View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7374_low_7 (Length: 423)

Name: NF7374_low_7
Description: NF7374
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7374_low_7
NF7374_low_7
[»] chr4 (27 HSPs)
chr4 (19-306)||(4686024-4686298)
chr4 (132-190)||(25414211-25414269)
chr4 (130-199)||(56409963-56410032)
chr4 (370-412)||(4686362-4686404)
chr4 (132-198)||(37980144-37980210)
chr4 (132-198)||(25434655-25434720)
chr4 (137-195)||(38206127-38206185)
chr4 (137-186)||(41621726-41621775)
chr4 (134-198)||(29195108-29195172)
chr4 (138-190)||(42281236-42281288)
chr4 (136-198)||(37455582-37455645)
chr4 (132-198)||(21344830-21344896)
chr4 (137-195)||(47183338-47183396)
chr4 (118-186)||(19660642-19660711)
chr4 (111-198)||(44865347-44865436)
chr4 (118-186)||(45302857-45302926)
chr4 (134-190)||(17701896-17701952)
chr4 (134-198)||(23760785-23760849)
chr4 (132-190)||(5795405-5795464)
chr4 (132-190)||(8325375-8325434)
chr4 (156-198)||(39030134-39030176)
chr4 (133-190)||(4088264-4088321)
chr4 (118-186)||(40058962-40059031)
chr4 (132-188)||(46295120-46295177)
chr4 (134-190)||(32475093-32475149)
chr4 (132-187)||(32992636-32992692)
chr4 (134-186)||(43352451-43352503)
[»] chr8 (7 HSPs)
chr8 (118-188)||(40136945-40137015)
chr8 (132-198)||(6530820-6530886)
chr8 (137-198)||(22268935-22268996)
chr8 (137-196)||(34778750-34778809)
chr8 (136-182)||(26168977-26169023)
chr8 (142-198)||(26688878-26688935)
chr8 (135-190)||(11793520-11793576)
[»] chr5 (13 HSPs)
chr5 (133-198)||(16172981-16173046)
chr5 (137-188)||(14656645-14656696)
chr5 (132-190)||(31669021-31669079)
chr5 (135-198)||(19373252-19373315)
chr5 (136-186)||(15485420-15485470)
chr5 (107-190)||(3315236-3315321)
chr5 (136-186)||(930614-930664)
chr5 (129-173)||(2499300-2499344)
chr5 (137-185)||(11465037-11465085)
chr5 (142-190)||(16247136-16247184)
chr5 (130-186)||(37397731-37397787)
chr5 (130-190)||(37421306-37421366)
chr5 (146-182)||(40330655-40330691)
[»] chr6 (12 HSPs)
chr6 (102-181)||(3433567-3433647)
chr6 (118-198)||(6691532-6691613)
chr6 (142-189)||(6384009-6384056)
chr6 (118-186)||(9208270-9208339)
chr6 (148-196)||(20864218-20864266)
chr6 (130-198)||(28028543-28028611)
chr6 (142-186)||(33499492-33499536)
chr6 (134-188)||(15929889-15929944)
chr6 (132-198)||(3869709-3869775)
chr6 (137-190)||(9876995-9877048)
chr6 (134-190)||(20863396-20863453)
chr6 (157-190)||(24507558-24507591)
[»] chr1 (28 HSPs)
chr1 (130-190)||(37047006-37047066)
chr1 (136-189)||(39964527-39964580)
chr1 (133-190)||(4824992-4825050)
chr1 (132-198)||(15581138-15581204)
chr1 (132-186)||(38939227-38939281)
chr1 (136-190)||(41470611-41470665)
chr1 (120-190)||(44417446-44417516)
chr1 (134-186)||(10059073-10059125)
chr1 (136-190)||(39012312-39012366)
chr1 (133-186)||(39714776-39714829)
chr1 (133-186)||(40802193-40802246)
chr1 (142-190)||(18928353-18928401)
chr1 (130-198)||(24857825-24857893)
chr1 (134-190)||(34228895-34228951)
chr1 (139-190)||(30043600-30043651)
chr1 (132-198)||(31605844-31605911)
chr1 (132-190)||(36428733-36428792)
chr1 (132-198)||(45266847-45266914)
chr1 (113-186)||(1138597-1138671)
chr1 (132-190)||(6127983-6128041)
chr1 (137-190)||(20203886-20203940)
chr1 (136-186)||(32729563-32729613)
chr1 (136-186)||(37351590-37351640)
chr1 (130-187)||(49101763-49101820)
chr1 (137-186)||(52135148-52135197)
chr1 (130-190)||(22585200-22585260)
chr1 (138-198)||(44660635-44660695)
chr1 (131-198)||(52116776-52116844)
[»] chr3 (20 HSPs)
chr3 (132-198)||(43303771-43303837)
chr3 (133-198)||(42799745-42799810)
chr3 (136-187)||(34844395-34844446)
chr3 (136-188)||(26158834-26158886)
chr3 (135-198)||(26871503-26871567)
chr3 (132-196)||(40268504-40268568)
chr3 (135-190)||(44069779-44069835)
chr3 (127-190)||(35623258-35623321)
chr3 (136-186)||(4252525-4252575)
chr3 (133-190)||(10682941-10682998)
chr3 (133-190)||(18316496-18316553)
chr3 (134-190)||(51257602-51257658)
chr3 (137-189)||(53167793-53167845)
chr3 (133-187)||(1712806-1712861)
chr3 (118-172)||(40777052-40777107)
chr3 (118-190)||(11092151-11092224)
chr3 (132-173)||(36660801-36660842)
chr3 (142-187)||(53863874-53863919)
chr3 (131-198)||(14339623-14339691)
chr3 (135-190)||(45449623-45449676)
[»] chr2 (17 HSPs)
chr2 (133-198)||(26482106-26482171)
chr2 (132-186)||(6099515-6099569)
chr2 (130-187)||(12517747-12517805)
chr2 (137-186)||(40591201-40591250)
chr2 (139-190)||(13747637-13747688)
chr2 (132-195)||(18825357-18825420)
chr2 (132-198)||(16525191-16525257)
chr2 (132-189)||(31681071-31681129)
chr2 (130-188)||(43963983-43964041)
chr2 (115-190)||(3697378-3697454)
chr2 (130-190)||(26176320-26176380)
chr2 (131-186)||(35092594-35092650)
chr2 (136-191)||(5394030-5394085)
chr2 (136-186)||(6714410-6714460)
chr2 (136-186)||(8192480-8192530)
chr2 (136-185)||(19054044-19054093)
chr2 (137-190)||(25384557-25384610)
[»] chr7 (18 HSPs)
chr7 (145-190)||(12877174-12877219)
chr7 (132-195)||(5579230-5579294)
chr7 (137-190)||(12424997-12425050)
chr7 (134-190)||(29385741-29385798)
chr7 (130-190)||(25956287-25956347)
chr7 (131-198)||(43590920-43590988)
chr7 (132-176)||(46279049-46279093)
chr7 (141-180)||(13585670-13585709)
chr7 (137-198)||(5273591-5273653)
chr7 (146-188)||(21050151-21050193)
chr7 (118-198)||(48039628-48039710)
chr7 (121-185)||(11700191-11700256)
chr7 (153-198)||(18847440-18847485)
chr7 (136-173)||(22696355-22696392)
chr7 (130-198)||(31835205-31835274)
chr7 (137-186)||(40332121-40332170)
chr7 (142-186)||(28089838-28089882)
chr7 (142-190)||(48125181-48125229)
[»] scaffold0189 (1 HSPs)
scaffold0189 (133-198)||(17721-17786)
[»] scaffold0337 (1 HSPs)
scaffold0337 (157-190)||(1774-1807)
[»] scaffold0236 (1 HSPs)
scaffold0236 (130-198)||(24834-24903)
[»] scaffold0140 (1 HSPs)
scaffold0140 (129-190)||(29505-29566)
[»] scaffold0065 (1 HSPs)
scaffold0065 (157-190)||(12210-12243)
[»] scaffold0012 (1 HSPs)
scaffold0012 (137-190)||(240887-240940)


Alignment Details
Target: chr4 (Bit Score: 214; Significance: 1e-117; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 19 - 306
Target Start/End: Original strand, 4686024 - 4686298
Alignment:
Q  19 cttgtgtcggacactcagacatgtcattggtgcttcatagcctgccactaacaccagcagtaaaaatagaatctacnnnnnnnaagtcaaattagtccgc 118  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||               |||||||||    
T  4686024 cttgtgtcggacactcagacatgtcattggtgcttcatggcctgccactaacaccagcggtaaaaatagaatctactt-------------ttagtccgc 4686110  T
Q  119 cgaaatttgcacagggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacaccaacaggccaggcgaagccaacagaatcta 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4686111 cgaaatttgcacagggagaatcaaacctgagacattgagaggagcacactccaaggtctcaagccaacaccaacaggccaggcgaagccaacagaatcta 4686210  T
Q  219 cttatcttaaatcttaattgaatcttctttacagcagaagcaaagttaagtcactggaaaaatgcattttttgcattgctcagtcttc 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||    
