View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7364_low_3 (Length: 351)

Name: NF7364_low_3
Description: NF7364
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7364_low_3
NF7364_low_3
[»] chr4 (16 HSPs)
chr4 (7-337)||(25494262-25494584)
chr4 (50-129)||(1821072-1821150)
chr4 (50-125)||(47943965-47944039)
chr4 (52-129)||(17330961-17331037)
chr4 (52-129)||(49263613-49263689)
chr4 (50-125)||(45666848-45666922)
chr4 (50-129)||(54982157-54982235)
chr4 (55-129)||(6949563-6949636)
chr4 (50-129)||(9088746-9088824)
chr4 (50-129)||(19443047-19443125)
chr4 (50-128)||(34031469-34031547)
chr4 (78-129)||(37209545-37209596)
chr4 (78-129)||(49299321-49299372)
chr4 (50-129)||(9808160-9808236)
chr4 (54-124)||(46196526-46196595)
chr4 (78-128)||(46430403-46430453)
[»] chr5 (11 HSPs)
chr5 (50-129)||(1584242-1584320)
chr5 (50-129)||(39585353-39585431)
chr5 (54-129)||(6428631-6428705)
chr5 (50-129)||(17201878-17201956)
chr5 (50-130)||(19804302-19804381)
chr5 (50-106)||(25612737-25612792)
chr5 (54-128)||(1584059-1584132)
chr5 (50-128)||(32474714-32474791)
chr5 (50-129)||(28620589-28620665)
chr5 (50-129)||(8544129-8544207)
chr5 (50-124)||(19133037-19133110)
[»] chr7 (10 HSPs)
chr7 (50-129)||(16197393-16197471)
chr7 (50-129)||(2271339-2271417)
chr7 (78-130)||(28226885-28226937)
chr7 (50-125)||(12394794-12394868)
chr7 (52-129)||(37124723-37124799)
chr7 (50-129)||(1752052-1752130)
chr7 (50-129)||(4567925-4568003)
chr7 (78-129)||(10534424-10534475)
chr7 (14-52)||(2273346-2273384)
chr7 (50-122)||(39618233-39618304)
[»] chr3 (12 HSPs)
chr3 (50-129)||(16236991-16237069)
chr3 (50-129)||(2599600-2599678)
chr3 (52-129)||(27817983-27818059)
chr3 (50-130)||(45647135-45647214)
chr3 (50-129)||(37030369-37030448)
chr3 (51-129)||(34824239-34824316)
chr3 (50-129)||(34669220-34669299)
chr3 (50-129)||(296992-297070)
chr3 (90-129)||(27264379-27264418)
chr3 (50-124)||(5494162-5494235)
chr3 (55-128)||(2094315-2094389)
chr3 (50-130)||(9589302-9589381)
[»] chr1 (7 HSPs)
chr1 (50-129)||(6295192-6295270)
chr1 (50-129)||(41117530-41117608)
chr1 (50-129)||(36319441-36319519)
chr1 (50-130)||(11817493-11817572)
chr1 (50-129)||(1394898-1394976)
chr1 (65-129)||(13254147-13254210)
chr1 (89-129)||(19270257-19270297)
[»] chr2 (6 HSPs)
chr2 (50-129)||(29408330-29408408)
chr2 (50-130)||(1398022-1398101)
chr2 (52-129)||(16806035-16806111)
chr2 (52-129)||(16845316-16845392)
chr2 (50-129)||(45271840-45271916)
chr2 (50-119)||(3309418-3309486)
[»] chr6 (3 HSPs)
chr6 (50-129)||(8049902-8049980)
chr6 (50-132)||(14093208-14093288)
chr6 (97-129)||(9353714-9353746)
[»] chr8 (5 HSPs)
chr8 (50-129)||(32234231-32234309)
chr8 (50-129)||(38402079-38402155)
chr8 (78-129)||(1256236-1256287)
chr8 (54-129)||(5871387-5871461)
chr8 (85-129)||(27232250-27232294)


