View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7369_low_5 (Length: 548)
Name: NF7369_low_5
Description: NF7369
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7369_low_5 |
 |  |
|
Alignment Details
Target: chr4 (Bit Score: 468; Significance: 0; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 468; E-Value: 0
Query Start/End: Original strand, 16 - 531
Target Start/End: Original strand, 7616034 - 7616549
Alignment:
| Q |
16 |
atgaatcaacaattggaggtacataggtaggttctaggatgtcagcaacacaagtattctcagctgcagcatggataaagagtacacctgcattgttgca |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7616034 |
atgaatcaacaattggaggtacataggtaggttctaggatgtcagcaacacaagtattctcagctgcagcatggataaagagtacacctgcattgttgca |
7616133 |
T |
 |
| Q |
116 |
tataacagaacacgagacggtgttgtcattgtgctccgttattttgagacggccggaaagaggttggaaaaaggcaagggcagaggacaaagagtgtctc |
215 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7616134 |
tataacagaacacgagacggtgttgtcattgtgctccgttattttgagacggccggaaagaggttggaaaaaggcaagggcagaggacaaagagtgtctc |
7616233 |
T |
 |
| Q |
216 |
agccgttggatttggttagcttcaactggatggtgataaagaagaccctttgggttggttgtaccaagtagaaaccggagatcccatggagtcaaatcaa |
315 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7616234 |
agccgttggatttggttagcttcaactggatggtgataaagaagaccctttgggttggttgtaccaagtagaaaccggagatcccatggagtcaaatcaa |
7616333 |
T |
 |
| Q |
316 |
tagtttgattacttgattttggtgccttaattgtatcagtagagagaactcgcacggttcccannnnnnnnattgagcaatgtttttattctatactttg |
415 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
7616334 |
tagtttgattacttgattttggtgccttaattgtatcagtagagagaactcgcacggttcccattttttttattgagcaatgtttttattctatactttg |
7616433 |
T |
 |
| Q |
416 |
aggttgatttgctgacttggatggacatatatatgtagttggttgtgctcttatatnnnnnnnnctcgattgatcacgaaaacatgatatttggttgtgc |
515 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
7616434 |
aggttgatttgctgacttggatggacatatatatgtagttggttgtgctcttatataaaaaaaactcgattgatcacgaaaacatgatatttggttgtgc |
7616533 |
T |
 |
| Q |
516 |
tcttatacaacaaatt |
531 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
7616534 |
tcttatacaacaaatt |
7616549 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 19 - 367
Target Start/End: Original strand, 7637872 - 7638220
Alignment:
| Q |
19 |
aatcaacaattggaggtacataggtaggttctaggatgtcagcaacacaagtattctcagctgcagcatggataaagagtacacctgcattgttgcatat |
118 |
Q |
| |
|
||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||| |
|
|
| T |
7637872 |
aatcaacaattggaggtacgtaggtgggttctaggatgtctgcaacacaagtattctctgctgcggcatggacaaagagtacacctgcattgttgcatat |
7637971 |
T |
 |
| Q |
119 |
aacagaacacgagacggtgttgtcattgtgctccgttattttgagacggccggaaagaggttggaaaaaggcaagggcagaggacaaagagtgtctcagc |
218 |
Q |
| |
|
||| |||||||| || |||||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||| |
|
|
| T |
7637972 |
