttcaaaatcagcatcacaccctaattctc--aatttt 23651  T
Q  126 acctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 212  Q
      ||| ||||||  |||  || ||||||||||||||||||||| |||||||  ||| ||||||||||||||||||||||||||||||||    
T  23650 gtcttcaagaactattcttttagattaattttcagaaattatacattatgatcattcaaagataatcccacccttaccttagaattgca 23562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 152 - 220
Target Start/End: Complemental strand, 13947 - 13879
Alignment:
Q  152 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 220  Q
    ||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||    
T  13947 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaa 13879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 152 - 252
Target Start/End: Original strand, 6 - 104
Alignment:
Q  152 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaatcagttcctaagttcttct 251  Q
    ||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||  ||  |||||| ||| |||||||| ||||||    
T  6 ttttcagaaatcatatattagaactattgaaagataatcccacccttaccttagaattgcaaagataa--agtgcagcaagtcaattcctaagctcttct 103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 212
Target Start/End: Complemental strand, 40725 - 40524
Alignment:
Q  13 acatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaaccctta 112  Q
    |||||||||  || |||||||||||||| || | ||||||| |||||||    |||| |||| |||| ||| || |||||||||||| ||| |||||| |    
T  40725 acatcaacattatagattaagaaatcattctgaacatcaaattacaacacgttaaacatgatccttacaccattcctttcaaaatcagcatcaaccctaa 40626  T
Q  113 ttttcccaattttaccttaagaacagttcaattgatta--attttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattg 210  Q
    ||| || | ||||| || ||||||| ||||  | |  |  |||||||||||||||||| ||||| |||||| ||||| || ||||||||||||||| |||    
T  40625 tttcccaatttttatctcaagaacaattcatgttaaaacaattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttg 40526  T
Q  211 ca 212  Q
    ||    
T  40525 ca 40524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 27 - 234
Target Start/End: Original strand, 73161 - 73365
Alignment:
Q  27 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 125  Q
    ||||||||||||||||  | ||||||| |||||||    |||| ||||||||| ||| ||||||||||||||| ||| | ||||| ||| ||  ||||||    
T  73161 gattaagaaatcatacggaacatcaaattacaacacattaaacatgattcttacaccgtttctttcaaaatcaacatcacaccctaattctc--aatttt 73258  T
Q  126 acctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatag 223  Q
    | ||| |||| |  | | ||| |||||||||||| |||||||| |||||||  |||||||||||||||||||||||||| | ||||||    | ||||||    
T  73259 atcttcaagagctatcctattagattaattttcataaattatacattatgatcattgaaagataatcccacccttacctcataattgc----agaaatag 73354  T
Q  224 cacagcaaatc 234  Q
    |||||||||||    
T  73355 cacagcaaatc 73365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 150 - 220
Target Start/End: Original strand, 111686 - 111756
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 220  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||||||||| ||||||||    
T  111686 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgcgaagacaaa 111756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 205
Target Start/End: Complemental strand, 11905 - 11850
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 205  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  11905 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 11850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 10609 - 10546
Alignment:
Q  146 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaatt 209  Q
    ||||||||||||||||||||| |||| ||  |||||||||||||||||| ||||||||||||||    
T  10609 gattaattttcagaaattatacattaagatcattgaaagataatcccacacttaccttagaatt 10546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 66 - 204
Target Start/End: Original strand, 16736 - 16875
Alignment:
Q  66 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt--aagaacagttcaatt-gattaattttcagaaat 162  Q
    |||| ||||||||| ||| || |||||||||||| ||| |||||| |||  |||||||||   ||  ||||||| ||||||| ||| |||||||||||||    
T  16736 aaacatgattcttaaaccattcctttcaaaatcagcatcaaccctaatt--cccaatttttattttcaagaacaattcaattagatcaattttcagaaat 16833  T
Q  163 tatatattatgactattgaaagataatcccacccttacctta 204  Q
    |||||| ||||| |||||| ||||| || |||||||||||||    
T  16834 tatatactatgattattgagagatagtctcacccttacctta 16875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 206
Target Start/End: Original strand, 135349 - 135530
Alignment:
Q  27 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttta 126  Q
    |||||||||||||| || | ||||||| |||||||    |||| |||| |||| ||| || |||||||||||| ||| |||||| |||| || | |||||    
T  135349 gattaagaaatcattctgaacatcaaattacaacacattaaacatgatccttacaccattcctttcaaaatcagcatcaaccctaatttcccaattttta 135448  T
Q  127 ccttaagaacagttcaattgatta--attttcagaaattatatattatgactattgaaagataatcccacccttaccttaga 206  Q
     || ||||||| ||||  | |  |  |||||||||||||||||| ||||| |||||| ||||| || |||||||||||||||    
T  135449 tctcaagaacaattcatgttaaaacaattttcagaaattatatactatgattattgagagatagtctcacccttaccttaga 135530  T