Alignment Details
Target: chr4 (Bit Score: 268; Significance: 1e-149; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 7 - 337
Target Start/End: Original strand, 25494262 - 25494584
Alignment:
Q  7 tgagaagaagataacattaaatttattgaaaatataaagtgtgtgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaa 106  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  25494262 tgagatgaagataacattaaatttattgaaaatataaagtgtgtgagggtataataggaagacaatgtgcaaaaa-tgcacatcgctaatttggtgttaa 25494360  T
Q  107 ttttccaaaaagacacttaaaaattagattgtactatttgcacaagttcaaattccaaccggttctgtttcaactaatcatgaattcaagttttgttttc 206  Q
    ||||| ||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25494361 ttttctaaaaagac--ttaaaaattagattgtactatttgtacaagttcaaattccaaccggttctgtttcaactaatcatgaattcaagttttggtttc 25494458  T
Q  207 tttctattaaaaaatgttacattacattatgacatgtcaacttaattctttctcaagcaacataggcattaaccctttaatatggatcaactctaaacgg 306  Q
    |||||||| |||||||||||     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25494459 tttctattgaaaaatgttac-----attatgacatgtcaacttaattctttctcaagcaacataggcattaaccctttaatatggatcaactctaaacgg 25494553  T
Q  307 caaggattttgatttgaatggaaggtgtgtg 337  Q
    |||||||||||||||||||||||||||||||    
T  25494554 caaggattttgatttgaatggaaggtgtgtg 25494584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 129
Target Start/End: Complemental strand, 1821150 - 1821072
Alignment:
Q  50 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 129  Q
    |||||||||||||| |||| |||||||||||| | |||||||||| |||||||||||||||  |||||||||||||||||    
T  1821150 tgagggtataataggaagaaaatgtgcaaaaa-tacacatcgctattttggtgttaattttttaaaaagacacttaaaaa 1821072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 47944039 - 47943965
Alignment:
Q  50 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacactta 125  Q
    |||||||||||||| |||| |||||||||||| | |||||||||| |||||||||||||||  |||||||||||||    
T  47944039 tgagggtataataggaagaaaatgtgcaaaaa-tacacatcgctattttggtgttaattttttaaaaagacactta 47943965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 52 - 129
Target Start/End: Original strand, 17330961 - 17331037
Alignment:
Q  52 agggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 129  Q
    |||||||||||| |||| |||||||||||| | ||||| |||| |||||||||||||||| |||||||||||| ||||    
T  17330961 agggtataataggaagaaaatgtgcaaaaa-tacacattgctattttggtgttaattttctaaaaagacacttcaaaa 17331037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 52 - 129
Target Start/End: Original strand, 49263613 - 49263689
Alignment:
Q  52 agggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 129  Q
    ||||| |||||| |||| |||||||||||| | ||| |||||| |||||||||||||||| |||||||||||||||||    
T  49263613 agggtctaataggaagaaaatgtgcaaaaa-tacacttcgctattttggtgttaattttctaaaaagacacttaaaaa 49263689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 45666848 - 45666922
Alignment:
Q  50 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacactta 125  Q
    |||||||||||||| |||| |||||||||||| | |||||||||| |||||||| ||||||  |||||||||||||    
T  45666848 tgagggtataataggaagaaaatgtgcaaaaa-tacacatcgctattttggtgtgaattttttaaaaagacactta 45666922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 129
Target Start/End: Complemental strand, 54982235 - 54982157
Alignment:
Q  50 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 129  Q
    |||||| |||||||||||| || ||||||||| | |||||| ||| |||| ||||||||||| |||||||||||||||||    
T  54982235 tgagggcataatagaaagaaaacgtgcaaaaa-tacacatcactattttgatgttaattttctaaaaagacacttaaaaa 54982157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 6949563 - 6949636
Alignment:
Q  55 gtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 129  Q
