View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7364_low_1 (Length: 523)

Name: NF7364_low_1
Description: NF7364
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7364_low_1
NF7364_low_1
[»] chr1 (45 HSPs)
chr1 (1-508)||(3544086-3544593)
chr1 (156-508)||(1247726-1248078)
chr1 (11-504)||(20987807-20988299)
chr1 (31-506)||(5809231-5809706)
chr1 (46-508)||(19014012-19014476)
chr1 (197-508)||(13867021-13867325)
chr1 (224-459)||(28358586-28358823)
chr1 (348-508)||(45795923-45796083)
chr1 (224-351)||(5497891-5498018)
chr1 (224-351)||(32352520-32352647)
chr1 (224-351)||(48072634-48072761)
chr1 (245-491)||(25504221-25504469)
chr1 (276-504)||(40562818-40563046)
chr1 (224-376)||(6051383-6051535)
chr1 (260-370)||(45271027-45271137)
chr1 (257-439)||(48434867-48435049)
chr1 (245-352)||(7395949-7396056)
chr1 (239-376)||(35541814-35541951)
chr1 (326-475)||(38070513-38070661)
chr1 (273-352)||(26721437-26721516)
chr1 (257-350)||(33259943-33260036)
chr1 (257-350)||(33280102-33280195)
chr1 (284-352)||(17708862-17708930)
chr1 (224-364)||(47622285-47622425)
chr1 (299-438)||(32642589-32642728)
chr1 (305-364)||(20796452-20796511)
chr1 (305-375)||(19042904-19042974)
chr1 (11-173)||(23227432-23227594)
chr1 (302-364)||(39431078-39431140)
chr1 (302-364)||(49264251-49264313)
chr1 (402-504)||(52692123-52692225)
chr1 (307-352)||(3074548-3074593)
chr1 (279-351)||(5283140-5283212)
chr1 (302-374)||(42475184-42475256)
chr1 (294-352)||(10710482-10710539)
chr1 (257-351)||(22191023-22191117)
chr1 (224-342)||(51052695-51052813)
chr1 (90-351)||(21409046-21409307)
chr1 (289-352)||(43943750-43943813)
chr1 (302-376)||(2654889-2654963)
chr1 (446-504)||(7396152-7396210)
chr1 (317-369)||(16586500-16586552)
chr1 (90-182)||(22190856-22190948)
chr1 (273-333)||(27889548-27889608)
chr1 (305-345)||(30650308-30650348)
[»] chr6 (38 HSPs)
chr6 (1-508)||(14843122-14843629)
chr6 (50-471)||(25350907-25351329)
chr6 (95-504)||(26514376-26514786)
chr6 (113-508)||(14686105-14686500)
chr6 (46-490)||(32186349-32186793)
chr6 (233-459)||(19350641-19350867)
chr6 (272-491)||(502788-503007)
chr6 (219-490)||(33640583-33640854)
chr6 (224-351)||(26206138-26206265)
chr6 (251-351)||(15674637-15674737)
chr6 (243-376)||(10362927-10363059)
chr6 (251-507)||(13563165-13563427)
chr6 (385-490)||(29976377-29976482)
chr6 (219-352)||(21629325-21629458)
chr6 (284-352)||(649341-649409)
chr6 (284-352)||(11060130-11060198)
chr6 (240-364)||(13938510-13938634)
chr6 (305-376)||(2554385-2554456)
chr6 (302-364)||(13086335-13086397)
chr6 (267-376)||(17576968-17577077)
chr6 (260-352)||(17605578-17605670)
chr6 (305-414)||(18681863-18681972)
chr6 (305-414)||(24766703-24766812)
chr6 (306-508)||(1104237-1104439)
chr6 (251-352)||(2923634-2923735)
chr6 (251-364)||(21549639-21549752)
chr6 (257-369)||(19616120-19616232)
chr6 (303-451)||(17712882-17713030)
chr6 (306-352)||(17078357-17078403)
chr6 (303-367)||(33753458-33753522)
chr6 (266-369)||(1307917-1308020)
chr6 (317-364)||(11469365-11469412)
chr6 (299-346)||(32198012-32198059)
chr6 (14-72)||(10363230-10363288)
chr6 (318-364)||(14372293-14372339)
chr6 (275-345)||(24573864-24573934)
chr6 (303-376)||(12673406-12673479)
chr6 (218-343)||(29824777-29824902)
[»] chr3 (50 HSPs)
chr3 (1-508)||(31675579-31676086)
chr3 (1-508)||(31920337-31920843)
chr3 (90-508)||(34830041-34830459)
chr3 (104-508)||(40512812-40513216)
chr3 (50-409)||(53941993-53942352)
chr3 (117-459)||(19875940-19876282)
chr3 (131-504)||(55367262-55367634)
chr3 (224-465)||(14309263-14309511)
chr3 (224-376)||(2365058-2365210)
chr3 (224-351)||(6175685-6175812)
chr3 (225-364)||(962372-962511)
chr3 (243-372)||(17270969-17271098)
chr3 (219-364)||(48569226-48569371)
chr3 (224-376)||(34332023-34332175)
chr3 (224-420)||(19919437-19919633)
chr3 (257-411)||(43120915-43121069)
chr3 (257-364)||(23819357-23819464)
chr3 (239-369)||(8130760-8130890)
chr3 (305-375)||(52907331-52907401)
chr3 (269-370)||(16672274-16672375)
chr3 (305-454)||(18381752-18381899)
chr3 (251-364)||(24925920-24926033)
chr3 (272-364)||(46907926-46908018)
chr3 (260-348)||(52250369-52250457)
chr3 (273-375)||(50545024-50545126)
chr3 (309-411)||(36731638-36731740)
chr3 (305-364)||(16179732-16179791)
chr3 (302-364)||(14863742-14863804)
chr3 (302-364)||(21739774-21739836)
chr3 (287-373)||(30166594-30166680)
chr3 (257-351)||(44888709-44888803)
chr3 (219-501)||(12341458-12341740)
chr3 (307-364)||(15481049-15481106)
chr3 (307-364)||(17077588-17077645)
chr3 (251-364)||(42674673-42674786)
chr3 (260-348)||(7164296-7164384)
chr3 (445-508)||(30166773-30166836)
chr3 (284-370)||(6825598-6825684)
chr3 (275-345)||(8948278-8948348)
chr3 (393-471)||(20356787-20356865)
chr3 (302-363)||(10868437-10868498)
chr3 (303-364)||(36709701-36709762)
chr3 (305-370)||(48930512-48930577)
chr3 (276-364)||(19891469-19891557)
chr3 (307-508)||(22734014-22734215)
chr3 (90-182)||(44888878-44888970)
chr3 (288-352)||(47538071-47538135)
chr3 (275-373)||(17914449-17914547)
chr3 (32-85)||(30166339-30166392)
chr3 (305-345)||(20797918-20797958)
[»] chr5 (46 HSPs)
chr5 (120-494)||(380563-380937)
chr5 (245-508)||(42259928-42260193)
chr5 (245-375)||(22094478-22094608)
chr5 (306-504)||(26261608-26261805)
chr5 (224-376)||(42514500-42514652)
chr5 (226-414)||(28534886-28535074)
chr5 (260-371)||(21084666-21084777)
chr5 (224-376)||(23239163-23239315)
chr5 (224-420)||(30731522-30731718)
chr5 (224-375)||(30509231-30509382)
chr5 (224-375)||(30549574-30549725)
chr5 (225-504)||(33170310-33170589)
chr5 (239-369)||(36256562-36256692)
chr5 (251-364)||(588299-588412)
chr5 (273-411)||(20207977-20208115)
chr5 (251-364)||(35121923-35122036)
chr5 (261-402)||(35983036-35983177)
chr5 (273-348)||(6050048-6050123)
chr5 (305-376)||(8299471-8299542)
chr5 (305-364)||(27796276-27796335)
chr5 (275-370)||(41590875-41590970)
chr5 (260-370)||(4297553-4297663)
chr5 (307-501)||(10780856-10781050)
chr5 (219-352)||(25856642-25856775)
chr5 (251-346)||(10486137-10486232)
chr5 (294-373)||(15861963-15862042)
chr5 (266-352)||(19838368-19838455)
chr5 (278-441)||(22174258-22174419)
chr5 (391-486)||(35637805-35637899)
chr5 (302-364)||(19506790-19506852)
chr5 (294-352)||(29572148-29572206)
chr5 (294-352)||(29573525-29573583)
chr5 (294-352)||(29574902-29574960)
chr5 (294-352)||(29576279-29576337)
chr5 (294-352)||(29577656-29577714)
chr5 (294-352)||(29579033-29579091)
chr5 (257-439)||(3580834-3581016)
chr5 (307-376)||(22437998-22438067)
chr5 (303-364)||(38358259-38358320)
chr5 (445-501)||(10486348-10486404)
chr5 (219-342)||(33385176-33385299)
chr5 (310-352)||(6885717-6885759)
chr5 (432-504)||(26262292-26262364)
chr5 (224-364)||(31865089-31865229)
chr5 (477-508)||(476861-476892)
chr5 (389-504)||(34481600-34481715)
[»] scaffold0043 (1 HSPs)
scaffold0043 (337-508)||(33930-34101)
[»] chr8 (41 HSPs)
chr8 (50-504)||(25193740-25194194)
chr8 (31-508)||(6245730-6246208)
chr8 (275-458)||(15539755-15539938)
chr8 (113-504)||(29721008-29721398)
chr8 (272-504)||(12341219-12341451)
chr8 (317-504)||(36025173-36025360)
chr8 (273-507)||(7453001-7453235)
chr8 (257-490)||(4987306-4987539)
chr8 (326-496)||(37165431-37165601)
chr8 (226-414)||(9923343-9923531)
chr8 (245-351)||(16375332-16375438)
chr8 (289-375)||(36157935-36158021)
chr8 (224-376)||(7925166-7925318)
chr8 (260-370)||(36493167-36493277)
chr8 (279-376)||(4991959-4992056)
chr8 (272-376)||(12332628-12332732)
chr8 (239-376)||(8300583-8300720)
chr8 (306-508)||(18187794-18187995)
chr8 (251-364)||(23942879-23942992)
chr8 (224-414)||(26774455-26774645)
chr8 (284-352)||(17659645-17659713)
chr8 (305-364)||(13878776-13878835)
chr8 (224-375)||(32267335-32267486)
chr8 (302-364)||(24794512-24794574)
chr8 (307-364)||(6901729-6901786)
chr8 (257-439)||(41691001-41691183)
chr8 (260-352)||(17700284-17700376)
chr8 (224-376)||(41664576-41664728)
chr8 (273-352)||(45255097-45255176)
chr8 (302-364)||(11393617-11393679)
chr8 (219-376)||(20825079-20825237)
chr8 (307-364)||(43612476-43612533)
chr8 (302-376)||(43775057-43775131)
chr8 (307-352)||(28992510-28992555)
chr8 (307-508)||(5585337-5585538)
chr8 (317-373)||(8445596-8445652)
chr8 (433-465)||(16048333-16048365)
chr8 (303-351)||(28453757-28453805)
chr8 (306-352)||(10530464-10530510)
chr8 (302-364)||(43249090-43249152)
chr8 (307-364)||(12135015-12135072)
[»] chr4 (47 HSPs)
chr4 (268-508)||(43516000-43516240)
chr4 (110-508)||(2072188-2072586)
chr4 (31-442)||(9691137-9691548)
chr4 (245-504)||(19115088-19115347)
chr4 (245-491)||(8935739-8935985)
chr4 (257-459)||(29553042-29553244)
chr4 (224-351)||(55299426-55299553)
chr4 (224-351)||(23872685-23872812)
chr4 (245-462)||(19648389-19648606)
chr4 (224-376)||(23641799-23641951)
chr4 (122-337)||(15342639-15342854)
chr4 (245-351)||(20675840-20675946)
chr4 (224-376)||(1827748-1827900)
chr4 (224-376)||(23647457-23647609)
chr4 (257-364)||(34976733-34976840)
chr4 (243-370)||(38296491-38296618)
chr4 (224-376)||(47419584-47419736)
chr4 (257-364)||(19733229-19733336)
chr4 (251-364)||(26694720-26694833)
chr4 (224-376)||(19756047-19756199)
chr4 (224-376)||(19783607-19783759)
chr4 (284-352)||(42779054-42779122)
chr4 (273-352)||(10562581-10562660)
chr4 (266-369)||(19308837-19308940)
chr4 (305-364)||(48312886-48312945)
chr4 (305-364)||(54482449-54482508)
chr4 (224-503)||(2365659-2365937)
chr4 (302-364)||(42952817-42952879)
chr4 (287-508)||(7662579-7662800)
chr4 (226-335)||(55464091-55464200)
chr4 (317-376)||(15741000-15741059)
chr4 (239-369)||(40688867-40688998)
chr4 (251-345)||(3129211-3129305)
chr4 (239-369)||(19162392-19162522)
chr4 (306-352)||(20396386-20396432)
chr4 (284-369)||(19837922-19838007)
chr4 (275-336)||(29133683-29133744)
chr4 (276-376)||(29328041-29328141)
chr4 (445-504)||(3129418-3129477)
chr4 (305-364)||(55724996-55725055)
chr4 (257-412)||(7447505-7447660)
chr4 (316-371)||(17826062-17826117)
chr4 (303-345)||(20509258-20509300)
chr4 (302-376)||(45636290-45636364)
chr4 (264-369)||(14538269-14538374)
chr4 (433-465)||(13158220-13158252)
chr4 (284-352)||(53486197-53486265)
[»] chr7 (49 HSPs)
chr7 (233-508)||(27218339-27218614)
chr7 (32-491)||(33820575-33821034)
chr7 (259-504)||(19544647-19544890)
chr7 (219-490)||(45993241-45993513)
chr7 (319-494)||(34104139-34104314)
chr7 (226-414)||(17721377-17721565)
chr7 (224-376)||(4937336-4937488)
chr7 (384-504)||(39658755-39658875)
chr7 (224-351)||(13440863-13440990)
chr7 (260-376)||(41805003-41805119)
chr7 (305-376)||(11276537-11276608)
chr7 (305-376)||(29968754-29968825)
chr7 (270-376)||(25018556-25018662)
chr7 (239-369)||(45164770-45164900)
chr7 (19-300)||(23887829-23888110)
chr7 (307-375)||(41340330-41340398)
chr7 (287-508)||(46626470-46626691)
chr7 (302-364)||(19735310-19735372)
chr7 (287-364)||(28173254-28173331)
chr7 (284-352)||(34232505-34232573)
chr7 (305-364)||(23054259-23054318)
chr7 (305-364)||(36227440-36227499)
chr7 (257-351)||(17056334-17056428)
chr7 (303-352)||(4078081-4078130)
chr7 (266-420)||(4164775-4164929)
chr7 (266-420)||(34207066-34207220)
chr7 (444-508)||(15653136-15653199)
chr7 (305-345)||(34791964-34792004)
chr7 (317-364)||(31423386-31423433)
chr7 (305-376)||(45871543-45871614)
chr7 (307-352)||(2820012-2820057)
chr7 (276-369)||(6335652-6335745)
chr7 (306-375)||(18671952-18672021)
chr7 (303-364)||(18768200-18768261)
chr7 (384-465)||(20918650-20918731)
chr7 (257-346)||(22818958-22819047)
chr7 (95-300)||(23899005-23899210)
chr7 (307-352)||(29917024-29917069)
chr7 (307-352)||(39930887-39930932)
chr7 (431-508)||(39931011-39931088)
chr7 (444-504)||(23887735-23887795)
chr7 (444-504)||(23898911-23898971)
chr7 (20-75)||(28172987-28173042)
chr7 (303-374)||(28740222-28740293)
chr7 (311-376)||(4344630-4344695)
chr7 (284-369)||(45460099-45460184)
chr7 (90-182)||(17056503-17056595)
chr7 (317-373)||(18317138-18317194)
chr7 (305-369)||(37942143-37942207)
[»] chr2 (36 HSPs)
chr2 (113-508)||(33583525-33583919)
chr2 (46-490)||(6824077-6824519)
chr2 (237-465)||(11197042-11197271)
chr2 (245-351)||(13551387-13551493)
chr2 (228-504)||(15018329-15018605)
chr2 (270-376)||(26146995-26147101)
chr2 (245-352)||(25380622-25380730)
chr2 (287-508)||(45422168-45422389)
chr2 (257-376)||(34357588-34357707)
chr2 (239-369)||(13416473-13416603)
chr2 (251-364)||(35488630-35488743)
chr2 (239-369)||(2207045-2207175)
chr2 (56-178)||(27335671-27335793)
chr2 (270-376)||(43311039-43311145)
chr2 (254-363)||(22724677-22724786)
chr2 (224-364)||(28399758-28399898)
chr2 (305-364)||(12646342-12646401)
chr2 (303-369)||(3153106-3153172)
chr2 (251-333)||(4222175-4222257)
chr2 (306-364)||(8065551-8065609)
chr2 (275-348)||(10689346-10689419)
chr2 (219-352)||(33515396-33515529)
chr2 (257-345)||(20946830-20946918)
chr2 (245-364)||(28253521-28253640)
chr2 (311-370)||(43722321-43722380)
chr2 (239-369)||(6724855-6724985)
chr2 (302-364)||(11233775-11233837)
chr2 (239-369)||(44028436-44028566)
chr2 (384-490)||(44028588-44028694)
chr2 (273-333)||(2282605-2282665)
chr2 (257-345)||(10289307-10289395)
chr2 (445-508)||(11233919-11233982)
chr2 (305-352)||(14440548-14440595)
chr2 (266-376)||(12605693-12605803)
chr2 (305-351)||(18669506-18669552)
chr2 (32-85)||(45422591-45422644)
[»] scaffold0048 (1 HSPs)
scaffold0048 (134-490)||(63418-63773)
[»] scaffold0189 (1 HSPs)
scaffold0189 (225-374)||(6873-7022)
[»] scaffold0034 (1 HSPs)
scaffold0034 (224-376)||(105051-105203)
[»] scaffold0026 (1 HSPs)
scaffold0026 (156-364)||(67872-68080)
[»] scaffold0016 (1 HSPs)
scaffold0016 (270-376)||(28554-28660)
[»] scaffold0179 (2 HSPs)
scaffold0179 (273-350)||(8338-8415)
scaffold0179 (273-350)||(13272-13349)
[»] scaffold0472 (1 HSPs)
scaffold0472 (305-376)||(4032-4103)
[»] scaffold0002 (3 HSPs)
scaffold0002 (444-504)||(327563-327623)
scaffold0002 (444-504)||(312109-312169)
scaffold0002 (251-346)||(311908-312003)
[»] scaffold1350 (1 HSPs)
scaffold1350 (124-504)||(196-576)
[»] scaffold0418 (1 HSPs)
scaffold0418 (287-508)||(8252-8473)
[»] scaffold0131 (3 HSPs)
scaffold0131 (384-504)||(3924-4044)
scaffold0131 (287-346)||(3819-3878)
scaffold0131 (32-84)||(3564-3616)
[»] scaffold0029 (2 HSPs)
scaffold0029 (444-504)||(134282-134342)
scaffold0029 (251-346)||(134080-134175)
[»] scaffold0007 (1 HSPs)
scaffold0007 (294-352)||(182919-182977)
[»] scaffold0061 (1 HSPs)
scaffold0061 (270-371)||(55450-55551)
[»] scaffold0017 (1 HSPs)
scaffold0017 (270-371)||(143082-143183)
[»] scaffold0112 (1 HSPs)
scaffold0112 (305-364)||(14950-15009)
[»] scaffold0094 (1 HSPs)
scaffold0094 (303-351)||(26105-26153)
[»] scaffold1809 (1 HSPs)
scaffold1809 (309-352)||(1093-1136)