T  4686211 cttatcttaaatcttaattgaatcttctttacagcagaagcaaagttaagtcactggaaaatttcattgtttgcattgctcagtcttc 4686298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 132 - 190
Target Start/End: Original strand, 25414211 - 25414269
Alignment:
Q  132 gggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacacca 190  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  25414211 gggagaatcaaacctgagactttgagaggagcacactccaaggtctcaagccaacacca 25414269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 130 - 199
Target Start/End: Complemental strand, 56410032 - 56409963
Alignment:
Q  130 cagggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacaccaacaggccag 199  Q
    ||||||||||| |||||||||| |||||||||||| ||||||||||| |||||||||| || ||||||||    
T  56410032 cagggagaatcgaacctgagaccttgagaggagcacactccaaggtcccaagccaacagcaccaggccag 56409963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 370 - 412
Target Start/End: Original strand, 4686362 - 4686404
Alignment:
Q  370 ggatcatgctttttaagaaacacaacaacatttatcttcaaaa 412  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  4686362 ggatcatgctttttaagaaacacaacaacatttatcttcaaaa 4686404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 132 - 198
Target Start/End: Original strand, 37980144 - 37980210
Alignment:
Q  132 gggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacaccaacaggcca 198  Q
    ||||||||| |||||||||| |||||||||||| ||||||||||| |||||||||| || |||||||    
T  37980144 gggagaatcgaacctgagaccttgagaggagcacactccaaggtcccaagccaacatcaccaggcca 37980210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 132 - 198
Target Start/End: Original strand, 25434655 - 25434720
Alignment:
Q  132 gggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacaccaacaggcca 198  Q
    |||||||||||||||||||| ||||||| |||| ||||||||||| |||||| |||||| |||||||    
T  25434655 gggagaatcaaacctgagaccttgagagaagcacactccaaggtcccaagcc-acaccaccaggcca 25434720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 137 - 195
Target Start/End: Original strand, 38206127 - 38206185
Alignment:
Q  137 aatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacaccaacagg 195  Q
    ||||||||||||||| |||||||||||| ||||||||||| ||||||| ||||| ||||    
T  38206127 aatcaaacctgagaccttgagaggagcacactccaaggtcccaagccagcaccaccagg 38206185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 41621726 - 41621775
Alignment:
Q  137 aatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaac 186  Q
    |||||||| |||||| ||||||||||||||||||||| ||||||||||||    
T  41621726 aatcaaacatgagaccttgagaggagcaaactccaagatctcaagccaac 41621775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 134 - 198
Target Start/End: Complemental strand, 29195172 - 29195108
Alignment:
Q  134 gagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacaccaacaggcca 198  Q
    ||||||| ||| || ||| |||||||||||| ||||||||||| ||||||||||||| |||||||    
T  29195172 gagaatcgaacttgcgaccttgagaggagcacactccaaggtcccaagccaacaccaccaggcca 29195108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 42281236 - 42281288
Alignment:
Q  138 atcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacacca 190  Q
    |||||||||||||| |||||||||||| ||| ||||||| |||||||||||||    
T  42281236 atcaaacctgagaccttgagaggagcacactacaaggtcccaagccaacacca 42281288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 198
Target Start/End: Complemental strand, 37455645 - 37455582
Alignment:
Q  136 gaatcaaacctgagacattgagaggagcaaactcc-aaggtctcaagccaacaccaacaggcca 198  Q
    ||||| |||||||||| |||||||||||| ||||| |||||| ||||||||||||| |||||||    
T  37455645 gaatcgaacctgagaccttgagaggagcatactccaaaggtcccaagccaacaccaccaggcca 37455582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 198
Target Start/End: Complemental strand, 21344896 - 21344830
Alignment:
Q  132 gggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacaccaacaggcca 198  Q
    ||||||||  ||| |||||| |||||||||||| ||||||||||| |||||||||| || |||||||    
T  21344896 gggagaattgaacatgagaccttgagaggagcacactccaaggtcccaagccaacatcatcaggcca 21344830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 195
Target Start/End: Complemental strand, 47183396 - 47183338
Alignment:
Q  137 aatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacaccaacagg 195  Q
    |||| |||||||||  ||||||||| || ||||||||||||||||||||||||| ||||    
T  47183396 aatcgaacctgagatcttgagaggatcacactccaaggtctcaagccaacaccatcagg 47183338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 118 - 186
Target Start/End: Original strand, 19660642 - 19660711
Alignment:
Q  118 ccgaaatttgca-cagggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaac 186  Q
    |||||||||||| ||| |||||||||||||||||| |   ||||||||||||||||| || |||||||||    
T  19660642 ccgaaatttgcatcagagagaatcaaacctgagacctctggaggagcaaactccaagatcccaagccaac 19660711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 111 - 198
Target Start/End: Complemental strand, 44865436 - 44865347
Alignment:
Q  111 tagtccgccgaaatttgcacaggg-agaatcaaacctgagacattgag-aggagcaaactccaaggtctcaagccaacaccaacaggcca 198  Q
    |||||| |||||||| |||||||| |||||| ||||| |||| ||||| ||||||| ||  ||||| ||||||||||||||| |||||||    
T  44865436 tagtccaccgaaattggcacaggggagaatcgaacctaagaccttgaggaggagcacacatcaaggactcaagccaacaccatcaggcca 44865347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 118 - 186
Target Start/End: Complemental strand, 45302926 - 45302857
Alignment:
Q  118 ccgaaatttgcac-agggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaac 186  Q
    ||||||||||||| || ||||||||||||||| |  ||||||| ||||||||||||| |||||| |||||    
T  45302926 ccgaaatttgcactagagagaatcaaacctgaaaacttgagagaagcaaactccaagatctcaaaccaac 45302857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 190
Target Start/End: Complemental strand, 17701952 - 17701896
Alignment:
Q  134 gagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacacca 190  Q
    ||||||| || ||||||| |||||||||||| | ||||| |||||||||||||||||    
T  17701952 gagaatcgaatctgagaccttgagaggagcacattccaaagtctcaagccaacacca 17701896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 198
Target Start/End: Complemental strand, 23760849 - 23760785
Alignment:
Q  134 gagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacaccaacaggcca 198  Q
    |||||||||| || ||||||||||| || |||||| |||| |||||||||||||| | |||||||    
T  23760849 gagaatcaaatctaagacattgagatgaacaaacttcaagatctcaagccaacactatcaggcca 23760785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 190
Target Start/End: Original strand, 5795405 - 5795464
Alignment:
Q  132 gggagaatcaaacctgagacattga-gaggagcaaactccaaggtctcaagccaacacca 190  Q
    |||||||||||||||||||| |||| |||||||| ||||||||||  |||| ||||||||    
T  5795405 gggagaatcaaacctgagaccttgaggaggagcatactccaaggtgccaagtcaacacca 5795464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 190
Target Start/End: Original strand, 8325375 - 8325434
Alignment:
Q  132 gggagaatcaaacctgagacattgag-aggagcaaactccaaggtctcaagccaacacca 190  Q