    ||||||||| |||| ||||| |||||| | ||||||| ||||||||||||||||||| ||||| |||||||||||    
T  6949563 gtataataggaagaaaatgtacaaaaa-tacacatcgttaatttggtgttaattttctaaaaatacacttaaaaa 6949636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 129
Target Start/End: Complemental strand, 9088824 - 9088746
Alignment:
Q  50 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 129  Q
    |||||||||||||| |||| ||||||| || ||| |||||||||| ||| |||||||| ||| ||||||| |||||||||    
T  9088824 tgagggtataataggaagaaaatgtgc-aagaatacacatcgctattttagtgttaatgttctaaaaagatacttaaaaa 9088746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 129
Target Start/End: Complemental strand, 19443125 - 19443047
Alignment:
Q  50 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 129  Q
    |||||||||||||| |||| |||||||||||| |  |||||| ||  ||||| ||||||||| |||||||||||||||||    
T  19443125 tgagggtataataggaagaaaatgtgcaaaaa-tatacatcgttatcttggtattaattttctaaaaagacacttaaaaa 19443047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 128
Target Start/End: Complemental strand, 34031547 - 34031469
Alignment:
Q  50 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttc-caaaaagacacttaaaa 128  Q
    |||||||||||||| |||| |||||||| ||||| |||||| ||| |||||| |||||||||  ||||||||||||||||    
T  34031547 tgagggtataataggaagaaaatgtgca-aaaatacacatcactattttggtcttaattttctaaaaaagacacttaaaa 34031469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 129
Target Start/End: Complemental strand, 37209596 - 37209545
Alignment:
Q  78 aaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 129  Q
    |||||| |||||||||| ||||||| |||||||| |||||||||||||||||    
T  37209596 aaaaatacacatcgctattttggtggtaattttctaaaaagacacttaaaaa 37209545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 129
Target Start/End: Complemental strand, 49299372 - 49299321
Alignment:
Q  78 aaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 129  Q
    |||||| |||||||||| ||| |||||||||||| |||||||||||||||||    
T  49299372 aaaaatacacatcgctatttttgtgttaattttctaaaaagacacttaaaaa 49299321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 129
Target Start/End: Original strand, 9808160 - 9808236
Alignment:
Q  50 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 129  Q
    ||||| |||||||| |||| ||||||  |||||| |||||||||| ||||||||||||||| | |||||||| |||||||    
T  9808160 tgaggatataataggaagaaaatgtg--aaaaatacacatcgctattttggtgttaatttt-ctaaaagacatttaaaaa 9808236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 46196526 - 46196595
Alignment:
Q  54 ggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacactt 124  Q
    |||||||||| |||| ||| |||||||| | ||| |||||| |||||||||||||||  ||||||||||||    
T  46196526 ggtataataggaagaaaatatgcaaaaa-tacacctcgctattttggtgttaattttataaaaagacactt 46196595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 46430453 - 46430403
Alignment:
Q  78 aaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaa 128  Q
    |||||| ||||||| || |||||||||||||||  ||||||||||||||||    
T  46430453 aaaaatacacatcgttattttggtgttaattttttaaaaagacacttaaaa 46430403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 4e-23; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 50 - 129
Target Start/End: Original strand, 1584242 - 1584320
Alignment:
Q  50 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 129  Q
    ||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||  |||||||||||||||||    
T  1584242 tgagggtataatagaaagaaaatgtgcaaaaa-tacacatcgctaatttggtgttaattttttaaaaagacacttaaaaa 1584320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 129
Target Start/End: Complemental strand, 39585431 - 39585353
Alignment:
Q  50 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 129  Q