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Target: scaffold2054 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 717 - 770
Alignment:
Q  152 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 205  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||||||||||    
T  717 ttttcagaaattatatattaagatcattgaaagataatcccacccttaccttag 770  T

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Target: scaffold0099 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 203
Target Start/End: Original strand, 12833 - 13019
Alignment:
Q  27 gattaagaaatcatactaatcatcaaagtacaacattaaaaacct-gattcttataccttttctttcaaaatcat-cattaacccttattttccc--aat 122  Q
    ||||| |||||||||||||||||  || |||||||||| |||||| ||||||||   | |||| |||| |||||| |||||||||| | ||||||  | |    
T  12833 gattaggaaatcatactaatcatacaaatacaacattataaacctagattcttaacacatttccttcagaatcatacattaaccctaaatttccccaatt 12932  T
Q  123 tttacc-ttaagaacagttcaa---ttgattaa-ttttcagaaattatatattatgactattg-aaagataatcccacccttacctt 203  Q
    |||||| |||||||||||| ||   | |||||| |||| |||||| ||||||||  ||||||| |||||||||||||||||||||||    
T  12933 tttacctttaagaacagttaaaatttagattaattttttagaaatcatatattagaactattgtaaagataatcccacccttacctt 13019  T

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Target: scaffold0146 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 204
Target Start/End: Original strand, 13548 - 13687
Alignment:
Q  66 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt--aagaacagttcaatt-gattaattttcagaaat 162  Q
    |||| ||||||||| ||| || |||||||||||| ||| |||||| |||  |||||||||   ||  ||||||| ||||||| ||| |||||||||||||    
T  13548 aaacatgattcttacaccattcctttcaaaatcagcatcaaccctaatt--cccaatttttattttcaagaacaattcaattagatcaattttcagaaat 13645  T
Q  163 tatatattatgactattgaaagataatcccacccttacctta 204  Q
    ||| ||||| || |||||| ||||| || |||||||||||||    
T  13646 tatgtattaagattattgagagatagtctcacccttacctta 13687  T

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Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 204
Target Start/End: Original strand, 116877 - 116951
Alignment:
Q  131 aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 204  Q
    ||||||| ||||||| ||| ||||||||||||||||||| ||||| |||||| ||||| || |||||||||||||    
T  116877 aagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 116951  T

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Target: scaffold0924 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 205
Target Start/End: Complemental strand, 805 - 750
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 205  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  805 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 750  T

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Target: scaffold0461 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 204
Target Start/End: Complemental strand, 147 - 8
Alignment:
Q  66 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt--aagaacagttcaatt-gattaattttcagaaat 162  Q
    |||| ||||||||| ||| || |||||||||||| ||  |||||| |||  |||||||||   ||  ||||||| ||||||| ||| |||||||||||||    
T  147 aaacatgattcttacaccattcctttcaaaatcagcaacaaccctaatt--cccaatttttattttcaagaacaattcaattagatcaattttcagaaat 50  T
Q  163 tatatattatgactattgaaagataatcccacccttacctta 204  Q
    ||| ||||| || |||||| ||||| || |||||||||||||    
T  49 tatgtattaagattattgagagatagtctcacccttacctta 8  T

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Target: scaffold0247 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 11342 - 11397
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 205  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  11342 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 11397  T

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Target: scaffold0154 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 30858 - 30913
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 205  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  30858 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 30913  T

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Target: scaffold0129 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 220
Target Start/End: Complemental strand, 45326 - 45259
Alignment:
Q  153 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 220  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||| |||| ||||||||    
T  45326 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagatttgcgaagacaaa 45259  T

