View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7365_low_3 (Length: 465)
Name: NF7365_low_3
Description: NF7365
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7365_low_3 |
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Alignment Details
Target: chr8 (Bit Score: 395; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 395; E-Value: 0
Query Start/End: Original strand, 17 - 454
Target Start/End: Complemental strand, 33189984 - 33189538
Alignment:
| Q |
17 |
ataaccacaccatgccttatagtgcattcgtccatgcaaacggatcgtgcattttagcatttttctaaccagcactagttaaattatcatcgatatattt |
116 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33189984 |
ataaccacaccatgccttatagtgcattcgtccatgcaaacggatcgtgcattttagcatttttctaaccagcactagttaaattatcatcgatatattt |
33189885 |
T |
|
| Q |
117 |
accaaatgaaactacttgtatacagaatagatgtaatcttaatagagacgtaaacaatagtaacatgcaaaagttgagtctagcggagaggtcagacttc |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33189884 |
accaaatgaaactacttgtatacagaatagatgtaatcttaatagagacgtaaataatagtaacatgcaaaagttgagtctagcggagaggtcagacttc |
33189785 |
T |
|
| Q |
217 |
cacaacgtagcaaattgaagttcaaattccgactgagatatccatattttgtactatctgacatgtctcgtacaagattacttcttgtgggaaaaatgta |
316 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33189784 |
cacgacgtagcaaattgaagttcaaattccgactgagatatccatattttgtcctatctgacatgtctcgtacaagattacttcttgtgggaaaaatgta |
33189685 |
T |
|
| Q |
317 |
gccaatagtgaattcggtaaattatgctagcaagtattttttatttattttaatgctagcaagtaattataatttttcaaatagcaacat---------t |
407 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
33189684 |
gccaatagtaaattcggtaaattatgctagcaagtattttttatttattttaatgctagcaagtaattataatttttcaaatagcaacattaattaacct |
33189585 |
T |
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| Q |
408 |
aatgtagccacataaagcaaaatatgcatgtgtatcccattagtatt |
454 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
33189584 |
aatgtagccacataaagcaaaatatgtatgtgtatcccattagtatt |
33189538 |
T |
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