    |||||||||||||| |||| |||||||||||| | ||| |||||| |||||||||||||||| |||||||||||||||||    
T  39585431 tgagggtataataggaagaaaatgtgcaaaaa-tacacgtcgctattttggtgttaattttctaaaaagacacttaaaaa 39585353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 54 - 129
Target Start/End: Original strand, 6428631 - 6428705
Alignment:
Q  54 ggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 129  Q
    ||||||||||||||| |||||||||||| | |||||| ||| ||||||||||||||||  ||||||||||||||||    
T  6428631 ggtataatagaaagaaaatgtgcaaaaa-tacacatcactattttggtgttaattttcttaaaagacacttaaaaa 6428705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 50 - 129
Target Start/End: Complemental strand, 17201956 - 17201878
Alignment:
Q  50 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 129  Q
    |||||||||||||| |||| |||||||||||| | |||||||||| |||  ||||||||||| |||||||||||||||||    
T  17201956 tgagggtataataggaagaaaatgtgcaaaaa-tacacatcgctatttttatgttaattttctaaaaagacacttaaaaa 17201878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 130
Target Start/End: Original strand, 19804302 - 19804381
Alignment:
Q  50 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaat 130  Q
    |||||||| ||||| |||| ||||| |||||| | ||||| |||||||| |||||||||||| ||||||||||||||||||    
T  19804302 tgagggtagaataggaagaaaatgtacaaaaa-tacacattgctaatttagtgttaattttctaaaaagacacttaaaaat 19804381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 50 - 106
Target Start/End: Complemental strand, 25612792 - 25612737
Alignment:
Q  50 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaa 106  Q
    |||||||||||||| |||| |||||||||||| | ||||||||||||||||||||||    
T  25612792 tgagggtataataggaagaaaatgtgcaaaaa-tacacatcgctaatttggtgttaa 25612737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 128
Target Start/End: Original strand, 1584059 - 1584132
Alignment:
Q  54 ggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaa 128  Q
    |||||||||| |||| |||||||||||| | ||||||||||||||| |||| |||||  ||||||| ||||||||    
T  1584059 ggtataataggaagaaaatgtgcaaaaa-tacacatcgctaatttgatgtttattttttaaaaagatacttaaaa 1584132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 128
Target Start/End: Original strand, 32474714 - 32474791
Alignment:
Q  50 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaa 128  Q
    ||||||||||||||||||| ||||||| |||||| || ||||||| |||| || ||||||||  |||||| ||||||||    
T  32474714 tgagggtataatagaaagaaaatgtgc-aaaaatacaaatcgctattttgatggtaattttcttaaaagatacttaaaa 32474791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 129
Target Start/End: Original strand, 28620589 - 28620665
Alignment:
Q  50 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 129  Q
    |||||||||||||| |||| || ||||||||| | ||||||| || ||  |||||||||||| |||||||||||||||||    
T  28620589 tgagggtataataggaagaaaaggtgcaaaaa-tacacatcgttattt--gtgttaattttctaaaaagacacttaaaaa 28620665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 50 - 129
Target Start/End: Complemental strand, 8544207 - 8544129
Alignment:
Q  50 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 129  Q
    |||||||||||||  |||| |||||||||||| | ||||| | ||||||||||||||||||   ||||| ||||||||||    
T  8544207 tgagggtataatatgaagaaaatgtgcaaaaa-tacacattgttaatttggtgttaattttttgaaaaggcacttaaaaa 8544129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 124
Target Start/End: Complemental strand, 19133110 - 19133037
Alignment:
Q  50 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacactt 124  Q
    ||||||||||||||||||| ||||||  ||| || ||| |||||||||| ||| |||| |||||||| |||||||    
T  19133110 tgagggtataatagaaagaaaatgtg-taaatatacacttcgctaatttcgtgctaatattccaaaatgacactt 19133037  T