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Target: scaffold0020 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 204
Target Start/End: Complemental strand, 102002 - 101928
Alignment:
Q  131 aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 204  Q
    ||||||| ||||||| ||| ||||||||| ||||||||| ||||| |||||| ||||| || |||||||||||||    
T  102002 aagaacaattcaattagatcaattttcaggaattatatactatgattattgagagatagtctcacccttacctta 101928  T

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Target: scaffold0235 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 212
Target Start/End: Complemental strand, 22646 - 22585
Alignment:
Q  151 attttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 212  Q
    |||||||||||||||||| ||||| |||||| ||||| || |||||||||||| || |||||    
T  22646 attttcagaaattatatactatgattattgagagatagtctcacccttaccttggatttgca 22585  T

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Target: scaffold0310 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 17644 - 17700
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttaga 206  Q
    ||||||||||||||||| ||||||  |||||| ||||| || |||||||||||||||    
T  17644 aattttcagaaattatacattatggttattgagagatagtctcacccttaccttaga 17700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 202
Target Start/End: Complemental strand, 14450 - 14398
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 202  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||    
T  14450 aattttcagaaattatagattatgattattgagagatagtctcacccttacct 14398  T

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Target: scaffold0456 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 932 - 987
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 205  Q
    |||||||||||| |||| ||||||| |||||| ||||| || ||||||||||||||    
T  932 aattttcagaaactatagattatgattattgagagatagtctcacccttaccttag 987  T

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Target: scaffold0456; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 8077 - 8132
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 205  Q
    |||||||||||| |||| ||||||| |||||| ||||| || ||||||||||||||    
T  8077 aattttcagaaactatagattatgattattgagagatagtctcacccttaccttag 8132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 18170 - 18225
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 205  Q
    |||||||| |||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  18170 aattttcaaaaattatagattatgattattgagagatagtctcacccttaccttag 18225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1461 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1461
Description:

Target: scaffold1461; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 204
Target Start/End: Complemental strand, 1543 - 1485
Alignment:
Q  146 gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 204  Q
    ||||||||||||||||||  |||||| ||  |||| ||||||||| |||||||||||||    
T  1543 gattaattttcagaaattgcatattaagatcattgcaagataatctcacccttacctta 1485  T

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Target: scaffold0317 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 204
Target Start/End: Original strand, 1387 - 1441
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 204  Q
    |||||||| ||||||||||| ||||  ||||||||||| || |||||||||||||    
T  1387 aattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 1441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 204
Target Start/End: Complemental strand, 34330 - 34276
Alignment:
Q  150 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 204  Q
    ||||||||||||||||||| ||||| ||| || ||||| || |||||||||||||    
T  34330 aattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 34276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 214
Target Start/End: Original strand, 1181 - 1242
Alignment:
Q  153 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaa 214  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||  |||||||    
T  1181 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcaaa 1242  T

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Target: scaffold0796 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 246
Target Start/End: Complemental strand, 1784 - 1691
Alignment:
Q  153 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaatcagttcctaagtt 246  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||  ||| |   | || || ||||||||||||| |||||||||    
T  1784 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgtaggaagaattaacacagcaaatcagctcctaagtt 1691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 246
Target Start/End: Complemental strand, 5807 - 5714
Alignment:
Q  153 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaatcagttcctaagtt 246  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||  ||| |   | || || ||||||||||||| |||||||||    
T  5807 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgtaggaagaattaacacagcaaatcagctcctaagtt 5714  T

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Target: scaffold0117 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 1950 - 1897
Alignment:
Q  152 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 205  Q
    ||||||||||||||| ||||||| |||||| | ||| || ||||||||||||||    
T  1950 ttttcagaaattatagattatgattattgagatatagtctcacccttaccttag 1897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 8627 - 8574
Alignment:
Q  152 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 205  Q
    ||||||||||||||| ||||||| |||||| | ||| || ||||||||||||||    
T  8627 ttttcagaaattatagattatgattattgagatatagtctcacccttaccttag 8574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 294 - 346
Alignment:
Q  153 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 205  Q
    |||||||||||||| ||||||  |||||| ||||| || ||||||||||||||    
T  294 tttcagaaattatagattatggttattgagagatagtctcacccttaccttag 346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 50182 - 50234
Alignment:
Q  153 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 205  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  50182 tttcaggaattatagattatgattattgagagatagtctcacccttaccttag 50234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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