    ||||||||| ||||| |||| ||||| | ||||| |||||||||||||||||||||||||    
T  8325375 gggagaatcgaacctaagaccttgaggatgagcacactccaaggtctcaagccaacacca 8325434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 198
Target Start/End: Original strand, 39030134 - 39030176
Alignment:
Q  156 agaggagcaaactccaaggtctcaagccaacaccaacaggcca 198  Q
    ||||||||| ||||||||||| ||||||||||||| |||||||    
T  39030134 agaggagcacactccaaggtcccaagccaacaccaccaggcca 39030176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 4088321 - 4088264
Alignment:
Q  133 ggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacacca 190  Q
    |||||||| |||||||||| |||| |||| ||  ||||||||| ||||||||||||||    
T  4088321 ggagaatcgaacctgagaccttgaaaggaccaccctccaaggtttcaagccaacacca 4088264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 186
Target Start/End: Original strand, 40058962 - 40059031
Alignment:
Q  118 ccgaaatttgcac-agggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaac 186  Q
    |||||||| |||| || ||||||| |||||||||| |  |||||||||||||||||| || |||||||||    
T  40058962 ccgaaattggcaccagagagaatcgaacctgagacctctagaggagcaaactccaagatcccaagccaac 40059031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 188
Target Start/End: Complemental strand, 46295177 - 46295120
Alignment:
Q  132 gggagaatcaaacctgagacattgag-aggagcaaactccaaggtctcaagccaacac 188  Q
    ||||||||| |||||||||| ||||| ||||||| ||||||| ||| |||||||||||    
T  46295177 gggagaatcgaacctgagaccttgaggaggagcacactccaatgtcccaagccaacac 46295120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 190
Target Start/End: Original strand, 32475093 - 32475149
Alignment:
Q  134 gagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacacca 190  Q
    ||||||| |||||||||| ||||||||||   |||||| |||| |||||||||||||    
T  32475093 gagaatcgaacctgagaccttgagaggagttcactccagggtcccaagccaacacca 32475149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 187
Target Start/End: Complemental strand, 32992692 - 32992636
Alignment:
Q  132 gggagaatcaaacctgagacattgag-aggagcaaactccaaggtctcaagccaaca 187  Q
    ||||||||| ||| |||||| ||||| ||||||| ||||||||||| ||||||||||    
T  32992692 gggagaatcgaacttgagaccttgaggaggagcacactccaaggtcccaagccaaca 32992636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 186
Target Start/End: Original strand, 43352451 - 43352503
Alignment:
Q  134 gagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaac 186  Q
    ||||||| ||||||||   ||||||||||||||||||| | ||||||||||||    
T  43352451 gagaatcgaacctgagttcttgagaggagcaaactccatgatctcaagccaac 43352503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 4e-20; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 118 - 188
Target Start/End: Original strand, 40136945 - 40137015
Alignment:
Q  118 ccgaaatttgcacagggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacac 188  Q
    |||||||| |||| |||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||    
T  40136945 ccgaaattggcaccgggagaatcaaacctgagaccttgagaggagcacactccaaggtcccaagccaacac 40137015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 132 - 198
Target Start/End: Complemental strand, 6530886 - 6530820
Alignment:
Q  132 gggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacaccaacaggcca 198  Q
    ||||||||| ||||||||||||||||||||||| ||||| ||||| ||||||||||||| |||||||    
T  6530886 gggagaatcgaacctgagacattgagaggagcacactcctaggtcccaagccaacaccaccaggcca 6530820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 198
Target Start/End: Original strand, 22268935 - 22268996
Alignment:
Q  137 aatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacaccaacaggcca 198  Q
    |||||||| |||||| |||||| ||||| ||||||||||| ||||||||||||| |||||||    
T  22268935 aatcaaacttgagaccttgagaagagcacactccaaggtcccaagccaacaccaccaggcca 22268996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 34778809 - 34778750
Alignment:
Q  137 aatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacaccaacaggc 196  Q
    |||||||| |||||| |||| ||||||| ||| ||||||||||||||||||||| |||||    
T  34778809 aatcaaacttgagaccttgaaaggagcacactgcaaggtctcaagccaacaccaccaggc 34778750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 26168977 - 26169023
Alignment:
Q  136 gaatcaaacctgagacattgagaggagcaaactccaaggtctcaagc 182  Q
    |||||||||||||||| ||||||||||||||||||||| || |||||    
T  26168977 gaatcaaacctgagaccttgagaggagcaaactccaagatcccaagc 26169023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 142 - 198
Target Start/End: Complemental strand, 26688935 - 26688878
Alignment:
Q  142 aacctgagacattgag-aggagcaaactccaaggtctcaagccaacaccaacaggcca 198  Q
    |||||||||| ||||| ||||||| ||||||||||| ||||||||||||| |||||||    
T  26688935 aacctgagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaggcca 26688878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 135 - 190
Target Start/End: Original strand, 11793520 - 11793576
Alignment:
Q  135 agaatcaaacctgagacattgag-aggagcaaactccaaggtctcaagccaacacca 190  Q
    |||||||||||| |||| ||||| ||||||| ||||||||||| ||||| |||||||    
T  11793520 agaatcaaacctaagaccttgaggaggagcacactccaaggtcccaagcgaacacca 11793576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 4e-17; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 133 - 198
Target Start/End: Original strand, 16172981 - 16173046
Alignment:
Q  133 ggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacaccaacaggcca 198  Q
    |||||||| |||||||||| |||||||||||| ||||||||||||||||||||||| | |||||||    
T  16172981 ggagaatcgaacctgagaccttgagaggagcacactccaaggtctcaagccaacactaccaggcca 16173046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 137 - 188
Target Start/End: Original strand, 14656645 - 14656696
Alignment:
Q  137 aatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacac 188  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  14656645 aatcgaacctgagaccttgagaggagcaaactccaaggtctcaagccaacac 14656696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 132 - 190
Target Start/End: Original strand, 31669021 - 31669079
Alignment:
Q  132 gggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacacca 190  Q
    ||||||||| ||||| |||| |||||||||||| ||||||||||| |||||||||||||    
T  31669021 gggagaatcgaacctaagaccttgagaggagcagactccaaggtcccaagccaacacca 31669079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 135 - 198
Target Start/End: Complemental strand, 19373315 - 19373252
Alignment:
Q  135 agaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacaccaacaggcca 198  Q
    |||||| ||||| | || ||||||| |||| ||||||||||||||||||||||||| |||||||    
T  19373315 agaatcgaacctaaaaccttgagagtagcacactccaaggtctcaagccaacaccaccaggcca 19373252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 186
Target Start/End: Original strand, 15485420 - 15485470
Alignment:
Q  136 gaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaac 186  Q
    ||||| |||||||||| |||||||||||| ||||||||||| |||||||||    
T  15485420 gaatcgaacctgagaccttgagaggagcacactccaaggtcccaagccaac 15485470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 107 - 190