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Target: chr7 (Bit Score: 52; Significance: 9e-21; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 50 - 129
Target Start/End: Original strand, 16197393 - 16197471
Alignment:
Q  50 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 129  Q
    ||||||||||||||||||| |||||||||||| | |||||| ||| |||||||||||||||| |||||||||||||||||    
T  16197393 tgagggtataatagaaagaaaatgtgcaaaaa-tacacatcactattttggtgttaattttctaaaaagacacttaaaaa 16197471  T

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Target: chr7; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 50 - 129
Target Start/End: Complemental strand, 2271417 - 2271339
Alignment:
Q  50 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 129  Q
    ||||| |||||||| |||| |||||||||||| | |||||||||| |||||||||||||| | |||||||||||||||||    
T  2271417 tgaggatataataggaagaaaatgtgcaaaaa-tacacatcgctattttggtgttaatttcctaaaaagacacttaaaaa 2271339  T

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Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 28226885 - 28226937
Alignment:
Q  78 aaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaat 130  Q
    |||||| ||||||||||||||||||||||| |||||||| |||||||||||||    
T  28226885 aaaaatacacatcgctaatttggtgttaatattccaaaacgacacttaaaaat 28226937  T

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Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 12394794 - 12394868
Alignment:
Q  50 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacactta 125  Q
    |||| ||||||||| |||| ||||||||||| |||||||||  || ||||||||| |||||| |||||||||||||    
T  12394794 tgagagtataataggaagaaaatgtgcaaaa-atgcacatcattattttggtgttcattttctaaaaagacactta 12394868  T

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Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 52 - 129
Target Start/End: Original strand, 37124723 - 37124799
Alignment:
Q  52 agggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 129  Q
    |||||||||||| |||| ||||||||||||   ||||| |||| |||| || |||||||| |||||||||||||||||    
T  37124723 agggtataataggaagaaaatgtgcaaaaaca-cacattgctattttgatgctaattttctaaaaagacacttaaaaa 37124799  T

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Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 50 - 129
Target Start/End: Complemental strand, 1752130 - 1752052
Alignment:
Q  50 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 129  Q
    ||||||||||||||||||| |||||| ||||||| ||| ||  ||| ||||||||| | ||||||||  |||||||||||    
T  1752130 tgagggtataatagaaagaaaatgtg-aaaaaatacacttccttaaattggtgttattattccaaaacaacacttaaaaa 1752052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 50 - 129
Target Start/End: Original strand, 4567925 - 4568003
Alignment:
Q  50 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 129  Q
    ||||||||||||||||||| || ||| ||||| | |||  ||||| |||| ||||||||||| ||||||||| |||||||    
T  4567925 tgagggtataatagaaagataacgtgtaaaaa-tacactgcgctattttgatgttaattttctaaaaagacatttaaaaa 4568003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 78 - 129
Target Start/End: Complemental strand, 10534475 - 10534424
Alignment:
Q  78 aaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 129  Q
    |||||| ||||||| || |||||||||||||||| ||||||||| |||||||    
T  10534475 aaaaatacacatcgttattttggtgttaattttctaaaaagacatttaaaaa 10534424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 2273384 - 2273346
Alignment:
Q  14 aagataacattaaatttattgaaaatataaagtgtgtga 52  Q
    ||||||||||||||||||||||||| | |||||||||||    
T  2273384 aagataacattaaatttattgaaaagagaaagtgtgtga 2273346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 122
Target Start/End: Original strand, 39618233 - 39618304
Alignment:
Q  50 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacac 122  Q
    |||||||||||||| |||| ||||||| |||||| ||||||  || |||  ||||||||||| ||||||||||    
T  39618233 tgagggtataataggaagaaaatgtgc-aaaaatacacatctatatttttatgttaattttctaaaaagacac 39618304  T

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Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 129
Target Start/End: Complemental strand, 16237069 - 16236991
Alignment:
Q  50 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 129  Q
    |||||||||||||| |||| |||||| ||||||| |||||||||| ||| |||||||||||| |||||||||||||||||    
T  16237069 tgagggtataataggaagaaaatgtg-aaaaaatacacatcgctatttttgtgttaattttctaaaaagacacttaaaaa 16236991  T