aacggaacacgaaacagtgttgtctctgtgttccgttattttgagacggccggcaagaggttggaaaaaggcaagggctgaggacagagagtgtctcagc |
7638071 |
T |
 |
| Q |
219 |
cgttggatttggttagcttcaactggatggtgataaagaagaccctttgggttggttgtaccaagtagaaaccggagatcccatggagtcaaatcaatag |
318 |
Q |
| |
|
|||||||||||||||||| |||| |||||| |||||||||| |||||| ||||||| | |||||||| |||||||||||||||||||||||| || | |
|
|
| T |
7638072 |
cgttggatttggttagctacaaccggatggcgataaagaaggccctttttgttggttaaaacaagtagataccggagatcccatggagtcaaatggattg |
7638171 |
T |
 |
| Q |
319 |
tttgattacttgattttggtgccttaattgtatcagtagagagaactcg |
367 |
Q |
| |
|
|||| | |||||||||||||||||| |||||||| || ||||||||||| |
|
|
| T |
7638172 |
tttgctcacttgattttggtgccttgattgtatcggtggagagaactcg |
7638220 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 17 - 367
Target Start/End: Original strand, 7629424 - 7629774
Alignment:
| Q |
17 |
tgaatcaacaattggaggtacataggtaggttctaggatgtcagcaacacaagtattctcagctgcagcatggataaagagtacacctgcattgttgcat |
116 |
Q |
| |
|
|||||| |||||| ||||||| ||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
7629424 |
tgaatcgacaatttgaggtacgtagaccggttctaggatgtcagcaacacaagtattctcggctgcagcgtggataaagagtacacctgcattgttgcat |
7629523 |
T |
 |
| Q |
117 |
ataacagaacacgagacggtgttgtcattgtgctccgttattttgagacggccggaaagaggttggaaaaaggcaagggcagaggacaaagagtgtctca |
216 |
Q |
| |
|
||||||||||||||||| || ||||| ||||| |||||||||| |||||||| | ||||||||| ||||||| |||||||||||| | ||||||||||| |
|
|
| T |
7629524 |
ataacagaacacgagacagtattgtccttgtgttccgttatttcaagacggccagcaagaggttgaaaaaaggaaagggcagaggatagagagtgtctca |
7629623 |
T |
 |
| Q |
217 |
gccgttggatttggttagcttcaactggatggtgataaagaagaccctttgggttggttgtaccaagtagaaaccggagatcccatggagtcaaatcaat |
316 |
Q |
| |
|
|||||||||||||| | ||| |||| |||||| |||||||||| |||||| |||||||| | |||||||||| |||||||||||||||||||||| || |
|
|
| T |
7629624 |
gccgttggatttgggttgctacaaccggatggcgataaagaaggccctttttgttggttgaaacaagtagaaagcggagatcccatggagtcaaatggat |
7629723 |
T |
 |
| Q |
317 |
agtttgattacttgattttggtgccttaattgtatcagtagagagaactcg |
367 |
Q |
| |
|
||||| | |||||||||||||||||| |||||||| | ||||||||||| |
|
|
| T |
7629724 |
tgtttggtcacttgattttggtgccttgattgtatcggaggagagaactcg |
7629774 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 16 - 372
Target Start/End: Original strand, 7607038 - 7607394
Alignment:
| Q |
16 |
atgaatcaacaattggaggtacataggtaggttctaggatgtcagcaacacaagtattctcagctgcagcatggataaagagtacacctgcattgttgca |
115 |
Q |
| |
|
||||||| |||||| ||||||| ||| ||||| |||||||||||||||| | ||||||| ||| |||| ||||||||||||||||||||||| ||||| |
|
|
| T |
7607038 |
atgaatcgacaattagaggtacgtagaccggttccaggatgtcagcaacacgaatattctctgctacagcgtggataaagagtacacctgcattattgca |
7607137 |
T |
 |
| Q |
116 |
tataacagaacacgagacggtgttgtcattgtgctccgttattttgagacggccggaaagaggttggaaaaaggcaagggcagaggacaaagagtgtctc |
215 |
Q |
| |
|
|||||| ||||| ||||| ||||||| | || |||||||||| || ||||||| ||||||||||||||||| |||||||||||| | |||||||||| |