Target Start/End: Complemental strand, 3315321 - 3315236
Alignment:
Q  107 aaattagtccgccgaaatttgcaca-gggagaatcaaacctgagacattgag-aggagcaaactccaaggtctcaagccaacacca 190  Q
    |||||| |||||| ||||| ||||  ||||||||| |||||||||| ||||| ||||||  ||||||||||||||||| |||||||    
T  3315321 aaattaatccgcctaaattggcacctgggagaatcgaacctgagaccttgaggaggagcgcactccaaggtctcaagctaacacca 3315236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 186
Target Start/End: Original strand, 930614 - 930664
Alignment:
Q  136 gaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaac 186  Q
    ||||| |||||||||| ||||||||||||||||| ||  ||||||||||||    
T  930614 gaatcgaacctgagactttgagaggagcaaactctaaaatctcaagccaac 930664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 173
Target Start/End: Original strand, 2499300 - 2499344
Alignment:
Q  129 acagggagaatcaaacctgagacattgagaggagcaaactccaag 173  Q
    |||||||||||| |||||||||| |||| ||||||||| ||||||    
T  2499300 acagggagaatcgaacctgagactttgaaaggagcaaattccaag 2499344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 185
Target Start/End: Original strand, 11465037 - 11465085
Alignment:
Q  137 aatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaa 185  Q
    |||| |||||||||||||  ||||||||||||||||| | |||||||||    
T  11465037 aatcgaacctgagacatttggaggagcaaactccaagatttcaagccaa 11465085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 16247136 - 16247184
Alignment:
Q  142 aacctgagacattgagaggagcaaactccaaggtctcaagccaacacca 190  Q
    |||||||||| |||| ||||||| ||| ||||||| |||||||||||||    
T  16247136 aacctgagaccttgataggagcacactgcaaggtcccaagccaacacca 16247184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 37397787 - 37397731
Alignment:
Q  130 cagggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaac 186  Q
    ||||| ||||||||||| |||| ||  ||||||||||||||||| || |||||||||    
T  37397787 cagggggaatcaaaccttagacctttggaggagcaaactccaagatcacaagccaac 37397731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 130 - 190
Target Start/End: Complemental strand, 37421366 - 37421306
Alignment:
Q  130 cagggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacacca 190  Q
    ||||||||||| || |||||||  |||||||||||||||| |||||| | || ||||||||    
T  37421366 cagggagaatcgaatctgagaccgtgagaggagcaaactctaaggtcccgagtcaacacca 37421306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 40330691 - 40330655
Alignment:
Q  146 tgagacattgagaggagcaaactccaaggtctcaagc 182  Q
    |||||| ||||||||||||||||||||| ||||||||    
T  40330691 tgagaccttgagaggagcaaactccaagatctcaagc 40330655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 102 - 181
Target Start/End: Original strand, 3433567 - 3433647
Alignment:
Q  102 aagtcaaattagtccgccgaaatttgcacag-ggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaag 181  Q
    |||||||| |||||| ||||||| ||||| | ||| |||| |||||||||| |||||||||||||||||||||||||||||    
T  3433567 aagtcaaactagtccaccgaaatatgcaccgaggaaaatcgaacctgagaccttgagaggagcaaactccaaggtctcaag 3433647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 118 - 198
Target Start/End: Original strand, 6691532 - 6691613
Alignment:
Q  118 ccgaaatttgcacagg-gagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacaccaacaggcca 198  Q
    |||||||| |||| || ||||||| |||||||||| |||||||||||| |||||||||||| ||| |||||||| |||||||    
T  6691532 ccgaaattggcaccggagagaatcgaacctgagaccttgagaggagcacactccaaggtctaaagtcaacaccaccaggcca 6691613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 142 - 189
Target Start/End: Original strand, 6384009 - 6384056
Alignment:
Q  142 aacctgagacattgagaggagcaaactccaaggtctcaagccaacacc 189  Q
    |||||||||| |||||||||||| ||||||||||| ||||||||||||    
T  6384009 aacctgagaccttgagaggagcacactccaaggtcccaagccaacacc 6384056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 118 - 186
Target Start/End: Complemental strand, 9208339 - 9208270
Alignment:
Q  118 ccgaaatttgcac-agggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaac 186  Q
    |||||||| |||| |||| ||||| |||||||||| ||||||||||||||||||||| || ||| |||||    
T  9208339 ccgaaattggcaccagggggaatcgaacctgagaccttgagaggagcaaactccaagatcccaatccaac 9208270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 196
Target Start/End: Original strand, 20864218 - 20864266
Alignment:
Q  148 agacattgagaggagcaaactccaaggtctcaagccaacaccaacaggc 196  Q
    ||||||||||||||||| |||||||||||  |||||||||||| |||||    
T  20864218 agacattgagaggagcacactccaaggtcctaagccaacaccaccaggc 20864266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 198
Target Start/End: Complemental strand, 28028611 - 28028543
Alignment:
Q  130 cagggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacaccaacaggcca 198  Q
    ||||||||||| ||| |||||| |||||||||||  |||| |||||| |||| |||||||| |||||||    
T  28028611 cagggagaatcgaacatgagaccttgagaggagctcactcaaaggtcccaagtcaacaccaccaggcca 28028543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 33499536 - 33499492
Alignment:
Q  142 aacctgagacattgagaggagcaaactccaaggtctcaagccaac 186  Q
    |||||||||| ||||||||||||||||||||| || |||||||||    
T  33499536 aacctgagaccttgagaggagcaaactccaagatcccaagccaac 33499492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 188
Target Start/End: Complemental strand, 15929944 - 15929889
Alignment:
Q  134 gagaatcaaacctgagacattgaga-ggagcaaactccaaggtctcaagccaacac 188  Q
    ||||||||||| |||||| |||| | ||||||||||| ||||||||||||||||||    
T  15929944 gagaatcaaacttgagactttgacaaggagcaaactcgaaggtctcaagccaacac 15929889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 198
Target Start/End: Complemental strand, 3869775 - 3869709
Alignment:
Q  132 gggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacaccaacaggcca 198  Q
    ||||||||| ||| |||||| |||| || |||| |||| ||| |||||||||||||||| |||||||    
T  3869775 gggagaatcgaacatgagaccttgatagaagcacactcgaagatctcaagccaacaccatcaggcca 3869709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 9877048 - 9876995
Alignment:
Q  137 aatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacacca 190  Q
    ||||||| |||| || |||||||||||| ||||||| |||||||| ||||||||    
T  9877048 aatcaaatctgataccttgagaggagcacactccaaagtctcaagtcaacacca 9876995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 190
Target Start/End: Complemental strand, 20863453 - 20863396
Alignment:
Q  134 gagaatcaaacctgagacattgag-aggagcaaactccaaggtctcaagccaacacca 190  Q
    |||||||||| ||||||| ||||| ||||||| ||||||| ||| |||||||||||||    
T  20863453 gagaatcaaatctgagaccttgaggaggagcacactccaaagtcccaagccaacacca 20863396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 190
Target Start/End: Original strand, 24507558 - 24507591
Alignment:
Q  157 gaggagcaaactccaaggtctcaagccaacacca 190  Q
    |||||||||||||||||||| |||||||||||||    
T  24507558 gaggagcaaactccaaggtcccaagccaacacca 24507591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 2e-16; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 130 - 190