Alignment Details
Target: chr1 (Bit Score: 455; Significance: 0; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 455; E-Value: 0
Query Start/End: Original strand, 1 - 508
Target Start/End: Original strand, 3544086 - 3544593
Alignment:
Q  1 tttgagggccgtgttgattttgtttgaggggatgtctggtttgcgagtgaattttcataagagtatgttggttggaattaatattcagaattcatggttg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3544086 tttgagggccgtgttgattttgtttgaggggatgtctggtttgcgagtgaattttcataagagtatgttggttggaattaatattcagaattcatggttg 3544185  T
Q  101 aatgaagcagcctctattttaaattgcaaagttggtaaagttccgtttctgtatctgggtctttctattggtggtgatccgaagaggttagccttttggg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3544186 aatgaagcagcctctattttaaattgcaaagttggtaaagttccgtttctgtatctgggtctttctattggtggtgatccgaagaggttagccttttggg 3544285  T
Q  201 aacctgtgttgaagactgtaaagtctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctc 300  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||    
T  3544286 aacctgtgttgaagactataaagtctagattatcggggtggcaaagtcgctctctctcttttgggggtcggttgattcttctcaagactgtcttgacctc 3544385  T
Q  301 attgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggat 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||    
T  3544386 attgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaatttttttggggagggagtgaggat 3544485  T
Q  401 aacaggaaaatttcctgggtcgcttggaactctgtttgtttacgaaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgt 500  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||    
T  3544486 aacaggaaaatttcctgggtcgcttggaactctgtttgtttacaaaaggagtatggagggttgggagtgagatagctgagggagtttaattgtgttttgt 3544585  T
Q  501 taggtaaa 508  Q
    ||||||||    
T  3544586 taggtaaa 3544593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 156 - 508
Target Start/End: Original strand, 1247726 - 1248078
Alignment:
Q  156 tgggtctttctattggtggtgatccgaagaggttagccttttgggaacctgtgttgaagactgtaaagtctagattatcggggtggcaaagtcgctttct 255  Q
    |||||||||||||||||||||||| |   ||||||||||||||||||||||||||||| ||  | ||||||||| |||||||||||||||||||||||||    
T  1247726 tgggtctttctattggtggtgatctgcgaaggttagccttttgggaacctgtgttgaaaaccattaagtctagactatcggggtggcaaagtcgctttct 1247825  T
Q  256 ctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtc 355  Q
    ||||||||| |  |||||||||||||||||||||||| ||||||| || | ||||||||| |||||||| ||||||||| |||| |||||||||||||||    
T  1247826 ctcttttggagcccggttggttcttctcaagtctgtcctgacctcgttacatgtctatgctctttcctttttcaaagcttcgtcgggtataatctctgtc 1247925  T
Q  356 attgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaatttcctgggtcgcttggaactctgtttgtttacgaaaggagtatg 455  Q
    |||||||||||||||||||||       |||||||| |||||||||||| ||||||||| ||| ||||||||| |||||||||||||| |||||||||||    
T  1247926 attgaatctatttttaataaaaaaatttggggagggcgtgaggataacaagaaaatttcatggatcgcttggagctctgtttgtttacaaaaggagtatg 1248025  T
Q  456 gagggttgggagtgagacagctgagggagtttaatagtgctttgttaggtaaa 508  Q
    | ||||| || ||||| ||| | ||||||||||||||||||||||||||||||    
T  1248026 gggggttaggggtgaggcagttaagggagtttaatagtgctttgttaggtaaa 1248078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 11 - 504
Target Start/End: Complemental strand, 20988299 - 20987807
Alignment:
Q  11 gtgttgattttgtttgaggggatgtctggtttgcgagtgaattttcataagagtatgttggttggaattaatattcagaattcatggttgaatgaagcag 110  Q
    ||||||| |||||||| ||  ||||||||||||   || |||||| |||| ||||||||| ||||  ||||| |   ||| || ||||||||||| ||||    
T  20988299 gtgttgactttgtttgcggatatgtctggtttgaaggttaattttaataaaagtatgttgtttggtcttaatgtatcgaagtcgtggttgaatgaggcag 20988200  T
Q  111 cctctattttaaattgcaaagttggtaaagttccgtttctgtatctgggtctttctattggtggtgatccgaagaggttagccttttgggaacctgtgtt 210  Q
    | || || |||||||| |||||  ||||||| || ||| ||||||||||| | |||||||||||| ||||||   ||||||| || ||||| | | || |    
T  20988199 cgtcaatcttaaattgtaaagtgcgtaaagtgccttttttgtatctgggtttgtctattggtggtaatccgagccggttagcattctgggatcatatggt 20988100  T
Q  211 gaagactgtaaagtctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtc 310  Q
    | | | | ||||||||||||| ||||||||| ||||| | |||||||| || |||| |||||||||||||||||||| |||| |||||||  | ||||||    
T  20988099 gcatattataaagtctagattgtcggggtggaaaagttgttttctctccttcgggg-tcggttggttcttctcaagtgtgtcctgacctcgctacctgtc 20988001  T
Q  311 tatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaa 410  Q
    ||||| |||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||       |||||||||||||||||||||||||||    
T  20988000 tatgctctttccttcttcaaagctccgtcatgtatcatctctatcattgaatctatttttaataaatttttttggggagggagtgaggataacaggaaaa 20987901  T
Q  411 tttcctgggtcgcttggaactctgtttgtttacgaaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgttagg 504  Q
    |||||||||| ||||||| |||| | |||||||| ||||||| ||| ||| |||| || || ||| ||||||| ||||||| ||| ||||||||    
T  20987900 tttcctgggttgcttggagctctatctgtttacgtaaggagtttggtgggctgggggttaggcagttgagggaatttaatactgcgttgttagg 20987807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 31 - 506
Target Start/End: Complemental strand, 5809706 - 5809231
Alignment:
Q  31 gatgtctggtttgcgagtgaattttcataagagtatgttggttggaattaatattcagaattcatggttgaatgaagcagcctctattttaaattgcaaa 130  Q
    |||||| ||||||  ||| |||||  |||| || ||||||||||| || |||||   | ||||||||||  |||| || || || ||||||||||| ||     
T  5809706 gatgtcaggtttgaaagtaaatttcaataaaagcatgttggttggtataaatatcgcggattcatggttctatgaggcggcatccattttaaattgtaag 5809607  T
Q  131 gttggtaaagttccgtttctgtatctgggtctttctattggtggtgatccgaagaggttagccttttgggaacctgtgttgaagactgtaaagtctagat 230  Q
    || ||||| ||||||||| ||||||||||  | || ||||| ||||| | |  ||||||||| || |||||||||||||| ||| |  | ||  ||||||    
T  5809606 gtgggtaaggttccgtttatgtatctgggcttatcgattggcggtgacctgcggaggttagcattctgggaacctgtgttaaaggccattaaaactagat 5809507  T
Q  231 tatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaa 330  Q
    | || |||||||||||| | ||| |||||| |||||||| |||||| ||||| ||||||||| ||||| | || ||||||||||| ||||||||||||||    
T  5809506 tgtcagggtggcaaagttgttttttctcttatgggggtcagttggtccttcttaagtctgtcctgaccgcgttacctgtctatgctctttccttcttcaa 5809407  T
Q  331 agctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaatttcctgggtcgcttggaac 430  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||       ||||||||| ||||||||| ||||||||||||||| |  |||||| |    
T  5809406 agctccgtcaggtataatctttgtcattaaatctatttttaataaaaaaaattggggagggaatgaggataataggaaaatttcctggttttcttggagc 5809307  T
Q  431 tctgtttgtttacgaaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgttaggta 506  Q
    | |||||||||||| ||||||||| || ||||||| |||||  || ||  ||| |||||||| |||||||||||||    
T  5809306 tttgtttgtttacgtaaggagtatagacggttgggggtgaggaagttgcaggaatttaatagcgctttgttaggta 5809231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 46 - 508
Target Start/End: Original strand, 19014012 - 19014476
Alignment:
Q  46 agtgaattttcataagagtatgttggttggaattaatattcagaattcatggttgaatgaagcagcctctattttaaattgcaaagttggtaaagttccg 145  Q
    ||||||||||||||||||| |  ||||||| |||||||||  | |||| ||||||| ||| ||||| ||||||||||| || ||||| ||| || |||||    
T  19014012 agtgaattttcataagagtttactggttggtattaatattggggattcttggttgactgaggcagcatctattttaaactgtaaagtgggtgaaattccg 19014111  T
Q  146 tttctgtatctgggtctttctattggtggtgatccgaagaggttagccttttgggaacctgtgttgaagactgtaaagtctagattatc-ggggtggcaa 244  Q
    ||  ||||||| ||||| || ||||||||||||||    |||||||  |||||||||||| || |||| ||| | ||  ||||| | || |||||||||     
T  19014112 ttcttgtatcttggtctctcgattggtggtgatcctcgaaggttagatttttgggaacctatgatgaatactattaaaactagactgtcgggggtggcat 19014211  T
Q  245 agtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggta 344  Q
    |||| |||||| ||||||||||| ||||||||  ||||||||| |||||||||||   | | ||||||||| ||||||||||||||||||| ||||| ||    
T  19014212 agtcactttctatcttttgggggccggttggtctttctcaagtttgtcttgacctggcttcttgtctatgctctttccttcttcaaagctctgtcagata 19014311  T
Q  345 taatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaatttcctgggtcgcttggaactctgtttg-tttac 443  Q
    ||||||||  ||||||||||||||||||  ||       ||||||||||||||||||||| |||||||| |||| | ||||||| |||| |||| |||||    
T  19014312 taatctcttccattgaatctatttttaaacaatttttttggggagggagtgaggataacatgaaaatttactggattgcttggagctctatttgttttac 19014411  T
Q  444 gaaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgttaggtaaa 508  Q
      ||||||  ||||  |||||| || |||||| ||||||||||||||   |||||| ||||||||    
T  19014412 cgaaggagggtggaatgttgggggttagacagttgagggagtttaatttagctttgctaggtaaa 19014476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 197 - 508
Target Start/End: Original strand, 13867021 - 13867325
Alignment:
Q  197 tgggaacctgtgttgaagactgtaaagtctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttga 296  Q
    ||||||||||||||||| ||  | || |||||| | | |||||| |||||||| |||||||||||||| ||||||||||| ||||| ||||||||| |||    
T  13867021 tgggaacctgtgttgaaaacaattaaatctagactgttggggtgacaaagtcgttttctctcttttggaggtcggttggtccttcttaagtctgtcctga 13867120  T
Q  297 cctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtga 396  Q
    |  |||| ||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||          ||||||||||||    
T  13867121 ctgcattacctgtatatgctctttccttcttcaaggctccgtcaggtataatctctgtcattgaatctatttttaatattttttttttgggagggagtga 13867220  T
Q  397 ggataacaggaaaatttcctgggtcgcttggaactctgtttgtttacgaaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgct 496  Q
    |||||||||||||||||||||||| |||| || ||| ||||| ||||       ||||||||| ||||| |||||  || ||  ||| ||||||||||||    
T  13867221 ggataacaggaaaatttcctgggttgcttagagctcggtttgcttac-------gtatggaggtttgggggtgaggaagttgcaggaatttaatagtgct 13867313  T
Q  497 ttgttaggtaaa 508  Q
    ||||||||||||    
T  13867314 ttgttaggtaaa 13867325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 224 - 459
Target Start/End: Complemental strand, 28358823 - 28358586
Alignment:
Q  224 tctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttcct 323  Q
    |||||||||||||||||||||||||| ||||| || || |||||||| ||| ||||||| |||| |||| | || ||  | | ||||||||| |||||||    
T  28358823 tctagattatcggggtggcaaagtcgttttctatccttcgggggtcgcttgattcttcttaagtttgtcctaacatcgcttcatgtctatgctctttcct 28358724  T
Q  324 tcttcaaagctccgtcaggtataatctctgtcattgaatctatttt--taataaannnnnnnggggagggagtgaggataacaggaaaatttcctgggtc 421  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||   || |||       |||||||||||||||||||||| ||||||| |||| |     
T  28358723 tcttcaaagctccgtcaggtataatctctctcattgaatctattttaaaaaaaaaaaatattggggagggagtgaggataacagaaaaattttctggatt 28358624  T
Q  422 gcttggaactctgtttgtttacgaaaggagtatggagg 459  Q
    ||||||| |||||| ||||||   ||||||| ||||||    
T  28358623 gcttggagctctgtgtgtttaaataaggagtttggagg 28358586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 348 - 508
Target Start/End: Complemental strand, 45796083 - 45795923
Alignment:
Q  348 tctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaatttcctgggtcgcttggaactctgtttgtttacgaaa 447  Q
    |||||||||||||||||||||||||||||        ||||||||||||||||||||||||| |||  ||||| ||||||| ||||||||||||||| ||    
T  45796083 tctctgtcattgaatctatttttaataaatttttttagggagggagtgaggataacaggaaatttttttgggttgcttggagctctgtttgtttacgtaa 45795984  T
Q  448 ggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgttaggtaaa 508  Q
    |||||||||||||||||| |||||  || ||  ||| ||||||||||||||||||||||||    
T  45795983 ggagtatggagggttgggggtgaggaagttgcaggaatttaatagtgctttgttaggtaaa 45795923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 224 - 351
Target Start/End: Complemental strand, 5498018 - 5497891
Alignment:
Q  224 tctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttcct 323  Q
    |||||| | ||||| ||| | ||||| ||||| |||||||| ||||| |||||||||||||| |||||| ||||||| ||||||||||||||  ||||||    
T  5498018 tctagactgtcgggttggaatagtcggtttctatcttttggtggtcgcttggttcttctcaaatctgtcctgacctctttgcctgtctatgcaatttcct 5497919  T
Q  324 tcttcaaagctccgtcaggtataatctc 351  Q
    ||||||||||||| ||||||||||||||    
T  5497918 tcttcaaagctccatcaggtataatctc 5497891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 224 - 351
Target Start/End: Original strand, 32352520 - 32352647
Alignment:
Q  224 tctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttcct 323  Q
    |||||| | ||||| ||| | ||||| |||||||||||||| ||||| |||||||| ||||| ||||||||||||||  ||||||||||||| |||||||    
T  32352520 tctagactgtcgggttggaatagtcggtttctctcttttggtggtcgcttggttctactcaaatctgtcttgacctctctgcctgtctatgcactttcct 32352619  T
Q  324 tcttcaaagctccgtcaggtataatctc 351  Q
    |||||||||||||  |||||||||||||    
T  32352620 tcttcaaagctccagcaggtataatctc 32352647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 224 - 351
Target Start/End: Original strand, 48072634 - 48072761
Alignment:
Q  224 tctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttcct 323  Q
    |||||| | ||||| ||| | ||||| |||||||||||||| ||||| |||||||| ||||| ||||||||||||||  ||||||||||||| |||||||    
T  48072634 tctagactgtcgggttggaatagtcggtttctctcttttggtggtcgcttggttctactcaaatctgtcttgacctctctgcctgtctatgcgctttcct 48072733  T
Q  324 tcttcaaagctccgtcaggtataatctc 351  Q
    |||||||||||||  |||||||||||||    
T  48072734 tcttcaaagctccagcaggtataatctc 48072761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 245 - 491
Target Start/End: Original strand, 25504221 - 25504469
Alignment:
Q  245 agtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggta 344  Q
    ||||| || ||||||||||| || || |||||||||||||| ||||| ||||||||  | ||||||||||| ||||| ||||||||||||||||||||||    
T  25504221 agtcgtttcctctcttttggtggccgtttggttcttctcaaatctgtgttgacctctcttcctgtctatgctctttctttcttcaaagctccgtcaggta 25504320  T
Q  345 taatctctgtcattgaatctatttttaataa--annnnnnnggggagggagtgaggataacaggaaaatttcctgggtcgcttggaactctgtttgttta 442  Q
    ||||||||  | |||||||| | ||||||||          ||||  ||||||||||| | |||||||| || ||| | | ||||| |||||||||| |     
T  25504321 taatctctacccttgaatctttatttaataattttttttttggggtaggagtgaggatcataggaaaatatcttggataggttggagctctgtttgtctc 25504420  T
Q  443 cgaaaggagtatggagggttgggagtgagacagctgagggagtttaata 491  Q
    |  ||||||| ||||||||| || || |||||| ||| |||||||||||    
T  25504421 cagaaggagtttggagggttaggggttagacagttgatggagtttaata 25504469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 276 - 504
Target Start/End: Original strand, 40562818 - 40563046
Alignment:
Q  276 ttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataa 375  Q
    ||||||| |||| |||| |||||||  | ||||||||||| ||||| || |||||||||| ||||||||| || ||| ||||||||||||||||||| ||    
T  40562818 ttcttctaaagtttgtcctgacctcggttcctgtctatgcgctttcttttttcaaagctctgtcaggtatcatttctctcattgaatctatttttaacaa 40562917  T
Q  376 annnnnnnggggagggagtgaggataacaggaaaatttcctgggtcgcttggaactctgtttgtttacgaaaggagtatggagggttgggagtgagacag 475  Q
    |       ||| |||| |||||| ||||||||||||||||||  | ||||||| |||| ||||| | | ||||||| |||||||||| || |||||  ||    
T  40562918 aattttttgggcagggtgtgaggttaacaggaaaatttcctgaattgcttggagctctatttgtcttcaaaaggaggatggagggttaggggtgaggtag 40563017  T
Q  476 ctgagggagtttaatagtgctttgttagg 504  Q
     ||| ||| || |||| ||| ||||||||    
T  40563018 ttgaaggaattcaatattgccttgttagg 40563046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 224 - 376
Target Start/End: Complemental strand, 6051535 - 6051383
Alignment:
Q  224 tctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttcct 323  Q
    |||||||| || || ||||||||||| || || ||||| || ||||| ||| ||||||| ||||||||| ||||  |  | ||||||||||| |||||||    
T  6051535 tctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattcttctaaagtctgtcctgactgctctacctgtctatgcactttcct 6051436  T
Q  324 tcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaa 376  Q
    |||||||||||||| ||||||||||||||  |||||||||| | |||||||||    
T  6051435 tcttcaaagctccgacaggtataatctcttccattgaatctttgtttaataaa 6051383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 260 - 370
Target Start/End: Complemental strand, 45271137 - 45271027
Alignment:
Q  260 tttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattg 359  Q
    ||||| || ||||||||||| || |||||||||||||||||  | ||||||||||| |||||||||||||| ||||||||||||||||| |||  | |||    
T  45271137 tttggtggccggttggttctccttaagtctgtcttgacctctcttcctgtctatgctctttccttcttcaaggctccgtcaggtataatttcttcccttg 45271038  T
Q  360 aatctattttt 370  Q
    | |||||||||    
T  45271037 attctattttt 45271027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 257 - 439
Target Start/End: Complemental strand, 48435049 - 48434867
Alignment:
Q  257 tcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtca 356  Q
    |||| |||||| || ||| ||||| | || |||||| || | |||||||||||||| || |||||||| |||||||||||  ||||||||||||||  ||    
T  48435049 tcttatgggggccgcttgattcttttaaaatctgtcctgtcttcattgcctgtctacgctctttcctttttcaaagctcccgcaggtataatctcttcca 48434950  T
Q  357 ttgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaatttcctgggtcgcttggaactctgtttgt 439  Q
    ||||||||||| ||| |||        |||| ||||||||||||| |||||||||| | ||||| | |||||||||| |||||    
T  48434949 ttgaatctattcttattaattttttttggggtgggagtgaggataccaggaaaattgcgtgggttgattggaactctatttgt 48434867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 245 - 352
Target Start/End: Original strand, 7395949 - 7396056
Alignment:
Q  245 agtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggta 344  Q
    ||||| |||||||| ||||| || || |||||| |  | ||||||||||||||||| ||| |||||||||  |||||||||||||||||||| |||||||    
T  7395949 agtcgttttctctcctttggcggccgtttggttttgttaaagtctgtcttgacctctttgtctgtctatgatctttccttcttcaaagctccatcaggta 7396048  T
Q  345 taatctct 352  Q
    ||||||||    
T  7396049 taatctct 7396056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 239 - 376
Target Start/End: Complemental strand, 35541951 - 35541814
Alignment:
Q  239 tggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgt 338  Q
    ||||||||||| ||||| || || || || || ||| ||||||| ||||| ||| ||||  |  | ||||||||||| |||||||| |||||||||||||    
T  35541951 tggcaaagtcggtttctttccttaggtggccgtttgattcttctaaagtccgtcctgactgctctacctgtctatgcactttcctttttcaaagctccgt 35541852  T
Q  339 caggtataatctctgtcattgaatctatttttaataaa 376  Q
    ||||||||||||||  |||||||||| | |||||||||    
T  35541851 caggtataatctcttccattgaatctttgtttaataaa 35541814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 326 - 475
Target Start/End: Complemental strand, 38070661 - 38070513
Alignment:
Q  326 ttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaatttcctgggtcgctt 425  Q
    |||||||||||||||| ||||||||||  |||| | |||| ||| || |||        |||||||||||||||||||||||||||||| ||| ||||||    
T  38070661 ttcaaagctccgtcagatataatctcttccattaactctactttgaaaaaacaaaattagggagggagtgaggataacaggaaaatttcatggatcgctt 38070562  T
Q  426 ggaactctgtttgtttacgaaaggagtatggagggttgggagtgagacag 475  Q
    ||| | ||||||||||||| |||||  |||| ||||| || |||||||||    
T  38070561 ggagcactgtttgtttacgtaaggaagatgg-gggtttggggtgagacag 38070513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 273 - 352
Target Start/End: Complemental strand, 26721516 - 26721437
Alignment:
Q  273 tggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctct 352  Q
    |||||||| | |||| |||| |||||||  ||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  26721516 tggttcttttaaagtttgtcctgacctctctgcctgtctatgcgctttccttcttcaaagctccatcaggtataatctct 26721437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 257 - 350
Target Start/End: Original strand, 33259943 - 33260036
Alignment:
Q  257 tcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatct 350  Q
    |||||||| |||||  | |||||||| ||||||||||||| |||  | ||||||||||| |||||||||||||||||||| |||||||| ||||    
T  33259943 tcttttggtggtcgtcttgttcttcttaagtctgtcttgatctctctccctgtctatgctctttccttcttcaaagctccctcaggtatcatct 33260036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 257 - 350
Target Start/End: Original strand, 33280102 - 33280195
Alignment:
Q  257 tcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatct 350  Q
    |||||||| |||||  | |||||||| ||||||||||||| |||  | ||||||||||| |||||||||||||||||||| |||||||| ||||    
T  33280102 tcttttggtggtcgtcttgttcttcttaagtctgtcttgatctctctccctgtctatgctctttccttcttcaaagctccctcaggtatcatct 33280195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 352
Target Start/End: Complemental strand, 17708930 - 17708862
Alignment:
Q  284 aagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctct 352  Q
    ||||||||  |||||||  ||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  17708930 aagtctgttctgacctctctgcctgtctatgcactttccttcttcaaagctccatcaggtataatctct 17708862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 224 - 364
Target Start/End: Original strand, 47622285 - 47622425
Alignment:
Q  224 tctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttcct 323  Q
    |||||||| || || ||||  ||||| |||||||||||||| |||||  |  | ||||| ||||||||| ||||  |  | ||||||||||| |||||||    
T  47622285 tctagattgtctggttggcgtagtcggtttctctcttttggtggtcgcctaatccttctaaagtctgtcctgactgctcttcctgtctatgcactttcct 47622384  T
Q  324 tcttcaaagctccgtcaggtataatctctgtcattgaatct 364  Q
    | |||||||||||||||| ||||||||||  ||||||||||    
T  47622385 ttttcaaagctccgtcagatataatctcttccattgaatct 47622425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 299 - 438
Target Start/End: Complemental strand, 32642728 - 32642589
Alignment:
Q  299 tcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgagg 398  Q
    |||||||||||||| ||||| ||||| |||| ||||||  ||||||||||||||  ||| ||||||||||||| |||        |||||||| ||||||    
T  32642728 tcattgcctgtctacgccctatcctttttcagagctcccgcaggtataatctcttccatcgaatctatttttattaattttttttggggagggggtgagg 32642629  T
Q  399 ataacaggaaaatttcctgggtcgcttggaactctgtttg 438  Q
    |||| ||||||||| | ||||| | |||||| || |||||    
T  32642628 ataataggaaaattgcttgggttgattggaattccgtttg 32642589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 364
Target Start/End: Complemental strand, 20796511 - 20796452
Alignment:
Q  305 cctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatct 364  Q
    ||||||||||| ||||||||||| |||||||| |||||||||||||||  ||||||||||    
T  20796511 cctgtctatgctctttccttctttaaagctccatcaggtataatctcttccattgaatct 20796452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 305 - 375
Target Start/End: Complemental strand, 19042974 - 19042904
Alignment:
Q  305 cctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataa 375  Q
    ||||| ||||||||||||||||||  |||||| ||||||||||||||| | ||||||||| | ||||||||    
T  19042974 cctgtttatgccctttccttcttctgagctccatcaggtataatctcttttattgaatctttgtttaataa 19042904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 11 - 173
Target Start/End: Original strand, 23227432 - 23227594
Alignment:
Q  11 gtgttgattttgtttgaggggatgtctggtttgcgagtgaattttcataagagtatgttggttggaattaatattcagaattcatggttgaatgaagcag 110  Q
    |||||||||||||||| ||  ||||||||||||   |||||| || |||| || |||   ||||||||||||||   | | || ||||||||||| || |    
T  23227432 gtgttgattttgtttgcggaaatgtctggtttgaaggtgaatgttaataaaagcatgccagttggaattaatatagcggagtcgtggttgaatgaggcgg 23227531  T
Q  111 cctctattttaaattgcaaagttggtaaagttccgtttctgtatctgggtctttctattggtg 173  Q
    | || ||||||||||| ||||| ||||| || || ||| |||||||| |||| ||||||||||    
T  23227532 cgtcaattttaaattgtaaagtgggtaacgtcccttttgtgtatctgagtctctctattggtg 23227594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 302 - 364
Target Start/End: Complemental strand, 39431140 - 39431078
Alignment:
Q  302 ttgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatct 364  Q
    |||||||||||||| |||||||| || |||||||| |||||||||||||||  ||||||||||    
T  39431140 ttgcctgtctatgctctttccttatttaaagctccatcaggtataatctcttccattgaatct 39431078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 302 - 364
Target Start/End: Original strand, 49264251 - 49264313
Alignment:
Q  302 ttgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatct 364  Q
    |||||||||||||| ||||| ||||| |||||||| |||||||||||||||  ||||||||||    
T  49264251 ttgcctgtctatgctctttctttctttaaagctccatcaggtataatctcttccattgaatct 49264313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 402 - 504
Target Start/End: Complemental strand, 52692225 - 52692123
Alignment:
Q  402 acaggaaaatttcctgggtcgcttggaactctgtttgtttacgaaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgtt 501  Q
    ||||||||||||||||  | ||||||| ||| |||||| |||||||||||| |||||| || |||||||| ||  | ||||| |||||| ||||||| ||    
T  52692225 acaggaaaatttcctgaattgcttggagctcggtttgtctacgaaaggagtttggaggattaggagtgaggcaattaagggaatttaattgtgctttatt 52692126  T
Q  502 agg 504  Q
    |||    
T  52692125 agg 52692123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 307 - 352
Target Start/End: Complemental strand, 3074593 - 3074548
Alignment:
Q  307 tgtctatgccctttccttcttcaaagctccgtcaggtataatctct 352  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||    
T  3074593 tgtctatgccctttccttcttcagagctccatcaggtataatctct 3074548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 279 - 351
Target Start/End: Original strand, 5283140 - 5283212
Alignment:
Q  279 ttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctc 351  Q
    |||| ||||||||||||| |||||| |  |||||||  |||||||||||||||||||| |||||||| |||||    
T  5283140 ttctaaagtctgtcttgatctcattactagtctatgatctttccttcttcaaagctccttcaggtatcatctc 5283212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 302 - 374
Target Start/End: Original strand, 42475184 - 42475256
Alignment:
Q  302 ttgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaata 374  Q
    |||||||| |||||||||||||||||||| ||||||||||||||  | ||    |||||||||||||||||||    
T  42475184 ttgcctgtttatgccctttccttcttcaaggctccgtcaggtatcgtatcctctattgaatctatttttaata 42475256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 352
Target Start/End: Original strand, 10710482 - 10710539
Alignment:
Q  294 tgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctct 352  Q
    ||||||| ||| |||||||||| ||| |||||||||||||||| |||||||||||||||    
T  10710482 tgacctctttgtctgtctatgcgctt-ccttcttcaaagctccatcaggtataatctct 10710539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 351
Target Start/End: Original strand, 22191023 - 22191117
Alignment:
Q  257 tcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctc 351  Q
    |||||||| |||||  ||||||| || |||||||||||| | ||  | |||||||||||  |||||||||||| ||| || ||||||||||||||    
T  22191023 tcttttggtggtcgtctggttctccttaagtctgtcttgtcttctcttcctgtctatgctttttccttcttcagagcaccatcaggtataatctc 22191117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 224 - 342
Target Start/End: Complemental strand, 51052813 - 51052695
Alignment:
Q  224 tctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttcct 323  Q
    |||||||| || || ||||||||||| || || ||||| || ||||| ||| |||| || ||||| ||| ||||  |  | ||||||||||| |||||||    
T  51052813 tctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctctacctgtctatgcactttcct 51052714  T
Q  324 tcttcaaagctccgtcagg 342  Q
    |||||||||||||| ||||    
T  51052713 tcttcaaagctccgacagg 51052695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 90 - 351
Target Start/End: Complemental strand, 21409307 - 21409046
Alignment:
Q  90 attcatggttgaatgaagcagcctctattttaaattgcaaagttggtaaagttccgtttctgtatctgggtctttctattggtggtgatccgaagaggtt 189  Q
    |||| ||||||||||||||||| |||||  |   ||| ||||| || ||||| || ||| ||||| |||||||||| |||||||||||||||| ||| ||    
T  21409307 attcttggttgaatgaagcagcgtctatgcttggttgtaaagtgggaaaagtaccctttttgtatttgggtctttcgattggtggtgatccgaggagatt 21409208  T
Q  190 agccttttgggaacctgtgttgaagactgtaaagtctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtct 289  Q
      | |||||||| || ||| || | |  || ||    |||||||| |||||||  |||   ||  | |||||||| |||||  ||||||| || ||||||    
T  21409207 gtcgttttgggagccagtggtggatagagttaaaaagagattatcagggtggcgtagtaaattcttatcttttggtggtcgtctggttctccttaagtct 21409108  T
Q  290 gtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctc 351  Q
    ||| || ||||  | ||||||||||   |||||||||||| ||| || ||||||||||||||    
T  21409107 gtcctgtcctctcttcctgtctatgttttttccttcttcagagcaccatcaggtataatctc 21409046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 352
Target Start/End: Original strand, 43943750 - 43943813
Alignment:
Q  289 tgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctct 352  Q
    ||||||| | ||| ||||||| ||||||||||||||||||| ||||||  || |||||||||||    
T  43943750 tgtcttgtcttcactgcctgtatatgccctttccttcttcagagctcccgcatgtataatctct 43943813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 302 - 376
Target Start/End: Complemental strand, 2654963 - 2654889
Alignment:
Q  302 ttgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaa 376  Q
    |||||||| ||||  ||||| || |||||||||||||||||||| || ||    |||||||||||||||||||||    
T  2654963 ttgcctgtttatgttctttcttttttcaaagctccgtcaggtatcatttcctctattgaatctatttttaataaa 2654889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 504
Target Start/End: Original strand, 7396152 - 7396210
Alignment:
Q  446 aaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgttagg 504  Q
    |||||||||||||||||| | || |||||| ||||||||||||||  |||||| |||||    
T  7396152 aaggagtatggagggttgagggttagacagttgagggagtttaattatgcttttttagg 7396210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 317 - 369
Target Start/End: Original strand, 16586500 - 16586552
Alignment:
Q  317 ctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttt 369  Q
    |||||||| |||||||||||  |||||||||| ||| | ||||||||||||||    
T  16586500 ctttcctttttcaaagctcctgcaggtataatttcttttattgaatctatttt 16586552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 90 - 182
Target Start/End: Original strand, 22190856 - 22190948
Alignment:
Q  90 attcatggttgaatgaagcagcctctattttaaattgcaaagttggtaaagttccgtttctgtatctgggtctttctattggtggtgatccga 182  Q
    |||| ||||||||||||||||| |||||  |   ||| ||||| || || ||||| ||| ||||| |||||||| | ||||||||||||||||    
T  22190856 attcttggttgaatgaagcagcgtctatgcttggttgtaaagtgggaaaggttccctttttgtatttgggtcttccgattggtggtgatccga 22190948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 273 - 333
Target Start/End: Complemental strand, 27889608 - 27889548
Alignment:
Q  273 tggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagc 333  Q
    ||||||| || ||||||||| |||||||  | ||||| |||||| ||||||||||||||||    
T  27889608 tggttctccttaagtctgtcctgacctcgcttcctgtgtatgccatttccttcttcaaagc 27889548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 345
Target Start/End: Original strand, 30650308 - 30650348
Alignment:
Q  305 cctgtctatgccctttccttcttcaaagctccgtcaggtat 345  Q
    ||||||||||| |||||||||||||||||||| | ||||||    
T  30650308 cctgtctatgcgctttccttcttcaaagctcccttaggtat 30650348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 439; Significance: 0; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 439; E-Value: 0
Query Start/End: Original strand, 1 - 508
Target Start/End: Original strand, 14843122 - 14843629
Alignment:
Q  1 tttgagggccgtgttgattttgtttgaggggatgtctggtttgcgagtgaattttcataagagtatgttggttggaattaatattcagaattcatggttg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  14843122 tttgagggccgtgttgattttgtttgaggggatgtctggtttgcgagtgaattttcataagagtatgttggttggaattaatattcaaaattcatggttg 14843221  T
Q  101 aatgaagcagcctctattttaaattgcaaagttggtaaagttccgtttctgtatctgggtctttctattggtggtgatccgaagaggttagccttttggg 200  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14843222 aatgaagcagcctctattttaaattgcaaagttggtaaagttacgtttctgtatctgggtctttctattggtggtgatccgaagaggttagccttttggg 14843321  T
Q  201 aacctgtgttgaagactgtaaagtctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctc 300  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||| |||||||||||||    
T  14843322 aacctgtgttgaagaatataaagtctagattatcggggtggcaaagtagctatctctcttttgggggtcggttgattcttctcaagactgtcttgacctc 14843421  T
Q  301 attgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggat 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||    
T  14843422 attgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaatttttttggggagggagtgaggat 14843521  T
Q  401 aacaggaaaatttcctgggtcgcttggaactctgtttgtttacgaaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgt 500  Q
    || |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  14843522 aaaaggaaaatttcctgggtcgcttggaactctgtttgtttacaaaaggagtatggagggttgggagtgagaaagctgagggagtttaatagtgatttgt 14843621  T
Q  501 taggtaaa 508  Q
    ||||||||    
T  14843622 taggtaaa 14843629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 50 - 471
Target Start/End: Complemental strand, 25351329 - 25350907
Alignment:
Q  50 aattttcataagagtatgttggttggaattaatattcagaattcatggttgaatgaagcagcctctattttaaattgcaaagttggtaaagttccgtttc 149  Q
    |||||| |||| || ||||||| ||| |||||||||  | | || ||||||| ||| || ||||| |||||||| || ||||| || ||  |||| ||||    
T  25351329 aattttaataaaagcatgttgggtgggattaatattgcggagtcttggttgattgaggcggcctcaattttaaactgtaaagtgggcaagattccctttc 25351230  T
Q  150 tgtatctgggtctttctattggtggtgatccgaagaggttagccttttgggaacctgtgttgaagactgtaaagtctagattatcggggtggcaaagtcg 249  Q
    |||||||||||||||||||||||||| |||||||  ||||||| || ||||| ||||||||| | ||  | ||||| ||||| ||||||||||| |||||    
T  25351229 tgtatctgggtctttctattggtggtaatccgaatcggttagcattctgggatcctgtgttgcatacaattaagtccagattgtcggggtggcagagtcg 25351130  T
Q  250 ctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatc 349  Q
    |||||| || | ||| ||||||||||| ||| | |||| ||||||||||||  | ||||||||||| |||||||||||||||||||||||||||||||||    
T  25351129 ctttctatcctatggtggtcggttggtccttttaaagtttgtcttgacctcgcttcctgtctatgctctttccttcttcaaagctccgtcaggtataatc 25351030  T
Q  350 tctgtcattgaatctatttttaat-aaannnnnnnggggagggagtgaggataacaggaaaatttcctgggtcgcttggaactctgtttgtttacgaaag 448  Q
    ||| |||||||||||||||||||| |||       ||||||||||||||||||||||||||||||||||| | ||||||| ||| |||||||||||||||    
T  25351029 tctatcattgaatctatttttaataaaaaaaatttggggagggagtgaggataacaggaaaatttcctggattgcttggagctcagtttgtttacgaaag 25350930  T
Q  449 gagtatggagggttgggagtgag 471  Q
    |||| |||||| ||||| |||||    
T  25350929 gagtttggaggattgggtgtgag 25350907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 95 - 504
Target Start/End: Complemental strand, 26514786 - 26514376
Alignment:
Q  95 tggttgaatgaagcagcctctattttaaattgcaaagttggtaaagttccgtttctgtatctgggtctttctattggtggtgatccgaagaggttagcct 194  Q
    |||||| |||| || ||||| ||||||||||| || || |||||  |||||||| |||||||||| |||||| |||| ||  ||||||   ||||||| |    
T  26514786 tggttgcatgaggcggcctcaattttaaattgtaaggtgggtaagattccgtttttgtatctgggcctttctgttggaggcaatccgactcggttagctt 26514687  T
Q  195 tttgggaacctgtgttgaagactgtaaagtctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtctt 294  Q
    ||||||| || |||||| | | | |||||||| |||| ||||||||||| ||||||||||| |||||||| ||||| ||||| ||| | ||||| |||||    
T  26514686 tttgggacccagtgttgcatattataaagtctcgattgtcggggtggcatagtcgctttctatcttttggtggtcgtttggtccttttgaagtcggtctt 26514587  T
Q  295 gacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaa-taaannnnnnnggggagggag 393  Q
    ||||||  | ||||||||||| ||||| ||||||||||||| |||||||||| ||||| |||||||||||||||||||  |||       ||||||||||    
T  26514586 gacctcgcttcctgtctatgctctttctttcttcaaagctctgtcaggtatactctctatcattgaatctatttttaacaaaatttttttggggagggag 26514487  T
Q  394 tgaggataacaggaaaatttcctgggtcgcttggaactctgtttgtttacgaaaggagtatggagggttgggagtgagacagctgagggagtttaatagt 493  Q
    ||||||||| ||||||||||||||| | ||||||| ||| || ||||||||||||||||||||||||||||| ||||||||| | ||||| |||||||||    
T  26514486 tgaggataataggaaaatttcctggattgcttggagctcagtatgtttacgaaaggagtatggagggttgggggtgagacagataagggaatttaatagt 26514387  T
Q  494 gctttgttagg 504  Q
    ||||| |||||    
T  26514386 gctttattagg 26514376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 113 - 508
Target Start/End: Original strand, 14686105 - 14686500
Alignment:
Q  113 tctattttaaattgcaaagttggtaaagttccgtttctgtatctgggtctttctattggtggtgatccgaagaggttagccttttgggaacctgtgttga 212  Q
    |||||||||||||| || || ||||   |||||||| ||||||||||  | || ||||||||||||||   | || |||| |||||||| ||||||||||    
T  14686105 tctattttaaattgtaaggtgggtacgattccgtttgtgtatctgggcttatcgattggtggtgatcctcggcggatagctttttgggaccctgtgttga 14686204  T
Q  213 agactgtaaagtctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtcta 312  Q
    | ||  | || |||||| | | ||||||||||||||| || || |||| ||| ||||||||||| ||||| || |||||| || || |||| ||||||||    
T  14686205 aaacaattaaatctagactgttggggtggcaaagtcgtttcctttcttatggaggtcggttggtccttctgaattctgtcctgtccgcattacctgtcta 14686304  T
Q  313 tgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaatt 412  Q
    ||| |||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||        ||||||||||||||||||||||||||||     
T  14686305 tgctctttccttcttcaaggctccgtcaggtataatctctatcattgaatctatgtttaataattttttttggggagggagtgaggataacaggaaaatc 14686404  T
Q  413 tcctgggtcgcttggaactctgtttgtttacgaaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgttaggtaaa 508  Q
    |||||| | |||||| ||||| |||||||||| ||||| ||||| || |||||||||||   | |  |||| |||||||| |||||||||||||||    
T  14686405 tcctggattgcttggcactctatttgtttacgtaaggaatatggtggtttgggagtgaggaggttacgggaatttaatagcgctttgttaggtaaa 14686500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 46 - 490
Target Start/End: Complemental strand, 32186793 - 32186349
Alignment:
Q  46 agtgaattttcataagagtatgttggttggaattaatattcagaattcatggttgaatgaagcagcctctattttaaattgcaaagttggtaaagttccg 145  Q
    ||||||||||||||||||| |  |||| ||||||||||||  ||| || ||||||| |||| |||| |||||||||||||| || || |||||  ||||     
T  32186793 agtgaattttcataagagtctactggtaggaattaatattgggaactcgtggttgactgaaacagcatctattttaaattgtaaggtgggtaatattcca 32186694  T
Q  146 tttctgtatctgggtctttctattggtggtgatccgaagaggttagccttttgggaacctgtgttgaagactgtaaagtctagattatcggggtggcaaa 245  Q
    ||| ||||||| ||||| || |||| |||||||||    ||||||||||||||||||||| || ||   ||| | || |||||| | ||   |||||| |    
T  32186693 tttttgtatcttggtctctcaattgatggtgatcctcgaaggttagccttttgggaacctatgatgtctactattaaatctagactgtcaaagtggcaga 32186594  T
Q  246 gtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtat 345  Q
    |||||||||| ||||||||||| || ||| ||||||| ||||||||| |||||||  | ||||||||  | ||||| ||||||||||||||| ||| |||    
T  32186593 gtcgctttctatcttttgggggccgcttgattcttcttaagtctgtcctgacctcgcttcctgtctacactctttctttcttcaaagctccgacagatat 32186494  T
Q  346 aatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaatttcctgggtcgcttggaactctgtttgtttacga 445  Q
    |||||||  ||||||| || | ||||| ||           |||||||||||||||||||||||||||||||| | ||||||| |||| |||||||| |     
T  32186493 aatctcttccattgaaactttatttaagaattttttttaaagagggagtgaggataacaggaaaatttcctggattgcttggagctctatttgtttaggt 32186394  T
Q  446 aaggagtatggagggttgggagtgagacagctgagggagtttaat 490  Q
    |||||||||| |||| |||| ||||| ||| | || |||||||||    
T  32186393 aaggagtatgaagggctgggggtgaggcagtttagagagtttaat 32186349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 233 - 459
Target Start/End: Complemental strand, 19350867 - 19350641
Alignment:
Q  233 tcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaag 332  Q
    ||||||||||||||||| ||||| ||||| |||||||| ||||||||||| ||||||||  |||  ||  | ||||||||||  ||||||||||||||||    
T  19350867 tcggggtggcaaagtcgttttctatctttcgggggtcgtttggttcttcttaagtctgtactgagttcgcttcctgtctatgtactttccttcttcaaag 19350768  T
Q  333 ctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaatttcctgggtcgcttggaactc 432  Q
    |||||||||||||||| ||| ||||||||||| | |||||||||       ||||||| ||||||||||| ||||||||||||||| |||||| || |||    
T  19350767 ctccgtcaggtataatttctctcattgaatctttgtttaataaatttttttggggaggtagtgaggataataggaaaatttcctggatcgcttagagctc 19350668  T
Q  433 tgtttgtttacgaaaggagtatggagg 459  Q
    |||||||||   |||||||| ||||||    
T  19350667 tgtttgtttgaaaaaggagtttggagg 19350641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 272 - 491
Target Start/End: Original strand, 502788 - 503007
Alignment:
Q  272 ttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctattttta 371  Q
    |||||||||||||| ||||   |||||||  ||||||||||||| ||||| ||||||||||||||||||||||||||||||  | |||||||| | ||||    
T  502788 ttggttcttctcaaatctgcgctgacctctatgcctgtctatgctctttctttcttcaaagctccgtcaggtataatctctacccttgaatctttattta 502887  T
Q  372 ataaannnnnnnggggagggagtgaggataacaggaaaatttcctgggtcgcttggaactctgtttgtttacgaaaggagtatggagggttgggagtgag 471  Q
    ||||        |||| |||||||||||| | |||||||| || ||| | | ||||| |||||||||| ||| |||||||| ||||||||| || || ||    
T  502888 ataattttttttggggtgggagtgaggatcataggaaaatgtcttggataggttggagctctgtttgtctacaaaaggagtttggagggttaggggttag 502987  T
Q  472 acagctgagggagtttaata 491  Q
    |||| ||| |||||||||||    
T  502988 acagttgaaggagtttaata 503007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 219 - 490
Target Start/End: Complemental strand, 33640854 - 33640583
Alignment:
Q  219 taaagtctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccct 318  Q
    ||||||||||| | || || ||| | ||||| || ||||||||||| || || |||||||||||||| ||||| ||||||||  ||||||||||||| ||    
T  33640854 taaagtctagactgtcaggttggaatagtcgtttcctctcttttggtggccgtttggttcttctcaaatctgtgttgacctctctgcctgtctatgctct 33640755  T
Q  319 ttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaatttcctgg 418  Q
    ||| ||||||||||||| ||| |||||||| |||  | |||||||| | ||||||||        |||| |||||||||||| | |||||||| || |||    
T  33640754 ttctttcttcaaagctctgtcgggtataatttctacccttgaatctttatttaataattttttttggggtgggagtgaggatcataggaaaatgtcttgg 33640655  T
Q  419 gtcgcttggaactctgtttgtttacgaaaggagtatggagggttgggagtgagacagctgagggagtttaat 490  Q
     | | |||||||||||||||| | |  ||||||| ||||||||| || || |||||| ||| ||||||||||    
T  33640654 ataggttggaactctgtttgtctccagaaggagtttggagggttaggggttagacagttgaaggagtttaat 33640583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 224 - 351
Target Start/End: Complemental strand, 26206265 - 26206138
Alignment:
Q  224 tctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttcct 323  Q
    |||||| | ||||| ||| | ||||| ||||| |||||||| ||||| |||||||||||||| |||||| ||||||| |||||||||||||| |||||||    
T  26206265 tctagactgtcgggttggaatagtcggtttctatcttttggtggtcgcttggttcttctcaaatctgtcctgacctctttgcctgtctatgcactttcct 26206166  T
Q  324 tcttcaaagctccgtcaggtataatctc 351  Q
    ||||||||||||| ||||||||||||||    
T  26206165 tcttcaaagctccatcaggtataatctc 26206138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 251 - 351
Target Start/End: Complemental strand, 15674737 - 15674637
Alignment:
Q  251 tttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatct 350  Q
    |||||||||||||| ||||| | |||||| ||||| ||||||||||||||  ||||||||||||| ||||||||||||||||||||  ||||||||||||    
T  15674737 tttctctcttttggtggtcgctgggttctactcaaatctgtcttgacctctctgcctgtctatgcactttccttcttcaaagctccagcaggtataatct 15674638  T
Q  351 c 351  Q
    |    
T  15674637 c 15674637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 243 - 376
Target Start/End: Complemental strand, 10363059 - 10362927
Alignment:
Q  243 aaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcagg 342  Q
    ||||||| ||||| || ||||| ||||| || ||||||||||||||||||||||||||  | ||||||||||| |||||||||||||| | |||||||      
T  10363059 aaagtcggtttctgtcgtttggtggtcgtttagttcttctcaagtctgtcttgacctctctacctgtctatgctctttccttcttcaaggttccgtca-a 10362961  T
Q  343 tataatctctgtcattgaatctatttttaataaa 376  Q
    |||||| |||  |||||| |||||||||||||||    
T  10362960 tataatttcttccattgattctatttttaataaa 10362927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 251 - 507
Target Start/End: Original strand, 13563165 - 13563427
Alignment:
Q  251 tttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatct 350  Q
    ||||||||||| |  || ||||||||| || |||| | |||| | |||||  ||||||||||||| |||||||| |||||||||||||||||||||||||    
T  13563165 tttctctctttcgaaggccggttggtttttatcaaatttgtcctaacctctctgcctgtctatgctctttcctttttcaaagctccgtcaggtataatct 13563264  T
Q  351 ctgtcattgaatctatttttaataaannnnnnng-------gggagggagtgaggataacaggaaaatttcctgggtcgcttggaactctgtttgtttac 443  Q
     |  |||||||| ||||||||| |||               |||||| |||||| |||||||||||||||||||| ||||||||| |  | | ||||  |    
T  13563265 tttccattgaat-tatttttaaaaaataaaaataaaaattcgggaggaagtgagaataacaggaaaatttcctggatcgcttggagcgatatatgttctc 13563363  T
Q  444 gaaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgttaggtaa 507  Q
    ||||||||||||| ||  |||| ||||| || |||||||||||||||  ||||||| |||||||    
T  13563364 gaaaggagtatgggggtctgggtgtgaggcaactgagggagtttaatcttgctttgctaggtaa 13563427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 385 - 490
Target Start/End: Original strand, 29976377 - 29976482
Alignment:
Q  385 gggagggagtgaggataacaggaaaatttcctgggtcgcttggaactctgtttgtttacgaaaggagtatggagggttgggagtgagacagctgagggag 484  Q
    |||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||  |||||||| ||||||  |||| ||||| ||| || ||||     
T  29976377 gggaggtagtgaggataacaggaaaatttcctggatcgcttggagctctgtttgtttaaaaaaggagtttggaggtctgggggtgaggcagttgcgggaa 29976476  T
Q  485 tttaat 490  Q
    ||||||    
T  29976477 tttaat 29976482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 219 - 352
Target Start/End: Original strand, 21629325 - 21629458
Alignment:
Q  219 taaagtctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccct 318  Q
    ||||||||||||| || || ||||| ||| | |  || || ||||| ||||| ||| | |||||||| |||||||||||  |  | ||||||||||| ||    
T  21629325 taaagtctagattgtctggttggcatagtaggtacctttcctttggtggtcgcttgatacttctcaaatctgtcttgactgcgcttcctgtctatgcact 21629424  T
Q  319 ttccttcttcaaagctccgtcaggtataatctct 352  Q
    |||||| |||||||||||||||||||||||||||    
T  21629425 ttcctttttcaaagctccgtcaggtataatctct 21629458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 352
Target Start/End: Original strand, 649341 - 649409
Alignment:
Q  284 aagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctct 352  Q
    ||||||||  |||||||  ||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  649341 aagtctgttctgacctctctgcctgtctatgcgctttccttcttcaaagctccatcaggtataatctct 649409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 352
Target Start/End: Original strand, 11060130 - 11060198
Alignment:
Q  284 aagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctct 352  Q
    ||||||||| ||||||  |||||||||||||| |||||||||||||||| ||| |||||||||||||||    
T  11060130 aagtctgtcctgacctttttgcctgtctatgcgctttccttcttcaaagttccatcaggtataatctct 11060198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 240 - 364
Target Start/End: Complemental strand, 13938634 - 13938510
Alignment:
Q  240 ggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtc 339  Q
    |||| ||||| || || |||||||| || || ||| | |||||||| |||||| ||||  || | ||| ||||||| |||||||| ||||||||||||||    
T  13938634 ggcatagtcggttcctttcttttggtggccgattgatccttctcaaatctgtcctgactgcacttcctatctatgctctttcctttttcaaagctccgtc 13938535  T
Q  340 aggtataatctctgtcattgaatct 364  Q
    |||||||||||||  ||||||||||    
T  13938534 aggtataatctcttccattgaatct 13938510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 305 - 376
Target Start/End: Complemental strand, 2554456 - 2554385
Alignment:
Q  305 cctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaa 376  Q
    ||||||||||| |||||||| |||||||||||||| ||||||||||||  |||||||||| | |||||||||    
T  2554456 cctgtctatgcactttcctttttcaaagctccgtcgggtataatctcttccattgaatctttgtttaataaa 2554385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 302 - 364
Target Start/End: Complemental strand, 13086397 - 13086335
Alignment:
Q  302 ttgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatct 364  Q
    |||||||| ||||| ||||||||||| |||||||| ||||||||||||||| |||||||||||    
T  13086397 ttgcctgtttatgctctttccttctttaaagctccatcaggtataatctctttcattgaatct 13086335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 267 - 376
Target Start/End: Original strand, 17576968 - 17577077
Alignment:
Q  267 gtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctat 366  Q
    |||| ||| |||| ||||| |||||||||||  |  | ||||||||| | |||||||| |||||||||||||||||||||||||||   ||||||||| |    
T  17576968 gtcgcttgattctgctcaaatctgtcttgactgcgcttcctgtctattcactttcctttttcaaagctccgtcaggtataatctcttctattgaatcttt 17577067  T
Q  367 ttttaataaa 376  Q
     |||||||||    
T  17577068 gtttaataaa 17577077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 260 - 352
Target Start/End: Original strand, 17605578 - 17605670
Alignment:
Q  260 tttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctct 352  Q
    ||||| ||||| ||| | |||||||| |||||||||||  |  | ||||||||||| |||||||| ||||||||||| |||||||||||||||    
T  17605578 tttggtggtcgtttgatacttctcaaatctgtcttgactgcgcttcctgtctatgcgctttcctttttcaaagctccatcaggtataatctct 17605670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 305 - 414
Target Start/End: Original strand, 18681863 - 18681972
Alignment:
Q  305 cctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataaca 404  Q
    |||||||| || |||||||| ||||||||||| || ||||||||||||  |||||||||| | || ||||||       ||||||||||||||||||| |    
T  18681863 cctgtctacgctctttcctttttcaaagctccatcgggtataatctctcccattgaatctttgttaaataaatttttttggggagggagtgaggataaaa 18681962  T
Q  405 ggaaaatttc 414  Q
    | ||||||||    
T  18681963 gaaaaatttc 18681972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 305 - 414
Target Start/End: Original strand, 24766703 - 24766812
Alignment:
Q  305 cctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataaca 404  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||  |||| ||||| | || ||||||       |||||| | |||||||||| |    
T  24766703 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctcttccattaaatctttgttaaataaatttttttggggagagggtgaggataaaa 24766802  T
Q  405 ggaaaatttc 414  Q
    | ||||||||    
T  24766803 gaaaaatttc 24766812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 306 - 508
Target Start/End: Original strand, 1104237 - 1104439
Alignment:
Q  306 ctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacag 405  Q
    |||||||||| |||||||||||||||||||| | ||||| |||||||   ||||||||| | || |||||        |||||||||||||||| || ||    
T  1104237 ctgtctatgctctttccttcttcaaagctccattaggtacaatctcttatattgaatctttattgaataattttttttggggagggagtgaggacaatag 1104336  T
Q  406 gaaaatttcctgggtcgcttggaactctgtttgtttacgaaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgttaggt 505  Q
     |||||||  ||| ||   |||||   |||||||  | ||||||| | ||||||||| || || || ||| |||||||| |||| | |||||||||||||    
T  1104337 caaaattttttggatcagctggaaaaatgtttgtccaggaaaggattctggagggtttggggttaggcagatgagggagattaacactgctttgttaggt 1104436  T
Q  506 aaa 508  Q
    |||    
T  1104437 aaa 1104439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 251 - 352
Target Start/End: Complemental strand, 2923735 - 2923634
Alignment:
Q  251 tttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatct 350  Q
    ||||| |||||||| |||||  ||||||| || ||||||| |||| | || |||  ||||||||   ||||||||||||||| |||||||||||||||||    
T  2923735 tttctttcttttggtggtcgcctggttctcctaaagtctgccttgtcttccttgtttgtctatgttttttccttcttcaaagttccgtcaggtataatct 2923636  T
Q  351 ct 352  Q
    ||    
T  2923635 ct 2923634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 251 - 364
Target Start/End: Complemental strand, 21549752 - 21549639
Alignment:
Q  251 tttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatct 350  Q
    |||||||||||||| || || ||| |||| ||||| || ||  |||| ||  ||| ||||||||| ||||| ||||||||||||||  ||||||||||||    
T  21549752 tttctctcttttggtggccgcttgattctcctcaaatcagttctgacatctctgcttgtctatgctctttctttcttcaaagctccaacaggtataatct 21549653  T
Q  351 ctgtcattgaatct 364  Q
    ||  ||||||||||    
T  21549652 cttccattgaatct 21549639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 369
Target Start/End: Original strand, 19616120 - 19616232
Alignment:
Q  257 tcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtca 356  Q
    |||||||| ||||| ||| | || || || |||||| || ||||  ||||||||||||||||||| || || | ||||||  ||||||||||||||  ||    
T  19616120 tcttttggtggtcgcttgatcctccttaaatctgtcatgtcctctctgcctgtctatgccctttctttttttagagctcctgcaggtataatctcttcca 19616219  T
Q  357 ttgaatctatttt 369  Q
    |||||||||||||    
T  19616220 ttgaatctatttt 19616232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 303 - 451
Target Start/End: Original strand, 17712882 - 17713030
Alignment:
Q  303 tgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataa 402  Q
    |||||||||| ||||| | ||| |||| ||||||  ||| ||||||||||  ||| ||||||||| ||| |||        |||| ||| ||||||||||    
T  17712882 tgcctgtctacgccctattctttttcagagctcccacagttataatctcttccatcgaatctattcttattaattttttttggggtgggggtgaggataa 17712981  T
Q  403 caggaaaatttcctgggtcgcttggaactctgtttgtttacgaaaggag 451  Q
     ||||||||| | ||||| | ||||||||||||||||||| | ||||||    
T  17712982 taggaaaattgcttgggttgattggaactctgtttgtttaagtaaggag 17713030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 306 - 352
Target Start/End: Original strand, 17078357 - 17078403
Alignment:
Q  306 ctgtctatgccctttccttcttcaaagctccgtcaggtataatctct 352  Q
    |||| ||||| |||||||||||||||||||| |||||||||||||||    
T  17078357 ctgtttatgcgctttccttcttcaaagctccatcaggtataatctct 17078403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 367
Target Start/End: Original strand, 33753458 - 33753522
Alignment:
Q  303 tgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatt 367  Q
    |||||||||| ||||| ||||| |||||||||||  ||||||||||||||  ||| |||||||||    
T  33753458 tgcctgtctacgccctatcctttttcaaagctcccgcaggtataatctcttccatcgaatctatt 33753522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 369
Target Start/End: Original strand, 1307917 - 1308020
Alignment:
Q  266 ggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatcta 365  Q
    ||||| ||| |||| || ||||| ||| || | ||| |||||||||| | |||||| || |||| ||||||  ||||||||||||||  |||||||||||    
T  1307917 ggtcgcttgattctccttaagtccgtcctgtcttcactgcctgtctacgtcctttcttttttcagagctccagcaggtataatctcttccattgaatcta 1308016  T
Q  366 tttt 369  Q
    ||||    
T  1308017 tttt 1308020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 364
Target Start/End: Complemental strand, 11469412 - 11469365
Alignment:
Q  317 ctttccttcttcaaagctccgtcaggtataatctctgtcattgaatct 364  Q
    |||||||||||||||||||| |||||| ||||||||  ||||||||||    
T  11469412 ctttccttcttcaaagctccatcaggtttaatctcttccattgaatct 11469365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 346
Target Start/End: Complemental strand, 32198059 - 32198012
Alignment:
Q  299 tcattgcctgtctatgccctttccttcttcaaagctccgtcaggtata 346  Q
    ||||||||||| ||||| ||||| || |||||||||||||||||||||    
T  32198059 tcattgcctgtttatgctctttcttttttcaaagctccgtcaggtata 32198012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 10363288 - 10363230
Alignment:
Q  14 ttgattttgtttgaggggatgtctggtttgcgagtgaattttcataagagtatgttggt 72  Q
    ||||||||||||||||  ||||||||||||  ||| |||||| |||| |||||||||||    
T  10363288 ttgattttgtttgaggctatgtctggtttgaaagtaaattttaataaaagtatgttggt 10363230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 14372293 - 14372339
Alignment:
Q  318 tttccttcttcaaagctccgtcaggtataatctctgtcattgaatct 364  Q
    ||||||| |||||||||||| ||||||||||||||  ||||||||||    
T  14372293 tttcctttttcaaagctccgccaggtataatctcttccattgaatct 14372339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 275 - 345
Target Start/End: Complemental strand, 24573934 - 24573864
Alignment:
Q  275 gttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtat 345  Q
    |||||||| |||| ||||||||||||  | ||| |||| || |||||||||||||||||||| | ||||||    
T  24573934 gttcttcttaagtatgtcttgacctctctccctatctaggctctttccttcttcaaagctcccttaggtat 24573864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 376
Target Start/End: Original strand, 12673406 - 12673479
Alignment:
Q  303 tgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaa 376  Q
    ||||||||||||| |||||||||||||| | ||| ||  |||||||||||  ||| |||||| |||| ||||||    