|
|
| T |
7607138 |
tataacggaacatgagacaatgttgtctctatgttccgttatttcaaggcggccggcaagaggttggaaaaaggaaagggcagaggatagagagtgtctc |
7607237 |
T |
 |
| Q |
216 |
agccgttggatttggttagcttcaactggatggtgataaagaagaccctttgggttggttgtaccaagtagaaaccggagatcccatggagtcaaatcaa |
315 |
Q |
| |
|
| ||||||||||||| | || | || ||||| ||||||||||| |||||| |||||||| | |||||||||| |||||||||||||||||||||| | |
|
|
| T |
7607238 |
aaccgttggatttgggttgcaaccaccggatgatgataaagaaggccctttttgttggttgaaacaagtagaaaacggagatcccatggagtcaaatgga |
7607337 |
T |
 |
| Q |
316 |
tagtttgattacttgattttggtgccttaattgtatcagtagagagaactcgcacgg |
372 |
Q |
| |
|
| ||||||| |||||||||||||||||| |||||||| | ||||||||||| |||| |
|
|
| T |
7607338 |
ttgtttgatcacttgattttggtgccttgattgtatcggaggagagaactcggacgg |
7607394 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 36 - 351
Target Start/End: Complemental strand, 7655437 - 7655122
Alignment:
| Q |
36 |
acataggtaggttctaggatgtcagcaacacaagtattctcagctgcagcatggataaagagtacacctgcattgttgcatataacagaacacgagacgg |
135 |
Q |
| |
|
||||| || |||| ||||||||||||||||||||||| || ||||||||||| |||||| |||||||||||| |||||| | |||||||||||||| |
|
|
| T |
7655437 |
acatatgtgggttttaggatgtcagcaacacaagtatccttggctgcagcatgtataaagtttacacctgcattattgcatgttacagaacacgagacaa |
7655338 |
T |
 |
| Q |
136 |
tgttgtcattgtgctccgttattttgagacggccggaaagaggttggaaaaaggcaagggcagaggacaaagagtgtctcagccgttggatttggttagc |
235 |
Q |
| |
|
|| |||| | ||| || || ||||||||||| |||| ||||||||||||||||| |||||| ||||| ||||||||| |||||||||| ||||||| | |
|
|
| T |
7655337 |
tgctgtcttcgtgttctgtaattttgagacgaccggcaagaggttggaaaaaggaaagggctgaggataaagagtgtgtcagccgttgaatttggtctga |
7655238 |
T |
 |
| Q |
236 |
ttcaactggatggtgataaagaagaccctttgggttggttgtaccaagtagaaaccggagatcccatggagtcaaatcaatagtttgattacttgatttt |
335 |
Q |
| |
|
| | | ||||||||||||||||| || ||| ||||||| | ||||||||| |||||||||||||||| ||||| || | |||||||||||||| |
|
|
| T |
7655237 |
tgctaaaggatggtgataaagaaggccttttttattggttggataaagtagaaattggagatcccatggagttaaatcgattttatgattacttgatttc |
7655138 |
T |
 |
| Q |
336 |
ggtgccttaattgtat |
351 |
Q |
| |
|
|||||| ||||||| |
|
|
| T |
7655137 |
aatgccttgattgtat |
7655122 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 229; Significance: 1e-126; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 16 - 449
Target Start/End: Complemental strand, 8935418 - 8934986
Alignment:
| Q |
16 |
atgaatcaacaattggaggtacataggtaggttctaggatgtcagcaacacaagtattctcagctgcagcatggataaagagtacacctgcattgttgca |
115 |
Q |
| |
|
|||||||||||||||| ||||| ||||| |||||||| ||||||||||||||||||||||| | | ||||||| |||||||||||||||||||||||| |
|
|
| T |
8935418 |
atgaatcaacaattggtggtacgtaggtgggttctagaatgtcagcaacacaagtattctctgatctggcatggacaaagagtacacctgcattgttgca |
8935319 |
T |
 |
| Q |
116 |
tataacagaacacgagacggtgttgtcattgtgctccgttattttgagacggccggaaagaggttggaaaaaggcaagggcagaggacaaagagtgtctc |
