View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7370_high_2 (Length: 382)
Name: NF7370_high_2
Description: NF7370
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7370_high_2 |
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Alignment Details
Target: chr8 (Bit Score: 330; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 330; E-Value: 0
Query Start/End: Original strand, 11 - 365
Target Start/End: Complemental strand, 37054520 - 37054170
Alignment:
| Q |
11 |
cagagaggctaaaacagatttcacctatgaaggctttaccattccaaagggatggaaggtaccttcaaattgaattcatcataatatattaagatatata |
110 |
Q |
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| T |
37054520 |
cagagaggctaaaacagatttcacctatgaaggctttaccattccaaagggatggaaggtaccttcaaattgaattcatcataatatattaagatat--- |
37054424 |
T |
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| Q |
111 |
ttgcctatattcattaaaaagtagtaacatgtaacttaaattgttactaaatcatttgtgaacttgtactttaacagatattctgggcatttattggaac |
210 |
Q |
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| T |
37054423 |
-tgcctatattcattaaaaagtagtaacatgtaacttaaattgttactaaatcatttgtgaacttgtactttaacagatattctgggcatttattggaac |
37054325 |
T |
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| Q |
211 |
aaataagaatcccatgtactttgataaacctgaaagttttgatccatctaggtttgaagggaataatgttcctgcaccatacacttatataccctttgga |
310 |
Q |
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|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
37054324 |
aaataagaatcccaagtactttgataaacctgaaagttttgatccatctaggtttgaagggaataatgttcttgcaccatacacttatataccctttgga |
37054225 |
T |
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| Q |
311 |
tcaggaccaagatcttgtcctggaaaggattacacacggcttgcgattctcactt |
365 |
Q |
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| T |
37054224 |
tcaggaccaagatcttgtcctggaaaggattacacacggcttgcgattctcactt |
37054170 |
T |
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