T  12673406 tgcctgtctatgctctttccttcttcaacgatccatctagtataatctcttccatagaatctcttttgaataaa 12673479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 343
Target Start/End: Complemental strand, 29824902 - 29824777
Alignment:
Q  218 gtaaagtctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccc 317  Q
    ||||| |||||||| |||||  || ||||| | || |||||||| || ||||| || ||||||||||||| |||  |||  ||  ||| |||||  || |    
T  29824902 gtaaaatctagattgtcgggtcggaaaagttgtttcctctctttcggaggtcgtttagttcttctcaagtttgttatgatttctctgcatgtcttcgctc 29824803  T
Q  318 tttccttcttcaaagctccgtcaggt 343  Q
    ||||||| ||||||||||||||||||    
T  29824802 tttcctttttcaaagctccgtcaggt 29824777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 347; Significance: 0; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 347; E-Value: 0
Query Start/End: Original strand, 1 - 508
Target Start/End: Complemental strand, 31676086 - 31675579
Alignment:
Q  1 tttgagggccgtgttgattttgtttgaggggatgtctggtttgcgagtgaattttcataagagtatgttggttggaattaatattcagaattcatggttg 100  Q
    |||||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||   | |||| ||||||    
T  31676086 tttgagggccgttttgtatttgtttgaggggatgtctggcttgcgagtgaattttcataagagtatgttggttggaattaatatctcggattcttggttg 31675987  T
Q  101 aatgaagcagcctctattttaaattgcaaagttggtaaagttccgtttctgtatctgggtctttctattggtggtgatccgaagaggttagccttttggg 200  Q
    ||||| || | ||||||||| ||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  31675986 aatgaggccgtctctattttgaattgcaaagttggtaaagctccatttttgtatctgggtctttctattggtggtgatccgaagaggttagcattttggg 31675887  T
Q  201 aacctgtgttgaagactgtaaagtctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctc 300  Q
    | ||||||||||||||  | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  31675886 agcctgtgttgaagaccattaagtctagattatcggggtggcaaaatcgctttctctcttttgggggtcggttggttctactcaagtctgtcctgacctc 31675787  T
Q  301 attgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggat 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||    
T  31675786 attgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaatattttttttttgggagggagtgaggat 31675687  T
Q  401 aacaggaaaatttcctgggtcgcttggaactctgtttgtttacgaaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgt 500  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||   ||||||||    
T  31675686 aacaggaaaatctcctgggtcgcttgaaactctgtttgtttacgaaaggagtatggagggttaggggtgagacagttgagggagtttaaccatgctttgt 31675587  T
Q  501 taggtaaa 508  Q
    ||||||||    
T  31675586 taggtaaa 31675579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 339; E-Value: 0
Query Start/End: Original strand, 1 - 508
Target Start/End: Original strand, 31920337 - 31920843
Alignment:
Q  1 tttgagggccgtgttgattttgtttgaggggatgtctggtttgcgagtgaattttcataagagtatgttggttggaattaatattcagaattcatggttg 100  Q
    |||||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||   | |||| ||||||    
T  31920337 tttgagggccgttttgtatttgtttgaggggatgtctggcttgcgagtgaattttcataagagtaggttggttggaattaatatctcggattcttggttg 31920436  T
Q  101 aatgaagcagcctctattttaaattgcaaagttggtaaagttccgtttctgtatctgggtctttctattggtggtgatccgaagaggttagccttttggg 200  Q
    ||| | || ||||||||||| ||||||||||||||||||| ||| ||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  31920437 aataaggccgcctctattttgaattgcaaagttggtaaagctccatttttgtatttgggtctttctattggtggtgatccgaagaggttagcattttggg 31920536  T
Q  201 aacctgtgttgaagactgtaaagtctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctc 300  Q
    | ||||||||||||||  | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  31920537 agcctgtgttgaagaccattaagtctagattatcggggtggcaaaatcgctttctctcttttgggggtcggttggttctactcaagtctgtcctgacctc 31920636  T
Q  301 attgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggat 400  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||        ||||||||||||||||    
T  31920637 attgcctgtctatgccctttccttcttcaaagcttcgtcaagtataatctctgtcattgaatctatttttaataaaaaaattt-gggagggagtgaggat 31920735  T
Q  401 aacaggaaaatttcctgggtcgcttggaactctgtttgtttacgaaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgt 500  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||   ||||||||    
T  31920736 aacaggaaaatctcctgggtcgcttgaaactctgtttgtttacgaaaggagtatggagggttaggagtgagacagttgagggagtttaaccatgctttgt 31920835  T
Q  501 taggtaaa 508  Q
    ||||||||    
T  31920836 taggtaaa 31920843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 90 - 508
Target Start/End: Complemental strand, 34830459 - 34830041
Alignment:
Q  90 attcatggttgaatgaagcagcctctattttaaattgcaaagttggtaaagttccgtttctgtatctgggtctttctattggtggtgatccgaagaggtt 189  Q
    |||| |||||| |||| ||||||||||| |||||||| || ||||| || ||||||||  ||||||||||  | || ||||||||||| |||  ||||||    
T  34830459 attcgtggttgtatgaggcagcctctatcttaaattgtaaggttggcaaggttccgttcgtgtatctgggcttatcgattggtggtgacccgtggaggtt 34830360  T
Q  190 agccttttgggaacctgtgttgaagactgtaaagtctagattatcggggtggcaaagtcgctttctctcttttggggg-tcggttggttcttctcaagtc 288  Q
    ||| || |||||||| ||| |||| ||  | || |||||||| ||||||||||||||||| |||||||||| |||||| ||||||||| ||||| |||||    
T  34830359 agcattctgggaaccagtgatgaataccattaaatctagattgtcggggtggcaaagtcgttttctctcttatggggggtcggttggtccttcttaagtc 34830260  T
Q  289 tgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnngggga 388  Q
    |||| |||||   || ||||||||||| ||||||||||||   |||||||||||||||||||||| ||||||||||||||||||| ||        ||||    
T  34830259 tgtcctgaccgtgttacctgtctatgctctttccttcttcctggctccgtcaggtataatctctgccattgaatctatttttaat-aattttttttggga 34830161  T
Q  389 gggagtgaggataacaggaaaatttcctgggtcgcttggaactctgtttgtttacgaaaggagtatggagggttgggagtgagacagctgagggagttta 488  Q
    |||||||||||||||||||||||||||||| | ||||||| ||||||||||||||| |||||||||||||||||||| |||||  || ||   || ||||    
T  34830160 gggagtgaggataacaggaaaatttcctggattgcttggagctctgtttgtttacgtaaggagtatggagggttgggggtgaggaagttgcatgaattta 34830061  T
Q  489 atagtgctttgttaggtaaa 508  Q
    ||||||||||||||||||||    
T  34830060 atagtgctttgttaggtaaa 34830041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 104 - 508
Target Start/End: Original strand, 40512812 - 40513216
Alignment:
Q  104 gaagcagcctctattttaaattgcaaagttggtaaagttccgtttctgtatctgggtctttctattggtggtgatccgaagaggttagccttttgggaac 203  Q
    |||||||| || ||||||||||| || ||||| ||  |||| ||| ||||||||||| | || || ||||||||||| | ||| ||||| || |||||      
T  40512812 gaagcagcatcaattttaaattgtaaggttgggaagattccttttgtgtatctgggtttatcgataggtggtgatccaaggagattagcattctgggatt 40512911  T
Q  204 ctgtgttgaagactgtaaagtctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcatt 303  Q
    |||||||| | ||  | || |||||| | | ||||||||||||||| |||||||||||||| ||||||||||| ||||| ||||||||| ||||  ||||    
T  40512912 ctgtgttgcaaacaattaaatctagactgttggggtggcaaagtcgttttctctcttttggaggtcggttggtccttcttaagtctgtcctgactgcatt 40513011  T
Q  304 gcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataac 403  Q
     ||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||       |||||||||||||||| |||    
T  40513012 acctgtctatgctctttccttcttcaaggctccgtcaggtataatctctatcattgaatctctttttaataaatttttttggggagggagtgaggaaaac 40513111  T
Q  404 aggaaaatttcctgggtcgcttggaactctgtttgtttacgaaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgttag 503  Q
    ||||||||||||||||| ||||||| ||||||||| ||||| ||||||||||| || ||||| |||||  || ||  ||| |||||||||||||||||||    
T  40513112 aggaaaatttcctgggtagcttggagctctgtttgcttacgtaaggagtatgggggtttgggggtgaggaagttgcaggattttaatagtgctttgttag 40513211  T
Q  504 gtaaa 508  Q
    |||||    
T  40513212 gtaaa 40513216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 50 - 409
Target Start/End: Complemental strand, 53942352 - 53941993
Alignment:
Q  50 aattttcataagagtatgttggttggaattaatattcagaattcatggttgaatgaagcagcctctattttaaattgcaaagttggtaaagttccgtttc 149  Q
    |||||| |||| || ||||||||||| |||||||||  | | || ||||||||||| || ||||| |||||||| || || || || ||  |||| |||     
T  53942352 aattttaataaaagcatgttggttggtattaatattgcggagtcttggttgaatgaggcggcctcaattttaaactgtaaggtgggcaagattccttttt 53942253  T
Q  150 tgtatctgggtctttctattggtggtgatccgaagaggttagccttttgggaacctgtgttgaagactgtaaagtctagattatcggggtggcaaagtcg 249  Q
    |||||||||||||||||||||||||| |||||||  ||||||| || ||||| ||||||||| | ||  | ||||| ||||| ||||||||||| |||||    
T  53942252 tgtatctgggtctttctattggtggtaatccgaatcggttagcattctgggatcctgtgttgcatacaattaagtccagattgtcggggtggcagagtcg 53942153  T
Q  250 ctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatc 349  Q
    |||||| || | ||| ||||||||||| ||| | |||||||||||||||||  | | ||||||||| |||||||||||||||||||||||||||||||||    
T  53942152 ctttctatcctatggtggtcggttggtccttttaaagtctgtcttgacctcgcttcttgtctatgctctttccttcttcaaagctccgtcaggtataatc 53942053  T
Q  350 tctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaa 409  Q
    ||| |||||||||||||||||||||||       ||||||||||||||||||||| ||||    
T  53942052 tctatcattgaatctatttttaataaaaaattttggggagggagtgaggataacatgaaa 53941993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 117 - 459
Target Start/End: Complemental strand, 19876282 - 19875940
Alignment:
Q  117 ttttaaattgcaaagttggtaaagttccgtttctgtatctgggtctttctattggtggtgatccgaagaggttagccttttgggaacctgtgttgaagac 216  Q
    |||||||||| ||||| || ||| ||| |||  | ||||| ||||| |||||||| |||||||| |  |  ||||| ||||||||||||||| ||   ||    
T  19876282 ttttaaattgtaaagtgggcaaaattctgttcttatatcttggtctatctattggcggtgatcctagaaaattagctttttgggaacctgtggtgtctac 19876183  T
Q  217 tgtaaagtctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgcc 316  Q
    | | ||  ||||||| ||||||||||||||| | ||||| ||||| |||||||| ||||||||||| ||||||||| |||| ||  | |||||||||||     
T  19876182 tattaaaactagattgtcggggtggcaaagttgttttctatctttcgggggtcgcttggttcttcttaagtctgtcctgacttcgcttcctgtctatgca 19876083  T
Q  317 ctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaatttcct 416  Q
    ||||||||||||||| |||||||||||||||| ||| ||||||||||| | |||||||||       || |||| |||||||||||||||||||||||||    
T  19876082 ctttccttcttcaaatctccgtcaggtataatttctctcattgaatctttgtttaataaatttttttggcgaggtagtgaggataacaggaaaatttcct 19875983  T
Q  417 gggtcgcttggaactctgtttgtttacgaaaggagtatggagg 459  Q
    || ||||||||| |||||||||||||  |||||||| ||||||    
T  19875982 ggatcgcttggagctctgtttgtttaaaaaaggagtttggagg 19875940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 131 - 504
Target Start/End: Complemental strand, 55367634 - 55367262
Alignment:
Q  131 gttggtaaagttccgtttctgtatctgggtctttctattggtggtgatccgaagaggttagccttttgggaacctgtgttgaagactgtaaagtctagat 230  Q
    |||||||| ||||| ||| ||||||| || || || ||||||||||| ||   ||   |||| |||||||| ||||||||| | ||  | || |||||||    
T  55367634 gttggtaaggttccttttttgtatcttggcctatcgattggtggtgaccctcggaaactagcattttgggaccctgtgttgcataccattaaatctagat 55367535  T
Q  231 tatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaa 330  Q
    | || |||||||| ||||| |||||||| || || || || |||||| |  ||||||||||| || |||| |||| |||||| || |||||||| |||||    
T  55367534 tgtccgggtggcagagtcgttttctctcattcggaggccgattggttttgatcaagtctgtcctgtcctctttgcttgtctacgctctttcctttttcaa 55367435  T
Q  331 agctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaatttcctgggtcgcttggaac 430  Q
    |||| |||||||||||||||||  ||| |||||| | ||||| |         |||||||||||||||| |||||||||||||||||| ||||||||||     
T  55367434 agctgcgtcaggtataatctcttccatagaatctttgtttaaaatgtttttttggggagggagtgaggacaacaggaaaatttcctggatcgcttggaat 55367335  T
Q  431 tctgtttgtttacgaaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgttagg 504  Q
    | | |||||| ||||||||||||||| |||||||| |||||  || ||| ||| ||||||  ||| ||||||||    
T  55367334 tatatttgttcacgaaaggagtatgg-gggttgggggtgaggaagttgaaggaatttaatcttgcgttgttagg 55367262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 224 - 465
Target Start/End: Complemental strand, 14309511 - 14309263
Alignment:
Q  224 tctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttcct 323  Q
    ||||||||  |||||||||||||||||||| | ||||| ||||| || || ||||| ||||| |||||| |||||||  | | ||||||||| |||||||    
T  14309511 tctagattggcggggtggcaaagtcgctttttatctttcgggggccgattagttctcctcaaatctgtcctgacctcgcttcttgtctatgctctttcct 14309412  T
Q  324 tcttcaaagctccgtcaggtataatctctgtcattgaatctatt------tttaataa-annnnnnnggggagggagtgaggataacaggaaaatttcct 416  Q
    |||||| ||||||||||||||| || ||| | ||||||||||||      |||  |||         |||||||||||||||||||||||||||||||||    
T  14309411 tcttcatagctccgtcaggtatcatttctcttattgaatctattaatctattttttaatttttttttggggagggagtgaggataacaggaaaatttcct 14309312  T
Q  417 gggtcgcttggaactctgtttgtttacgaaaggagtatggagggttggg 465  Q
     | | ||||||| |||| ||||||||| |||||||||||||||||||||    
T  14309311 agattgcttggagctctatttgtttacaaaaggagtatggagggttggg 14309263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 224 - 376
Target Start/End: Complemental strand, 2365210 - 2365058
Alignment:
Q  224 tctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttcct 323  Q
    |||||||| || || ||||||||||| || || ||||| || ||||| ||| ||||||| ||||||||| ||||  |  | ||||||||||| |||||||    
T  2365210 tctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattcttctaaagtctgtcctgactgctctacctgtctatgcactttcct 2365111  T
Q  324 tcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaa 376  Q
    |||||||||||||| ||||||||||||||  |||||||||| | |||||||||    
T  2365110 tcttcaaagctccgacaggtataatctcttccattgaatctttgtttaataaa 2365058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 224 - 351
Target Start/End: Original strand, 6175685 - 6175812
Alignment:
Q  224 tctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttcct 323  Q
    |||||| | ||||| ||| | ||||| |||||||||||||| ||||| |||||||| ||||| ||||||||||| ||  ||||||||||||| |||||||    
T  6175685 tctagactgtcgggttggaatagtcggtttctctcttttggtggtcgcttggttctactcaaatctgtcttgacatctctgcctgtctatgcactttcct 6175784  T
Q  324 tcttcaaagctccgtcaggtataatctc 351  Q
    |||||||| ||||  |||||||||||||    
T  6175785 tcttcaaaactccaacaggtataatctc 6175812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 225 - 364
Target Start/End: Original strand, 962372 - 962511
Alignment:
Q  225 ctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttcctt 324  Q
    ||||||| || || ||||| ||||| || || |||||||| || |||||| | |||||||| |||||| ||||  || | ||||||||||| ||||||||    
T  962372 ctagattgtctggttggcatagtcggttcctttcttttggtggccggttgatccttctcaaatctgtcctgactgcacttcctgtctatgctctttcctt 962471  T
Q  325 cttcaaagctccgtcaggtataatctctgtcattgaatct 364  Q
     |||||||||||||||||||||||||||  ||||||||||    
T  962472 tttcaaagctccgtcaggtataatctcttccattgaatct 962511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 243 - 372
Target Start/End: Original strand, 17270969 - 17271098
Alignment:
Q  243 aaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcagg 342  Q
    ||||||| |||||||||||||||||||| ||| || |||| ||||||||| |||||||  | | |||||| || |||| ||| ||||||| || ||||||    
T  17270969 aaagtcgttttctctcttttgggggtcgtttgatttttctgaagtctgtcctgacctctcttcatgtctacgctcttttctttttcaaagttctgtcagg 17271068  T
Q  343 tataatctctgtcattgaatctatttttaa 372  Q
    |||||||| |  ||||||||||||||||||    
T  17271069 tataatctgttccattgaatctatttttaa 17271098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 219 - 364
Target Start/End: Original strand, 48569226 - 48569371
Alignment:
Q  219 taaagtctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccct 318  Q
    |||| |||||||| || || ||||| ||||| || || |||||||| ||||| ||| |||||||||| || ||| ||||  || | ||||||||||| ||    
T  48569226 taaaatctagattgtctggttggcatagtcggttcctttcttttggtggtcgtttgattcttctcaaatccgtcctgactgcacttcctgtctatgcact 48569325  T
Q  319 ttccttcttcaaagctccgtcaggtataatctctgtcattgaatct 364  Q
    |||||| ||||||||||| |||||||||||||||  ||||||||||    
T  48569326 ttcctttttcaaagctccatcaggtataatctcttccattgaatct 48569371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 224 - 376
Target Start/End: Original strand, 34332023 - 34332175
Alignment:
Q  224 tctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttcct 323  Q
    |||||||| || || ||||||||||| || || ||||| || ||||| ||| |||| || ||||||||| ||||  |  | ||||||||||| |||||||    
T  34332023 tctagattgtctggttggcaaagtcggttcctttctttcggtggtcgtttgattctactaaagtctgtcctgactgctctacctgtctatgcactttcct 34332122  T
Q  324 tcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaa 376  Q
    | || ||||||||||||||||||||||||  |||||||||| | |||||||||    
T  34332123 tttttaaagctccgtcaggtataatctcttccattgaatctttgtttaataaa 34332175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 224 - 420
Target Start/End: Original strand, 19919437 - 19919633
Alignment:
Q  224 tctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttcct 323  Q
    |||||||| || || ||||||||||| ||||| ||||| || ||||| ||| |||| || ||||  ||| | ||  |  | ||||||||||| |||||||    
T  19919437 tctagattgtctggttggcaaagtcggtttctatctttcggtggtcgtttgattctactaaagttcgtcctaactgctctacctgtctatgcactttcct 19919536  T
Q  324 tcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaatttcctgggt 420  Q
    |||||||||||||| ||||||||||||||  |||||||||| | |||||||||       |||||||||||||||| || || ||||| || |||||    
T  19919537 tcttcaaagctccgacaggtataatctcttccattgaatctttgtttaataaatttttttggggagggagtgaggaaaaaagaaaaatatcttgggt 19919633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 257 - 411
Target Start/End: Original strand, 43120915 - 43121069
Alignment:
Q  257 tcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtca 356  Q
    |||||||| |||||  |||||||| | || |||||| |||||||  || ||||||||||  ||||||||||||||||||| | |||||||||||||  ||    
T  43120915 tcttttggcggtcgcctggttcttttaaaatctgtcctgacctctctgtctgtctatgcgttttccttcttcaaagctccattaggtataatctcttcca 43121014  T
Q  357 ttgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaat 411  Q
    |||||||| | |||||||||       |||| |||||||||||| | ||||||||    
T  43121015 ttgaatctttgtttaataaatttttttggggtgggagtgaggatcataggaaaat 43121069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 257 - 364
Target Start/End: Complemental strand, 23819464 - 23819357
Alignment:
Q  257 tcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtca 356  Q
    |||||||| |||||  |||||||  | ||||||||| |||||||  ||||||| ||||| |||||||||||||||||||| ||| |||||||||||  ||    
T  23819464 tcttttggtggtcgcatggttctcttaaagtctgtcctgacctctctgcctgtatatgcgctttccttcttcaaagctccatcaagtataatctcttcca 23819365  T
Q  357 ttgaatct 364  Q
    ||||||||    
T  23819364 ttgaatct 23819357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 239 - 369
Target Start/End: Complemental strand, 8130890 - 8130760
Alignment:
Q  239 tggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgt 338  Q
    ||||||||||| ||||| || ||||| ||||| ||| ||||||| ||||||||||||||| |    || |||||||| |||||||||||||| |||||      
T  8130890 tggcaaagtcgatttctttcatttggaggtcgcttgattcttctaaagtctgtcttgaccgcgcaaccggtctatgctctttccttcttcaaggctccag 8130791  T
Q  339 caggtataatctctgtcattgaatctatttt 369  Q
    |||||| |||||||  ||| |||||||||||    
T  8130790 caggtagaatctcttccatagaatctatttt 8130760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 305 - 375
Target Start/End: Original strand, 52907331 - 52907401
Alignment:
Q  305 cctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataa 375  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||   ||||||||||| ||||||||    
T  52907331 cctgtttatgccctttccttcttcaaagctccatcaggtataatctcttctattgaatctatgtttaataa 52907401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 269 - 370
Target Start/End: Original strand, 16672274 - 16672375
Alignment:
Q  269 cggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctattt 368  Q
    ||||| ||||| || |||||||||||||||||  | ||||||||||  |||||||||||||| ||||||||||||||||| |||  | |||| |||||||    
T  16672274 cggttagttctcctaaagtctgtcttgacctctctacctgtctatgttctttccttcttcaaggctccgtcaggtataatttcttcccttgattctattt 16672373  T
Q  369 tt 370  Q
    ||    
T  16672374 tt 16672375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 305 - 454
Target Start/End: Complemental strand, 18381899 - 18381752
Alignment:
Q  305 cctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataaca 404  Q
    |||||||||||  ||||||| ||||||||||| ||||||||||| |||  ||||||||||||||| | |           ||| |||||||||||||| |    
T  18381899 cctgtctatgctatttcctttttcaaagctccatcaggtataatatcttccattgaatctattttgattt--ttttttttgggtgggagtgaggataata 18381802  T
Q  405 ggaaaatttcctgggtcgcttggaactctgtttgtttacgaaaggagtat 454  Q
    |||||||||||||| ||||||||| || ||||||||  ||||||||||||    
T  18381801 ggaaaatttcctggatcgcttggagctatgtttgttctcgaaaggagtat 18381752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 251 - 364
Target Start/End: Original strand, 24925920 - 24926033
Alignment:
Q  251 tttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatct 350  Q
    |||||||||||||| ||||| ||| | || || || || || ||||| ||  ||||||||||||| ||||| |||||||||||||| |||||||||||||    
T  24925920 tttctctcttttggcggtcgcttgatcctccttaaatcggttttgacttctctgcctgtctatgcactttctttcttcaaagctccatcaggtataatct 24926019  T
Q  351 ctgtcattgaatct 364  Q
    ||  ||||||||||    
T  24926020 cttccattgaatct 24926033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 272 - 364
Target Start/End: Original strand, 46907926 - 46908018
Alignment:
Q  272 ttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatct 364  Q
    ||||||||| | ||||||||  |||||||  ||||| ||||||| |||||||||||||||||||| ||| |||||||||||  ||||||||||    
T  46907926 ttggttcttttaaagtctgttctgacctctctgcctatctatgctctttccttcttcaaagctccatcaagtataatctcttccattgaatct 46908018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 260 - 348
Target Start/End: Original strand, 52250369 - 52250457
Alignment:
Q  260 tttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataat 348  Q
    ||||||||  |||| ||||| || |||| ||||||||||||  | ||||||||||| |||||||||||||| |||||||||||||||||    
T  52250369 tttgggggcaggttagttctcctaaagtttgtcttgacctctctacctgtctatgcgctttccttcttcaaggctccgtcaggtataat 52250457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 273 - 375
Target Start/End: Complemental strand, 50545126 - 50545024
Alignment:
Q  273 tggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaa 372  Q
    |||||||| | ||||||||| |||||||  | || ||||||||  ||||||||||||||| ||| |||||||||||||||  |||||||||| | |||||    
T  50545126 tggttcttttaaagtctgtcctgacctctctacccgtctatgcgttttccttcttcaaaggtccatcaggtataatctcttccattgaatctttatttaa 50545027  T
Q  373 taa 375  Q
    |||    
T  50545026 taa 50545024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 309 - 411
Target Start/End: Complemental strand, 36731740 - 36731638
Alignment:
Q  309 tctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaa 408  Q
    ||||||| |||||||| |||||||||||||||||||||||||||  |||||||||| | || ||||||       |||| || ||||||||||| |||||    
T  36731740 tctatgctctttcctttttcaaagctccgtcaggtataatctcttccattgaatctttgttaaataaatttttgggggggggaagtgaggataataggaa 36731641  T
Q  409 aat 411  Q
    |||    
T  36731640 aat 36731638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 364
Target Start/End: Complemental strand, 16179791 - 16179732
Alignment:
Q  305 cctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatct 364  Q
    ||||||||||| |||||||| |||||||||| ||||||||||||||||  ||||||||||    
T  16179791 cctgtctatgcactttcctttttcaaagctctgtcaggtataatctcttccattgaatct 16179732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 302 - 364
Target Start/End: Original strand, 14863742 - 14863804
Alignment:
Q  302 ttgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatct 364  Q
    |||||||||||||| ||||||||||| |||||||| | |||||||||||||  ||||||||||    
T  14863742 ttgcctgtctatgctctttccttctttaaagctccattaggtataatctcttccattgaatct 14863804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 302 - 364
Target Start/End: Original strand, 21739774 - 21739836
Alignment:
Q  302 ttgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatct 364  Q
    |||||||||||||| ||||||||||| |||||||| |||| ||||||||||  ||||||||||    
T  21739774 ttgcctgtctatgctctttccttctttaaagctccatcagttataatctcttccattgaatct 21739836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 287 - 373
Target Start/End: Original strand, 30166594 - 30166680
Alignment:
Q  287 tctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaat 373  Q
    ||||||||||| ||  | ||||||||||||||||| |||||||||||||| ||||||||||| |||  | |||||||| | ||||||    
T  30166594 tctgtcttgacttctctacctgtctatgccctttctttcttcaaagctccatcaggtataatttcttcccttgaatctttatttaat 30166680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 257 - 351
Target Start/End: Complemental strand, 44888803 - 44888709
Alignment:
Q  257 tcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctc 351  Q
    |||||||| |||||  ||||||| || |||||||||||| ||||  | |||||||||||  |||||||||||| ||| || ||||||||||||||    
T  44888803 tcttttggtggtcgtctggttctccttaagtctgtcttgtcctctcttcctgtctatgctttttccttcttcagagcaccatcaggtataatctc 44888709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 501
Target Start/End: Original strand, 12341458 - 12341740
Alignment:
Q  219 taaagtctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccct 318  Q
    ||||||||||||| || || ||||| ||| | |  || || ||||| ||||| ||| | |||||||| |||||||||||  |  | ||||||||| | ||    
T  12341458 taaagtctagattgtctggttggcatagtaggtacctttcctttggtggtcgcttgatacttctcaaatctgtcttgactgcgcttcctgtctatacact 12341557  T
Q  319 ttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaatttcctgg 418  Q
    |||||| || ||||||||||| ||||||||||||   ||||||||| | || ||||||       |||| ||  |||||||||| || || ||||| |||    
T  12341558 ttccttttttaaagctccgtcgggtataatctcttctattgaatctttgttaaataaatttttttgggggggttgtgaggataaaagaaagatttcttgg 12341657  T
Q  419 gtcgcttggaactctgtttgtttacgaaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgtt 501  Q
    || | |||||  ||| | |||||  | | |||||||||||||||||| |||||   | |||| |||||||| | |||||||||    
T  12341658 gttggttggagttctttgtgtttgaggagggagtatggagggttgggtgtgaggaggttgagagagtttaacattgctttgtt 12341740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 307 - 364
Target Start/End: Original strand, 15481049 - 15481106
Alignment:
Q  307 tgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatct 364  Q
    ||||||||| ||||| |||||||||||||| |||||||||||||||  ||||||||||    
T  15481049 tgtctatgctctttctttcttcaaagctccatcaggtataatctcttccattgaatct 15481106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 307 - 364
Target Start/End: Original strand, 17077588 - 17077645
Alignment:
Q  307 tgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatct 364  Q
    ||||||||| |||||||| |||||||||| ||||||||||||||||  ||||||||||    
T  17077588 tgtctatgcactttcctttttcaaagctctgtcaggtataatctcttccattgaatct 17077645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 251 - 364
Target Start/End: Original strand, 42674673 - 42674786
Alignment:
Q  251 tttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatct 350  Q
    |||||||||||||| || || ||| |||| ||||| || ||  |||| ||  ||||||||||||| ||||| ||||||||||||||  ||||| ||||||    
T  42674673 tttctctcttttggtggccgcttgattctcctcaaatcagttctgacatctctgcctgtctatgctctttctttcttcaaagctccaacaggtgtaatct 42674772  T
Q  351 ctgtcattgaatct 364  Q
    ||  ||||||||||    
T  42674773 cttccattgaatct 42674786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 348
Target Start/End: Complemental strand, 7164384 - 7164296
Alignment:
Q  260 tttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataat 348  Q
    ||||| |||||||| |||||||| |||| ||||||||||||  | ||| | ||||| |||||||||||||  ||||| |||||||||||    
T  7164384 tttggtggtcggttagttcttctaaagtttgtcttgacctctcttcctatttatgctctttccttcttcagggctccatcaggtataat 7164296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 445 - 508
Target Start/End: Original strand, 30166773 - 30166836
Alignment:
Q  445 aaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgttaggtaaa 508  Q
    ||||||| ||||||| ||||| ||||| ||| ||| ||| ||||||||||||||||||||||||    
T  30166773 aaaggagaatggaggtttgggggtgaggcagttgaaggaatttaatagtgctttgttaggtaaa 30166836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 284 - 370
Target Start/End: Complemental strand, 6825684 - 6825598
Alignment:
Q  284 aagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctattttt 370  Q
    ||||| ||||||||||   | ||||||||||| |||||||||||||| ||||||||| ||||||| |||  | |||| |||||||||    
T  6825684 aagtccgtcttgacctttctacctgtctatgctctttccttcttcaaggctccgtcaagtataatttcttcccttgattctattttt 6825598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 345
Target Start/End: Original strand, 8948278 - 8948348
Alignment:
Q  275 gttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtat 345  Q
    |||||||| |||| |||| |||||||  | |||||||||||  ||||||||||||||||||| ||||||||    
T  8948278 gttcttcttaagtttgtcctgacctctctccctgtctatgctatttccttcttcaaagctccctcaggtat 8948348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 471
Target Start/End: Original strand, 20356787 - 20356865
Alignment:
Q  393 gtgaggataacaggaaaatttcctgggtcgcttggaactctgtttgtttacgaaaggagtatggagggttgggagtgag 471  Q
    |||||||||  |||||||| || ||||| | |||| ||||||| ||||||| ||||||| ||||||||||||| |||||    
T  20356787 gtgaggatattaggaaaatctcatgggttgattgggactctgtgtgtttaccaaaggaggatggagggttgggtgtgag 20356865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 302 - 363
Target Start/End: Complemental strand, 10868498 - 10868437
Alignment:
Q  302 ttgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatc 363  Q
    |||||||| ||||| ||||||||||| |||||||  |||||||||||||||  |||||||||    
T  10868498 ttgcctgtatatgctctttccttctttaaagctctatcaggtataatctcttccattgaatc 10868437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 303 - 364
Target Start/End: Complemental strand, 36709762 - 36709701
Alignment:
Q  303 tgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatct 364  Q
    |||||||| |||| ||||| ||||||||||||||  ||||||||||||||  ||||||||||    
T  36709762 tgcctgtcgatgctctttctttcttcaaagctccaacaggtataatctcttccattgaatct 36709701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 305 - 370
Target Start/End: Complemental strand, 48930577 - 48930512
Alignment:
Q  305 cctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctattttt 370  Q
    ||||||||||| ||| |||||||||| ||||||||||||||||| |||  | |||| |||||||||    
T  48930577 cctgtctatgctcttaccttcttcaaggctccgtcaggtataatttcttcccttgattctattttt 48930512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 276 - 364
Target Start/End: Complemental strand, 19891557 - 19891469
Alignment:
Q  276 ttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatct 364  Q
    |||| ||||| |||||||||||  |  | ||||| ||||  |||||||| ||||||||||||||||||||||| |||  ||||||||||    
T  19891557 ttctactcaaatctgtcttgactgcgcttcctgtttatgaactttcctttttcaaagctccgtcaggtataatatcttccattgaatct 19891469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 307 - 508
Target Start/End: Original strand, 22734014 - 22734215
Alignment:
Q  307 tgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacagg 406  Q
    ||||||||| || | ||||||||| ||||| ||| |||||||||||  |||||||||||| || |||||         ||| |||||||||||| | |||    
T  22734014 tgtctatgctctgttcttcttcaaggctccatcatgtataatctcttccattgaatctatattgaataatttttttttgggggggagtgaggatcatagg 22734113  T
Q  407 aaaatttcctgggtcgcttggaactctgtttgtttacgaaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgttaggta 506  Q
    ||||| || ||| |   ||||||   ||||||||| || |||||||||||||| ||||  |||||  || | ||||| ||||||| ||||||  ||||||    
T  22734114 aaaatatcttggttacgttggaatattgtttgtttgcgtaaggagtatggaggattggaggtgaggaagttaagggaatttaatattgctttactaggta 22734213  T
Q  507 aa 508  Q
    ||    
T  22734214 aa 22734215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 90 - 182
Target Start/End: Complemental strand, 44888970 - 44888878
Alignment:
Q  90 attcatggttgaatgaagcagcctctattttaaattgcaaagttggtaaagttccgtttctgtatctgggtctttctattggtggtgatccga 182  Q
    |||| ||||||||||||||||| |||||  |   ||| ||||| || || ||||| ||| ||||| |||||||||| ||||||||||||||||    
T  44888970 attcttggttgaatgaagcagcgtctatgcttggttgtaaagtgggaaaggttccctttttgtatttgggtctttcgattggtggtgatccga 44888878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 47538135 - 47538071
Alignment:
Q  288 ctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctct 352  Q
    ||||| |||||||  | ||||||||||| ||||||||||||||| |||| |||| ||||||||||    
T  47538135 ctgtcctgacctctctacctgtctatgcgctttccttcttcaaaactccatcagatataatctct 47538071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 275 - 373
Target Start/End: Complemental strand, 17914547 - 17914449
Alignment:
Q  275 gttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaat 373  Q
    |||||||| |||||||||||| ||||  | || ||||||   ||||||||||||||||||||  ||||||| || ||    ||||||||||||||||||    
T  17914547 gttcttcttaagtctgtcttgtcctctcttccggtctattttctttccttcttcaaagctcccgcaggtatcatttcctctattgaatctatttttaat 17914449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 30166339 - 30166392
Alignment:
Q  32 atgtctggtttgcgagtgaattttcataagagtatgttggttggaattaatatt 85  Q
    |||||||| |||  |||||||||| |||||||| ||||||| ||||||||||||    
T  30166339 atgtctgggttgaaagtgaattttaataagagtttgttggtgggaattaatatt 30166392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 20797958 - 20797918
Alignment:
Q  305 cctgtctatgccctttccttcttcaaagctccgtcaggtat 345  Q
    |||||||||||  ||||||||||||||||||| ||||||||    
T  20797958 cctgtctatgctttttccttcttcaaagctccctcaggtat 20797918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 166; Significance: 1e-88; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 120 - 494
Target Start/End: Complemental strand, 380937 - 380563
Alignment:
Q  120 taaattgcaaagttggtaaagttccgtttctgtatctgggtctttctattggtggtgatccgaagaggttagccttttgggaacctgtgttgaagactgt 219  Q
    ||||||| ||||| ||||||| ||| ||  |||||||||| ||||||||||| |||||| ||| ||||||||| |||||||| |||||||||||  |  |    
T  380937 taaattgtaaagtgggtaaagctcctttcgtgtatctgggcctttctattggaggtgattcgaggaggttagcattttgggatcctgtgttgaaatccat 380838  T
Q  220 aaagtctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctt 319  Q
     ||||||||||| ||||||||||||||||| |||||||||||| |||| |||||||||||||| |||| ||||||||||||  ||| ||||||||| |||    
T  380837 taagtctagattgtcggggtggcaaagtcgttttctctcttttaggggccggttggttcttctaaagtttgtcttgacctctctgcatgtctatgctctt 380738  T
Q  320 tccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaatttcctggg 419  Q
    ||||||||||||||| | |||||||| || ||| ||||||||||||||||||||||        ||||||||||  |||| |||||||||||||||||||    
T  380737 tccttcttcaaagcttcatcaggtatcatttctatcattgaatctatttttaataattttttttggggagggagcaaggagaacaggaaaatttcctggg 380638  T
Q  420 tcgcttggaactctgtttgtttacgaaaggagtatggagggttgggagtgagacagctgagggagtttaatagtg 494  Q
    | ||||||| |||| | |||||| | |||||||||||||| ||||| || || ||| ||||||||||||||||||    
T  380637 ttgcttggagctctatctgtttatgtaaggagtatggaggtttgggggtcaggcagttgagggagtttaatagtg 380563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 245 - 508
Target Start/End: Complemental strand, 42260193 - 42259928
Alignment:
Q  245 agtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggta 344  Q
    ||||||||||| || ||||| || || ||| |||||||||||||||||||||||||  | |||||||| || |||||||||||||||||||| |||| ||    
T  42260193 agtcgctttctatcatttggaggccgtttgattcttctcaagtctgtcttgacctcgcttcctgtctacgctctttccttcttcaaagctccatcagata 42260094  T
Q  345 taatctctgtcattgaatctatttttaataaannnnnnn--ggggagggagtgaggataacaggaaaatttcctgggtcgcttggaactctgtttgttta 442  Q
    |||||| |  ||||||| || | ||||| |||         |||||||||||||||||||| |||||||||||||| | ||||||| ||||| |||||||    
T  42260093 taatcttttccattgaaactttatttaaaaaaaaaaaaattggggagggagtgaggataactggaaaatttcctggattgcttggagctctgcttgttta 42259994  T
Q  443 cgaaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgttaggtaaa 508  Q
     | ||||||||||||||  |||| ||||||||| ||  | |||||||||  || ||||||||||||    
T  42259993 ggtaaggagtatggaggtctgggggtgagacagttggcgaagtttaatatagccttgttaggtaaa 42259928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 245 - 375
Target Start/End: Original strand, 22094478 - 22094608
Alignment:
Q  245 agtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggta 344  Q
    ||||| || ||||||||||| || |  ||||||||||||||  |||||||||| || |||||||||||||| ||||||||||||||||||||||||||||    
T  22094478 agtcgtttcctctcttttggtggccatttggttcttctcaaagctgtcttgacttctttgcctgtctatgctctttccttcttcaaagctccgtcaggta 22094577  T
Q  345 taatctctgtcattgaatctatttttaataa 375  Q
    ||||||||| |||||||||| | ||||||||    
T  22094578 taatctctgccattgaatctttatttaataa 22094608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 306 - 504
Target Start/End: Original strand, 26261608 - 26261805
Alignment:
Q  306 ctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacag 405  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||   ||||||| |||||| |||||        |||| |||||||||||| | ||    
T  26261608 ctgtctatgctctttccttcttcaaagctccttcaggtataatctcttctattgaatttattttgaataa-tttttttggggtgggagtgaggatcatag 26261706  T
Q  406 gaaaatttcctgggtcgcttggaactctgtttgtttacgaaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgttagg 504  Q
    ||||||||| ||| | | ||||||  ||||||||||| |||| ||||||||| ||||||| || || ||| ||||||||||||| |  |||||||||||    
T  26261707 gaaaatttcttggattggttggaaaactgtttgtttaagaaaagagtatggatggttgggggtaaggcagatgagggagtttaacaccgctttgttagg 26261805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 224 - 376
Target Start/End: Complemental strand, 42514652 - 42514500
Alignment:
Q  224 tctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttcct 323  Q
    |||||||| || || ||||||||||| || || ||||| || ||||| ||| ||||||| ||||||||| ||||  |  | ||||||||||| |||||||    
T  42514652 tctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattcttctaaagtctgtcctgactgctctacctgtctatgcactttcct 42514553  T
Q  324 tcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaa 376  Q
    |||||||||||||| ||||||||||||||  |||||||||| | |||||||||    
T  42514552 tcttcaaagctccgacaggtataatctcttccattgaatctttgtttaataaa 42514500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 226 - 414
Target Start/End: Original strand, 28534886 - 28535074
Alignment:
Q  226 tagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttc 325  Q
    |||||| || || ||||||||||| || || |||||||| ||||| ||| ||||||| ||||| ||| ||||  |  | ||||||||||| ||||||||     
T  28534886 tagattgtcaggttggcaaagtcggttcctttcttttggtggtcgtttgattcttcttaagtccgtcctgactgctctacctgtctatgcactttccttt 28534985  T
Q  326 ttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaatttc 414  Q
    |||||||||||||||||||||||||||  |||||||||| | |||||||||       | |||||| |||||||||| || ||||||||    
T  28534986 ttcaaagctccgtcaggtataatctcttccattgaatctttgtttaataaatttttttgaggagggggtgaggataaaagaaaaatttc 28535074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 260 - 371
Target Start/End: Complemental strand, 21084777 - 21084666
Alignment:
Q  260 tttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattg 359  Q
    ||||| |||||||| || ||||| |||||||||||||||||  | ||||||||||| |||||||||||||| ||||||||||||||||| |||  | |||    
T  21084777 tttggtggtcggttagtccttctaaagtctgtcttgacctctctacctgtctatgctctttccttcttcaaggctccgtcaggtataatttcttcccttg 21084678  T
Q  360 aatctattttta 371  Q
    | ||||||||||    
T  21084677 attctattttta 21084666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 224 - 376
Target Start/End: Complemental strand, 23239315 - 23239163
Alignment:
Q  224 tctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttcct 323  Q
    |||||||| || || ||||||||||| || || ||||| || ||||| | | ||||||| ||||| ||| ||||  |  | ||||||||||| |||||||    
T  23239315 tctagattgtctggttggcaaagtcggttcctttctttcggtggtcgttcgattcttctaaagtccgtcctgactgctctacctgtctatgcactttcct 23239216  T
Q  324 tcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaa 376  Q
    | |||||||||||||||||||||||||||  |||||||||| | |||||||||    
T  23239215 ttttcaaagctccgtcaggtataatctcttccattgaatctttgtttaataaa 23239163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 224 - 420
Target Start/End: Original strand, 30731522 - 30731718
Alignment:
Q  224 tctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttcct 323  Q
    |||||||| || || ||| ||||||| || || ||||| || ||||| ||| |||| || ||||| ||| ||||  |  | ||||||||||| |||||||    
T  30731522 tctagattgtctggttggaaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctctacctgtctatgcactttcct 30731621  T
Q  324 tcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaatttcctgggt 420  Q
    |||||||||||||| ||||||||||||||  |||||||||| | |||||||||       |||||||||||||||| || || ||||| || |||||    
T  30731622 tcttcaaagctccgacaggtataatctcttccattgaatctttgtttaataaatttttttggggagggagtgaggaaaaaagaaaaatatcttgggt 30731718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 224 - 375
Target Start/End: Original strand, 30509231 - 30509382
Alignment:
Q  224 tctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttcct 323  Q
    |||||||| ||||||||| | || || |||||||||||||| ||||| ||| | ||||| ||  | || ||||| ||  ||||||||||||| |||||||    
T  30509231 tctagattgtcggggtggaatagccggtttctctcttttggtggtcgcttgatccttctgaaagccgtgttgacttctctgcctgtctatgctctttcct 30509330  T
Q  324 tcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataa 375  Q
    |||| ||||||||  ||||||||||||||  |||||| ||| | ||||||||    
T  30509331 tctttaaagctccaacaggtataatctcttccattgattctttgtttaataa 30509382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 224 - 375
Target Start/End: Original strand, 30549574 - 30549725
Alignment:
Q  224 tctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttcct 323  Q
    |||||||| ||||||||| | || || |||||||||||||| ||||| ||| | ||||| ||  | || ||||| ||  ||||||||||||| |||||||    
T  30549574 tctagattgtcggggtggaatagccggtttctctcttttggtggtcgcttgatccttctgaaagccgtgttgacttctctgcctgtctatgctctttcct 30549673  T
Q  324 tcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataa 375  Q
    |||| ||||||||  ||||||||||||||  |||||| ||| | ||||||||    
T  30549674 tctttaaagctccaacaggtataatctcttccattgattctttgtttaataa 30549725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 225 - 504
Target Start/End: Complemental strand, 33170589 - 33170310
Alignment:
Q  225 ctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttcctt 324  Q
    ||||||| || || ||||| ||||| || || |||||||| |  |||||| | |||||||| | |||| ||||  || | ||||||||||| ||||||||    
T  33170589 ctagattgtctggttggcatagtcggttcctttcttttggtgaccggttgatccttctcaaatttgtcctgactgcactacctgtctatgctctttcctt 33170490  T
Q  325 cttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaatttcctgggtcgct 424  Q
     ||||||||||||||||||||||||| |  |||||||||| | || ||||||       |||| || ||||||||||| || |||||  | ||| |   |    
T  33170489 tttcaaagctccgtcaggtataatctattccattgaatctttgttaaataaatttttttgggggggaagtgaggataaaagaaaaataacgtggattagt 33170390  T
Q  425 tggaactctgtttgtttacgaaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgttagg 504  Q
    ||||| ||| | |||||  | ||||||||||||||| |||| || ||     ||||||||||||||| ||||||||||||    
T  33170389 tggaattctttatgtttgaggaaggagtatggagggatgggtgttaggagtttgagggagtttaatattgctttgttagg 33170310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 239 - 369
Target Start/End: Complemental strand, 36256692 - 36256562
Alignment:
Q  239 tggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgt 338  Q
    ||||||||||| ||||| |||||||| ||||| ||| ||||| | ||||||||||||||| |  | ||||||||||| |||||||||||||| |||||      
T  36256692 tggcaaagtcggtttctttcttttggaggtcgcttgattcttttaaagtctgtcttgaccgcgctacctgtctatgctctttccttcttcaaggctccaa 36256593  T
Q  339 caggtataatctctgtcattgaatctatttt 369  Q
    |||||  |||||||  ||| || ||||||||    
T  36256592 caggtgcaatctcttccatagattctatttt 36256562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 251 - 364
Target Start/End: Complemental strand, 588412 - 588299
Alignment:
Q  251 tttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatct 350  Q
    ||||||||||| || || || ||||| ||||| || ||||||||||||||  ||||||||||||| ||||  |||||||||||||| | | |||||||||    
T  588412 tttctctctttcggtggccgcttggtacttctaaaatctgtcttgacctctctgcctgtctatgctctttgtttcttcaaagctccattatgtataatct 588313  T
Q  351 ctgtcattgaatct 364  Q
    ||  ||||||||||    
T  588312 cttccattgaatct 588299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 273 - 411
Target Start/End: Original strand, 20207977 - 20208115
Alignment:
Q  273 tggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaa 372  Q
    |||||||| | ||||||||| | |||||  ||||||||||||| |||||||||||||||||||| ||| |||||||||||  |||| | ||| || |||     
T  20207977 tggttcttttaaagtctgtcctaacctctctgcctgtctatgcgctttccttcttcaaagctccatcatgtataatctcttccattaattctcttcttat 20208076  T
Q  373 taaannnnnnnggggagggagtgaggataacaggaaaat 411  Q
    ||||       |||| |||||||||||||| ||||||||    
T  20208077 taaatttttttggggtgggagtgaggataataggaaaat 20208115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 251 - 364
Target Start/End: Original strand, 35121923 - 35122036
Alignment:
Q  251 tttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatct 350  Q
    |||||||| ||||| ||||| ||| |||| || || || || ||||| ||  ||||||||||||| ||||||||||| |||||||| |||||||||||||    
T  35121923 tttctctcgtttggtggtcgcttgattctcctaaaatcagttttgacttctctgcctgtctatgctctttccttctttaaagctccttcaggtataatct 35122022  T
Q  351 ctgtcattgaatct 364  Q
    ||  ||||||||||    
T  35122023 cttccattgaatct 35122036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 402
Target Start/End: Original strand, 35983036 - 35983177
Alignment:
Q  261 ttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattga 360  Q
    |||| ||||| ||| ||||||| ||||||||| ||||  |  | ||||||||||| |||||||| |||||||||| |||||||||||||| |  ||||||    
T  35983036 ttggtggtcgtttgattcttcttaagtctgtcctgactgctctacctgtctatgcactttcctttttcaaagctctgtcaggtataatcttttccattga 35983135  T
Q  361 atctatttttaataaannnnnnnggggagggagtgaggataa 402  Q
    |||| | |||||||||       |||||||| ||||||||||    
T  35983136 atctttgtttaataaaattttttggggagggggtgaggataa 35983177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 273 - 348
Target Start/End: Complemental strand, 6050123 - 6050048
Alignment:
Q  273 tggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataat 348  Q
    |||||||| | ||||||||  |||||||  ||||||||||||| |||||||||||||||||||| |||||||||||    
T  6050123 tggttcttttaaagtctgttctgacctcgctgcctgtctatgcgctttccttcttcaaagctccatcaggtataat 6050048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 305 - 376
Target Start/End: Original strand, 8299471 - 8299542
Alignment:
Q  305 cctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaa 376  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||   ||||||||| | |||||||||    
T  8299471 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctcttctattgaatctttgtttaataaa 8299542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 305 - 364
Target Start/End: Complemental strand, 27796335 - 27796276
Alignment:
Q  305 cctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatct 364  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||  ||||||||||    
T  27796335 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctcttccattgaatct 27796276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 275 - 370
Target Start/End: Complemental strand, 41590970 - 41590875
Alignment:
Q  275 gttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctattttt 370  Q
    ||||| || |||||||||||||||||  | ||||||||| | |||||||||||||| ||||||||||||||||| |||  | |||| |||||||||    
T  41590970 gttctcctaaagtctgtcttgacctctctacctgtctatactctttccttcttcaaggctccgtcaggtataatttcttcccttgattctattttt 41590875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 260 - 370
Target Start/End: Original strand, 4297553 - 4297663
Alignment:
Q  260 tttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattg 359  Q
    ||||| || ||||| ||||| || |||||| ||||||||||  | ||||||||||| ||||||||||||||  |||||||||||||||| |||  | |||    
T  4297553 tttggtggccggttagttctcctaaagtctatcttgacctctctacctgtctatgctctttccttcttcaagactccgtcaggtataatttcttcccttg 4297652  T
Q  360 aatctattttt 370  Q
    | |||||||||    
T  4297653 attctattttt 4297663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 307 - 501
Target Start/End: Complemental strand, 10781050 - 10780856
Alignment:
Q  307 tgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacagg 406  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||   ||||||||| | || ||||||       |||| ||  |||||||||| ||     
T  10781050 tgtctatgcactttcctttttcaaagctccgtcaggtataatctcttctattgaatctttgttaaataaatttttttgggggggttgtgaggataaaaga 10780951  T
Q  407 aaaatttcctgggtcgcttggaactctgtttgtttacgaaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgtt 501  Q
    || ||||| ||||| | |||||  ||| | |||||  | | |||||||||||||||||| |||||   | |||| |||||||| | |||||||||    
T  10780950 aagatttcttgggttggttggagttctttgtgtttgaggagggagtatggagggttgggtgtgaggaggttgagagagtttaacattgctttgtt 10780856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 219 - 352
Target Start/End: Original strand, 25856642 - 25856775
Alignment:
Q  219 taaagtctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccct 318  Q
    ||||||||||||| || || ||||| ||| | |  || || ||||| ||||| ||| |||| ||||| |||||||| ||  |  | ||||||||||| ||    
T  25856642 taaagtctagattgtctggttggcatagtaggtacctttcctttggtggtcgcttgattctgctcaaatctgtcttaactgcgattcctgtctatgcact 25856741  T
Q  319 ttccttcttcaaagctccgtcaggtataatctct 352  Q
    |||||| |||||||||||||||||||||||||||    
T  25856742 ttcctttttcaaagctccgtcaggtataatctct 25856775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 251 - 346
Target Start/End: Original strand, 10486137 - 10486232
Alignment:
Q  251 tttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtata 346  Q
    ||||| || ||||| || || ||||||||| | || ||||||||||| ||  |||||||||||||| |||| |||||||||||||| |||||||||    
T  10486137 tttctttcctttggaggacgtttggttcttttaaaatctgtcttgacttctctgcctgtctatgccatttctttcttcaaagctccatcaggtata 10486232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 373
Target Start/End: Original strand, 15861963 - 15862042
Alignment:
Q  294 tgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaat 373  Q
    |||||||||||||||||| ||| ||||| |||||||||| | |||||||||| ||||||  |||||||||| | ||||||    
T  15861963 tgacctcattgcctgtctgtgctctttctttcttcaaagattcgtcaggtattatctcttccattgaatctttatttaat 15862042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 266 - 352
Target Start/End: Complemental strand, 19838455 - 19838368
Alignment:
Q  266 ggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttc-aaagctccgtcaggtataatctct 352  Q
    ||||| ||| ||||||||||||||||| |||| || |||||||||||||  |||||||||||| ||||||| | |||||| |||||||    
T  19838455 ggtcgtttgattcttctcaagtctgtcctgacttctttgcctgtctatgttctttccttcttcaaaagctctgacaggtacaatctct 19838368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 278 - 441
Target Start/End: Original strand, 22174258 - 22174419
Alignment:
Q  278 cttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaan 377  Q
    |||||||| |||||| |||| ||| | |||||||||||  |||| |||||||| | ||| |||||||||||||||  |||||||||| |||||  | ||     
T  22174258 cttctcaaatctgtcatgacttcaattcctgtctatgc--tttctttcttcaaggttccatcaggtataatctcttccattgaatctctttttttttaaa 22174355  T
Q  378 nnnnnnggggagggagtgaggataacaggaaaatttcctgggtcgcttggaactctgtttgttt 441  Q
          || |||||||||||||||||| ||||||||| ||  | ||||||| | ||||||||||    
T  22174356 aaaattggcgagggagtgaggataacatgaaaatttcttgtattgcttggagcgctgtttgttt 22174419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 391 - 486
Target Start/End: Complemental strand, 35637899 - 35637805
Alignment:
Q  391 gagtgaggataacaggaaaatttcctgggtcgcttggaactctgtttgtttacgaaaggagtatggagggttgggagtgagacagctgagggagtt 486  Q
    |||||||||||| |||||||| || ||| ||||||||||  || ||||||||||||||||| ||||||| ||||| ||||| ||  ||||||||||    
T  35637899 gagtgaggataataggaaaatatcatggatcgcttggaatactatttgtttacgaaaggagcatggaggtttggg-gtgaggcaattgagggagtt 35637805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 302 - 364
Target Start/End: Complemental strand, 19506852 - 19506790
Alignment:
Q  302 ttgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatct 364  Q
    |||| ||||||||| ||||||||||| |||||||| |||||||||||||||  ||||||||||    
T  19506852 ttgcttgtctatgctctttccttctttaaagctccatcaggtataatctcttccattgaatct 19506790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 294 - 352
Target Start/End: Original strand, 29572148 - 29572206
Alignment:
Q  294 tgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctct 352  Q
    |||||||  ||||||||||||| ||||||||||||||||||| |||| |||||||||||    
T  29572148 tgacctctctgcctgtctatgcactttccttcttcaaagctctgtcaagtataatctct 29572206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 294 - 352
Target Start/End: Original strand, 29573525 - 29573583
Alignment:
Q  294 tgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctct 352  Q
    |||||||  ||||||||||||| ||||||||||||||||||| |||| |||||||||||    
T  29573525 tgacctctctgcctgtctatgcactttccttcttcaaagctctgtcaagtataatctct 29573583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 294 - 352
Target Start/End: Original strand, 29574902 - 29574960
Alignment:
Q  294 tgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctct 352  Q
    |||||||  ||||||||||||| ||||||||||||||||||| |||| |||||||||||    
T  29574902 tgacctctctgcctgtctatgcactttccttcttcaaagctctgtcaagtataatctct 29574960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 294 - 352
Target Start/End: Original strand, 29576279 - 29576337
Alignment:
Q  294 tgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctct 352  Q
    |||||||  ||||||||||||| ||||||||||||||||||| |||| |||||||||||    
T  29576279 tgacctctctgcctgtctatgcactttccttcttcaaagctctgtcaagtataatctct 29576337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 294 - 352
Target Start/End: Original strand, 29577656 - 29577714
Alignment:
Q  294 tgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctct 352  Q
    |||||||  ||||||||||||| ||||||||||||||||||| |||| |||||||||||    
T  29577656 tgacctctctgcctgtctatgcactttccttcttcaaagctctgtcaagtataatctct 29577714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 294 - 352
Target Start/End: Original strand, 29579033 - 29579091
Alignment:
Q  294 tgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctct 352  Q
    |||||||  ||||||||||||| ||||||||||||||||||| |||| |||||||||||    
T  29579033 tgacctctctgcctgtctatgcactttccttcttcaaagctctgtcaagtataatctct 29579091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 257 - 439
Target Start/End: Original strand, 3580834 - 3581016
Alignment:
Q  257 tcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtca 356  Q
    |||| |||||| || ||| |||| ||||| || || ||| | ||| ||| |||||||||||| ||||| |||| ||||||   |||||||||||||  ||    
T  3580834 tcttatgggggccgtttgattctcctcaaatccgttttgtcttcaatgcatgtctatgccctatcctttttcagagctcccgtaggtataatctcttcca 3580933  T
Q  357 ttgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaatttcctgggtcgcttggaactctgtttgt 439  Q
    | ||||||||| ||| ||||       |||| ||| |||||||||| ||||||||| | ||||| |  |||||||||||||||    
T  3580934 tcgaatctattcttattaaaaaaatttggggtgggggtgaggataataggaaaattgcttgggttgactggaactctgtttgt 3581016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 307 - 376
Target Start/End: Complemental strand, 22438067 - 22437998
Alignment:
Q  307 tgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaa 376  Q
    |||||||||  |||||||||||| |||||| |||||||||||||||   ||||||||||| |||||||||    
T  22438067 tgtctatgctttttccttcttcatagctccctcaggtataatctcttatattgaatctatgtttaataaa 22437998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 303 - 364
Target Start/End: Complemental strand, 38358320 - 38358259
Alignment:
Q  303 tgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatct 364  Q
    ||||||||||||| ||||| ||||||||||||||  ||||||||||||||  ||||||||||    
T  38358320 tgcctgtctatgctctttctttcttcaaagctccaacaggtataatctcttccattgaatct 38358259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 445 - 501
Target Start/End: Original strand, 10486348 - 10486404
Alignment:
Q  445 aaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgtt 501  Q
    ||||||||||||||| ||||| |||||| || ||| |||||||||||||||||||||    
T  10486348 aaaggagtatggaggtttgggggtgagaaagttgaaggagtttaatagtgctttgtt 10486404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 219 - 342
Target Start/End: Original strand, 33385176 - 33385299
Alignment:
Q  219 taaagtctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccct 318  Q
    ||||||||||||| || || ||||| ||| | |  || || ||||| ||||| ||| | |||||||| |||||||||||  |  | ||||||||||| ||    
T  33385176 taaagtctagattgtctggttggcatagtaggtacctttcctttggtggtcgcttgatacttctcaaatctgtcttgactgcgcttcctgtctatgcact 33385275  T
Q  319 ttccttcttcaaagctccgtcagg 342  Q
    |||||| |||||||||||||||||    
T  33385276 ttcctttttcaaagctccgtcagg 33385299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 352
Target Start/End: Complemental strand, 6885759 - 6885717
Alignment:
Q  310 ctatgccctttccttcttcaaagctccgtcaggtataatctct 352  Q
    |||||| |||||||||||||||||||| |||||||||||||||    
T  6885759 ctatgctctttccttcttcaaagctccatcaggtataatctct 6885717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 432 - 504
Target Start/End: Original strand, 26262292 - 26262364
Alignment:
Q  432 ctgtttgtttacgaaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgttagg 504  Q
    ||||||||||| ||||||| |||| ||||||| |  | ||| || ||||||||||||||| ||||||||||||    
T  26262292 ctgtttgtttaagaaaggaatatgaagggttgaggttaagagagatgagggagtttaatactgctttgttagg 26262364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 224 - 364
Target Start/End: Complemental strand, 31865229 - 31865089
Alignment:
Q  224 tctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttcct 323  Q
    ||||| || ||||| ||| |||| || |||||||||||||| || || |||||||| || || ||| |  ||||||| ||| ||||||||||  ||||||    
T  31865229 tctaggttgtcgggttggaaaagccgatttctctcttttggaggccgcttggttctacttaaatctattctgacctctttgtctgtctatgctttttcct 31865130  T
Q  324 tcttcaaagctccgtcaggtataatctctgtcattgaatct 364  Q
    |||||| | |||| | || || |||||||  ||||||||||    
T  31865129 tcttcagaactccataagttaaaatctcttccattgaatct 31865089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 477 - 508
Target Start/End: Complemental strand, 476892 - 476861
Alignment:
Q  477 tgagggagtttaatagtgctttgttaggtaaa 508  Q
    ||||||||||||||||||||||||||||||||    
T  476892 tgagggagtttaatagtgctttgttaggtaaa 476861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 504
Target Start/End: Complemental strand, 34481715 - 34481600
Alignment:
Q  389 gggagtgaggataacaggaaaatttcctgggtcgcttggaactctgtttgtttacgaaaggagtatggagggttgggagtgagacagctgagggagttta 488  Q
    |||||||||||||||||||||||||| ||| |   |||| |  |||||||||||  |||||||||||| || ||||| |||||  |  ||| ||||||||    
T  34481715 gggagtgaggataacaggaaaatttcttggttaagttggcaaactgtttgtttaaaaaaggagtatggtggtttgggggtgaggaaagtgaaggagttta 34481616  T
Q  489 atagtgctttgttagg 504  Q
    | |  |||||||||||    
T  34481615 acatagctttgttagg 34481600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 143; Significance: 7e-75; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 337 - 508
Target Start/End: Original strand, 33930 - 34101
Alignment:
Q  337 gtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaatttcctgggtcgcttggaactctgtt 436  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  33930 gtcaggtataatctctgtcattgaatctatttttaataaatttttttggggagggagtgaggataacaggaaaatttcctaggtcgcttggaactctgtt 34029  T
Q  437 tgtttacgaaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgttaggtaaa 508  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34030 tgtttacaaaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgttaggtaaa 34101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 142; Significance: 3e-74; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 50 - 504
Target Start/End: Complemental strand, 25194194 - 25193740
Alignment:
Q  50 aattttcataagagtatgttggttggaattaatattcagaattcatggttgaatgaagcagcctctattttaaattgcaaagttggtaaagttccgtttc 149  Q
    |||||| |||| || ||||||||||| || ||||||  | | |||||||||||||| || ||||| |||||||| |  || || || ||  |||  |||     
T  25194194 aattttaataaaagcatgttggttggtataaatattgcggagtcatggttgaatgaggcggcctcaattttaaactctaaggtgggcaagattcattttt 25194095  T
Q  150 tgtatctgggtctttctattggtggtgatccgaagaggttagccttttgggaacctgtgttgaagactgtaaagtctagattatcggggtggcaaagtcg 249  Q
    |||||||| ||||||||||||||||| |||||||  ||||||| || ||||| ||||||||| | ||  | ||||| ||||| ||||||||||| |||||    
T  25194094 tgtatctgtgtctttctattggtggtaatccgaatcggttagcattctgggatcctgtgttgcatacaattaagtccagattgtcggggtggcagagtcg 25193995  T
Q  250 ctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatc 349  Q
    |||||| ||||  || ||||||||| | ||| | |||| ||||||||||||  |  |||||||||| ||||||||||||||||||| |||||||||||||    
T  25193994 ctttctatcttacggtggtcggttgatccttttaaagtttgtcttgacctcgcttactgtctatgctctttccttcttcaaagctctgtcaggtataatc 25193895  T
Q  350 tctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaatttcctgggtcgcttggaactctgtttgtttacgaaagg 449  Q
    ||| ||||||||||||||||| ||||        ||||||||| ||||||||||||||||||||||||| |  ||||||  || |||||||||| |||||    
T  25193894 tctatcattgaatctattttttataacaaaatttggggagggaatgaggataacaggaaaatttcctggatttcttggagatcagtttgtttacaaaagg 25193795  T
Q  450 agtatggagggttgggagtgagacagctgagggagtttaatagtgctttgttagg 504  Q
    ||| |||||| ||||| ||||| ||| | ||||| |||||| ||||||| |||||    
T  25193794 agtttggaggattgggtgtgaggcagttaagggaatttaattgtgctttattagg 25193740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 31 - 508
Target Start/End: Complemental strand, 6246208 - 6245730
Alignment:
Q  31 gatgtctggtttgcgagtgaattttcataagagtatgttggttggaattaatattcagaattcatggttgaatgaagcagcctctattttaaattgcaaa 130  Q
    |||||||||||||  ||| |||||  |||| || ||||||||||| || ||||||  ||||||||||||| |||| |  || || |||| |||||| ||     
T  6246208 gatgtctggtttgaaagtaaatttcaataaaagcatgttggttggtataaatattgcgaattcatggttgtatgaggtggcatccattt-aaattgtaag 6246110  T
Q  131 gttggtaaagttccgtttctgtatctgggtctttctattggtggtgatccgaagaggttagccttttgggaacctgtgttgaagactgtaaagtctagat 230  Q
    |  ||||| ||| ||||| |||||| |||  | || ||||| ||||| ||  |||||||||| || |||||||||||| | ||| |  | ||  |||||     
T  6246109 gcgggtaaggtttcgtttgtgtatccgggcttatcgattggcggtgacccacagaggttagcattctgggaacctgtgctaaaggccattaaaactagac 6246010  T
Q  231 tatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaa 330  Q
    | | |||||||| |||||| || ||||||| ||| |||| | ||||  |||| ||||||||| ||||| | || | ||||||||| ||||||||||||||    
T  6246009 tgttggggtggcgaagtcgtttgctctcttatggtggtctggtggtcattcttaagtctgtcctgaccgcgttacttgtctatgctctttccttcttcaa 6245910  T
Q  331 agctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaatttcctgggtcgcttggaac 430  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||||       ||||||||||||| ||||| ||||||||||||||| |  |||||| |    
T  6245909 agctccgtcaggtataatccctgtcattgaatttatatttaataaaaaaatttggggagggagtgatgataataggaaaatttcctggatttcttggagc 6245810  T
Q  431 tctgtttgtttacgaaagga--gtatggagggttgggagtgagacagctgagggagtttaatagtgctttgttaggtaaa 508  Q
    | |||||||||| | |||||  ||||||||||||||| |||||  || ||  |||||||||||| |||||||||||||||    
T  6245809 tttgtttgtttatgtaaggagcgtatggagggttgggggtgaggaagttgcaggagtttaatagcgctttgttaggtaaa 6245730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 275 - 458
Target Start/End: Complemental strand, 15539938 - 15539755
Alignment:
Q  275 gttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaata 374  Q
    |||||||| |||||||||||||||||  ||||||| ||||| ||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||    
T  15539938 gttcttctaaagtctgtcttgacctctctgcctgtttatgctctttccttcttcaaagctccgtcaggtatcatttctatcattgaatctatttttaata 15539839  T
Q  375 aannnnnnnggggagggagtgaggataacaggaaaatttcctgggtcgcttggaactctgtttgtttacgaaaggagtatggag 458  Q
    ||       |||||||||||||||| |||| ||||||||||||||| ||||||| |||| | |||||| | |||||||||||||    
T  15539838 aaaaattttggggagggagtgaggagaacatgaaaatttcctgggttgcttggagctctatctgtttatgtaaggagtatggag 15539755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 113 - 504
Target Start/End: Original strand, 29721008 - 29721398
Alignment:
Q  113 tctattttaaattgcaaagttggtaaagttccgtttctgtatctgggtctttctattggtggtgatccgaagaggttagccttttgggaacctgtgttga 212  Q
    ||||||||  |||| || |||||||| ||||| ||| ||||||| || || || ||||||||||||||   ||   |||| |||||||| ||||| |||     
T  29721008 tctattttgcattgtaaggttggtaaggttccttttttgtatcttggcctatcgattggtggtgatcctcggaaactagcattttgggaccctgttttgc 29721107  T
Q  213 agactgtaaagtctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtcta 312  Q
    | ||  | || |||||||| |  |||||||| ||||| || ||||| || ||||| || ||| || | |||||||||||| || |||| |||||||||||    
T  29721108 ataccattaaatctagattgttagggtggcagagtcgtttcctctcattcgggggccgattgattttgctcaagtctgtcctgtcctctttgcctgtcta 29721207  T
Q  313 tgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaatt 412  Q
    ||| |||||||| |||||||||||||||||||||||||||  |||||||||||| |||||           |||||||||||||||||||||||||||||    
T  29721208 tgctctttcctttttcaaagctccgtcaggtataatctcttccattgaatctatgtttaaattgtttttttggggagggagtgaggataacaggaaaatt 29721307  T
Q  413 tcctgggtcgcttggaactctgtttgtttacgaaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgttagg 504  Q
    |||||| |||||||||| | | ||||||  || ||||||||||| |||||||| |||||  |  ||| ||||||||||  ||| ||||||||    
T  29721308 tcctggatcgcttggaattatatttgttctcgtaaggagtatgg-gggttgggtgtgaggaaattgaaggagtttaatcttgcgttgttagg 29721398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 272 - 504
Target Start/End: Complemental strand, 12341451 - 12341219
Alignment:
Q  272 ttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctattttta 371  Q
    ||||||||||||||||| ||| || ||||  |||||||||| || |||||||| |||||||||| ||| ||||||||||||  |||||||| |||||||     
T  12341451 ttggttcttctcaagtccgtcatgtcctctctgcctgtctacgctctttcctttttcaaagctctgtcgggtataatctcttccattgaatttatttttt 12341352  T
Q  372 ataaannnnnnnggggagggagtgaggataacaggaaaatttcctgggtcgcttggaactctgtttgtttacgaaaggagtatggagggttgggagtgag 471  Q
      ||        ||||||||||||||||||||||||||||||||||| | |||||||  || || ||||||||||||||| |||| || ||||| |||||    
T  12341351 taaatatattttggggagggagtgaggataacaggaaaatttcctggattgcttggagttcggtatgtttacgaaaggagaatgggggtttgggggtgag 12341252  T
Q  472 acagctgagggagtttaatagtgctttgttagg 504  Q
    |||| ||| ||| |||||||  |||||||||||    
T  12341251 acagttgaaggaatttaatatggctttgttagg 12341219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 317 - 504
Target Start/End: Complemental strand, 36025360 - 36025173
Alignment:
Q  317 ctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaatttcct 416  Q
    ||||||||||||||||||||||||||||||||||||  |||| | |||||||||||||||       |||||||||||||||||||||||||||||||||    
T  36025360 ctttccttcttcaaagctccgtcaggtataatctcttccattaactctatttttaataaaaaaatttggggagggagtgaggataacaggaaaatttcct 36025261  T
Q  417 gggtcgcttggaactctgtttgtttacgaaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgttagg 504  Q
    || ||||||||| | ||||||||||||| || ||  | || || ||||| ||||| ||| |||| || ||||||| |||||| |||||    
T  36025260 ggatcgcttggagcactgtttgtttacgtaaagaagaggggggattgggggtgaggcagttgagtgaatttaatattgctttattagg 36025173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 273 - 507
Target Start/End: Complemental strand, 7453235 - 7453001
Alignment:
Q  273 tggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaa 372  Q
    |||||||| | || ||||||||||| ||  | ||||||||||| ||||| |||||||||||||| |||||||||||||||  | |||||||| | |||||    
T  7453235 tggttcttttaaaatctgtcttgacttctctacctgtctatgcactttctttcttcaaagctccatcaggtataatctcttcccttgaatctttatttaa 7453136  T
Q  373 taaannnnnnnggggagggagtgaggataacaggaaaatttcctgggtcgcttggaactctgtttgtttacgaaaggagtatggagggttgggagtgaga 472  Q
    |||        |||| || ||||||||| | || |||||||||||| | | ||||||  ||||||||| |  ||||||||||||||| ||||| ||||||    
T  7453135 taattttttttgggggggcagtgaggatcatagaaaaatttcctggataggttggaaaactgtttgttcaaaaaaggagtatggaggtttgggggtgaga 7453036  T
Q  473 cagctgagggagtttaatagtgctttgttaggtaa 507  Q
    ||| |||  || |||||||||||||||||||||||    
T  7453035 cagttgaatgaatttaatagtgctttgttaggtaa 7453001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 257 - 490
Target Start/End: Original strand, 4987306 - 4987539
Alignment:
Q  257 tcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtca 356  Q
    |||||||| || || |||||||||||||| ||||| ||||||||  | ||||||||||| ||||| |||||||||||||||||||||||||| |||  |     
T  4987306 tcttttggtggccgtttggttcttctcaaatctgtgttgacctctctacctgtctatgctctttctttcttcaaagctccgtcaggtataatttctaccc 4987405  T
Q  357 ttgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaatttcctgggtcgcttggaactctgtttgtttacgaaaggagtatgg 456  Q
    |||||||| | ||||||||        |||| || ||||||||| | |||||||| || ||| | | |||||||||||||||| | |  ||||||| |||    
T  4987406 ttgaatctttatttaataattttttttggggtggtagtgaggatcataggaaaatgtcttggataggttggaactctgtttgtctccagaaggagtttgg 4987505  T
Q  457 agggttgggagtgagacagctgagggagtttaat 490  Q
    |||||| || || |||||| ||| ||||||||||    
T  4987506 agggttaggggttagacagttgaaggagtttaat 4987539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 326 - 496
Target Start/End: Original strand, 37165431 - 37165601
Alignment:
Q  326 ttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaatttcctgggtcgctt 425  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||| |         ||||||||||||||||||||||||||| |||||| | ||||    
T  37165431 ttcaaagctccgtcaggtataatctcttccattgaatctatttttaattatttttttttgggagggagtgaggataacaggaaaatctcctggatagctt 37165530  T
Q  426 ggaactctgtttgtttacgaaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgct 496  Q
    ||| ||| ||||| |||||||||||| |||| || ||||| ||||| | | ||| ||| ||||||| ||||    
T  37165531 ggagctcggtttgcttacgaaaggagaatgggggtttgggggtgaggcggttgaaggaatttaatattgct 37165601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 226 - 414
Target Start/End: Complemental strand, 9923531 - 9923343
Alignment:
Q  226 tagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttc 325  Q
    |||||| || || ||||||||||| || || |||||||| ||||| ||||||||||| ||||| ||||||||  |  | ||||||||| | ||||||||     
T  9923531 tagattgtctggttggcaaagtcgattcctttcttttggtggtcgtttggttcttcttaagtccgtcttgactgctctacctgtctatacactttccttt 9923432  T
Q  326 ttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaatttc 414  Q
    |||||||||||||||||||||||||||  |||||||||| | |||||||||        ||||||| |||||||||| || ||||||||    
T  9923431 ttcaaagctccgtcaggtataatctcttccattgaatctttgtttaataaatttttttcgggagggggtgaggataaaagaaaaatttc 9923343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 245 - 351
Target Start/End: Original strand, 16375332 - 16375438
Alignment:
Q  245 agtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggta 344  Q
    ||||| |||||||||||||| ||||| |||||||| ||||| ||||||||||||||  ||||||||||| | ||||||||||||||| ||||  ||||||    
T  16375332 agtcggtttctctcttttggtggtcgcttggttctactcaaatctgtcttgacctctctgcctgtctatacactttccttcttcaaacctccaacaggta 16375431  T
Q  345 taatctc 351  Q
    |||||||    
T  16375432 taatctc 16375438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 289 - 375
Target Start/End: Complemental strand, 36158021 - 36157935
Alignment:
Q  289 tgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataa 375  Q
    ||||||||||||  ||||||||||||| |||||||||||||||||||| |||||||||||||||  |||||||||| | ||||||||    
T  36158021 tgtcttgacctctctgcctgtctatgcgctttccttcttcaaagctccatcaggtataatctcttccattgaatctttgtttaataa 36157935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 224 - 376
Target Start/End: Complemental strand, 7925318 - 7925166
Alignment:
Q  224 tctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttcct 323  Q
    |||||||| || || |||  |||||| || || ||||| || ||||| ||| ||||||| ||||||||| ||||  |  | ||||||||||| |||||||    
T  7925318 tctagattgtctggttggncaagtcggttcctatctttcggtggtcgtttgattcttctaaagtctgtcctgactgctctacctgtctatgcactttcct 7925219  T
Q  324 tcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaa 376  Q
    |||||||||||||| ||||||||||||||  |||||||||| | |||||||||    
T  7925218 tcttcaaagctccgacaggtataatctcttccattgaatctttgtttaataaa 7925166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 260 - 370
Target Start/End: Complemental strand, 36493277 - 36493167
Alignment:
Q  260 tttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattg 359  Q
    ||||| || ||||| ||||| || |||||||||||||||||  | ||||||||||| |||||||||||||| ||||||||||||||||| |||  | |||    
T  36493277 tttggtggccggttagttctcctaaagtctgtcttgacctctctacctgtctatgctctttccttcttcaaggctccgtcaggtataatttcttcccttg 36493178  T
Q  360 aatctattttt 370  Q
    | |||||||||    
T  36493177 attctattttt 36493167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 279 - 376
Target Start/End: Original strand, 4991959 - 4992056
Alignment:
Q  279 ttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaa 376  Q
    ||||||||| |||||| || || |||| ||||||||  ||||||||||||||||||| ||||| ||||||||||  || |||||||||||||||||||    
T  4991959 ttctcaagtatgtctttacttctttgcatgtctatgatctttccttcttcaaagctctgtcagatataatctcttccactgaatctatttttaataaa 4992056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 272 - 376
Target Start/End: Complemental strand, 12332732 - 12332628
Alignment:
Q  272 ttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctattttta 371  Q
    ||||||||||| |||||||||||||||||  | ||||||||||| || ||||||||||| ||||| ||||||||||| |||  | |||| ||||||||||    
T  12332732 ttggttcttctaaagtctgtcttgacctctctacctgtctatgctctctccttcttcaaggctccatcaggtataatttcttcccttgactctattttta 12332633  T
Q  372 ataaa 376  Q
     ||||    
T  12332632 ctaaa 12332628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 239 - 376
Target Start/End: Complemental strand, 8300720 - 8300583
Alignment:
Q  239 tggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgt 338  Q
    ||||||||||| ||||| || || || || || ||| ||||||| ||||| ||| ||||  |  | ||||||||||| |||||||| ||||||||||||     
T  8300720 tggcaaagtcggtttctttccttcggtggccgtttgattcttctaaagtccgtcctgactgctctacctgtctatgcactttcctttttcaaagctccgg 8300621  T
Q  339 caggtataatctctgtcattgaatctatttttaataaa 376  Q
    ||||||||||||||  |||||||||| | |||||||||    
T  8300620 caggtataatctcttccattgaatctttgtttaataaa 8300583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 306 - 508
Target Start/End: Complemental strand, 18187995 - 18187794
Alignment:
Q  306 ctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacag 405  Q
    |||||||||| |||||| ||||||||||||||||||||| |||||||   ||| ||| | | || ||||||       |||||||| ||||||| || ||    
T  18187995 ctgtctatgctctttccatcttcaaagctccgtcaggtacaatctcttctattaaatttttattgaataaatttttttggggagggtgtgaggacaatag 18187896  T
Q  406 gaaaatttcctgggtcgcttggaactctgtttgtttacgaaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgttaggt 505  Q
    ||||||||| ||| |   ||||||   |||||||||| |||| |||| |||||||||||| || || ||   |||||||||||| | |||||||||||||    
T  18187895 gaaaatttcttggattagttggaa-aatgtttgtttaggaaaagagtctggagggttgggggttaggcatacgagggagtttaacactgctttgttaggt 18187797  T
Q  506 aaa 508  Q
    |||    
T  18187796 aaa 18187794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 251 - 364
Target Start/End: Complemental strand, 23942992 - 23942879
Alignment:
Q  251 tttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatct 350  Q
    ||||||||||| || || || ||| | |||||||| || ||  |||| || |||||||||||||| |||||||||||||||||||| ||| |||||||||    
T  23942992 tttctctctttcggtggccgcttgatccttctcaaatcagttctgacttctttgcctgtctatgctctttccttcttcaaagctccatcatgtataatct 23942893  T
Q  351 ctgtcattgaatct 364  Q
    ||  ||||||||||    
T  23942892 cttccattgaatct 23942879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 224 - 414
Target Start/End: Original strand, 26774455 - 26774645
Alignment:
Q  224 tctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttcct 323  Q
    ||||||||||| || ||| | ||||| ||||| |||||||  ||||| ||| ||||  | ||||||||| |||| || || ||| ||||||| || ||||    
T  26774455 tctagattatctggttggaagagtcgttttctgtcttttgttggtcgtttgattctcattaagtctgtcctgacttcgttacctatctatgctctctcct 26774554  T
Q  324 tcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaatttc 414  Q
    ||||||||||||||||| |||||||||||   ||||||| | |||| ||||||       ||||||| ||||||||  | |||||||||||    
T  26774555 tcttcaaagctccgtcatgtataatctcttctattgaatatcttttaaataaatttttttggggaggaagtgaggaacataggaaaatttc 26774645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 352
Target Start/End: Complemental strand, 17659713 - 17659645
Alignment:
Q  284 aagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctct 352  Q
    ||||||||| ||||||| |||||||||||||| ||||||||||| |||||||| ||| |||||||||||    
T  17659713 aagtctgtcctgacctctttgcctgtctatgcgctttccttcttaaaagctccatcaagtataatctct 17659645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 305 - 364
Target Start/End: Original strand, 13878776 - 13878835
Alignment:
Q  305 cctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatct 364  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||  ||||||||||    
T  13878776 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctcttccattgaatct 13878835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 224 - 375
Target Start/End: Complemental strand, 32267486 - 32267335
Alignment:
Q  224 tctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttcct 323  Q
    |||||||| || || ||||||||||| || || ||||| || ||||| ||| ||||||  ||||| ||| ||||  |  | ||||||||||| |||||||    
T  32267486 tctagattgtctggttggcaaagtcggttcctttctttcggtggtcgtttgattcttcaaaagtccgtcatgactgctctacctgtctatgcactttcct 32267387  T
Q  324 tcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataa 375  Q
    | |||||||||  ||||||||||||||||  |||||||||| | ||||||||    
T  32267386 ttttcaaagctttgtcaggtataatctcttccattgaatctttgtttaataa 32267335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 302 - 364
Target Start/End: Complemental strand, 24794574 - 24794512
Alignment:
Q  302 ttgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatct 364  Q
    |||||||||||||| ||||||||||| |||||||| |||||||||||||||  ||||||||||    
T  24794574 ttgcctgtctatgctctttccttctttaaagctccatcaggtataatctcttccattgaatct 24794512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 307 - 364
Target Start/End: Complemental strand, 6901786 - 6901729
Alignment:
Q  307 tgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatct 364  Q
    |||||||||||||||||||||||||||||| | |||||||||||||  ||||||||||    
T  6901786 tgtctatgccctttccttcttcaaagctccattaggtataatctcttccattgaatct 6901729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 257 - 439
Target Start/End: Original strand, 41691001 - 41691183
Alignment:
Q  257 tcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtca 356  Q
    |||| ||| ||||| ||| |||| || ||||||||| || | ||| ||||||||||  ||||||| || |||| ||||||  ||||||||||||||  ||    
T  41691001 tcttatggtggtcgattgattctccttaagtctgtcctgtcttcactgcctgtctacaccctttcttttttcagagctcccgcaggtataatctcttcca 41691100  T
Q  357 ttgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaatttcctgggtcgcttggaactctgtttgt 439  Q
    ||||||||||||| | ||||       |||| ||| |||||||| | || |||||| | ||||| | ||||||||||||||||    
T  41691101 ttgaatctattttaattaaaatattttggggtgggggtgaggatcatagaaaaattgcttgggtagattggaactctgtttgt 41691183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 260 - 352
Target Start/End: Complemental strand, 17700376 - 17700284
Alignment:
Q  260 tttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctct 352  Q
    ||||| ||||| ||| | |||||||| |||||||||||  |  | ||||||||||| |||||||| |||||||||||||||| ||||||||||    
T  17700376 tttggtggtcgattgatacttctcaaatctgtcttgactgcgcttcctgtctatgcactttcctttttcaaagctccgtcagatataatctct 17700284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 224 - 376
Target Start/End: Original strand, 41664576 - 41664728
Alignment:
Q  224 tctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttcct 323  Q
    |||||||| || || ||||||||||| || || ||||| || ||||| ||| |||| || ||||| ||| ||||  |    |||||||| || |||||||    
T  41664576 tctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctccacctgtctacgcactttcct 41664675  T
Q  324 tcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaa 376  Q
    | ||||||||||||||||||||||||| |  |||||||||| | |||||||||    
T  41664676 ttttcaaagctccgtcaggtataatctattccattgaatctttgtttaataaa 41664728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 273 - 352
Target Start/End: Original strand, 45255097 - 45255176
Alignment:
Q  273 tggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctct 352  Q
    |||||||| | ||||||||  |||||||  || |||||||||| ||||| |||||||||||||| |||||||||||||||    
T  45255097 tggttcttttaaagtctgttctgacctcgctgtctgtctatgcgctttcattcttcaaagctccatcaggtataatctct 45255176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 302 - 364
Target Start/End: Original strand, 11393617 - 11393679
Alignment:
Q  302 ttgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatct 364  Q
    |||||||||||||| ||||| ||||| |||||||| |||||||||||||||  ||||||||||    
T  11393617 ttgcctgtctatgctctttcattctttaaagctccatcaggtataatctcttccattgaatct 11393679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 219 - 376
Target Start/End: Complemental strand, 20825237 - 20825079
Alignment:
Q  219 taaagtctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccct 318  Q
    ||||||||||||| || || ||||| ||| | |  || || ||||| ||||| ||| |||| ||||| | |||||||||  |  | ||||||||||| ||    
T  20825237 taaagtctagattgtctggttggcatagtaggtacctttcctttggtggtcgcttgattctgctcaaatatgtcttgactgcgcttcctgtctatgcact 20825138  T
Q  319 ttccttctt-caaagctccgtcaggtataatctctgtcattgaatctatttttaataaa 376  Q
    |||||| || |||||||||||||||||||||||||   ||||||||| | |||||||||    
T  20825137 ttccttttttcaaagctccgtcaggtataatctcttctattgaatctttgtttaataaa 20825079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 307 - 364
Target Start/End: Original strand, 43612476 - 43612533
Alignment:
Q  307 tgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatct 364  Q
    ||||||||||||||| ||||| |||||||| |||||||||||||||  ||||||||||    
T  43612476 tgtctatgccctttcattcttgaaagctccatcaggtataatctcttccattgaatct 43612533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 302 - 376
Target Start/End: Original strand, 43775057 - 43775131
Alignment:
Q  302 ttgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaa 376  Q
    |||| ||| |||||||||||||||||||| ||||||||||||||  | ||  | || ||||||||||||||||||    
T  43775057 ttgcatgtttatgccctttccttcttcaaggctccgtcaggtatcgtttcctttatcgaatctatttttaataaa 43775131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 307 - 352
Target Start/End: Original strand, 28992510 - 28992555
Alignment:
Q  307 tgtctatgccctttccttcttcaaagctccgtcaggtataatctct 352  Q
    ||||||||| ||||||||||||||||  ||||||||||||||||||    
T  28992510 tgtctatgctctttccttcttcaaagtcccgtcaggtataatctct 28992555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 307 - 508
Target Start/End: Complemental strand, 5585538 - 5585337
Alignment:
Q  307 tgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacagg 406  Q
    ||||||||| || | ||||||||| ||||| ||| |||||||||||  |||||||||||| || |||||         ||| |||||||||||| | |||    
T  5585538 tgtctatgctctgttcttcttcaaggctccatcatgtataatctcttccattgaatctatattgaataatttttttttgggggggagtgaggatcatagg 5585439  T
Q  407 aaaatttcctgggtcgcttggaactctgtttgtttacgaaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgttaggta 506  Q
    ||||| || ||| |   ||||||   ||||||||| || |||||||||||||| ||||  |||||  || | ||||| ||||||| ||||||  ||||||    
T  5585438 aaaatatcttggttacgttggaatattgtttgtttgcgtaaggagtatggaggattggaggtgaggaagttaagggaatttaatattgctttactaggta 5585339  T
Q  507 aa 508  Q
    ||    
T  5585338 aa 5585337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 317 - 373
Target Start/End: Complemental strand, 8445652 - 8445596
Alignment:
Q  317 ctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaat 373  Q
    |||||||||||||||||||| |||||||| || |||  |||||||||||| ||||||    
T  8445652 ctttccttcttcaaagctccttcaggtatcatttcttccattgaatctatatttaat 8445596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Original strand, 16048333 - 16048365
Alignment:
Q  433 tgtttgtttacgaaaggagtatggagggttggg 465  Q
    |||||||||||||||||||||||||||||||||    
T  16048333 tgtttgtttacgaaaggagtatggagggttggg 16048365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 351
Target Start/End: Original strand, 28453757 - 28453805
Alignment:
Q  303 tgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctc 351  Q
    |||||||||| |||||||| || ||||||||||| ||||||||||||||    
T  28453757 tgcctgtctacgccctttcttttttcaaagctccctcaggtataatctc 28453805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 306 - 352
Target Start/End: Complemental strand, 10530510 - 10530464
Alignment:
Q  306 ctgtctatgccctttccttcttcaaagctccgtcaggtataatctct 352  Q
    |||| ||||| |||||||| ||||||||||| |||||||||||||||    
T  10530510 ctgtttatgcactttcctttttcaaagctccttcaggtataatctct 10530464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 302 - 364
Target Start/End: Original strand, 43249090 - 43249152
Alignment:
Q  302 ttgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatct 364  Q
    |||||| || |||| |||| |||||| |||| ||| ||||||||||||||| |||||||||||    
T  43249090 ttgcctatccatgctcttttcttctttaaagttccatcaggtataatctctttcattgaatct 43249152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 364
Target Start/End: Complemental strand, 12135072 - 12135015
Alignment:
Q  307 tgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatct 364  Q
    ||||||||| ||||||||||| |||||| | || ||||||||||||  ||||||||||    
T  12135072 tgtctatgcactttccttctttaaagcttcatcgggtataatctcttccattgaatct 12135015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 125; Significance: 4e-64; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 268 - 508
Target Start/End: Original strand, 43516000 - 43516240
Alignment:
Q  268 tcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatt 367  Q
    ||||||||| ||||| ||||||||| ||||  |||| ||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  43516000 tcggttggtccttctaaagtctgtcctgactgcattacctgtctatgctctttccttcttcaaggctccatcaggtataatctctgtcattgaatctatt 43516099  T
Q  368 tttaata-aannnnnnnggggagggagtgaggataacaggaaaatttcctgggtcgcttggaactctgtttgtttacgaaaggagtatggagggttggga 466  Q
    ||||||| ||       |||||||||||| |||||||||||||||||||||||| ||||||| ||||||||| ||||| ||||||||||||||||||||     
T  43516100 tttaatataaaaaaattggggagggagtg-ggataacaggaaaatttcctgggttgcttggagctctgtttgcttacgtaaggagtatggagggttgggg 43516198  T
Q  467 gtgagacagctgagggagtttaatagtgctttgttaggtaaa 508  Q
    |||||  || ||  ||| ||||||||||||||||||||||||    
T  43516199 gtgaggaagttgcaggaatttaatagtgctttgttaggtaaa 43516240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 110 - 508
Target Start/End: Complemental strand, 2072586 - 2072188
Alignment:
Q  110 gcctctattttaaattgcaaagttggtaaagttccgtttctgtatctgggtctttctattggtggtgatccgaagaggttagccttttgggaacctgtgt 209  Q
    ||||||||||||||||| || || |||||  ||| |||| ||||| ||||||| || ||||   ||||||| |  |||||||| ||||||||||| ||      
T  2072586 gcctctattttaaattgtaaggtgggtaagattctgtttttgtatttgggtctctcgattgaaagtgatcctagaaggttagctttttgggaacccgttg 2072487  T
Q  210 tgaagactgtaaagtctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgt 309  Q
    |||| ||  | ||||||||| ||||||||||||||||||| |||||||| || || || ||||||||||||||||| | |||| |||||||  ||| |||    
T  2072486 tgaataccattaagtctagactatcggggtggcaaagtcgttttctctccttcggaggccggttggttcttctcaaatttgtcatgacctctctgcatgt 2072387  T
Q  310 ctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaa 409  Q
    |||||| ||||| ||||||||||||||||||| |||||||||| ||||||| |||||||||   |||       |||||||||| ||||| |||| ||||    
T  2072386 ctatgctctttctttcttcaaagctccgtcagatataatctctttcattgactctatttttttcaaaaaaaattggggagggagcgaggacaacatgaaa 2072287  T
Q  410 atttcctgggtcgcttggaactctgtttgtttacgaaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgttaggtaaa 508  Q
    |||| |||| ||||||||| |||| ||  ||||||  | ||||||||||  |||||  |||||||| ||||||  ||||||| |||||| |||||||||    
T  2072286 atttactggatcgcttggagctctattactttacgtcaagagtatggagatttggggttgagacagttgaggggatttaatattgctttattaggtaaa 2072188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 31 - 442
Target Start/End: Complemental strand, 9691548 - 9691137
Alignment:
Q  31 gatgtctggtttgcgagtgaattttcataagagtatgttggttggaattaatattcagaattcatggttgaatgaagcagcctctattttaaattgcaaa 130  Q
    ||||||||||||   ||||||||||||||||||| || |||||||| |||| |||  | |||| ||||| ||||| ||  | ||| |||||||||| |||    
T  9691548 gatgtctggtttaaaagtgaattttcataagagtttgctggttggagttaacattggggattcttggttaaatgaggcgtcatctgttttaaattgtaaa 9691449  T
Q  131 gttggtaaagttccgtttctgtatctgggtctttctattggtggtgatccgaagaggttagccttttgggaacctgtgttgaagactgtaaagtctagat 230  Q
    || |||||| || ||||||||||||| || || || ||||| |||||||| | || ||| || |||||||| || ||| ||   ||  | || |||||||    
T  9691448 gtgggtaaaatttcgtttctgtatcttggactctcgattggaggtgatcctaggaagttggcgttttgggacccagtggtgtctaccattaaatctagat 9691349  T
Q  231 tatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaa 330  Q
    ||||||||||||||||||| ||||| || |||| ||||||||| |||||||||||||||||| | || ||  | ||||| ||||| ||||||||||||||    
T  9691348 tatcggggtggcaaagtcgttttctatcctttgagggtcggttagttcttctcaagtctgtccttacttcgcttcctgtttatgctctttccttcttcaa 9691249  T
Q  331 agctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaatttcctgggtcgcttggaac 430  Q
    || || |||||||||||||||| || |||||||||||||||  |||       |||| || |||||||||||||| |||||| ||||  | ||||||| |    
T  9691248 agttctgtcaggtataatctctatctttgaatctatttttacaaaaaaaatttggggtggtagtgaggataacagaaaaattccctgaattgcttggagc 9691149  T
Q  431 tctgtttgttta 442  Q
    ||| ||||||||    
T  9691148 tctatttgttta 9691137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 245 - 504
Target Start/End: Complemental strand, 19115347 - 19115088
Alignment:
Q  245 agtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggta 344  Q
    ||||| || ||||||||||| || || ||||||||||||||  |||||||||| ||  || |||||||||| ||||||||||||||||||||||||||||    
T  19115347 agtcgtttcctctcttttggtggccgcttggttcttctcaaagctgtcttgacttctctgtctgtctatgcactttccttcttcaaagctccgtcaggta 19115248  T
Q  345 taatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaatttcctgggtcgcttggaactctgtttgtttacg 444  Q
    ||||||||  |||||||||| | ||||||||        |||| ||| ||||||||   |||||||| || ||| | |||||||  ||||||||| | |     
T  19115247 taatctctaccattgaatctttatttaataattttttttggggtgggggtgaggattgtaggaaaatatcttggatagcttggagttctgtttgtctcca 19115148  T
Q  445 aaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgttagg 504  Q
    |||||||| ||||||||| || || |||||| ||| ||||||||||| |||||| |||||    
T  19115147 aaaggagtttggagggttaggggttagacagttgaaggagtttaatattgctttattagg 19115088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 245 - 491
Target Start/End: Complemental strand, 8935985 - 8935739
Alignment:
Q  245 agtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggta 344  Q
    ||||| || |||||||||||  | || |||||||||||||| ||||| ||||||||  || |||||||||| ||||||||||||||||||||||||||||    
T  8935985 agtcgtttcctctcttttggttgccgtttggttcttctcaaatctgtgttgacctctctgtctgtctatgctctttccttcttcaaagctccgtcaggta 8935886  T
Q  345 taatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaatttcctgggtcgcttggaactctgtttgtttacg 444  Q
    ||||||||| |||||||| | | ||||||||         |||  ||||||||||| |||||||||| || | | | | |||||  ||||||||| | |     
T  8935885 taatctctgccattgaatttttatttaataatttttttttggggtggagtgaggatcacaggaaaatgtcttagatagattggagttctgtttgtctcca 8935786  T
Q  445 aaaggagtatggagggttgggagtgagacagctgagggagtttaata 491  Q
    |||||||| ||||||||| || || |||||| ||| |||||||||||    
T  8935785 aaaggagtttggagggttaggggttagacagttgaaggagtttaata 8935739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 257 - 459
Target Start/End: Original strand, 29553042 - 29553244
Alignment:
Q  257 tcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtca 356  Q
    |||||||| ||||| ||||||||||||||  |||||||||| ||  ||||||||||||| ||||||||||||||||||||||||||||||||||||  ||    
T  29553042 tcttttggtggtcgtttggttcttctcaaagctgtcttgacttctctgcctgtctatgctctttccttcttcaaagctccgtcaggtataatctcttcca 29553141  T
Q  357 ttgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaatttcctgggtcgcttggaactctgtttgtttacgaaaggagtatgg 456  Q
    |||||||| | |||||||||       |||| ||| |||||||  |||||||||| || ||| | | |||||  | ||||||| | | ||||||||||||    
T  29553142 ttgaatctttatttaataaatttttttggggtgggggtgaggaacacaggaaaatctcttggataggttggagttatgtttgtctccaaaaggagtatgg 29553241  T
Q  457 agg 459  Q
    |||    
T  29553242 agg 29553244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 224 - 351
Target Start/End: Complemental strand, 55299553 - 55299426
Alignment:
Q  224 tctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttcct 323  Q
    |||||||| ||||| ||| | ||||| |||||||||||||| ||||| |||||||| ||||| ||||||||||||||  ||||||||||||| |||||||    
T  55299553 tctagattgtcgggttggaatagtcggtttctctcttttggtggtcgcttggttctactcaaatctgtcttgacctctctgcctgtctatgcactttcct 55299454  T
Q  324 tcttcaaagctccgtcaggtataatctc 351  Q
    |||||||||||||  |||||||||||||    
T  55299453 tcttcaaagctccaacaggtataatctc 55299426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 224 - 351
Target Start/End: Original strand, 23872685 - 23872812
Alignment:
Q  224 tctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttcct 323  Q
    |||||| | ||||| ||| | ||||| |||||||||||||| ||||| |||||||| ||||| ||||||||||||||  ||||||||||||| |||||||    
T  23872685 tctagactgtcgggttggaatagtcggtttctctcttttggtggtcgcttggttctactcaaatctgtcttgacctctctgcctgtctatgcactttcct 23872784  T
Q  324 tcttcaaagctccgtcaggtataatctc 351  Q
    |||||||||||||  |||||||||||||    
T  23872785 tcttcaaagctccagcaggtataatctc 23872812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 245 - 462
Target Start/End: Complemental strand, 19648606 - 19648389
Alignment:
Q  245 agtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggta 344  Q
    ||||| || ||||||||||  || || |||||||||||||| ||||| ||||||||  | ||||||||||| ||||| ||||||||||||||||||||||    
T  19648606 agtcgtttcctctcttttgctggccgtttggttcttctcaaatctgtgttgacctctctacctgtctatgctctttctttcttcaaagctccgtcaggta 19648507  T
Q  345 taatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaatttcctgggtcgcttggaactctgtttgtttacg 444  Q
    |||| |||  | |||||||| | ||||||||        |||| |||||||||||| | |||||||| || ||| | | |||||||||| ||||| | |     
T  19648506 taatttctacccttgaatctttatttaataattttttttggggtgggagtgaggatcataggaaaatgtcttggataggttggaactctatttgtctcca 19648407  T
Q  445 aaaggagtatggagggtt 462  Q
     ||||||| |||||||||    
T  19648406 gaaggagtttggagggtt 19648389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 224 - 376
Target Start/End: Original strand, 23641799 - 23641951
Alignment:
Q  224 tctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttcct 323  Q
    |||||||| || || ||||||||||| || || ||||| || ||||| ||| ||||||| ||||||||| ||||  |  | ||||||||||| |||||||    
T  23641799 tctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattcttctaaagtctgtcctgactgctctacctgtctatgcactttcct 23641898  T
Q  324 tcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaa 376  Q
    |||||||||||||| ||||||||||||||  |||||||||| | |||||||||    
T  23641899 tcttcaaagctccgacaggtataatctcttccattgaatctttgtttaataaa 23641951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 122 - 337
Target Start/End: Complemental strand, 15342854 - 15342639
Alignment:
Q  122 aattgcaaagttggtaaagttccgtttctgtatctgggtctttctattggtggtgatccgaagaggttagccttttgggaacctgtgttgaagactgtaa 221  Q
    |||| ||| ||||| ||||||| |||| ||||||||||| | || ||||| |||||| | | ||| || || |||||||||||||| ||||| ||  | |    
T  15342854 aattacaaggttgggaaagttctgtttatgtatctgggtttatcgattgggggtgattctaggagattggcattttgggaacctgttttgaataccatta 15342755  T
Q  222 agtctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttc 321  Q
    | ||||||||  |||| ||||| | ||| |||||||  | ||| ||||| ||||||||||| || |||||| || |  ||||||||||||||||||||||    
T  15342754 aatctagattgacgggatggcacaatcgttttctcttctatggtggtcgtttggttcttcttaaatctgtcgtgtcagcattgcctgtctatgccctttc 15342655  T
Q  322 cttcttcaaagctccg 337  Q
    ||| ||||||||||||    
T  15342654 ctttttcaaagctccg 15342639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 245 - 351
Target Start/End: Complemental strand, 20675946 - 20675840
Alignment:
Q  245 agtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggta 344  Q
    ||||| ||| |||||||||| ||||| |||||||| ||||| ||||||||||||||  ||||||||||||| ||||| ||||||||||||||  ||||||    
T  20675946 agtcggtttttctcttttggtggtcgcttggttctactcaaatctgtcttgacctctctgcctgtctatgcactttcattcttcaaagctccagcaggta 20675847  T
Q  345 taatctc 351  Q
    |||||||    
T  20675846 taatctc 20675840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 224 - 376
Target Start/End: Original strand, 1827748 - 1827900
Alignment:
Q  224 tctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttcct 323  Q
    |||||||| || || ||||||||||| || |||||||| || || || ||| ||||||| ||||| ||| ||||  |  | ||||||||||| |||||||    
T  1827748 tctagattgtctggttggcaaagtcggttcctctctttcggtggccgtttgattcttctaaagtccgtcctgactgctcttcctgtctatgcactttcct 1827847  T
Q  324 tcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaa 376  Q
    | |||||||||||||||||||||||||||  |||||||||| | |||||||||    
T  1827848 ttttcaaagctccgtcaggtataatctcttccattgaatctttgtttaataaa 1827900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 224 - 376
Target Start/End: Original strand, 23647457 - 23647609
Alignment:
Q  224 tctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttcct 323  Q
    |||||||| || || ||||||||||| || || ||||| || ||||  ||| ||||||| ||||||||| ||||  |  | ||||||||||| |||||||    
T  23647457 tctagattgtctggttggcaaagtcggttcctatctttcggtggtcatttgattcttctaaagtctgtcctgactgctctacctgtctatgcactttcct 23647556  T
Q  324 tcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaa 376  Q
    |||||||||||||| ||||||||||||||  |||||||||| | |||||||||    
T  23647557 tcttcaaagctccgacaggtataatctcttccattgaatctttgtttaataaa 23647609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 257 - 364
Target Start/End: Complemental strand, 34976840 - 34976733
Alignment:
Q  257 tcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtca 356  Q
    |||||||| || || ||||||||| | ||||||||| |||||||  ||||||| ||||| |||||||||||||||||||| |||||||||||||||  ||    
T  34976840 tcttttggcggccgtttggttcttttaaagtctgtcctgacctctctgcctgtttatgcgctttccttcttcaaagctccatcaggtataatctcttcca 34976741  T
Q  357 ttgaatct 364  Q
    ||||||||    
T  34976740 ttgaatct 34976733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 243 - 370
Target Start/End: Complemental strand, 38296618 - 38296491
Alignment:
Q  243 aaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcagg 342  Q
    ||||||| ||||| || ||||| || || || || |||||||||||||| ||||||||  | ||||||||||| |||||||||||||| |||||||||||    
T  38296618 aaagtcggtttctgtcatttggtggccgtttagtccttctcaagtctgttttgacctctctacctgtctatgctctttccttcttcaaggctccgtcagg 38296519  T
Q  343 tataatctctgtcattgaatctattttt 370  Q
    |||||| | |  ||||||||||||||||    
T  38296518 tataattttttccattgaatctattttt 38296491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 224 - 376
Target Start/End: Complemental strand, 47419736 - 47419584
Alignment:
Q  224 tctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttcct 323  Q
    |||||||| || || ||||||||||| || || ||||| || ||||| ||| |||| || ||||| ||| ||||  |  | ||||||||||| || ||||    
T  47419736 tctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtcggtcctgactgctctccctgtctatgcactctcct 47419637  T
Q  324 tcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaa 376  Q
    |||||||||||||| ||||||||||||||  |||||||||| | |||||||||    
T  47419636 tcttcaaagctccgacaggtataatctcttccattgaatctttgtttaataaa 47419584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 257 - 364
Target Start/End: Original strand, 19733229 - 19733336
Alignment:
Q  257 tcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtca 356  Q
    |||||||| ||||| ||| | |||||||| |||||| ||||  |  | ||||||||||| |||||||| |||||||||||||||||||||||||||  ||    
T  19733229 tcttttggtggtcgattgatccttctcaaatctgtcctgactgcccttcctgtctatgctctttcctttttcaaagctccgtcaggtataatctcttcca 19733328  T
Q  357 ttgaatct 364  Q
    ||||||||    
T  19733329 ttgaatct 19733336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 251 - 364
Target Start/End: Complemental strand, 26694833 - 26694720
Alignment:
Q  251 tttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatct 350  Q
    |||||||||||||| || || ||| |||| ||||| || ||  |||| ||  ||||||||||||||||||| ||||||||||||||  ||||||||||||    
T  26694833 tttctctcttttggtggccgcttgattctcctcaaatcagttctgacatctctgcctgtctatgccctttctttcttcaaagctccaacaggtataatct 26694734  T
Q  351 ctgtcattgaatct 364  Q
    ||  ||||||||||    
T  26694733 cttccattgaatct 26694720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 224 - 376
Target Start/End: Complemental strand, 19756199 - 19756047
Alignment:
Q  224 tctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttcct 323  Q
    |||||||| || || ||||||||||| || || ||||| || ||||| ||| |||| || ||||| ||| ||||  |  | ||||||||||| |||||||    
T  19756199 tctagattgtctggttggcaaagtcggttcctttctttcggtggtcgtttgattctactaaagtccgtcctgactgcgctacctgtctatgcactttcct 19756100  T
Q  324 tcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaa 376  Q
    | |||||| ||| ||||||||||||||||  |||||||||| | |||||||||    
T  19756099 ttttcaaaactctgtcaggtataatctcttccattgaatctttgtttaataaa 19756047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 224 - 376
Target Start/End: Original strand, 19783607 - 19783759
Alignment:
Q  224 tctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttcct 323  Q
    |||||||| || || ||||||||||| || || ||||| || ||||| ||| |||| || ||||| ||| ||||  |  | ||||||||||| |||||||    
T  19783607 tctagattgtctggttggcaaagtcggttcctttctttcggtggtcgtttgattctactaaagtccgtcctgactgcgctacctgtctatgcactttcct 19783706  T
Q  324 tcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaa 376  Q
    | |||||| ||| ||||||||||||||||  |||||||||| | |||||||||    
T  19783707 ttttcaaaactctgtcaggtataatctcttccattgaatctttgtttaataaa 19783759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 352
Target Start/End: Complemental strand, 42779122 - 42779054
Alignment:
Q  284 aagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctct 352  Q
    |||||||| ||||||||  || |||||||||| |||||||||||||||||||| |||||||||||||||    
T  42779122 aagtctgttttgacctctctgtctgtctatgcgctttccttcttcaaagctccatcaggtataatctct 42779054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 273 - 352
Target Start/End: Original strand, 10562581 - 10562660
Alignment:
Q  273 tggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctct 352  Q
    |||||||| | ||||||||  |||||||  || |||||||||| |||||||||||||||||||| |||||||||||||||    
T  10562581 tggttcttttaaagtctgttctgacctctctgtctgtctatgcgctttccttcttcaaagctccatcaggtataatctct 10562660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 266 - 369
Target Start/End: Original strand, 19308837 - 19308940
Alignment:
Q  266 ggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatcta 365  Q
    ||||| ||| ||||||| ||||||||| || | ||| |||||||||| |||||||| || |||| ||||||  ||||||||||||||  |||||||||||    
T  19308837 ggtcgcttgattcttcttaagtctgtcctgtcttcactgcctgtctacgccctttcttttttcagagctcccgcaggtataatctcttccattgaatcta 19308936  T
Q  366 tttt 369  Q
    ||||    
T  19308937 tttt 19308940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 305 - 364
Target Start/End: Complemental strand, 48312945 - 48312886
Alignment:
Q  305 cctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatct 364  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||  ||||||||||    
T  48312945 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctcttccattgaatct 48312886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 305 - 364
Target Start/End: Original strand, 54482449 - 54482508
Alignment:
Q  305 cctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatct 364  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||  ||||||||||    
T  54482449 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctcttccattgaatct 54482508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 224 - 503
Target Start/End: Complemental strand, 2365937 - 2365659
Alignment:
Q  224 tctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttcct 323  Q
    |||||||| || || ||| | ||||| ||||| |||||||| ||||| |||||| | || |||||||||||||| || || ||||||||||  || ||||    
T  2365937 tctagattgtctggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctgtcttgacttccttacctgtctatgttctctcct 2365838  T
Q  324 tcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaatttcctgggtcgc 423  Q
    | |||||| ||| ||||||||||||||||   ||||| ||| |||| |||||         |||||||||||||||  | ||||||||||| ||| | |     
T  2365837 ttttcaaa-ctctgtcaggtataatctcttctattgagtctcttttaaataatttttttttgggagggagtgaggaacataggaaaatttcttggattgg 2365739  T
Q  424 ttggaactctgtttgtttacgaaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgttag 503  Q
    ||||||   ||||||||||   |||||| ||||| | ||||| || ||  || |||| |||||||||| |||||| ||||    
T  2365738 ttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagtttaatattgctttattag 2365659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 302 - 364
Target Start/End: Original strand, 42952817 - 42952879
Alignment:
Q  302 ttgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatct 364  Q
    |||||||||||||| ||||||||||| |||||||| |||||||||||||||  ||||||||||    
T  42952817 ttgcctgtctatgctctttccttctttaaagctccatcaggtataatctcttccattgaatct 42952879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 287 - 508
Target Start/End: Original strand, 7662579 - 7662800
Alignment:
Q  287 tctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggg 386  Q
    ||||||||||| ||  | ||||||||||||||||| |||||||||||||| ||||||||||| |||  | |||||||| | |||||| |        |||    
T  7662579 tctgtcttgacttctctacctgtctatgccctttctttcttcaaagctccatcaggtataatttcttcccttgaatctttatttaatcattttttttggg 7662678  T
Q  387 gaggga-gtgaggataacaggaaaatttcctgggtcgcttggaactctgtttgtttacgaaaggagtatggagggttgggagtgagacagctgagggagt 485  Q
     ||||| |||||||| | || |||||| | ||| | |  |||||   ||||||||    ||||||| ||||||| ||||| ||||||||| ||| ||| |    
T  7662679 -agggatgtgaggatcatagaaaaattacttggataggctggaaaattgtttgttccacaaaggagaatggaggtttgggggtgagacagttgaaggaat 7662777  T
Q  486 ttaatagtgctttgttaggtaaa 508  Q
    |||||||||||||||||||||||    
T  7662778 ttaatagtgctttgttaggtaaa 7662800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 226 - 335
Target Start/End: Original strand, 55464091 - 55464200
Alignment:
Q  226 tagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttc 325  Q
    |||||| || |||||| | ||||||||| | |||||||| ||||| ||| | ||||| |||||||| ||||| ||  ||| ||||||||| |||||||||    
T  55464091 tagattgtctgggtgggagagtcgctttttttcttttggtggtcgtttgatccttcttaagtctgtattgacttctctgcatgtctatgctctttccttc 55464190  T
Q  326 ttcaaagctc 335  Q
    ||||||||||    
T  55464191 ttcaaagctc 55464200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 376
Target Start/End: Complemental strand, 15741059 - 15741000
Alignment:
Q  317 ctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaa 376  Q
    |||||||| |||||||||||||||||||||||||||  |||||||||| | |||||||||    
T  15741059 ctttcctttttcaaagctccgtcaggtataatctcttccattgaatctttgtttaataaa 15741000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 369
Target Start/End: Complemental strand, 40688998 - 40688867
Alignment:
Q  239 tggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaa-gctccg 337  Q
    ||||||||||| ||||| |||||||| ||||| ||| ||||| | ||||||||||||||  |  |  |||||||||| ||||||||||||||| |||||     
T  40688998 tggcaaagtcggtttctttcttttggaggtcgcttgattcttttaaagtctgtcttgactgcgctatctgtctatgctctttccttcttcaaaggctcca 40688899  T
Q  338 tcaggtataatctctgtcattgaatctatttt 369  Q
     |||||| |||||||  |||  ||||||||||    
T  40688898 gcaggtacaatctcttccataaaatctatttt 40688867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 251 - 345
Target Start/End: Original strand, 3129211 - 3129305
Alignment:
Q  251 tttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtat 345  Q
    ||||| || ||||| ||||| ||||| ||| | || ||||||||||| ||  ||||||||||||||||||| ||||||||| |||| ||||||||    
T  3129211 tttctttcctttggaggtcgtttggtacttttaaaatctgtcttgacttctctgcctgtctatgccctttctttcttcaaaactccatcaggtat 3129305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 239 - 369
Target Start/End: Original strand, 19162392 - 19162522
Alignment:
Q  239 tggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgt 338  Q
    ||||||||| | ||||| || ||||| ||||| ||| ||||| | |||| |||||||||| |  | ||||||||||| |||||||||||||| |||||      
T  19162392 tggcaaagtaggtttctttcctttggaggtcgcttgattcttttaaagtatgtcttgaccgcgctacctgtctatgctctttccttcttcaaggctccag 19162491  T
Q  339 caggtataatctctgtcattgaatctatttt 369  Q
    |||||| |||||||  ||| || ||||||||    
T  19162492 caggtacaatctcttccatagattctatttt 19162522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 306 - 352
Target Start/End: Complemental strand, 20396432 - 20396386
Alignment:
Q  306 ctgtctatgccctttccttcttcaaagctccgtcaggtataatctct 352  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||    
T  20396432 ctgtctatgcgctttccttcttcaaagctccatcaggtataatctct 20396386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 284 - 369
Target Start/End: Complemental strand, 19838007 - 19837922
Alignment:
Q  284 aagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttt 369  Q
    ||||||||| || | ||| |||||||||| |||||||| || |||| ||||||  ||||||||||||||  |||||||||||||||    
T  19838007 aagtctgtcctgtcttcactgcctgtctacgccctttcttttttcagagctcccgcaggtataatctctaccattgaatctatttt 19837922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 275 - 336
Target Start/End: Complemental strand, 29133744 - 29133683
Alignment:
Q  275 gttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctcc 336  Q
    |||||||| |||||||||||||||||  |  |||||||||| ||||||||||||||||||||    
T  29133744 gttcttcttaagtctgtcttgacctctctctctgtctatgctctttccttcttcaaagctcc 29133683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 276 - 376
Target Start/End: Original strand, 29328041 - 29328141
Alignment:
Q  276 ttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataa 375  Q
    ||||||| |||| ||||||||||||  | ||||||||||  |||||||||||||| |||||  || ||||||| |||   | ||||||||||||||||||    
T  29328041 ttcttctaaagtttgtcttgacctctctacctgtctatggtctttccttcttcaaggctccaacaagtataatttcttctactgaatctatttttaataa 29328140  T
Q  376 a 376  Q
    |    
T  29328141 a 29328141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 445 - 504
Target Start/End: Original strand, 3129418 - 3129477
Alignment:
Q  445 aaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgttagg 504  Q
    ||||||| ||||||| ||||| ||||||||||||  ||||||||||| ||||||||||||    
T  3129418 aaaggagcatggaggtttgggggtgagacagctgcaggagtttaataatgctttgttagg 3129477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 305 - 364
Target Start/End: Original strand, 55724996 - 55725055
Alignment:
Q  305 cctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatct 364  Q
    ||||||||||  |||||||| |||||||||||||| ||||||||||||  ||||||||||    
T  55724996 cctgtctatgttctttcctttttcaaagctccgtcgggtataatctcttccattgaatct 55725055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 412
Target Start/End: Complemental strand, 7447660 - 7447505
Alignment:
Q  257 tcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtca 356  Q
    ||||||||||| || ||| | |||||||| |||||| || | ||| ||| |||||| ||||||||||| |||| ||||||  || |||||||||||  ||    
T  7447660 tcttttgggggccgtttgatccttctcaaatctgtcctgtcttcactgcttgtctacgccctttcctttttcagagctcccgcaagtataatctcttcca 7447561  T
Q  357 ttgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaatt 412  Q
    |  |||||||| ||| |||        |||| ||||||||||||||||| ||||||    
T  7447560 tcaaatctattcttattaattttttttggggtgggagtgaggataacagaaaaatt 7447505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 371
Target Start/End: Original strand, 17826062 - 17826117
Alignment:
Q  316 cctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctattttta 371  Q
    |||||| |||||||||||||| |||||||| || ||| ||||||| ||||||||||    
T  17826062 cctttctttcttcaaagctccctcaggtatcatttctatcattgactctattttta 17826117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 303 - 345
Target Start/End: Original strand, 20509258 - 20509300
Alignment:
Q  303 tgcctgtctatgccctttccttcttcaaagctccgtcaggtat 345  Q
    ||||||| ||||||||||| |||||||| ||||||||||||||    
T  20509258 tgcctgtttatgccctttctttcttcaaggctccgtcaggtat 20509300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 302 - 376
Target Start/End: Original strand, 45636290 - 45636364
Alignment:
Q  302 ttgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaa 376  Q
    |||||||| ||||  ||||| || |||||||||||||||||||| || ||    |||||||||||||||||||||    
T  45636290 ttgcctgtttatgttctttcttttttcaaagctccgtcaggtatcatttcctctattgaatctatttttaataaa 45636364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 369
Target Start/End: Complemental strand, 14538374 - 14538269
Alignment:
Q  264 ggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatc 363  Q
    ||||||| ||| ||||||| || || ||| || | ||| || ||||||| |||||||| || |||| ||||||  |||||||||||| |  |||||||||    
T  14538374 ggggtcgcttgattcttcttaaatccgtcatgtcttcactgtctgtctacgccctttcttttttcagagctcccgcaggtataatctattccattgaatc 14538275  T
Q  364 tatttt 369  Q
    ||||||    
T  14538274 tatttt 14538269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Original strand, 13158220 - 13158252
Alignment:
Q  433 tgtttgtttacgaaaggagtatggagggttggg 465  Q
    ||||||||||| |||||||||||||||||||||    
T  13158220 tgtttgtttacaaaaggagtatggagggttggg 13158252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 284 - 352
Target Start/End: Original strand, 53486197 - 53486265
Alignment:
Q  284 aagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctct 352  Q
    ||||||||  |||||||  | ||||||||||   ||||||||||||||||||| ||| |||||||||||    
T  53486197 aagtctgttctgacctctcttcctgtctatgtgttttccttcttcaaagctccatcaagtataatctct 53486265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 123; Significance: 6e-63; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 233 - 508
Target Start/End: Original strand, 27218339 - 27218614
Alignment:
Q  233 tcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaag 332  Q
    ||||||||||||||||| ||||| ||||| |||||||| ||||||||||| |||||||||||||| ||  | | ||||||||| |||||||||||||| |    
T  27218339 tcggggtggcaaagtcgttttctatctttcgggggtcgcttggttcttcttaagtctgtcttgacttcgcttcatgtctatgcactttccttcttcaagg 27218438  T
Q  333 ctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaatttcctgggtcgcttggaactc 432  Q
    |||||||||||||||| ||| ||||||||||| | |||||||||       ||||||| ||||||||||||||||||||||||||| |||||| || |||    
T  27218439 ctccgtcaggtataatttctctcattgaatctttgtttaataaatttttttggggaggtagtgaggataacaggaaaatttcctggatcgcttagagctc 27218538  T
Q  433 tgtttgtttacgaaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgttaggtaaa 508  Q
    ||||||||||  |||||||| ||||||| |||| ||||| ||| || || | ||||||   |||||||||||||||    
T  27218539 tgtttgtttaaaaaaggagtttggagggctgggggtgaggcagttgcggaaatttaatttagctttgttaggtaaa 27218614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 32 - 491
Target Start/End: Original strand, 33820575 - 33821034
Alignment:
Q  32 atgtctggtttgcgagtgaattttcataagagtatgttggttggaattaatattcagaattcatggttgaatgaagcagcctctattttaaattgcaaag 131  Q
    |||||| |||||  ||| || |||||||| ||| | |||||||| |||||||||  | | || | ||||||||| || || || ||||| ||||| || |    
T  33820575 atgtctagtttgaaagtaaactttcataaaagtcttttggttggtattaatattgcggaatcttagttgaatgaggcggcttccattttgaattgtaagg 33820674  T
Q  132 ttggtaaagttccgtttctgtatctgggtctttctattggtggtgatccgaagaggttagccttttgggaacctgtgttgaagactgtaaagtctagatt 231  Q
    | | |||  ||| |||| |||||||||| ||| | ||||| || ||||    |||||||   || ||||| || || ||||| ||| | |||||||||||    
T  33820675 tggataagattctgtttgtgtatctgggccttccgattggaggagatcatcggaggttattgttctgggatccggttttgaatactattaagtctagatt 33820774  T
Q  232 atcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaa 331  Q
     ||| | |||||||  || ||||| ||||||| |||||||||| |||||||||| |||||| |||||||  ||||| ||||||  |||||||||||||||    
T  33820775 gtcgagatggcaaaaccgttttctatcttttgcgggtcggttgattcttctcaattctgtcctgacctctctgcctatctatgttctttccttcttcaaa 33820874  T
Q  332 gctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaatttcctgggtcgcttggaact 431  Q
    ||||| |||||||| ||||||  |||||||| ||||||||| |||       |||||||||||||| |||||||||||||||| ||| ||||||||| |     
T  33820875 gctccatcaggtattatctcttccattgaatttatttttaacaaaaatttttggggagggagtgagaataacaggaaaatttcttggctcgcttggagca 33820974  T
Q  432 ctgtttgtttacgaaaggagtatggagggttgggagtgagacagctgagggagtttaata 491  Q
    |||||||||  |||||||||| |||||||||||| || |||||  ||| |||||||||||    
T  33820975 ctgtttgttctcgaaaggagtttggagggttgggggtcagacacttgatggagtttaata 33821034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 259 - 504
Target Start/End: Original strand, 19544647 - 19544890
Alignment:
Q  259 ttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcatt 358  Q
    ||||||||| ||||||||||| || |||| |||||| |||||  || |||||||||| ||||||||||||||||||||| |  |||| || ||| |||||    
T  19544647 ttttgggggccggttggttctacttaagtttgtcttaacctctctgtctgtctatgctctttccttcttcaaagctccgccgagtatcatttctatcatt 19544746  T
Q  359 gaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaatttcctgggtcgcttggaactctgtttgtttacgaaaggagtatggag 458  Q
     ||||||||||||||| |        |||||||| |||||| |||||||||| |||||||||  |||||| |||| |||||||||| |||||||||||||    
T  19544747 aaatctatttttaatacaaaaatt--gggagggaatgaggagaacaggaaaacttcctgggtttcttggagctctatttgtttacgtaaggagtatggag 19544844  T
Q  459 ggttgggagtgagacagctgagggagtttaatagtgctttgttagg 504  Q
    |||| || || || ||| ||||||||||||||||||| || |||||    
T  19544845 ggttaggggtcaggcagttgagggagtttaatagtgccttattagg 19544890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 219 - 490
Target Start/End: Complemental strand, 45993513 - 45993241
Alignment:
Q  219 taaagtctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccct 318  Q
    ||||||||||| | || || ||| | ||||| || ||||||||||| ||||| |||||||||||||| ||||| ||||||||  ||||||||||||| ||    
T  45993513 taaagtctagactgtcaggttggaatagtcgtttcctctcttttggtggtcgtttggttcttctcaaatctgtgttgacctctctgcctgtctatgctct 45993414  T
Q  319 ttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataa-annnnnnnggggagggagtgaggataacaggaaaatttcctg 417  Q
    ||| ||||||||||||||||||||||||||||||  | |||||||| | ||||||||         |||| |||||||||||| | |||||||| || ||    
T  45993413 ttctttcttcaaagctccgtcaggtataatctctacccttgaatctttatttaataatttttttttggggtgggagtgaggatcataggaaaatgtcttg 45993314  T
Q  418 ggtcgcttggaactctgtttgtttacgaaaggagtatggagggttgggagtgagacagctgagggagtttaat 490  Q
    | | | |||||||||||||||| | |  ||||||| ||||||||| || || |||||| ||| ||||||||||    
T  45993313 gataggttggaactctgtttgtctccagaaggagtttggagggttaggggttagacagttgaaggagtttaat 45993241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 319 - 494
Target Start/End: Complemental strand, 34104314 - 34104139
Alignment:
Q  319 ttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaatttcctgg 418  Q
    |||||||||||||||||||||| |||| || ||| ||||||||||||||||||||| |       |||||||| ||||||| ||||||||||||||||||    
T  34104314 ttccttcttcaaagctccgtcaagtatcatttctatcattgaatctatttttaatacaaaattttggggagggcgtgaggagaacaggaaaatttcctgg 34104215  T
Q  419 gtcgcttggaactctgtttgtttacgaaaggagtatggagggttgggagtgagacagctgagggagtttaatagtg 494  Q
    || ||||||| |||| | |||||||| ||||||||||||||||| || || || ||  ||||||||||||||||||    
T  34104214 gttgcttggagctctatatgtttacgtaaggagtatggagggttaggggtcaggcatttgagggagtttaatagtg 34104139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 226 - 414
Target Start/End: Complemental strand, 17721565 - 17721377
Alignment:
Q  226 tagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttc 325  Q
    |||||| || || ||||||||||| || || |||||||| ||||| ||||||||||| ||||  ||| ||||  |  | ||||||||||| ||||||||     
T  17721565 tagattgtctggttggcaaagtcggttcctttcttttggtggtcgtttggttcttcttaagttcgtcctgactgctctacctgtctatgcactttccttt 17721466  T
Q  326 ttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaatttc 414  Q
    |||||||||||||||||||||||||||  |||||||||| | |||||||||       |||||||| |||||||||| || ||||||||    
T  17721465 ttcaaagctccgtcaggtataatctcttccattgaatctttgtttaataaatttttttggggagggggtgaggataaaagaaaaatttc 17721377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 224 - 376
Target Start/End: Original strand, 4937336 - 4937488
Alignment:
Q  224 tctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttcct 323  Q
    |||||||| || || ||||||||||| || || ||||| || ||||| ||| ||||||| ||||||||| ||||  |  | ||||||||||| |||||||    
T  4937336 tctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattcttctaaagtctgtcctgactgctctacctgtctatgcactttcct 4937435  T
Q  324 tcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaa 376  Q
    |||||||||||||| ||||||||||||||  |||||||||| | |||||||||    
T  4937436 tcttcaaagctccgacaggtataatctcttccattgaatctttgtttaataaa 4937488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 384 - 504
Target Start/End: Original strand, 39658755 - 39658875
Alignment:
Q  384 ggggagggagtgaggataacaggaaaatttcctgggtcgcttggaactctgtttgtttacgaaaggagtatggagggttgggagtgagacagctgaggga 483  Q
    |||||||||||||||||||||| ||||||| |||| | ||||||| ||| ||||||||||||||||||| |||||| ||||| ||||| ||| | |||||    
T  39658755 ggggagggagtgaggataacagaaaaattttctggattgcttggagctcagtttgtttacgaaaggagtttggaggattgggggtgaggcagttaaggga 39658854  T
Q  484 gtttaatagtgctttgttagg 504  Q
     |||||| ||||||| |||||    
T  39658855 atttaattgtgctttattagg 39658875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 224 - 351
Target Start/End: Complemental strand, 13440990 - 13440863
Alignment:
Q  224 tctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttcct 323  Q
    |||||| | ||||| ||| | ||||| |||||||||| ||| ||||| |||||||| ||||| | ||||||||||||  ||||||||||||| |||||||    
T  13440990 tctagactgtcgggttggaatagtcggtttctctcttgtggtggtcgcttggttctactcaaatatgtcttgacctctctgcctgtctatgcgctttcct 13440891  T
Q  324 tcttcaaagctccgtcaggtataatctc 351  Q
    |||||||||||||  |||||||||||||    
T  13440890 tcttcaaagctccagcaggtataatctc 13440863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 260 - 376
Target Start/End: Original strand, 41805003 - 41805119
Alignment:
Q  260 tttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattg 359  Q
    ||||| || ||||| |||||||| |||||||||||||||||  | ||||||||||| || ||||||||||| ||| ||||||||||||| |||  | |||    
T  41805003 tttggtggccggttagttcttctaaagtctgtcttgacctctctacctgtctatgctctctccttcttcaaggcttcgtcaggtataatttcttcccttg 41805102  T
Q  360 aatctatttttaataaa 376  Q
    | |||||||||| ||||    
T  41805103 actctatttttactaaa 41805119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 305 - 376
Target Start/End: Original strand, 11276537 - 11276608
Alignment:
Q  305 cctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaa 376  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||  |||||||||| | |||||||||    
T  11276537 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctcttccattgaatctttgtttaataaa 11276608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 305 - 376
Target Start/End: Complemental strand, 29968825 - 29968754
Alignment:
Q  305 cctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaa 376  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||  |||||||||| | |||||||||    
T  29968825 cctgtctatgctctttcctttttcaaagctccgtcaggtataatctcttccattgaatctttgtttaataaa 29968754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 270 - 376
Target Start/End: Original strand, 25018556 - 25018662
Alignment:
Q  270 ggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttt 369  Q
    |||| |||||||| ||||||||||||||||| || ||| ||||||  |||||||||||||| ||| ||||||||||||| |||  | |||| ||||||||    
T  25018556 ggttagttcttctaaagtctgtcttgacctctttacctatctatgttctttccttcttcaaggcttcgtcaggtataatttcttcccttgactctatttt 25018655  T
Q  370 taataaa 376  Q
    || ||||    
T  25018656 tactaaa 25018662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 239 - 369
Target Start/End: Original strand, 45164770 - 45164900
Alignment:
Q  239 tggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgt 338  Q
    ||||||||||| ||||| || ||||| ||||| ||| ||||| | ||||||||||||||| |  | ||||||||||| |||||||||||||| |||||      
T  45164770 tggcaaagtcggtttctttcctttggaggtcgcttgattcttttaaagtctgtcttgaccgcgctacctgtctatgctctttccttcttcaaggctccag 45164869  T
Q  339 caggtataatctctgtcattgaatctatttt 369  Q
    |||||| |||||||  ||| || ||||||||    
T  45164870 caggtacaatctcttccatagattctatttt 45164900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 300
Target Start/End: Complemental strand, 23888110 - 23887829
Alignment:
Q  19 tttgtttgaggggatgtctggtttgcgagtgaattttcataagagtatgttggttggaattaatattcagaattcatggttgaatgaagcagcctctatt 118  Q
    |||||||| ||| ||||||||||||  ||| || || ||||| ||  |  ||||||| |||||||||  | | || ||||||||| | || || ||||||    
T  23888110 tttgtttgcgggtatgtctggtttgaaagtaaacttccataaaagccttctggttggtattaatattgcggaatcttggttgaataaggcggcttctatt 23888011  T
Q  119 ttaaattgcaaagttggtaaagttccgtttctgtatctgggtctttctattggtggtgatccgaagaggttagccttttgggaacctgtgttgaagactg 218  Q
    || ||||  || || ||||| ||||||||| |||||||||| | | | ||||| || |||||  ||| ||||   || ||||| || || ||||| |||     
T  23888010 ttgaattttaaggtgggtaaggttccgtttgtgtatctgggccatccgattggaggagatcctcagatgttattgttctgggatccggttttgaatacta 23887911  T
Q  219 taaagtctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctc 300  Q
    | ||||||||||| ||| | ||||||||  | ||||| ||||||||||| || ||| ||||||||||||||||| |||||||    
T  23887910 tcaagtctagattgtcgagatggcaaagctggtttctatcttttgggggccgattgattcttctcaagtctgtcctgacctc 23887829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 307 - 375
Target Start/End: Complemental strand, 41340398 - 41340330
Alignment:
Q  307 tgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataa 375  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||  |||||||||| | ||||||||    
T  41340398 tgtctatgccctttccttcttcaaagcttcgtaaggtataatctcttccattgaatctttatttaataa 41340330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 287 - 508
Target Start/End: Complemental strand, 46626691 - 46626470
Alignment:
Q  287 tctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggg 386  Q
    ||||||||||| ||  | ||||||||||||||||| |||||||||||||| |||| ||||||||||  | |||||||| | ||||||||        |||    
T  46626691 tctgtcttgacttctctacctgtctatgccctttctttcttcaaagctccatcagatataatctcttcccttgaatctttatttaataattttttttggg 46626592  T
Q  387 gagggagtgaggataacaggaaaatttcctgggtcgcttggaactctgtttgtttacgaaaggagtatggagggttgggagtgagacagctgagggagtt 486  Q
    | || ||||||||| | || |||||| | |   | |  |||||  |||||||||    ||||||| ||||||| ||||| ||||||||  ||| ||| ||    
T  46626591 ggggaagtgaggatcatagaaaaattacttaaataggctggaaaactgtttgttccacaaaggagaatggaggtttgggggtgagacaattgaaggaatt 46626492  T
Q  487 taatagtgctttgttaggtaaa 508  Q
    ||||||||||||||||||||||    
T  46626491 taatagtgctttgttaggtaaa 46626470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 302 - 364
Target Start/End: Complemental strand, 19735372 - 19735310
Alignment:
Q  302 ttgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatct 364  Q
    |||||||||||||| ||||||||||| |||||||| |||||||||||||||  ||||||||||    
T  19735372 ttgcctgtctatgctctttccttctttaaagctccatcaggtataatctcttccattgaatct 19735310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 287 - 364
Target Start/End: Original strand, 28173254 - 28173331
Alignment:
Q  287 tctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatct 364  Q
    ||||| |||||||||||| |||||||||| ||||  ||||||||||||||||||| ||| ||||||  ||||||||||    
T  28173254 tctgttttgacctcattgtctgtctatgctctttttttcttcaaagctccgtcagatattatctcttccattgaatct 28173331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 284 - 352
Target Start/End: Complemental strand, 34232573 - 34232505
Alignment:
Q  284 aagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctct 352  Q
    ||||||||  |||||||  ||| ||||||||| |||||||||||||||||||| |||||||||||||||    
T  34232573 aagtctgttctgacctctctgcttgtctatgcgctttccttcttcaaagctccatcaggtataatctct 34232505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 364
Target Start/End: Original strand, 23054259 - 23054318
Alignment:
Q  305 cctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatct 364  Q
    ||||||||||| ||||||||||| ||||||| ||||||||||||||||  ||||||||||    
T  23054259 cctgtctatgcactttccttctttaaagctctgtcaggtataatctcttccattgaatct 23054318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 364
Target Start/End: Original strand, 36227440 - 36227499
Alignment:
Q  305 cctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatct 364  Q
    ||||||||||||||||| |||||||||||||| ||||||||||| |||  ||||||||||    
T  36227440 cctgtctatgccctttctttcttcaaagctccatcaggtataatttcttccattgaatct 36227499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 257 - 351
Target Start/End: Complemental strand, 17056428 - 17056334
Alignment:
Q  257 tcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctc 351  Q
    |||||||| |||||  ||||||| || |||||||||||| ||||  | |||||||||||  |||||||||||| ||| || ||||||||||||||    
T  17056428 tcttttggtggtcgtctggttctccttaagtctgtcttgtcctctcttcctgtctatgctttttccttcttcagagcaccatcaggtataatctc 17056334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 4078130 - 4078081
Alignment:
Q  303 tgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctct 352  Q
    ||||||||||||| ||||||||||||| |||||| |||||||||||||||    
T  4078130 tgcctgtctatgcgctttccttcttcagagctccatcaggtataatctct 4078081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 266 - 420
Target Start/End: Complemental strand, 4164929 - 4164775
Alignment:
Q  266 ggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatcta 365  Q
    ||||| ||| |||| || ||||||||| || | ||  |||||||||| |||||||| || |||| ||||||  ||||||||||||||  |||||||||||    
T  4164929 ggtcgcttgattctccttaagtctgtcctgtcttcgctgcctgtctacgccctttcttttttcagagctcccgcaggtataatctcttccattgaatcta 4164830  T
Q  366 tttttaataaannnnnnnggggagggagtgaggataacaggaaaatttcctgggt 420  Q
    |||| | ||||       |||| |||||||||||| | || |||||| |||||||    
T  4164829 ttttaattaaatttttttggggtgggagtgaggatcatagaaaaattgcctgggt 4164775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 266 - 420
Target Start/End: Complemental strand, 34207220 - 34207066
Alignment:
Q  266 ggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatcta 365  Q
    ||||| ||| |||| || ||||||||| || | ||  |||||||||| |||||||| || |||| ||||||  ||||||||||||||  |||||||||||    
T  34207220 ggtcgcttgattctccttaagtctgtcctgtcttcgctgcctgtctacgccctttcttttttcagagctcccgcaggtataatctcttccattgaatcta 34207121  T
Q  366 tttttaataaannnnnnnggggagggagtgaggataacaggaaaatttcctgggt 420  Q
    |||| | ||||       |||| |||||||||||| | || |||||| |||||||    
T  34207120 ttttaattaaatttttttggggtgggagtgaggatcatagaaaaattgcctgggt 34207066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 444 - 508
Target Start/End: Original strand, 15653136 - 15653199
Alignment:
Q  444 gaaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgttaggtaaa 508  Q
    |||||||| ||||||| ||||| ||||||||| ||| ||| ||||||||||||||||||||||||    
T  15653136 gaaaggagaatggaggtttggg-gtgagacagttgaaggaatttaatagtgctttgttaggtaaa 15653199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 345
Target Start/End: Original strand, 34791964 - 34792004
Alignment:
Q  305 cctgtctatgccctttccttcttcaaagctccgtcaggtat 345  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  34791964 cctgtctatgccctttccttcttcaaagctccctcaggtat 34792004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 317 - 364
Target Start/End: Complemental strand, 31423433 - 31423386
Alignment:
Q  317 ctttccttcttcaaagctccgtcaggtataatctctgtcattgaatct 364  Q
    |||||||| |||||||||||||||||||||||||||  ||||||||||    
T  31423433 ctttcctttttcaaagctccgtcaggtataatctcttccattgaatct 31423386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 305 - 376
Target Start/End: Complemental strand, 45871614 - 45871543
Alignment:
Q  305 cctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaa 376  Q
    ||||| ||||| |||||||||||||||||||| |||||||| || |||   ||||||||||| |||||||||    
T  45871614 cctgtttatgctctttccttcttcaaagctccttcaggtattatttcttctattgaatctatatttaataaa 45871543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 307 - 352
Target Start/End: Original strand, 2820012 - 2820057
Alignment:
Q  307 tgtctatgccctttccttcttcaaagctccgtcaggtataatctct 352  Q
    ||||||||  ||||||||||||||||| ||||||||||||||||||    
T  2820012 tgtctatgttctttccttcttcaaagccccgtcaggtataatctct 2820057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 276 - 369
Target Start/End: Original strand, 6335652 - 6335745
Alignment:
Q  276 ttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttt 369  Q
    ||||||| ||||||||||||||  | || ||||||||||| |||||||||||||| |||||  || ||| |||||||  ||| |||||| ||||    
T  6335652 ttcttctaaagtctgtcttgactgcgttacctgtctatgctctttccttcttcaaggctccagcatgtacaatctcttccatagaatctctttt 6335745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 306 - 375
Target Start/End: Complemental strand, 18672021 - 18671952
Alignment:
Q  306 ctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataa 375  Q
    |||||||||  ||||||||||||||||||   |||||||||||||||  |||||||||| | ||||||||    
T  18672021 ctgtctatgatctttccttcttcaaagctatatcaggtataatctcttccattgaatctttatttaataa 18671952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 303 - 364
Target Start/End: Complemental strand, 18768261 - 18768200
Alignment:
Q  303 tgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatct 364  Q
    ||||||||||||| ||||| ||||||||||||||  || |||||||||||  ||||||||||    
T  18768261 tgcctgtctatgctctttctttcttcaaagctccaacaagtataatctcttccattgaatct 18768200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 384 - 465
Target Start/End: Complemental strand, 20918731 - 20918650
Alignment:
Q  384 ggggagggagtgaggataacaggaaaatttcctgggtcgcttggaactctgtttgtttacgaaaggagtatggagggttggg 465  Q
    ||||||||||||||||||| ||||||||||| ||  | | ||||||   |||||||||| ||||||||| | ||||||||||    
T  20918731 ggggagggagtgaggataataggaaaatttcttgcattggttggaaaaatgtttgtttaggaaaggagtctagagggttggg 20918650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 257 - 346
Target Start/End: Original strand, 22818958 - 22819047
Alignment:
Q  257 tcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtata 346  Q
    |||||||| |||||  | |||||||| ||| ||||| || ||||  | ||||||||||| ||||||||||||| |||||| |||||||||    
T  22818958 tcttttggtggtcgtctagttcttcttaaggctgtcctgtcctctcttcctgtctatgcactttccttcttcagagctccatcaggtata 22819047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 95 - 300
Target Start/End: Complemental strand, 23899210 - 23899005
Alignment:
Q  95 tggttgaatgaagcagcctctattttaaattgcaaagttggtaaagttccgtttctgtatctgggtctttctattggtggtgatccgaagaggttagcct 194  Q
    ||||||||| | || || |||||||| ||||  || || ||||| ||||||||| |||||||||| | | | ||||| || |||||   || ||||   |    
T  23899210 tggttgaataaggcggcttctattttgaattttaaggtgggtaaggttccgtttgtgtatctgggccatccgattggaggagatcctctgatgttattgt 23899111  T
Q  195 tttgggaacctgtgttgaagactgtaaagtctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtctt 294  Q
    | ||||| || || ||||| ||| | ||||||||||| ||| | ||||||||  | ||||| |||||||||||  | ||| ||||||||||||||||| |    
T  23899110 tctgggatccggttttgaatactatcaagtctagattgtcgagatggcaaagctggtttctatcttttgggggctgattgattcttctcaagtctgtcct 23899011  T
Q  295 gacctc 300  Q
    ||||||    
T  23899010 gacctc 23899005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 307 - 352
Target Start/End: Complemental strand, 29917069 - 29917024
Alignment:
Q  307 tgtctatgccctttccttcttcaaagctccgtcaggtataatctct 352  Q
    ||||||||| |||||||||||||||||||| ||||||| |||||||    
T  29917069 tgtctatgcactttccttcttcaaagctccctcaggtacaatctct 29917024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 307 - 352
Target Start/End: Original strand, 39930887 - 39930932
Alignment:
Q  307 tgtctatgccctttccttcttcaaagctccgtcaggtataatctct 352  Q
    ||||||||| |||||||||||||||||||| ||| |||||||||||    
T  39930887 tgtctatgctctttccttcttcaaagctccatcatgtataatctct 39930932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 431 - 508
Target Start/End: Original strand, 39931011 - 39931088
Alignment:
Q  431 tctgtttgtttacgaaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgttaggtaaa 508  Q
    |||||||||||  |||||||||||||||||||||| || ||   | |||||||| |||||| |||| |||||||||||    
T  39931011 tctgtttgtttgagaaaggagtatggagggttgggggttaggaggttgagggagcttaatattgctctgttaggtaaa 39931088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 444 - 504
Target Start/End: Complemental strand, 23887795 - 23887735
Alignment:
Q  444 gaaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgttagg 504  Q
    |||| |||| |||||||||||| || |||||| |||||||||||||||  |||||||||||    
T  23887795 gaaatgagtttggagggttgggggtcagacagttgagggagtttaatatagctttgttagg 23887735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 444 - 504
Target Start/End: Complemental strand, 23898971 - 23898911
Alignment:
Q  444 gaaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgttagg 504  Q
    |||| |||| |||||||||||| || |||||| |||||||||||||||  |||||||||||    
T  23898971 gaaatgagtttggagggttgggggtcagacagttgagggagtttaatatagctttgttagg 23898911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 28172987 - 28173042
Alignment:
Q  20 ttgtttgaggggatgtctggtttgcgagtgaattttcataagagtatgttggttgg 75  Q
    |||||||||| |||||||||||||  ||| ||||||||||| |||||| |||||||    
T  28172987 ttgtttgaggtgatgtctggtttgaaagtcaattttcataaaagtatgctggttgg 28173042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 303 - 374
Target Start/End: Original strand, 28740222 - 28740293
Alignment:
Q  303 tgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaata 374  Q
    ||||||| ||||| |||||||||||||||||||| | |||||||||| |    |||||||||||||| ||||    
T  28740222 tgcctgtttatgctctttccttcttcaaagctcccttaggtataatcccatctattgaatctattttaaata 28740293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 376
Target Start/End: Complemental strand, 4344695 - 4344630
Alignment:
Q  311 tatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaa 376  Q
    |||||| ||| ||| ||||||||||| ||| |||||||||||   ||||||||||| |||||||||    
T  4344695 tatgccattttctttttcaaagctccctcatgtataatctcttctattgaatctatgtttaataaa 4344630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 369
Target Start/End: Complemental strand, 45460184 - 45460099
Alignment:
Q  284 aagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttt 369  Q
    ||||||||| || | ||| ||||||| || |||||||| || |||| ||||||  ||||||||||||||  |||| ||||||||||    
T  45460184 aagtctgtcctgtcttcactgcctgtatacgccctttcttttttcagagctcccgcaggtataatctctaccatttaatctatttt 45460099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 90 - 182
Target Start/End: Complemental strand, 17056595 - 17056503
Alignment:
Q  90 attcatggttgaatgaagcagcctctattttaaattgcaaagttggtaaagttccgtttctgtatctgggtctttctattggtggtgatccga 182  Q
    |||| ||||||||||||||||| |||||  |   ||| ||||| || || ||||| ||| ||||| || ||||||| ||||||||||||||||    
T  17056595 attcttggttgaatgaagcagcgtctatgcttggttgtaaagtgggaaaggttccctttttgtatttgagtctttcgattggtggtgatccga 17056503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 317 - 373
Target Start/End: Original strand, 18317138 - 18317194
Alignment:
Q  317 ctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaat 373  Q
    |||||||||||||| || || ||| ||||||||||| || || ||||||||||||||    
T  18317138 ctttccttcttcaaggccccctcaagtataatctctatccttaaatctatttttaat 18317194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 369
Target Start/End: Original strand, 37942143 - 37942207
Alignment:
Q  305 cctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttt 369  Q
    |||||||||| | |||||||||||||||| ||||| ||||| ||||||   ||||||||| ||||    
T  37942143 cctgtctatgtcatttccttcttcaaagccccgtcgggtattatctcttatattgaatctctttt 37942207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 111; Significance: 9e-56; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 113 - 508
Target Start/End: Original strand, 33583525 - 33583919
Alignment:
Q  113 tctattttaaattgcaaagttggtaaagttccgtttctgtatctgggtctttctattggtggtgatccgaagaggttagccttttgggaacctgtgttga 212  Q
    ||||||||||| || || || |||||| ||  |||  |||||||  |||| || ||||| ||||||||   ||||||||| ||||| |||| |||| ||     
T  33583525 tctattttaaactgtaaggtgggtaaaattatgttcttgtatcttagtctatcgattggaggtgatcctcggaggttagcgttttgagaacatgtggtgt 33583624  T
Q  213 agactgtaaagtctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtcta 312  Q
      ||| | || |||||||| ||||||||||||||||| ||||| || |  ||||| ||||| ||| ||||||||| |||| |||||||  | ||||||||    
T  33583625 ctactattaaatctagattgtcggggtggcaaagtcgatttctatcatccgggggccggttcgtttttctcaagtttgtcctgacctcgcttcctgtcta 33583724  T
Q  313 tgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaatt 412  Q
    ||| |||||||| |||||||||||||||||||||||||||  ||| |||||| ||||||||             ||||| ||||||||||||||||||||    
T  33583725 tgctctttcctttttcaaagctccgtcaggtataatctcttccat-gaatctgtttttaatttttttttttttagagggtgtgaggataacaggaaaatt 33583823  T
Q  413 tcctgggtcgcttggaactctgtttgtttacgaaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgttaggtaaa 508  Q
    |||||| | ||||||| |||||||||||||| ||||||||||||||||||||| || || ||| |||||||||||||||  ||||||||| |||||    
T  33583824 tcctggattgcttggagctctgtttgtttacaaaaggagtatggagggttgggggtaaggcagttgagggagtttaatatagctttgttaagtaaa 33583919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 46 - 490
Target Start/End: Complemental strand, 6824519 - 6824077
Alignment:
Q  46 agtgaattttcataagagtatgttggttggaattaatattcagaattcatggttgaatgaagcagcctctattttaaattgcaaagttggtaaagttccg 145  Q
    |||||| |||||||| ||  | |||||||| ||||||||   | ||||||||||||   | ||||| |||||||||||||| ||||| || ||| | |||    
T  6824519 agtgaactttcataaaagcttattggttggtattaatataggggattcatggttgacaaaggcagcatctattttaaattgtaaagtgggcaaaataccg 6824420  T
Q  146 tttctgtatctgggtctttctattggtggtgatccgaagaggttagccttttgggaacctgtgttgaagactgtaaagtctagattatcggggtggcaaa 245  Q
    ||  ||||||| ||| | || ||||| ||||||||  | || |||| |||||||||||||||| ||   | | | ||||||||| || ||||||||||||    
T  6824419 ttcatgtatcttggtttgtcaattggaggtgatccacacagattagtcttttgggaacctgtggtgtctaatattaagtctagactaacggggtggcaaa 6824320  T
Q  246 gtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtat 345  Q
     ||||||| | ||||| || || || || |||||||| || |||||| ||||| | |  ||||||||||| |||||||||||||||||||||||| ||||    
T  6824319 ttcgctttttatctttcggaggccgtttagttcttcttaaatctgtcctgaccgctt--cctgtctatgcactttccttcttcaaagctccgtcaagtat 6824222  T
Q  346 aatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaatttcctgggtcgcttggaactctgtttgtttacga 445  Q
     || ||| ||||||| | ||||||||  |||       ||||||||||||||||||||||||||||||||| | | |||| ||| ||| |||||| |  |    
T  6824221 tatttctctcattgattttatttttacaaaaaaaaattggggagggagtgaggataacaggaaaatttcctcgattgcttagaattctatttgttcaaaa 6824122  T
Q  446 aaggagtatggagggttgggagtgagacagctgagggagtttaat 490  Q
    |||||| ||| ||||||||||||||| ||| ||| ||||||||||    
T  6824121 aaggagcatgaagggttgggagtgaggcagttgaaggagtttaat 6824077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 237 - 465
Target Start/End: Complemental strand, 11197271 - 11197042
Alignment:
Q  237 ggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctcc 336  Q
    |||||||||| || ||||| || | ||| ||||||||||| ||||| ||||||||| |||||   ||   ||| ||||| ||||| |||||||| |||||    
T  11197271 ggtggcaaagccgttttctttcatatggaggtcggttggtccttctgaagtctgtcctgaccgtgttatttgtttatgctctttcattcttcaaggctcc 11197172  T
Q  337 gtcaggtataatctctgtcattgaatctatttttaataaannnnnnn-ggggagggagtgaggataacaggaaaatttcctgggtcgcttggaactctgt 435  Q
    |||||||||||||||| ||||||||||||| ||||||| |        ||||||||||||||||||||||||||||||||| | | ||||||| ||||||    
T  11197171 gtcaggtataatctctatcattgaatctatgtttaatacattttttttggggagggagtgaggataacaggaaaatttcctagattgcttggagctctgt 11197072  T
Q  436 ttgtttacgaaaggagtatggagggttggg 465  Q
    ||||||  | | ||||||||||||||||||    
T  11197071 ttgtttgtgtagggagtatggagggttggg 11197042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 245 - 351
Target Start/End: Complemental strand, 13551493 - 13551387
Alignment:
Q  245 agtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggta 344  Q
    ||||| ||||| |||||||| ||||| |||||||||||||| |||||| ||||||| |||||||||||||| |||||||||||||||||||| |||||||    
T  13551493 agtcggtttctatcttttggtggtcgcttggttcttctcaaatctgtcctgacctctttgcctgtctatgcactttccttcttcaaagctccatcaggta 13551394  T
Q  345 taatctc 351  Q
    |||||||    
T  13551393 taatctc 13551387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 228 - 504
Target Start/End: Complemental strand, 15018605 - 15018329
Alignment:
Q  228 gattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttctt 327  Q
    |||| ||||| ||| | ||||| || ||||||||||| ||  | |||||| |||||||  |||||||||| ||   |||||||||||| |||||||||||    
T  15018605 gattgtcgggttggaatagtcgtttcctctcttttggtggctgcttggttgttctcaaagctgtcttgacttctcggcctgtctatgcactttccttctt 15018506  T
Q  328 caaagctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaatttcctgggtcgcttgg 427  Q
    |||||||||||||||||||||||||  |||||||||| | |||||||         |||  ||| |||||||| | |||||||| || ||| | ||||||    
T  15018505 caaagctccgtcaggtataatctctaccattgaatctttatttaatatttttttttgggatgggggtgaggattataggaaaatatcttggatagcttgg 15018406  T
Q  428 aactctgtttgtttacgaaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgttagg 504  Q
    |  ||||||||| | | |||||||| |||||||||  | || |||||| ||| ||||||||||| ||| || |||||    
T  15018405 agttctgtttgtctccaaaaggagtttggagggttatgggttagacagttgaaggagtttaatattgccttattagg 15018329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 270 - 376
Target Start/End: Complemental strand, 26147101 - 26146995
Alignment:
Q  270 ggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttt 369  Q
    |||| |||||||| |||||||||||||||||  | ||||||||||| |||||||||||||| ||||||||||||||||| |||  | |||| ||||||||    
T  26147101 ggttagttcttctaaagtctgtcttgacctctctacctgtctatgctctttccttcttcaaggctccgtcaggtataatttcttccgttgactctatttt 26147002  T
Q  370 taataaa 376  Q
    || ||||    
T  26147001 tactaaa 26146995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 245 - 352
Target Start/End: Original strand, 25380622 - 25380730
Alignment:
Q  245 agtcgctttctctcttttggg-ggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggt 343  Q
    ||||| |||||||||||| || || || |||||||||||||| ||||||||||| |   ||||| ||||||| ||||| |||||||||||||| ||||||    
T  25380622 agtcgttttctctctttttggcggccgcttggttcttctcaaatctgtcttgacttatctgcctctctatgcactttctttcttcaaagctccatcaggt 25380721  T
Q  344 ataatctct 352  Q
    |||||||||    
T  25380722 ataatctct 25380730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 287 - 508
Target Start/End: Complemental strand, 45422389 - 45422168
Alignment:
Q  287 tctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggg 386  Q
    ||||||||||| ||  | ||||||||||||||||| |||||||||||||| ||||||||||| |||  | |||||||| | |||||| |        |||    
T  45422389 tctgtcttgacttctctacctgtctatgccctttctttcttcaaagctccatcaggtataatttcttcccttgaatctttatttaatcattttttttggg 45422290  T
Q  387 gagggagtgaggataacaggaaaatttcctgggtcgcttggaactctgtttgtttacgaaaggagtatggagggttgggagtgagacagctgagggagtt 486  Q
    | ||  |||||||| | || |||||| | ||| | |  |||||  |||||||||    ||||||| ||||||| ||||| ||||||||| ||| ||| ||    
T  45422289 ggggatgtgaggatcatagaaaaattacttggataggctggaaaactgtttgttccacaaaggagaatggaggtttgggggtgagacagttgaaggaatt 45422190  T
Q  487 taatagtgctttgttaggtaaa 508  Q
    ||||||||||||||||||||||    
T  45422189 taatagtgctttgttaggtaaa 45422168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 257 - 376
Target Start/End: Complemental strand, 34357707 - 34357588
Alignment:
Q  257 tcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtca 356  Q
    |||||||| ||||| ||  |||||||||||||| | |||||||  || ||||||||||| |||||||||||||| ||||||| || |||||| |||  ||    
T  34357707 tcttttggtggtcgtttaattcttctcaagtctcttttgacctttttacctgtctatgctctttccttcttcaaggctccgttagatataatttcttcca 34357608  T
Q  357 ttgaatctatttttaataaa 376  Q
    |||||| |||||||| ||||    
T  34357607 ttgaatttatttttagtaaa 34357588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 239 - 369
Target Start/End: Complemental strand, 13416603 - 13416473
Alignment:
Q  239 tggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgt 338  Q
    ||||||||||| ||||| || ||||| ||||| ||| ||||||| |||||| |||||||| |  | | ||||||||| |||||||||||||| |||||      
T  13416603 tggcaaagtcggtttctttcatttggaggtcgcttgattcttctaaagtctatcttgaccgcgctacatgtctatgctctttccttcttcaaggctccag 13416504  T
Q  339 caggtataatctctgtcattgaatctatttt 369  Q
    |||||| |||||||  ||| |||||||||||    
T  13416503 caggtacaatctcttccatagaatctatttt 13416473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 251 - 364
Target Start/End: Complemental strand, 35488743 - 35488630
Alignment:
Q  251 tttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatct 350  Q
    ||||||||||| || || || ||| | |||||||| || ||  ||||||| ||||||||||||||  |||||||||| |||||||| |||||||||||||    
T  35488743 tttctctctttcggtggccgcttgatccttctcaaatcagttctgacctctttgcctgtctatgctttttccttctttaaagctccttcaggtataatct 35488644  T
Q  351 ctgtcattgaatct 364  Q
    ||  ||||||||||    
T  35488643 cttccattgaatct 35488630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 239 - 369
Target Start/End: Original strand, 2207045 - 2207175
Alignment:
Q  239 tggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgt 338  Q
    ||||||||||| ||||| || ||||| ||||| ||| ||||| | ||||| |||||| || |  | ||||||||||| |||||||||||||| |||||      
T  2207045 tggcaaagtcggtttctttcctttggaggtcgtttgattcttgtaaagtccgtcttgtccgcgctacctgtctatgctctttccttcttcaaggctccag 2207144  T
Q  339 caggtataatctctgtcattgaatctatttt 369  Q
    |||||| |||||||  |||||| ||||||||    
T  2207145 caggtacaatctcttccattgattctatttt 2207175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 56 - 178
Target Start/End: Original strand, 27335671 - 27335793
Alignment:
Q  56 cataagagtatgttggttggaattaatattcagaattcatggttgaatgaagcagcctctattttaaattgcaaagttggtaaagttccgtttctgtatc 155  Q
    |||||||| ||||||||||| ||||||||| |  | || ||||||||||||||  ||||| || ||  ||||||| |||| | |||||| ||| ||||||    
T  27335671 cataagagcatgttggttggtattaatattgatgagtcttggttgaatgaagctacctctgttatatcttgcaaaattgggagagttccatttatgtatc 27335770  T
Q  156 tgggtctttctattggtggtgat 178  Q
    | |||||| ||||||||||||||    
T  27335771 ttggtcttcctattggtggtgat 27335793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 270 - 376
Target Start/End: Complemental strand, 43311145 - 43311039
Alignment:
Q  270 ggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttt 369  Q
    |||| |||||||| |||||||| || | |||  | ||||||||||| |||||||||||||| ||||||||||||||||| |||  | |||| ||||||||    
T  43311145 ggttagttcttctaaagtctgtttttatctctctacctgtctatgctctttccttcttcaaggctccgtcaggtataatttcttcccttgactctatttt 43311046  T
Q  370 taataaa 376  Q
    || ||||    
T  43311045 tactaaa 43311039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 254 - 363
Target Start/End: Original strand, 22724677 - 22724786
Alignment:
Q  254 ctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctg 353  Q
    ||||||||||| ||  | ||||||||||| || || ||| |||||||  || |||||||||| ||||||||||| |||||| ||| |||||||||||||     
T  22724677 ctctcttttggtggctgattggttcttcttaaatcagtcatgacctctctgtctgtctatgctctttccttctttaaagcttcgttaggtataatctcta 22724776  T
Q  354 tcattgaatc 363  Q
     |||||||||    
T  22724777 ccattgaatc 22724786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 224 - 364
Target Start/End: Original strand, 28399758 - 28399898
Alignment:
Q  224 tctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttcct 323  Q
    |||||| | ||||| ||||| ||| | |||||||||||||| || || ||| |||| || || || ||  |||| ||  ||||||||||||| ||||| |    
T  28399758 tctagactgtcgggttggcatagtaggtttctctcttttggtggacgtttgattctcctaaaatcagttctgacatctctgcctgtctatgctctttctt 28399857  T
Q  324 tcttcaaagctccgtcaggtataatctctgtcattgaatct 364  Q
    |||||||||||||  ||||||||||||||  ||||||||||    
T  28399858 tcttcaaagctccagcaggtataatctcttccattgaatct 28399898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 364
Target Start/End: Complemental strand, 12646401 - 12646342
Alignment:
Q  305 cctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatct 364  Q
    ||||||||||| |||||||| |||||||||||| ||||||||||||||  ||||||||||    
T  12646401 cctgtctatgctctttcctttttcaaagctccgccaggtataatctcttccattgaatct 12646342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 303 - 369
Target Start/End: Original strand, 3153106 - 3153172
Alignment:
Q  303 tgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttt 369  Q
    |||||||||| |||||||| || |||||||||||  ||||||||||||||  |||||||||||||||    
T  3153106 tgcctgtctacgccctttcttttttcaaagctcccgcaggtataatctcttccattgaatctatttt 3153172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 251 - 333
Target Start/End: Original strand, 4222175 - 4222257
Alignment:
Q  251 tttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagc 333  Q
    ||||| || |||||||||||  |||||||||||||||||||| || ||||  | | ||||||||| |||||||||||||||||    
T  4222175 tttctttcatttgggggtcgtctggttcttctcaagtctgtcatgtcctccattcttgtctatgctctttccttcttcaaagc 4222257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 306 - 364
Target Start/End: Original strand, 8065551 - 8065609
Alignment:
Q  306 ctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatct 364  Q
    ||||||||||  ||||||||||||||||||| |||||||||||||||  ||||||||||    
T  8065551 ctgtctatgctttttccttcttcaaagctccatcaggtataatctcttccattgaatct 8065609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 10689419 - 10689346
Alignment:
Q  275 gttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataat 348  Q
    |||||||| |||| ||||||||||||  | ||||||||||| |||||||||||||| | ||||||| |||||||    
T  10689419 gttcttctaaagtatgtcttgacctctctacctgtctatgctctttccttcttcaaggatccgtcatgtataat 10689346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 352
Target Start/End: Original strand, 33515396 - 33515529
Alignment:
Q  219 taaagtctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccct 318  Q
    |||| |||||||| || || ||||| ||||| || || ||||||||  ||||  || |||||| ||| || ||| ||||  || | ||||||||||| ||    
T  33515396 taaaatctagattgtctggttggcatagtcggttcctttcttttggtagtcgtctgattcttcgcaaatccgtcctgactgcacttcctgtctatgcact 33515495  T
Q  319 ttccttcttcaaagctccgtcaggtataatctct 352  Q
    |||||| ||||||||||||||||||| |||||||    
T  33515496 ttcctttttcaaagctccgtcaggtacaatctct 33515529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 345
Target Start/End: Original strand, 20946830 - 20946918
Alignment:
Q  257 tcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtat 345  Q
    ||||| |||||||| |||||| | || || |||||| || | || |||||||| ||||||||||| || ||||||||||||||||||||    
T  20946830 tctttcgggggtcgcttggttttactgaaatctgtcctgtcgtcgttgcctgtttatgccctttcttttttcaaagctccgtcaggtat 20946918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 245 - 364
Target Start/End: Complemental strand, 28253640 - 28253521
Alignment:
Q  245 agtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggta 344  Q
    ||||| |||||||||||||| |||||  |  | ||||||||||| ||| ||||  |  | | ||||||||| |||||||| ||||||| | |||||||||    
T  28253640 agtcggtttctctcttttggtggtcgcctaatccttctcaagtccgtcctgactgctcttcatgtctatgcactttcctttttcaaagtttcgtcaggta 28253541  T
Q  345 taatctctgtcattgaatct 364  Q
    ||||||||  ||||||||||    
T  28253540 taatctcttccattgaatct 28253521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 311 - 370
Target Start/End: Original strand, 43722321 - 43722380
Alignment:
Q  311 tatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctattttt 370  Q
    ||||| |||||||||||||| ||||||||||||||||| |||  |||||| |||||||||    
T  43722321 tatgctctttccttcttcaaggctccgtcaggtataatttcttccattgattctattttt 43722380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 239 - 369
Target Start/End: Original strand, 6724855 - 6724985
Alignment:
Q  239 tggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgt 338  Q
    ||||||||||| ||||| || ||||| ||||| ||| ||||| | |||| |||||||| |    | ||||||||||| |||||||||||||| |||||      
T  6724855 tggcaaagtcggtttctttcatttggaggtcgtttgattcttttaaagtatgtcttgatcgtgctacctgtctatgctctttccttcttcaaggctccag 6724954  T
Q  339 caggtataatctctgtcattgaatctatttt 369  Q
    |||||| |||||||  ||| || ||||||||    
T  6724955 caggtacaatctcttccatagattctatttt 6724985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 302 - 364
Target Start/End: Original strand, 11233775 - 11233837
Alignment:
Q  302 ttgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatct 364  Q
    |||||||| ||||| ||||||||||| |||||||| ||||||||| |||||  ||||||||||    
T  11233775 ttgcctgtttatgctctttccttctttaaagctccatcaggtatagtctcttccattgaatct 11233837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 239 - 369
Target Start/End: Original strand, 44028436 - 44028566
Alignment:
Q  239 tggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgt 338  Q
    ||||||||||| |||||||| || || |  || ||  |||| || ||||||||||||||| |  |  |||||||||| |||||||||||||| ||||| |    
T  44028436 tggcaaagtcggtttctctccttcggtgaccgtttaattctcctaaagtctgtcttgaccgctctatctgtctatgctctttccttcttcaaggctccat 44028535  T
Q  339 caggtataatctctgtcattgaatctatttt 369  Q
    || |||||||||||   ||||||||| ||||    
T  44028536 catgtataatctcttctattgaatctctttt 44028566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 490
Target Start/End: Original strand, 44028588 - 44028694
Alignment:
Q  384 ggggagggagtgaggataacaggaaaatttcctgggtcgcttggaactctgtttgtttacgaaaggagtatggagggttgggagtgagacagctgaggga 483  Q
    |||||||| |||||||| | || ||||| || ||||| |  ||||  | ||| ||||||||||||||||||||||| ||||| || |||||| ||| |||    
T  44028588 ggggagggggtgaggattatagaaaaatatcttgggtaggatggaggtatgtgtgtttacgaaaggagtatggaggtttgggtgttagacagttgaagga 44028687  T
Q  484 gtttaat 490  Q
    |||||||    
T  44028688 gtttaat 44028694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 273 - 333
Target Start/End: Complemental strand, 2282665 - 2282605
Alignment:
Q  273 tggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagc 333  Q
    ||||| |||| ||||||||| |||||||  | ||||| |||||||||||||||||||||||    
T  2282665 tggttattcttaagtctgtcatgacctctcttcctgtgtatgccctttccttcttcaaagc 2282605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 257 - 345
Target Start/End: Original strand, 10289307 - 10289395
Alignment:
Q  257 tcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtat 345  Q
    |||||||| |||||  | ||||| || ||||| ||| |||||||  | ||||||||||| |||||||||||||||||||| ||| ||||    
T  10289307 tcttttggtggtcgtcttgttctcctgaagtcggtcctgacctcgcttcctgtctatgctctttccttcttcaaagctccctcaagtat 10289395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 508
Target Start/End: Original strand, 11233919 - 11233982
Alignment:
Q  445 aaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgttaggtaaa 508  Q
    |||||||| |||||||||||| || ||  || ||||||||||||||  ||||||||||||||||    
T  11233919 aaaggagtctggagggttgggggttaggaagttgagggagtttaattttgctttgttaggtaaa 11233982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 352
Target Start/End: Complemental strand, 14440595 - 14440548
Alignment:
Q  305 cctgtctatgccctttccttcttcaaagctccgtcaggtataatctct 352  Q
    ||||| ||||| |||||||| || ||||||||||||||||||||||||    
T  14440595 cctgtttatgcactttccttttttaaagctccgtcaggtataatctct 14440548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 376
Target Start/End: Original strand, 12605693 - 12605803
Alignment:
Q  266 ggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatcta 365  Q
    ||||| |||||||| || ||||||||| || | |  |||||||| ||||||||||| || |||||||||||| |||| ||  | ||    ||||||||||    
T  12605693 ggtcgtttggttctgctaaagtctgtcatgtcattgttgcctgtttatgccctttcatttttcaaagctccgccaggcatcgtttcctctattgaatcta 12605792  T
Q  366 tttttaataaa 376  Q
    |||||||||||    
T  12605793 tttttaataaa 12605803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 305 - 351
Target Start/End: Original strand, 18669506 - 18669552
Alignment:
Q  305 cctgtctatgccctttccttcttcaaagctccgtcaggtataatctc 351  Q
    |||||||| |||||||| |||||||||||||  ||||||||||||||    
T  18669506 cctgtctacgccctttctttcttcaaagctctctcaggtataatctc 18669552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 45422644 - 45422591
Alignment:
Q  32 atgtctggtttgcgagtgaattttcataagagtatgttggttggaattaatatt 85  Q
    |||||||| |||  |||||||||| |||||||||||||||| || |||||||||    
T  45422644 atgtctgggttgaaagtgaattttaataagagtatgttggtggggattaatatt 45422591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 100; Significance: 3e-49; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 134 - 490
Target Start/End: Original strand, 63418 - 63773
Alignment:
Q  134 ggtaaagttccgtttctgtatctgggtctttctattggtggtgatccgaagaggttagccttttgggaacctgtgttgaagactgtaaagtctagattat 233  Q
    |||||| |||| ||||| ||||| |||||||| ||||||||||||||  | ||||||   ||||||||||| ||| |||| | | | ||  ||||| | |    
T  63418 ggtaaaattccttttctatatcttggtctttcgattggtggtgatcctcaaaggttaaatttttgggaacccgtgatgaataatattaaaactagaatgt 63517  T
Q  234 cggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagc 333  Q
    || ||||||| |||||||| || |||||||||||  ||||||| ||||| || |||||||||||||   | ||||| ||||| |||||||||||||| ||    
T  63518 cgtggtggcagagtcgcttcctatcttttgggggctggttggtccttctaaaatctgtcttgaccttgcttcctgtttatgctctttccttcttcaaggc 63617  T
Q  334 tccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaatttcctgggtcgcttggaactct 433  Q
    | | |||||||||||||||  |||||||||||||||| | ||        ||||||||||||||||||||||||||||||||||| |  |||| | ||||    
T  63618 ttcttcaggtataatctcttccattgaatctatttttta-aattttttttggggagggagtgaggataacaggaaaatttcctggtttacttgaagctct 63716  T
Q  434 gtttgtttacgaaaggagtatggagggttgggagtgagacagctgagggagtttaat 490  Q
     |||||||||  ||||||  |||||||||||| || || ||| ||||||||||||||    
T  63717 atttgtttactgaaggagggtggagggttgggggttaggcagttgagggagtttaat 63773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 225 - 374
Target Start/End: Complemental strand, 7022 - 6873
Alignment:
Q  225 ctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttcctt 324  Q
    |||||||  |||||||||||||||||||  | || || ||||| || ||  |||||||||| | ||||||||||||  | ||||||||||| ||||||||    
T  7022 ctagattggcggggtggcaaagtcgcttcttatccttcgggggccgtttaattcttctcaaatatgtcttgacctcgcttcctgtctatgctctttcctt 6923  T
Q  325 cttcaaagctccgtcaggtataatctctgtcattgaatctatttttaata 374  Q
     |||||||||||||||||||| || ||| |||||||||||||||||||||    
T  6922 tttcaaagctccgtcaggtatcatttctctcattgaatctatttttaata 6873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 224 - 376
Target Start/End: Original strand, 105051 - 105203
Alignment:
Q  224 tctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttcct 323  Q
    |||||||| || || ||||||||||| || || ||||| || ||||| ||| ||||||| ||||||||| ||||  |  | ||||||||||| |||||||    
T  105051 tctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattcttctaaagtctgtcctgactgctctacctgtctatgcactttcct 105150  T
Q  324 tcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaa 376  Q
    |||||||||||||| ||||||||||||||  |||||||||| | |||||||||    
T  105151 tcttcaaagctccgacaggtataatctcttccattgaatctttgtttaataaa 105203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 156 - 364
Target Start/End: Complemental strand, 68080 - 67872
Alignment:
Q  156 tgggtctttctattggtggtgatccgaagaggttagccttttgggaacctgtgttgaagactgtaaagtctagattatcggggtggcaaagtcgctttct 255  Q
    |||||||||||||||| ||||||||    ||| |||| |||||||| ||||| |||   | | ||||||||||| | |||| |||| ||||||| |||||    
T  68080 tgggtctttctattgggggtgatcctcgtaggctagcgttttgggaccctgttttgggtattataaagtctagactgtcggcgtggaaaagtcgttttct 67981  T
Q  256 ctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtc 355  Q
     |||||||||||||| | |  |||||  || |  |||||||| ||||||| ||||||||   |||||||||||||||||| || |||||||||||||  |    
T  67980 ttcttttgggggtcgctagactcttcgaaaatacgtcttgacatcattgcatgtctatgatttttccttcttcaaagctctgtaaggtataatctcttcc 67881  T
Q  356 attgaatct 364  Q
    |||||||||    
T  67880 attgaatct 67872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 270 - 376
Target Start/End: Complemental strand, 28660 - 28554
Alignment:
Q  270 ggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttt 369  Q
    |||| |||||||| |||||||||||||||||  | ||||||||||| |||||||||||||| ||||||||||||||||| |||  | |||| ||||||||    
T  28660 ggttagttcttctaaagtctgtcttgacctctctacctgtctatgctctttccttcttcaaggctccgtcaggtataatttcttccgttgactctatttt 28561  T
Q  370 taataaa 376  Q
    || ||||    
T  28560 tactaaa 28554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 273 - 350
Target Start/End: Complemental strand, 8415 - 8338
Alignment:
Q  273 tggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatct 350  Q
    |||||||| | ||||||||| |||||||  ||||||||||||| |||||||||||||||||||| |||||||||||||    
T  8415 tggttcttttaaagtctgtcctgacctctctgcctgtctatgcgctttccttcttcaaagctccatcaggtataatct 8338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 273 - 350
Target Start/End: Complemental strand, 13349 - 13272
Alignment:
Q  273 tggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatct 350  Q
    |||||||| | |||| |||| | |||||  ||||||||||||| |||||||||||||||||||| |||||||||||||    
T  13349 tggttcttttaaagtttgtccttacctctctgcctgtctatgcgctttccttcttcaaagctccatcaggtataatct 13272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 305 - 376
Target Start/End: Complemental strand, 4103 - 4032
Alignment:
Q  305 cctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaa 376  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||  |||||||||| | |||||||||    
T  4103 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctcttccattgaatctttgtttaataaa 4032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 45; Significance: 2e-16; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 444 - 504
Target Start/End: Original strand, 327563 - 327623
Alignment:
Q  444 gaaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgttagg 504  Q
    |||||||||||||||| ||||| ||||||||| ||| ||||||||||||||||||||||||    
T  327563 gaaaggagtatggaggtttgggggtgagacagttgaaggagtttaatagtgctttgttagg 327623  T