215 |
Q |
| |
|
|||||| || |||||||| || ||||| | || |||||||||||||||||||||| ||||||||||||||||||||||| || || | |||||||||| |
|
|
| T |
8935318 |
tataacggagcacgagacagttttgtcttggtattccgttattttgagacggccggcaagaggttggaaaaaggcaagggttgaagatagagagtgtctc |
8935219 |
T |
 |
| Q |
216 |
agccgttggatttggttagcttcaactggatggtgataaagaagaccctttgggttggttgtaccaagtagaaaccggagatcccatggagtcaaatcaa |
315 |
Q |
| |
|
||||||||||||||||||| | |||| ||||||||||||| ||| |||||| |||||||| | |||||| |||||||||||||||||||||||| | |
|
|
| T |
8935218 |
agccgttggatttggttagatacaaccggatggtgataaaaaaggccctttttgttggttggaataagtagtgaccggagatcccatggagtcaaatgga |
8935119 |
T |
 |
| Q |
316 |
tagtttgattacttgattttggtgccttaattgtatcagtagagagaactcgcacggttcccannnnnnnnattgagcaatgtttttattctatactttg |
415 |
Q |
| |
|
| ||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
8935118 |
tcgtttgatcacttgattttgttgccttaattgtatcagtagagagaactcgtacggttccca-ttcttttattgagcaatgtttttattctatactttg |
8935020 |
T |
 |
| Q |
416 |
aggttgatttgctgacttggatggacatatatat |
449 |
Q |
| |
|
||||||||||||| |||| ||||||||||||||| |
|
|
| T |
8935019 |
aggttgatttgctcacttagatggacatatatat |
8934986 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 16 - 276
Target Start/End: Complemental strand, 8934477 - 8934217
Alignment:
| Q |
16 |
atgaatcaacaattggaggtacataggtaggttctaggatgtcagcaacacaagtattctcagctgcagcatggataaagagtacacctgcattgttgca |
115 |
Q |
| |
|
|||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||| | | ||||||| |||||||||| ||||||||||||| |
|
|
| T |
8934477 |
atgaatcaacaattggaggtacgtaggtgggttctagaatgtcagcaacacaagtattctctgatctggcatggacaaagagtacatctgcattgttgca |
8934378 |
T |
 |
| Q |
116 |
tataacagaacacgagacggtgttgtcattgtgctccgttattttgagacggccggaaagaggttggaaaaaggcaagggcagaggacaaagagtgtctc |
215 |
Q |
| |
|
|||||| || |||||||| || ||||| | || ||||||||||||||||| ||| ||||||||||||||||||||||| || || | ||||||||| |
|
|
| T |
8934377 |
tataacggagcacgagacagttttgtcttggtattccgttattttgagacgaccgacaagaggttggaaaaaggcaagggttgaagatagagagtgtctt |
8934278 |
T |
 |
| Q |
216 |
agccgttggatttggttagcttcaactggatggtgataaagaagaccctttgggttggttg |
276 |
Q |
| |
|
||| ||||||||||||||| | |||| ||||||| ||||||||| |||||| |||||||| |
|
|
| T |
8934277 |
agctgttggatttggttagatacaaccggatggtaataaagaaggccctttttgttggttg |
8934217 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 291 - 471
Target Start/End: Complemental strand, 8932953 - 8932774
Alignment:
| Q |
291 |
cggagatcccatggagtcaaatcaatagtttgattacttgattttggtgccttaattgtatcagtagagagaactcgcacggttcccannnnnnnnattg |
390 |
Q |
| |
|
||||||||| |||||||||||| || ||||||| ||||||||||| |||||||||||||||| ||||||||||||| |||||||||| ||| |
|
|
| T |
8932953 |
cggagatccaatggagtcaaatggattgtttgatcacttgattttgttgccttaattgtatcaatagagagaactcgtacggttcccattctttt-atta |
8932855 |
T |
 |
| Q |
391 |
agcaatgtttttattctatactttgaggttgatttgctgacttggatggacatatatatgtagttggttgtgctcttatat |