Target Start/End: Complemental strand, 37047066 - 37047006
Alignment:
Q  130 cagggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacacca 190  Q
    ||||| |||||||||||||||| |||||||||||| ||||||||||| |||||||||||||    
T  37047066 cagggggaatcaaacctgagaccttgagaggagcacactccaaggtcccaagccaacacca 37047006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 39964580 - 39964527
Alignment:
Q  136 gaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacacc 189  Q
    |||||||||||||||| |||||||||||| ||||||||||| ||||||||||||    
T  39964580 gaatcaaacctgagaccttgagaggagcacactccaaggtcgcaagccaacacc 39964527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 4825050 - 4824992
Alignment:
Q  133 ggagaatcaaacctgagacattga-gaggagcaaactccaaggtctcaagccaacacca 190  Q
    ||||||||||||||||||| |||| |||||||| ||||||||||| |||||||||||||    
T  4825050 ggagaatcaaacctgagaccttgaagaggagcacactccaaggtcccaagccaacacca 4824992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 132 - 198
Target Start/End: Original strand, 15581138 - 15581204
Alignment:
Q  132 gggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacaccaacaggcca 198  Q
    ||||||||  |||||||||| || ||||||||| ||||||||||| ||||||||||||| |||||||    
T  15581138 gggagaattgaacctgagacctttagaggagcacactccaaggtcccaagccaacaccaccaggcca 15581204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 132 - 186
Target Start/End: Complemental strand, 38939281 - 38939227
Alignment:
Q  132 gggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaac 186  Q
    |||||||||||||| ||||| |||||||||||| ||||||||||| |||||||||    
T  38939281 gggagaatcaaaccagagaccttgagaggagcacactccaaggtcccaagccaac 38939227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 136 - 190
Target Start/End: Original strand, 41470611 - 41470665
Alignment:
Q  136 gaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacacca 190  Q
    ||||| ||| |||||| |||||||||||| |||||||||||||||||||||||||    
T  41470611 gaatcgaacttgagaccttgagaggagcatactccaaggtctcaagccaacacca 41470665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 120 - 190
Target Start/End: Original strand, 44417446 - 44417516
Alignment:
Q  120 gaaatttgcacagggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacacca 190  Q
    |||||| |||| ||| |||||||||||||||| ||||||| |||| ||||||||||| ||||||| |||||    
T  44417446 gaaattggcaccgggggaatcaaacctgagaccttgagagcagcacactccaaggtcccaagccagcacca 44417516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 134 - 186
Target Start/End: Complemental strand, 10059125 - 10059073
Alignment:
Q  134 gagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaac 186  Q
    |||||| ||||||||||| ||||||||||||||||||||| ||||||| ||||    
T  10059125 gagaattaaacctgagactttgagaggagcaaactccaagatctcaagtcaac 10059073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 190
Target Start/End: Complemental strand, 39012366 - 39012312
Alignment:
Q  136 gaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacacca 190  Q
    ||||||||||| |||| |||||| ||||| ||||||||||| |||||||||||||    
T  39012366 gaatcaaacctaagaccttgagaagagcacactccaaggtcccaagccaacacca 39012312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 39714776 - 39714829
Alignment:
Q  133 ggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaac 186  Q
    |||||||||||| |||||| |||||||||||| |||||||| || |||||||||    
T  39714776 ggagaatcaaacttgagaccttgagaggagcacactccaagatcccaagccaac 39714829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 40802193 - 40802246
Alignment:
Q  133 ggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaac 186  Q
    |||||||||||| |||||| |||||| |||||||||||||  ||||||||||||    
T  40802193 ggagaatcaaacatgagaccttgagatgagcaaactccaatatctcaagccaac 40802246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 18928401 - 18928353
Alignment:
Q  142 aacctgagacattgagaggagcaaactccaaggtctcaagccaacacca 190  Q
    |||||||||| |||||||||||| |||  ||||||||||||||||||||    
T  18928401 aacctgagaccttgagaggagcacactttaaggtctcaagccaacacca 18928353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 198
Target Start/End: Original strand, 24857825 - 24857893
Alignment:
Q  130 cagggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacaccaacaggcca 198  Q
    |||| ||||||||||||||||  ||||||| |||  ||||||||||| | ||||||||||| |||||||    
T  24857825 caggtagaatcaaacctgagagcttgagagaagcccactccaaggtccctagccaacaccaccaggcca 24857893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 190
Target Start/End: Complemental strand, 34228951 - 34228895
Alignment:
Q  134 gagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacacca 190  Q
    ||||||| |||||||||| ||||||||| || ||||| ||||| |||||||||||||    
T  34228951 gagaatccaacctgagaccttgagaggaacacactccgaggtcccaagccaacacca 34228895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 190
Target Start/End: Original strand, 30043600 - 30043651
Alignment:
Q  139 tcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacacca 190  Q
    ||||||||||||| |||| || |||| |||||||||||||||||| ||||||    
T  30043600 tcaaacctgagaccttgatagaagcacactccaaggtctcaagcctacacca 30043651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 198
Target Start/End: Original strand, 31605844 - 31605911
Alignment:
Q  132 gggagaatcaaacctgagacattgag-aggagcaaactccaaggtctcaagccaacaccaacaggcca 198  Q
    ||||||||| ||| |||||| ||||| ||||||| ||| ||||||| ||||||||||||| |||||||    
T  31605844 gggagaatcgaacttgagaccttgaggaggagcacacttcaaggtcccaagccaacaccatcaggcca 31605911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 190
Target Start/End: Complemental strand, 36428792 - 36428733
Alignment:
Q  132 gggagaatcaaacctgagacattgag-aggagcaaactccaaggtctcaagccaacacca 190  Q
    ||||||||||||| |||||| ||||| ||||||| ||||||||||  |||||||||||||    
T  36428792 gggagaatcaaacatgagaccttgaggaggagcatactccaaggtaccaagccaacacca 36428733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 198
Target Start/End: Complemental strand, 45266914 - 45266847
Alignment:
Q  132 gggagaatcaaacctgagacattgag-aggagcaaactccaaggtctcaagccaacaccaacaggcca 198  Q
    ||||||||| |||||||||| ||||| ||||||||||||||| | | |||| ||||||| ||||||||    
T  45266914 gggagaatcgaacctgagaccttgaggaggagcaaactccaaagccccaagtcaacaccgacaggcca 45266847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 186
Target Start/End: Complemental strand, 1138671 - 1138597
Alignment:
Q  113 gtccgccgaaatttgcac-agggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaac 186  Q
    |||| |||||||| |||| || |||| || ||||| |||| |||||||||||| |||||||| ||||||||||||    
T  1138671 gtccaccgaaattggcactagagagattcgaacctaagaccttgagaggagcacactccaagatctcaagccaac 1138597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 190
Target Start/End: Original strand, 6127983 - 6128041
Alignment:
Q  132 gggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacacca 190  Q
    ||||||||| ||| |||||| ||||||||||||  |||||||||| ||| |||||||||    