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Target: scaffold0002; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 444 - 504
Target Start/End: Original strand, 312109 - 312169
Alignment:
Q  444 gaaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgttagg 504  Q
    |||||||||| ||||| ||||| ||||||||| ||| ||||||||||||||||||||||||    
T  312109 gaaaggagtacggaggtttgggggtgagacagttgaaggagtttaatagtgctttgttagg 312169  T

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Target: scaffold0002; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 346
Target Start/End: Original strand, 311908 - 312003
Alignment:
Q  251 tttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtata 346  Q
    ||||| || ||||| || |||||||| ||| | || ||||||||||| ||  ||||||||||||||||||| |||||||  || || |||||||||    
T  311908 tttctttcctttggtggacggttggtacttttaaaatctgtcttgacttctctgcctgtctatgccctttctttcttcagtgccccatcaggtata 312003  T

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Target: scaffold1350 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 124 - 504
Target Start/End: Complemental strand, 576 - 196
Alignment:
Q  124 ttgcaaagttggtaaagttccgtttctgtatctgggtctttctattggtggtgatccgaagaggttagccttttgggaacctgtgttgaagactgtaaag 223  Q
    ||||||||| ||||||||||||||||| ||| |||||||| | ||||| || |||||     |||||   |||||||| |||||  | ||   | | ||     
T  576 ttgcaaagtgggtaaagttccgtttctctatttgggtcttccgattggaggcgatccacgtcggttattattttgggagcctgttgttaatcgtattaaa 477  T
Q  224 tctagattatcggggtggcaaagtcgctttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttcct 323  Q
    |||||||| || || ||||| ||||| || ||||| ||||| |||||  || |||||||||| || ||| | ||  |  | ||||||||||| |||||||    
T  476 tctagattttctggttggcatagtcggttcctctcctttggtggtcgcctgattcttctcaaatccgtcctaactgcgcttcctgtctatgctctttcct 377  T
Q  324 tcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggggagggagtgaggataacaggaaaatttcctgggtcgc 423  Q
    | ||||||||||||||| |||||||||||   ||||||||| | || ||||||       |||| || |||||||| || || |||||||| ||| | |     
T  376 ttttcaaagctccgtcaagtataatctcttcaattgaatctttgttaaataaatttttttgggggggtagtgaggaaaaaagaaaaatttcttggattgg 277  T
Q  424 ttggaactctgtttgtttacgaaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgttagg 504  Q
    |||||| ||| | |||||  | | |||||||||||||||||| || ||   | |||| |||||||| | ||||||||||||    
T  276 ttggaattctttgtgtttgaggagggagtatggagggttgggtgttaggaggttgagagagtttaacattgctttgttagg 196  T