471 |
Q |
| |
|
|| ||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||| |
|
|
| T |
8932854 |
agaaatgtttttattctatactttcaggttgatttgctcacttggatgaacatatatatgtagttggttgtgcgcttatat |
8932774 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 8930022 - 8929905
Alignment:
| Q |
16 |
atgaatcaacaattggaggtacataggtaggttctaggatgtcagcaacacaagtattctcagctgcagcatggataaagagtacacctgcattgttgca |
115 |
Q |
| |
|
|||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||| | | ||||| | |||||||||| ||||||||||||| |
|
|
| T |
8930022 |
atgaatcaacaattggaggtacgtaggtgggttctagaatgtcagcaacacaagtattctctgatctggcatgaacaaagagtacaactgcattgttgca |
8929923 |
T |
 |
| Q |
116 |
tataacagaacacgagac |
133 |
Q |
| |
|
|||||| || |||||||| |
|
|
| T |
8929922 |
tataacggagcacgagac |
8929905 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 80; Significance: 3e-37; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 54 - 361
Target Start/End: Complemental strand, 40146668 - 40146361
Alignment:
| Q |
54 |
atgtcagcaacacaagtattctcagctgcagcatggataaagagtacacctgcattgttgcatataacagaacacgagacggtgttgtcattgtgctccg |
153 |
Q |
| |
|
|||||| | |||||||| ||||| || |||||||||| |||||| | ||||||||||||||| | || ||||| || ||||||||||| ||||| || | |
|
|
| T |
40146668 |
atgtcacctacacaagtgttctctgccgcagcatggacaaagagcgcgcctgcattgttgcatgtgacggaacatgaaacggtgttgtccttgtgatctg |
40146569 |
T |
 |
| Q |
154 |
ttattttgagacggccggaaagaggttggaaaaaggcaagggcagaggacaaagagtgtctcagccgttggatttggttagcttcaactggatggtgata |
253 |
Q |
| |
|
|||||| |||||||| | ||| ||| ||||||||||||||| ||| || | ||||||| |||| |||| |||||||| | | | ||||||||||| |
|
|
| T |
40146568 |
ttatttctagacggcctgcaagtggtgggaaaaaggcaagggtagaagatagagagtgtttcagatgttgaatttggtttggcactagaggatggtgata |
40146469 |
T |
 |
| Q |
254 |
aagaagaccctttgggttggttgtaccaagtagaaaccggagatcccatggagtcaaatcaatagtttgattacttgattttggtgccttaattgtatca |
353 |
Q |
| |
|
||||||||||||| | ||| || | ||||| ||||||||||||||||||| |||||||| |||||| |||||| ||||||| ||| ||||||| |
|
|
| T |
40146468 |
aagaagaccctttttggtgggtgcaattagtaggtaccggagatcccatggagttaaatcaattttttgatcacttgaatttggtgacttgattgtatgg |
40146369 |
T |
 |
| Q |
354 |
gtagagag |
361 |
Q |
| |
|
|||||||| |
|
|
| T |
40146368 |
gtagagag |
40146361 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 100 - 365
Target Start/End: Complemental strand, 40409613 - 40409350
Alignment:
| Q |
100 |
cacctgcattgttgcatataacagaacacgagacggtgttgtcattgtgctccgttattttgagacggccggaaagaggttggaaaaaggcaagggcaga |
199 |
Q |
| |
|
||||||||||||||||| | ||| ||||||| | ||||||||| || || || ||| | | |||||||| | ||| ||| ||||||||||||||||||| |
|
|
| T |
40409613 |
cacctgcattgttgcatgtgacacaacacgaaatggtgttgtctttatggtctgttctctctagacggcctgcaagtggtgggaaaaaggcaagggcaga |
40409514 |
T |
 |
| Q |
200 |
ggacaaagagtgtctcagccgttggatttggttagcttcaactggatggtgataaagaagaccctttgggttggttgtaccaagtagaaaccggagatcc |