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Target: chr3; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 50 - 129
Target Start/End: Original strand, 2599600 - 2599678
Alignment:
Q  50 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 129  Q
    |||||||||||||| || | |||||||||||| | |||||||||| ||| |||||||||||| |||||||||||||||||    
T  2599600 tgagggtataataggaataaaatgtgcaaaaa-tacacatcgctattttagtgttaattttctaaaaagacacttaaaaa 2599678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 129
Target Start/End: Original strand, 27817983 - 27818059
Alignment:
Q  52 agggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 129  Q
    |||||||||||| || | ||||||||||| |||||||||| || ||| |||||||||||| ||||| |||||||||||    
T  27817983 agggtataataggaataaaatgtgcaaaa-atgcacatcgttatttttgtgttaattttctaaaaaaacacttaaaaa 27818059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 50 - 130
Target Start/End: Original strand, 45647135 - 45647214
Alignment:
Q  50 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaat 130  Q
    |||||||||||||| |||| ||||||||| || | |||||||||| |||  ||||||||||| ||||| ||||||||||||    
T  45647135 tgagggtataataggaagaaaatgtgcaagaa-tacacatcgctatttttatgttaattttctaaaaaaacacttaaaaat 45647214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 129
Target Start/End: Complemental strand, 37030448 - 37030369
Alignment:
Q  50 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 129  Q
    |||||||||| ||| |||| |||||||||||||| ||| |||  | ||| |||||||||||| ||||| |||||||||||    
T  37030448 tgagggtatactaggaagaaaatgtgcaaaaaatacacttcgtgatttttgtgttaattttctaaaaaaacacttaaaaa 37030369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 129
Target Start/End: Original strand, 34824239 - 34824316
Alignment:
Q  51 gagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 129  Q
    |||||||| ||||||||| |||||||||||| | ||| || |||||||||||| ||| ||| |||| ||||||||||||    
T  34824239 gagggtatgatagaaagaaaatgtgcaaaaa-tacacttcactaatttggtgtgaatattctaaaacgacacttaaaaa 34824316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 129
Target Start/End: Original strand, 34669220 - 34669299
Alignment:
Q  50 tgagggtataatagaaagacaa-tgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 129  Q
    |||| |||||||||||| | || |||||||||| | |||||||||| |||  ||||||||||||||||| |||||||||||    
T  34669220 tgagagtataatagaaaaaaaaatgtgcaaaaa-tacacatcgctattttaatgttaattttccaaaaaaacacttaaaaa 34669299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 50 - 129
Target Start/End: Original strand, 296992 - 297070
Alignment:
Q  50 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 129  Q
    |||||||||| ||| |||| ||||| |||||| | ||| |||||| |||||||||||| ||| |||| ||||||||||||    
T  296992 tgagggtatagtaggaagaaaatgtacaaaaa-tacacttcgctattttggtgttaatattctaaaacgacacttaaaaa 297070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 90 - 129
Target Start/End: Original strand, 27264379 - 27264418
Alignment:
Q  90 cgctaatttggtgttaattttccaaaaagacacttaaaaa 129  Q
    |||||||||||||||||||||  |||||||||||||||||    
T  27264379 cgctaatttggtgttaattttttaaaaagacacttaaaaa 27264418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 124
Target Start/End: Original strand, 5494162 - 5494235
Alignment:
Q  50 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacactt 124  Q
    ||||| |||||||| |||| |||||||||||| | |||||| ||| ||| || ||||||||| ||||||||||||    
T  5494162 tgaggatataataggaagaaaatgtgcaaaaa-tacacatcactatttttgtattaattttctaaaaagacactt 5494235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 128
Target Start/End: Original strand, 2094315 - 2094389
Alignment:
Q  55 gtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaa--ttttccaaaaagacacttaaaa 128  Q
    ||||||||| |||| |||||||||||| | |||||| ||| |||||||||||  ||||  ||||||||||||||||    
T  2094315 gtataataggaagaaaatgtgcaaaaa-tacacatcactattttggtgttaatttttttaaaaaagacacttaaaa 2094389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 130
Target Start/End: Original strand, 9589302 - 9589381
Alignment:
Q  50 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaat 130  Q
    |||||||| ||||| |||| || ||||||||| | ||| | |||| |||||||||||| ||| |||| |||||||||||||    
T  9589302 tgagggtacaataggaagaaaaagtgcaaaaa-tacactttgctattttggtgttaatattctaaaatgacacttaaaaat 9589381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 129
Target Start/End: Complemental strand, 6295270 - 6295192
Alignment:
Q  50 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 129  Q
    ||||||||||||||||||| |||||||||||| | |||||||||| ||| |||||||||||| ||||||||| |||||||    
T  6295270 tgagggtataatagaaagaaaatgtgcaaaaa-tacacatcgctattttagtgttaattttctaaaaagacatttaaaaa 6295192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 50 - 129
Target Start/End: Original strand, 41117530 - 41117608