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Target: scaffold0418 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 287 - 508
Target Start/End: Complemental strand, 8473 - 8252
Alignment:
Q  287 tctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaannnnnnnggg 386  Q
    ||||||||||| ||  | ||||||||||||||||| |||||||||||||| ||||||||||| |||  | |||||||| | |||||| |        |||    
T  8473 tctgtcttgacttctctacctgtctatgccctttctttcttcaaagctccatcaggtataatttcttcccttgaatctttatttaatcattttttttggg 8374  T
Q  387 gaggga-gtgaggataacaggaaaatttcctgggtcgcttggaactctgtttgtttacgaaaggagtatggagggttgggagtgagacagctgagggagt 485  Q
     ||||| |||||||| | || |||||| | ||| | |  |||||   ||||||||    ||||||| ||||||| ||||| ||||||||| ||| ||| |    
T  8373 -agggatgtgaggatcatagaaaaattacttggataggctggaaaattgtttgttccacaaaggagaatggaggtttgggggtgagacagttgaaggaat 8275  T
Q  486 ttaatagtgctttgttaggtaaa 508  Q
    |||||||||||||||||||||||    
T  8274 ttaatagtgctttgttaggtaaa 8252  T

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Target: scaffold0131 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 3)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 384 - 504
Target Start/End: Original strand, 3924 - 4044
Alignment:
Q  384 ggggagggagtgaggataacaggaaaatttcctgggtcgcttggaactctgtttgtttacgaaaggagtatggagggttgggagtgagacagctgaggga 483  Q
    |||| |||||||||||| | |||||||||  |||| | |  |||||  || |||||| |  ||||||||||||||| ||||| ||||||||| ||| |||    
T  3924 ggggggggagtgaggatcataggaaaattagctggataggatggaaaactatttgttcaaaaaaggagtatggaggtttgggggtgagacagttgaagga 4023  T
Q  484 gtttaatagtgctttgttagg 504  Q
    ||||||||||||| |||||||    
T  4024 gtttaatagtgctctgttagg 4044  T

