View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7369_low_29 (Length: 239)
Name: NF7369_low_29
Description: NF7369
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7369_low_29 |
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Alignment Details
Target: chr7 (Bit Score: 171; Significance: 6e-92; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 50 - 224
Target Start/End: Original strand, 42640062 - 42640236
Alignment:
| Q |
50 |
tgtgatattgattattttcttggttgcagttaaggcaagaattcagtttatgccgagtgtacaagaagtcaaagtgcttaagggcatttgatagacgacc |
149 |
Q |
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| T |
42640062 |
tgtgatattgattattttcttggttgcagttaaggcaagaattcagtttatgccgagtgtacaagaaatcaaagtgcttaagggcatttgatagacgacc |
42640161 |
T |
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| Q |
150 |
accaccaaggagggttacaacccatgttcaaaatgctcaagagcaccagaaagattcaagttgcgaacatgatgt |
224 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42640162 |
accaccaaggagggttacaacccatgttcaaaatgctcaagagcaccagaaagattcaagttgcgaacatgatgt |
42640236 |
T |
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