Alignment:
Q  50 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 129  Q
    ||||||||||||||||| | ||  |||||||| | |||||||||| |||||||||||||||| |||||||||||||||||    
T  41117530 tgagggtataatagaaaaaaaaaatgcaaaaa-tacacatcgctagtttggtgttaattttctaaaaagacacttaaaaa 41117608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 129
Target Start/End: Complemental strand, 36319519 - 36319441
Alignment:
Q  50 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 129  Q
    |||| ||||||||| |||| |||||||||||| | |||||||||| ||| |||||||||||| ||||||| |||||||||    
T  36319519 tgagagtataataggaagaaaatgtgcaaaaa-tacacatcgctatttttgtgttaattttctaaaaagatacttaaaaa 36319441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 130
Target Start/End: Complemental strand, 11817572 - 11817493
Alignment:
Q  50 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaat 130  Q
    |||||||||||||| || | ||| |||||||| | | ||| ||||||||||||||||||||  ||||||| ||||||||||    
T  11817572 tgagggtataataggaaaaaaatctgcaaaaa-tacgcattgctaatttggtgttaattttttaaaaagaaacttaaaaat 11817493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 50 - 129
Target Start/End: Original strand, 1394898 - 1394976
Alignment:
Q  50 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 129  Q
    ||||||||| ||||||||| |||||| ||||||| ||| || |||||||| ||| ||| ||| |||| ||||||||||||    
T  1394898 tgagggtatgatagaaagaaaatgtg-aaaaaatacacttcactaatttgatgtgaatattctaaaacgacacttaaaaa 1394976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 13254210 - 13254147
Alignment:
Q  65 aagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 129  Q
    |||| |||||||||||| | |||||||||| |||| ||||||||||| ||||| || ||||||||    
T  13254210 aagaaaatgtgcaaaaa-tacacatcgctattttgatgttaattttctaaaaaaacgcttaaaaa 13254147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 129
Target Start/End: Original strand, 19270257 - 19270297
Alignment:
Q  89 tcgctaatttggtgttaattttccaaaaagacacttaaaaa 129  Q
    ||||||||||||||||||| || ||||| ||||||||||||    
T  19270257 tcgctaatttggtgttaatatttcaaaacgacacttaaaaa 19270297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 5e-16; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 50 - 129
Target Start/End: Complemental strand, 29408408 - 29408330
Alignment:
Q  50 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 129  Q
    ||||||||||||||||||| |||||||||||| | ||||||| || |||||||||||||||| ||||| ||| |||||||    
T  29408408 tgagggtataatagaaagaaaatgtgcaaaaa-tacacatcgttattttggtgttaattttctaaaaaaacatttaaaaa 29408330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 130
Target Start/End: Original strand, 1398022 - 1398101
Alignment:
Q  50 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaat 130  Q
    |||||||||||| | |||| |||||||||||| | |||||||||| |||||||||||||||| ||||| ||||||| ||||    
T  1398022 tgagggtataattggaagaaaatgtgcaaaaa-tacacatcgctattttggtgttaattttctaaaaaaacacttacaaat 1398101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 129
Target Start/End: Complemental strand, 16806111 - 16806035
Alignment:
Q  52 agggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 129  Q
    |||||||||||| |||| || ||||||||| | |||||| ||| |||||| ||||||||| |||||||||||||||||    
T  16806111 agggtataataggaagaaaacgtgcaaaaa-tacacatcactattttggttttaattttctaaaaagacacttaaaaa 16806035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 129
Target Start/End: Complemental strand, 16845392 - 16845316
Alignment:
Q  52 agggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 129  Q
    |||||||||||| |||| || ||||||||| | |||||| ||| |||||| ||||||||| |||||||||||||||||    
T  16845392 agggtataataggaagaaaacgtgcaaaaa-tacacatcactattttggttttaattttctaaaaagacacttaaaaa 16845316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 129
Target Start/End: Complemental strand, 45271916 - 45271840
Alignment:
Q  50 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 129  Q
    |||||||||||||| |||| ||||| |||||||| |||||| ||||||| ||||| |||||| ||||  |||||||||||    
T  45271916 tgagggtataataggaagaaaatgtacaaaaaatacacatcactaatttagtgtt-attttctaaaa--acacttaaaaa 45271840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 3309486 - 3309418
Alignment:
Q  50 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaaga 119  Q
    |||||||||||||| |||| |||||||| ||||| ||||||| |  |||| ||||||||||| |||||||    
T  3309486 tgagggtataataggaagaaaatgtgca-aaaatacacatcgttgttttgatgttaattttctaaaaaga 3309418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 129
Target Start/End: Original strand, 8049902 - 8049980
Alignment:
Q  50 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 129  Q
    |||||||||||||| |||| ||||||||||||   |||||||||| |||||||||||||||  |||||||||| ||||||    
T  8049902 tgagggtataataggaagaaaatgtgcaaaaaca-cacatcgctattttggtgttaattttttaaaaagacacataaaaa 8049980  T