299 |
Q |
| |
|
||| | ||||||| |||| |||| |||||||| | | | |||||||||| |||||||| ||||| || || | | ||||| ||| |||||||| |
|
|
| T |
40409513 |
ggatagagagtgtttcagatgttgaatttggtttggcactagaggatggtgatgaagaagactttttgg--tgcgtgcaactagtaggaactggagatcc |
40409416 |
T |
 |
| Q |
300 |
catggagtcaaatcaatagtttgattacttgattttggtgccttaattgtatcagtagagagaact |
365 |
Q |
| |
|
||||||||||||| | || ||||||| |||| ||||||||||| |||||||| |||||||||||| |
|
|
| T |
40409415 |
catggagtcaaatgattattttgatttgttgaatttggtgcctttattgtatcggtagagagaact |
40409350 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 54 - 367
Target Start/End: Original strand, 8103316 - 8103629
Alignment:
| Q |
54 |
atgtcagcaacacaagtattctcagctgcagcatggataaagagtacacctgcattgttgcatataacagaacacgagacggtgttgtcattgtgctccg |
153 |
Q |
| |
|
|||||| | |||||||| ||||||| || |||||||| |||||||||||| ||||||||||| | || |||||||| | ||||||||| | || || | |
|
|
| T |
8103316 |
atgtcacctacacaagtgttctcagttgtagcatggacaaagagtacaccggcattgttgcacgtgaccgaacacgacatggtgttgtcttcatggtctg |
8103415 |
T |
 |
| Q |
154 |
ttattttgagacggccggaaagaggttggaaaaaggcaagggcagaggacaaagagtgtctcagccgttggatttggttagcttcaactggatggtgata |
253 |
Q |
| |
|
|||||| |||||||| | ||| || ||||||| ||||| | ||| || | ||| ||| | ||| || | |||||||| | || | |||||||| || |
|
|
| T |
8103416 |
ttatttctagacggcctgcaagtagtgggaaaaaagcaagagtagatgatagagattgttttagctgtggaatttggtttgactctagaggatggtggta |
8103515 |
T |
 |
| Q |
254 |
aagaagaccctt-tgggttggttgtaccaagtagaaaccggagatcccatggagtcaaatcaatagtttgattacttgattttggtgccttaattgtatc |
352 |
Q |
| |
|
||| |||||||| ||||| |||| | ||||||||| | ||||||||||||||| | |||||| ||| || | |||| ||||||||||| |||||||| |
|
|
| T |
8103516 |
aaggagacccttatgggtgggtt-caacaagtagaaccttgagatcccatggagtaagatcaattttttcatcagttgaatttggtgcctttattgtatc |
8103614 |
T |
 |
| Q |
353 |
agtagagagaactcg |
367 |
Q |
| |
|
|||||||| ||||| |
|
|
| T |
8103615 |
tgtagagaggactcg |
8103629 |
T |
 |
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Target: chr6 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 80 - 232
Target Start/End: Original strand, 6501373 - 6501525
Alignment:
| Q |
80 |
tgcagcatggataaagagtacacctgcattgttgcatataacagaacacgagacggtgttgtcattgtgctccgttattttgagacggccggaaagaggt |
179 |
Q |
| |
|
|||||| |||| ||||||||||||||||||||||||| | | ||||| || || ||||||| | || ||||| |||||||||||||| | ||| ||| |
|
|
| T |
6501373 |
tgcagcgtggacaaagagtacacctgcattgttgcatgtgatggaacatgaaacattgttgtcttcgttttccgtcattttgagacggcccgcaagtggt |
6501472 |
T |
 |
| Q |
180 |
tggaaaaaggcaagggcagaggacaaagagtgtctcagccgttggatttggtt |
232 |
Q |
| |
|
||||||||||||||| ||||||| ||||||||||| || |||| |||||||| |
|
|
| T |
6501473 |
tggaaaaaggcaaggacagaggataaagagtgtctaaggcgttctatttggtt |
6501525 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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