T  6127983 gggagaatcgaacttgagaccttgagaggagcacgctccaaggtcccaaaccaacacca 6128041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 20203940 - 20203886
Alignment:
Q  137 aatcaaacctgagacattgaga-ggagcaaactccaaggtctcaagccaacacca 190  Q
    ||||||||||||||| |||||| |||||| ||||||||||| ||||| |||||||    
T  20203940 aatcaaacctgagactttgagaaggagcatactccaaggtcccaagctaacacca 20203886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 186
Target Start/End: Complemental strand, 32729613 - 32729563
Alignment:
Q  136 gaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaac 186  Q
    ||||| |||||||||| ||||||||||||||||| ||| || |||||||||    
T  32729613 gaatcgaacctgagactttgagaggagcaaactcgaagatcccaagccaac 32729563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 186
Target Start/End: Original strand, 37351590 - 37351640
Alignment:
Q  136 gaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaac 186  Q
    ||||| |||||||||||||  ||||||||||||||||| || |||||||||    
T  37351590 gaatcgaacctgagacatttggaggagcaaactccaagatcccaagccaac 37351640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 49101763 - 49101820
Alignment:
Q  130 cagggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaaca 187  Q
    ||||| ||||||||  | |||| |||||||||||| |||||||||||| |||||||||    
T  49101763 cagggggaatcaaatgtaagaccttgagaggagcacactccaaggtctgaagccaaca 49101820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 52135197 - 52135148
Alignment:
Q  137 aatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaac 186  Q
    |||| ||||||||||||||||| |||||||||||||| || |||| ||||    
T  52135197 aatcgaacctgagacattgagatgagcaaactccaagatcccaagtcaac 52135148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 130 - 190
Target Start/End: Original strand, 22585200 - 22585260
Alignment:
Q  130 cagggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacacca 190  Q
    |||| |||||||||| | ||||||||||||||| | ||||||||||  ||||||| |||||    
T  22585200 caggaagaatcaaacttaagacattgagaggagtacactccaaggtgccaagccatcacca 22585260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 138 - 198
Target Start/End: Original strand, 44660635 - 44660695
Alignment:
Q  138 atcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacaccaacaggcca 198  Q
    |||||||||||||| |||||| ||||||||| |||  |||||||  ||||||| |||||||    
T  44660635 atcaaacctgagactttgagatgagcaaacttcaacatctcaagttaacaccatcaggcca 44660695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 52116776 - 52116844
Alignment:
Q  131 agggagaatcaaacctgagacattga-gaggagcaaactccaaggtctcaagccaacaccaacaggcca 198  Q
    |||||||||  ||||||||||||||| |||||||| ||||| | ||| |||||||| |||| |||||||    
T  52116776 agggagaattgaacctgagacattgaggaggagcacactcccaagtcccaagccaataccaccaggcca 52116844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 132 - 198
Target Start/End: Complemental strand, 43303837 - 43303771
Alignment:
Q  132 gggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacaccaacaggcca 198  Q
    |||||||||||||||||||| | ||||||||||  |||||||||||||||||| ||||| |||||||    
T  43303837 gggagaatcaaacctgagacctggagaggagcacgctccaaggtctcaagccatcaccaccaggcca 43303771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 198
Target Start/End: Original strand, 42799745 - 42799810
Alignment:
Q  133 ggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacaccaacaggcca 198  Q
    ||||| || |||||||||| |||||||||||| ||||||||||| ||||||||||||| |||||||    
T  42799745 ggagagtcgaacctgagaccttgagaggagcacactccaaggtcccaagccaacaccaccaggcca 42799810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 187
Target Start/End: Complemental strand, 34844446 - 34844395
Alignment:
Q  136 gaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaaca 187  Q
    ||||| |||||||||| |||||||||||| ||||||||||||||||||||||    
T  34844446 gaatcgaacctgagaccttgagaggagcacactccaaggtctcaagccaaca 34844395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 26158886 - 26158834
Alignment:
Q  136 gaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacac 188  Q
    |||| ||||||||||| |||||||||||| |||||||| ||||||||||||||    
T  26158886 gaatgaaacctgagaccttgagaggagcacactccaagatctcaagccaacac 26158834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 135 - 198
Target Start/End: Original strand, 26871503 - 26871567
Alignment:
Q  135 agaatcaaacctgagacattgag-aggagcaaactccaaggtctcaagccaacaccaacaggcca 198  Q
    |||||||||||| |||| ||||| ||||| ||||||||||||| ||||||||||||| |||||||    
T  26871503 agaatcaaacctcagactttgaggaggagaaaactccaaggtcccaagccaacaccaccaggcca 26871567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 132 - 196
Target Start/End: Complemental strand, 40268568 - 40268504
Alignment:
Q  132 gggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacaccaacaggc 196  Q
    ||||||||| |||||||||| || ||||||||  ||||||||||| ||||||||||||| |||||    
T  40268568 gggagaatcgaacctgagaccttaagaggagcccactccaaggtcccaagccaacaccaccaggc 40268504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 135 - 190
Target Start/End: Complemental strand, 44069835 - 44069779
Alignment:
Q  135 agaatcaaacctgagacattgag-aggagcaaactccaaggtctcaagccaacacca 190  Q
    ||||||||||||||||| ||||| ||||||| |||||||| ||||||||||||||||    
T  44069835 agaatcaaacctgagaccttgaggaggagcacactccaagatctcaagccaacacca 44069779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 190
Target Start/End: Original strand, 35623258 - 35623321
Alignment:
Q  127 gcacagggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacacca 190  Q
    |||| ||| ||||| ||| |||||| |||||||||||| ||||||||||| |||||||||||||    
T  35623258 gcaccgggtgaatcgaacatgagaccttgagaggagcacactccaaggtcccaagccaacacca 35623321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 186
Target Start/End: Original strand, 4252525 - 4252575
Alignment:
Q  136 gaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaac 186  Q
    ||||||||| |||||| |||||||||||| |||||||| ||||||||||||    
T  4252525 gaatcaaacttgagaccttgagaggagcacactccaagatctcaagccaac 4252575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 133 - 190
Target Start/End: Original strand, 10682941 - 10682998
Alignment:
Q  133 ggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacacca 190  Q
    |||||||  |||||||||| ||||||| |||| |||||||||||||||||||| ||||    
T  10682941 ggagaattgaacctgagactttgagagaagcacactccaaggtctcaagccaatacca 10682998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 133 - 190
Target Start/End: Original strand, 18316496 - 18316553
Alignment:
Q  133 ggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacacca 190  Q
    |||||||| ||||| |||| |||||||||||| ||||||||||| ||||||| |||||    
T  18316496 ggagaatcgaacctaagaccttgagaggagcacactccaaggtcccaagccagcacca 18316553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 190
Target Start/End: Original strand, 51257602 - 51257658
Alignment:
Q  134 gagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacacca 190  Q