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Target: scaffold0131; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 346
Target Start/End: Original strand, 3819 - 3878
Alignment:
Q  287 tctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtata 346  Q
    ||||||||||| ||  ||||||||||||||||||| |||||||||||||| |||||||||    
T  3819 tctgtcttgacttctctgcctgtctatgccctttctttcttcaaagctccatcaggtata 3878  T

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Target: scaffold0131; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 3564 - 3616
Alignment:
Q  32 atgtctggtttgcgagtgaattttcataagagtatgttggttggaattaatat 84  Q
    |||||||| |||  ||||||||||||||||||| ||||||| || ||||||||    
T  3564 atgtctgggttgaaagtgaattttcataagagtttgttggtggggattaatat 3616  T

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Target: scaffold0029 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 444 - 504
Target Start/End: Original strand, 134282 - 134342
Alignment:
Q  444 gaaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgttagg 504  Q
    |||||||||| ||||| ||||| ||||||||| ||| ||||||||||||||||||||||||    
T  134282 gaaaggagtacggaggtttgggggtgagacagttgaaggagtttaatagtgctttgttagg 134342  T

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Target: scaffold0029; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 346
Target Start/End: Original strand, 134080 - 134175
Alignment:
Q  251 tttctctcttttgggggtcggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtata 346  Q
    ||||| || ||||| || |||||||| ||| | || ||||||||||| ||  ||||||||||||||||||| |||||||  || || |||||||||    
T  134080 tttctttcctttggtggacggttggtacttttaaaatctgtcttgacttctctgcctgtctatgccctttctttcttcagtgccccatcaggtata 134175  T

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Target: scaffold0007 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 294 - 352
Target Start/End: Complemental strand, 182977 - 182919
Alignment:
Q  294 tgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctct 352  Q
    |||||||  ||||||||||||| |||||||||||||||||||| | |||||||||||||    
T  182977 tgacctctctgcctgtctatgcactttccttcttcaaagctccattaggtataatctct 182919  T

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Target: scaffold0061 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 371
Target Start/End: Complemental strand, 55551 - 55450
Alignment:
Q  270 ggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttt 369  Q
    |||| |||||||| |||||| ||||||||||  | ||||||||||| |||||||||||||| ||| | | ||||||||| |||  | |||| ||||||||    
T  55551 ggttagttcttctaaagtctatcttgacctctctacctgtctatgctctttccttcttcaaggcttcattaggtataatttcttcccttgactctatttt 55452  T
Q  370 ta 371  Q
    ||    
T  55451 ta 55450  T

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Target: scaffold0017 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 371
Target Start/End: Original strand, 143082 - 143183
Alignment:
Q  270 ggttggttcttctcaagtctgtcttgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttt 369  Q
    |||| |||||||| |||||| ||||||||||  | ||||||||||| |||||||||||||| ||| | | ||||||||| |||  | |||| ||||||||    
T  143082 ggttagttcttctaaagtctatcttgacctctctacctgtctatgctctttccttcttcaaggcttcattaggtataatttcttcccttgactctatttt 143181  T
Q  370 ta 371  Q
    ||    
T  143182 ta 143183  T

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Target: scaffold0112 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 305 - 364
Target Start/End: Original strand, 14950 - 15009
Alignment:
Q  305 cctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatct 364  Q
    ||||||||||| |||||||||||||||| |||  ||||||||||||||  ||||||||||    
T  14950 cctgtctatgctctttccttcttcaaagatccaccaggtataatctcttccattgaatct 15009  T

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Target: scaffold0094 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 351
Target Start/End: Complemental strand, 26153 - 26105
Alignment:
Q  303 tgcctgtctatgccctttccttcttcaaagctccgtcaggtataatctc 351  Q
    ||||||| ||||||||||| |||||||| |||||||||||||| |||||    
T  26153 tgcctgtttatgccctttctttcttcaaggctccgtcaggtatcatctc 26105  T

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Target: scaffold1809 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 352
Target Start/End: Original strand, 1093 - 1136
Alignment:
Q  309 tctatgccctttccttcttcaaagctccgtcaggtataatctct 352  Q
    ||||||| |||||||||||||| ||||| |||||||||||||||    
T  1093 tctatgcactttccttcttcaaggctccatcaggtataatctct 1136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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