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Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 50 - 132
Target Start/End: Complemental strand, 14093288 - 14093208
Alignment:
Q  50 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaatta 132  Q
    |||||||||||||| |||| |||||||| ||||| ||||| |||||||||||||||| ||| | |||||| ||||||||||||    
T  14093288 tgagggtataataggaagaaaatgtgca-aaaatacacattgctaatttggtgttaacttt-ctaaaagatacttaaaaatta 14093208  T

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Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 9353714 - 9353746
Alignment:
Q  97 ttggtgttaattttccaaaaagacacttaaaaa 129  Q
    ||||||||||||||| |||||||||||||||||    
T  9353714 ttggtgttaattttctaaaaagacacttaaaaa 9353746  T

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Target: chr8 (Bit Score: 36; Significance: 0.00000000003; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 129
Target Start/End: Original strand, 32234231 - 32234309
Alignment:
Q  50 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 129  Q
    |||||||||||||| |||| ||||| |||||| | |||||||||| |||| ||| ||||||| ||||| |||||||||||    
T  32234231 tgagggtataataggaagaaaatgtacaaaaa-tacacatcgctattttgatgtaaattttctaaaaaaacacttaaaaa 32234309  T

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Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 129
Target Start/End: Original strand, 38402079 - 38402155
Alignment:
Q  50 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 129  Q
    ||||||||||||||||||| ||||||| |||||| ||||| |||| |||| |||||| |||| |||||||||||||||||    
T  38402079 tgagggtataatagaaaga-aatgtgc-aaaaatacacattgctattttgatgttaa-tttctaaaaagacacttaaaaa 38402155  T

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Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 78 - 129
Target Start/End: Complemental strand, 1256287 - 1256236
Alignment:
Q  78 aaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 129  Q
    |||||| ||||  ||||||| ||||||||||||| |||||||||||||||||    
T  1256287 aaaaatacacaatgctaattcggtgttaattttctaaaaagacacttaaaaa 1256236  T

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Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 54 - 129
Target Start/End: Original strand, 5871387 - 5871461
Alignment:
Q  54 ggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 129  Q
    |||||||||| |||| |||||| ||||| |  |||||||||||||| | ||||||||  |||||||||||||||||    
T  5871387 ggtataataggaagaaaatgtgtaaaaa-tatacatcgctaatttgatattaattttttaaaaagacacttaaaaa 5871461  T

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Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 129
Target Start/End: Original strand, 27232250 - 27232294
Alignment:
Q  85 cacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 129  Q
    ||||||||||||||||  ||||||||| ||||| |||||||||||    
T  27232250 cacatcgctaatttgggtttaattttctaaaaaaacacttaaaaa 27232294  T

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