    |||||||||||||||||  |||| ||||||| |||||||||| ||||| ||||||||    
T  51257602 gagaatcaaacctgagattttgaaaggagcacactccaaggtttcaagtcaacacca 51257658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 53167793 - 53167845
Alignment:
Q  137 aatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacacc 189  Q
    |||||||| |||||| ||||||| |||| |||||| |||||||||||||||||    
T  53167793 aatcaaacttgagaccttgagagaagcacactccatggtctcaagccaacacc 53167845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 1712806 - 1712861
Alignment:
Q  133 ggagaatcaaacctgaga-cattgagaggagcaaactccaaggtctcaagccaaca 187  Q
    |||||||||||||||||| |||  ||| ||||| ||||||||||||||||||||||    
T  1712806 ggagaatcaaacctgagaacataaagatgagcacactccaaggtctcaagccaaca 1712861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 118 - 172
Target Start/End: Complemental strand, 40777107 - 40777052
Alignment:
Q  118 ccgaaatttgcac-agggagaatcaaacctgagacattgagaggagcaaactccaa 172  Q
    |||||||| |||| || |||||||||||||||||| |||||||||||| |||||||    
T  40777107 ccgaaattggcactagagagaatcaaacctgagaccttgagaggagcacactccaa 40777052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 190
Target Start/End: Original strand, 11092151 - 11092224
Alignment:
Q  118 ccgaaatttgcac-agggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacacca 190  Q
    |||||||| |||| |||||||||| ||  |||||| ||||||| |||| ||| ||||||| |||||||||||||    
T  11092151 ccgaaattagcaccagggagaatcgaagttgagaccttgagagtagcacactacaaggtcccaagccaacacca 11092224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 173
Target Start/End: Complemental strand, 36660842 - 36660801
Alignment:
Q  132 gggagaatcaaacctgagacattgagaggagcaaactccaag 173  Q
    ||||||||  |||||||||| |||||||||||||||||||||    
T  36660842 gggagaattgaacctgagaccttgagaggagcaaactccaag 36660801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 53863874 - 53863919
Alignment:
Q  142 aacctgagacattgagaggagcaaactccaaggtctcaagccaaca 187  Q
    ||||| |||| |||||||||||| ||||||||||| ||||||||||    
T  53863874 aacctaagaccttgagaggagcacactccaaggtcccaagccaaca 53863919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 14339691 - 14339623
Alignment:
Q  131 agggagaatcaaacctgagacattga-gaggagcaaactccaaggtctcaagccaacaccaacaggcca 198  Q
    |||||||||| ||||||||||||||| |||||||| ||||| |  || |||||||| |||| |||||||    
T  14339691 agggagaatcgaacctgagacattgaggaggagcacactcccaaatcccaagccaataccaccaggcca 14339623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 135 - 190
Target Start/End: Complemental strand, 45449676 - 45449623
Alignment:
Q  135 agaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacacca 190  Q
    |||||| ||||||||||||| |   ||||| |||||||||||||||||||||||||    
T  45449676 agaatcgaacctgagacattaac--gagcatactccaaggtctcaagccaacacca 45449623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 198
Target Start/End: Complemental strand, 26482171 - 26482106
Alignment:
Q  133 ggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacaccaacaggcca 198  Q
    |||||||| |||||||||| |||||||||||| ||||| ||||| ||||||||||||| |||||||    
T  26482171 ggagaatcgaacctgagaccttgagaggagcacactcctaggtcccaagccaacaccatcaggcca 26482106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 132 - 186
Target Start/End: Original strand, 6099515 - 6099569
Alignment:
Q  132 gggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaac 186  Q
    ||||||||| |||||||||| |||||||||||| ||||||||||| |||||||||    
T  6099515 gggagaatcgaacctgagaccttgagaggagcacactccaaggtcccaagccaac 6099569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 12517747 - 12517805
Alignment:
Q  130 cagggagaatcaaacctgagacattgag-aggagcaaactccaaggtctcaagccaaca 187  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||||||| ||||||||||    
T  12517747 cagggagaatcaaacatgagaccttgaggaggagcaaactccaaggtcccaagccaaca 12517805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 40591250 - 40591201
Alignment:
Q  137 aatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaac 186  Q
    ||||||||||||||| |||||||||||| |||||||| ||||||||||||    
T  40591250 aatcaaacctgagactttgagaggagcacactccaagatctcaagccaac 40591201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 139 - 190
Target Start/End: Original strand, 13747637 - 13747688
Alignment:
Q  139 tcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacacca 190  Q
    ||||||||||||| ||| |||||||| ||||||||||| |||||||||||||    
T  13747637 tcaaacctgagaccttgggaggagcatactccaaggtcccaagccaacacca 13747688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 132 - 195
Target Start/End: Complemental strand, 18825420 - 18825357
Alignment:
Q  132 gggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacaccaacagg 195  Q
    |||| |||||||| |||||| |||||||||||| ||||| ||||| ||||||||||||| ||||    
T  18825420 gggaaaatcaaacttgagaccttgagaggagcacactcctaggtcccaagccaacaccaccagg 18825357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 198
Target Start/End: Complemental strand, 16525257 - 16525191
Alignment:
Q  132 gggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacaccaacaggcca 198  Q
    ||||||||| |||||||||| |||||||  ||| ||||||| ||| ||||||||||||| |||||||    
T  16525257 gggagaatcgaacctgagaccttgagagtcgcacactccaacgtcccaagccaacaccatcaggcca 16525191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 31681129 - 31681071
Alignment:
Q  132 gggagaatcaaacctgagacattgag-aggagcaaactccaaggtctcaagccaacacc 189  Q
    ||||||||| |||||||||| ||||| || |||| ||||||||||||||||||||||||    
T  31681129 gggagaatcgaacctgagactttgaggagaagcacactccaaggtctcaagccaacacc 31681071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 188
Target Start/End: Original strand, 43963983 - 43964041
Alignment:
Q  130 cagggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacac 188  Q
    ||||| ||||||||| |||||| |||||||||||| ||||||||||| ||| |||||||    
T  43963983 cagggggaatcaaacatgagaccttgagaggagcacactccaaggtcccaaaccaacac 43964041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 3697378 - 3697454
Alignment:
Q  115 ccgccgaaatttgcacag-ggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacacca 190  Q
    ||||||||||| |||| | |||||||| |||| ||||| ||||||||||||  |||||||||| |||||||| ||||    
T  3697378 ccgccgaaattggcaccgaggagaatcgaaccagagaccttgagaggagcactctccaaggtcccaagccaatacca 3697454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 190
Target Start/End: Original strand, 26176320 - 26176380
Alignment:
Q  130 cagggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacacca 190  Q
    ||||||||||| || ||||||| |||||||||||| || |||||||| |||| ||||||||    
T  26176320 cagggagaatcgaatctgagaccttgagaggagcacaccccaaggtcccaagtcaacacca 26176380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 186
Target Start/End: Original strand, 35092594 - 35092650
Alignment:
Q  131 agggagaatcaaacctgagacattgaga-ggagcaaactccaaggtctcaagccaac 186  Q
    ||||||||||||||||||||  |||||| |||||  |||||||||||||||||||||    
