View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7365_low_4 (Length: 398)
Name: NF7365_low_4
Description: NF7365
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7365_low_4 |
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Alignment Details
Target: chr2 (Bit Score: 369; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 9 - 393
Target Start/End: Complemental strand, 8566075 - 8565691
Alignment:
| Q |
9 |
gaaaaatatagtgatggttccatgtatgtcaataaagctccaaccaggaattttcctcaaaccaagagatcgcatgcgagtccatacctcaccgactcct |
108 |
Q |
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| T |
8566075 |
gaaaaatgtagtgatggttccatgtatgtcaataaagctccaaccaggaattttcctcaaaccaagagatctcatgtgagtccatacctcacccactcct |
8565976 |
T |
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| Q |
109 |
tcccacttgtttattgaagcataacagtgagctagttgtacataatttccagcactcataggccttagcttgataatatcattggcaattatatcaccaa |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8565975 |
tcccacttgtttattgaagcataacagtgagctagttgtacataatttccagcactcataggccttagcttgataatatcattggcaattatatcaccaa |
8565876 |
T |
|
| Q |
209 |
gttctttattaccattcgctcgacatgcatcaaggattatgcctaacacatcaagcacaggatctgagaacattctcttgtacaagttatacgcctcctc |
308 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8565875 |
gttctttattaccattcgctcgacatgcatcaaggattatgcctaacacatcaagcacaggatctgagaacattctcttgtacaagttatacgcctcctc |
8565776 |
T |
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| Q |
309 |
taccttcccggcacgacataggagatccaccatacaagcatggtgttcgagatttggcacaaacccgaaatctcgagtcatagat |
393 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8565775 |
taccttcccggcacgacataggagatccaccatacaagcatggtgttcgagatttggcacaaacccgaaatctcgagtcatagat |
8565691 |
T |
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