View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7363_low_7 (Length: 406)
Name: NF7363_low_7
Description: NF7363
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7363_low_7 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 369; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 17 - 389
Target Start/End: Original strand, 32363777 - 32364149
Alignment:
| Q |
17 |
tcattccagttcctttggcacctcgacgcagtacaataccttgaaagagatagactggatttggtagagtctgcataaaaaggtagtgcaaaagaatgtg |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32363777 |
tcattccagttcctttggcacctcgacgcagtacaataccttgaaagagatagactggatttggtagagtctgcataaaaaggtagtgcaaaagaatgtg |
32363876 |
T |
|
| Q |
117 |
gataaactaactctaggaagtatacaatggcaaccatcttcatcaaatttatataccaaaaggcatcaaataaatatctatcaaagaacaaattctcacc |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
32363877 |
gataaactaactctaggaagtatacaatggcaaccatcttcatcaaatttatataccaaaaggcatcaaataaatatctatcaaagaacagattctcacc |
32363976 |
T |
|
| Q |
217 |
tttataactgcattgatttctctgtgtgtcagactttttattatgagtacctcatcatctgcaaaataacaaaattaatttactcatttaataaatgtaa |
316 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32363977 |
tttataactgcattgatttctctgtgtgtcagactttttattatgagtacctcatcatctgcaaaataacaaaattaatttactcatttaataaatgtaa |
32364076 |
T |
|
| Q |
317 |
acactagatttctagttgagtgaaattctagatttctagttacacgggatagggaacctatctaccagttgat |
389 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32364077 |
acactagatttctagttgagtgaaattctagatttctagttacacgggatagggaacctatctaccagttgat |
32364149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University