View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7369_high_12 (Length: 240)
Name: NF7369_high_12
Description: NF7369
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7369_high_12 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 18 - 240
Target Start/End: Original strand, 2378049 - 2378277
Alignment:
| Q |
18 |
tgaacaaagtttcatgttttgttcactataaataaaaccataaagcagttaaattttatgctctttataagtaataatcatgt------ggtgggtatag |
111 |
Q |
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| T |
2378049 |
tgaacaaagtttcatgttttgttcactataaataaaaccataaagcagttaaattttatgctctttataagtaataatcatgtttgcatggtgggtatag |
2378148 |
T |
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| Q |
112 |
tatgtcatttaatcattttcgaaaaatgtttgctctgaaggttcattttgcagaagggttttttagtcatatttttgcatggtcaacttgttgactgtgt |
211 |
Q |
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| T |
2378149 |
tatgtcattgaatcattttcgaaaaatgtttgctctgaaggttcattttgcagaagggttttttagtcatatttttgcatggtcaacttgttgactgtgt |
2378248 |
T |
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| Q |
212 |
tattttttattctgctgtattcatgtacc |
240 |
Q |
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| T |
2378249 |
tattttttattctgctgtattcatgtacc |
2378277 |
T |
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