View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7370_low_4 (Length: 404)
Name: NF7370_low_4
Description: NF7370
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7370_low_4 |
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Alignment Details
Target: chr6 (Bit Score: 358; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 358; E-Value: 0
Query Start/End: Original strand, 1 - 390
Target Start/End: Original strand, 9924776 - 9925164
Alignment:
| Q |
1 |
ataatttcccctcttgatatactaaaacaaaaatgcattcaagacacataagcaaattgaaaatctatatcaaataatgaaaatagattcaatgaggcga |
100 |
Q |
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| T |
9924776 |
ataatttcccctcttgatagactaaaacaaaaatgcattcaagatacataagcaaatttaaaatctatatcaaataatgaaa-tagattcaatgaggcaa |
9924874 |
T |
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| Q |
101 |
ggagaaagaggataagtactagcataatctaattatatagtaccttggtatagtcatgcccataaatgtgtttgtaactcaaaaatgttagtttcaattg |
200 |
Q |
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| T |
9924875 |
ggagaaagaggataattactagcataatctaattatatagtaccttggtatagtcatgcccataaatgtgtttgtaactcaaaaatgttagtttcaattg |
9924974 |
T |
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| Q |
201 |
tggaatacttctcttgcttaaaatttctagcacaacagcttcatctatagctcctaaacttccttcaccagtttcatatagcctccttgcatcacactta |
300 |
Q |
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| T |
9924975 |
tggaatacttctcttgcttaaaatttctagcacaacagcttcatctatagctcctaaacttccttcaccagtttcatatagcctccttgcatcacactta |
9925074 |
T |
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| Q |
301 |
gatatatgatggctaatatctgcttggtgagctttatgtgatgctgacaatgccataagaatctgcatattcaaaatcaaaccttatttt |
390 |
Q |
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| T |
9925075 |
gatatatgatggctaatatctgcttggtgagctttatgtgatgctgacaatgccgtaagaatctgcatattcaaaatcaaaccttatttt |
9925164 |
T |
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