T  35092594 agggagaatcaaacctgagatcttgagaaggagctcactccaaggtctcaagccaac 35092650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 136 - 191
Target Start/End: Complemental strand, 5394085 - 5394030
Alignment:
Q  136 gaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacaccaa 191  Q
    ||||| |||||||||| ||  ||||||||||||||||| |||||||||||| ||||    
T  5394085 gaatcgaacctgagacctttggaggagcaaactccaagatctcaagccaaccccaa 5394030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 186
Target Start/End: Original strand, 6714410 - 6714460
Alignment:
Q  136 gaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaac 186  Q
    |||||||||||||||| |   ||||||||||||||||| ||||||||||||    
T  6714410 gaatcaaacctgagacctctggaggagcaaactccaagatctcaagccaac 6714460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 186
Target Start/End: Original strand, 8192480 - 8192530
Alignment:
Q  136 gaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaac 186  Q
    ||||| |||||||||| |||||||||||| |||||||| || |||||||||    
T  8192480 gaatcgaacctgagaccttgagaggagcacactccaagatcccaagccaac 8192530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 19054093 - 19054044
Alignment:
Q  136 gaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaa 185  Q
    |||||||||||||||| ||  |||||||| |||||||| |||||||||||    
T  19054093 gaatcaaacctgagacctttggaggagcagactccaagatctcaagccaa 19054044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 25384610 - 25384557
Alignment:
Q  137 aatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacacca 190  Q
    |||| |||| |||||  ||||||||||| ||||||||||| |||||||||||||    
T  25384610 aatcgaacccgagaccctgagaggagcacactccaaggtcccaagccaacacca 25384557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 190
Target Start/End: Complemental strand, 12877219 - 12877174
Alignment:
Q  145 ctgagacattgagaggagcaaactccaaggtctcaagccaacacca 190  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||    
T  12877219 ctgagacattgagaggagcaaactccaaggtcccaagccaaaacca 12877174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 132 - 195
Target Start/End: Original strand, 5579230 - 5579294
Alignment:
Q  132 gggagaatcaaacctgagacattgag-aggagcaaactccaaggtctcaagccaacaccaacagg 195  Q
    |||||| ||||||||||||| ||||| ||||||| ||||||||||| ||||||||||||| ||||    
T  5579230 gggagagtcaaacctgagaccttgaggaggagcacactccaaggtcccaagccaacaccaccagg 5579294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 12425050 - 12424997
Alignment:
Q  137 aatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacacca 190  Q
    ||||||||||||||| |||| || | |||| |||||||||||||||||||||||    
T  12425050 aatcaaacctgagactttgaaagtaacaaaatccaaggtctcaagccaacacca 12424997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 134 - 190
Target Start/End: Original strand, 29385741 - 29385798
Alignment:
Q  134 gagaatcaaacctgagacattgag-aggagcaaactccaaggtctcaagccaacacca 190  Q
    |||||||||||||||||| ||||| ||||||| ||||||| ||| |||||||||||||    
T  29385741 gagaatcaaacctgagaccttgaggaggagcacactccaaagtcccaagccaacacca 29385798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 190
Target Start/End: Original strand, 25956287 - 25956347
Alignment:
Q  130 cagggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacacca 190  Q
    ||||||||||  ||||| |||| |||||||||||| ||||||||||| |||||||| ||||    
T  25956287 cagggagaattgaacctaagaccttgagaggagcacactccaaggtcccaagccaatacca 25956347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 43590988 - 43590920
Alignment:
Q  131 agggagaatcaaacctgagacattga-gaggagcaaactccaaggtctcaagccaacaccaacaggcca 198  Q
    |||||||||| ||||||||||||||| |||||||| ||||| | ||| |||||||| |||| |||||||    
T  43590988 agggagaatcgaacctgagacattgaggaggagcacactcccaagtcccaagccaataccaccaggcca 43590920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 46279093 - 46279049
Alignment:
Q  132 gggagaatcaaacctgagacattgagaggagcaaactccaaggtc 176  Q
    |||||||||||||| ||||| |||||||||||| |||||||||||    
T  46279093 gggagaatcaaaccggagaccttgagaggagcacactccaaggtc 46279049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 141 - 180
Target Start/End: Complemental strand, 13585709 - 13585670
Alignment:
Q  141 aaacctgagacattgagaggagcaaactccaaggtctcaa 180  Q
    ||||||| ||| ||||||||||||||||||||||||||||    
T  13585709 aaacctgcgaccttgagaggagcaaactccaaggtctcaa 13585670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 198
Target Start/End: Original strand, 5273591 - 5273653
Alignment:
Q  137 aatcaaacctgagacattgag-aggagcaaactccaaggtctcaagccaacaccaacaggcca 198  Q
    |||||||||| |||| ||||| ||||||| |||| |||||| ||||||||||||| |||||||    
T  5273591 aatcaaacctaagaccttgaggaggagcacactctaaggtcccaagccaacaccaccaggcca 5273653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 21050151 - 21050193
Alignment:
Q  146 tgagacattgagaggagcaaactccaaggtctcaagccaacac 188  Q
    |||||| |||||||||||| |||||||||||||||||| ||||    
T  21050151 tgagaccttgagaggagcacactccaaggtctcaagcctacac 21050193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 198
Target Start/End: Original strand, 48039628 - 48039710
Alignment:
Q  118 ccgaaatttgcac-agggagaatcaaacctgagacattgaga-ggagcaaactccaaggtctcaagccaacaccaacaggcca 198  Q
    |||||||| |||| |||||||||  |||||||||| ||| || |||||| |||||||| || ||||||||||||| |||||||    
T  48039628 ccgaaattggcaccagggagaatagaacctgagaccttgcgaaggagcatactccaagatcgcaagccaacaccaccaggcca 48039710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 11700256 - 11700191
Alignment:
Q  121 aaatttgcacagggagaatcaaacctgagacattgag-aggagcaaactccaaggtctcaagccaa 185  Q
    ||||| |||||| ||||||| |||||||||| ||||| ||||||||||||  | ||||||||||||    
T  11700256 aaattggcacagagagaatcgaacctgagaccttgaggaggagcaaactctcaagtctcaagccaa 11700191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 198
Target Start/End: Original strand, 18847440 - 18847485
Alignment:
Q  153 ttgagaggagcaaactccaaggtctcaagccaacaccaacaggcca 198  Q
    |||||||||||| |||| ||| |||||||||||||||| |||||||    
T  18847440 ttgagaggagcacactcgaagatctcaagccaacaccaccaggcca 18847485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 173
Target Start/End: Complemental strand, 22696392 - 22696355
Alignment:
Q  136 gaatcaaacctgagacattgagaggagcaaactccaag 173  Q
    |||||||||||||||| |||||||||||| ||||||||    
T  22696392 gaatcaaacctgagaccttgagaggagcacactccaag 22696355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 198
Target Start/End: Complemental strand, 31835274 - 31835205
Alignment:
Q  130 cagggagaatcaaacctgagacattgag-aggagcaaactccaaggtctcaagccaacaccaacaggcca 198  Q
    |||||| |||| |||||||||| ||||| ||||||| ||||||||  | ||||||||||||| |||||||    
T  31835274 cagggataatcgaacctgagaccttgaggaggagcacactccaagcacccaagccaacaccaccaggcca 31835205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 40332170 - 40332121
Alignment:
Q  137 aatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaac 186  Q
    |||| |||||||||| || |||||||||||||||||| | ||||||||||    
T  40332170 aatcgaacctgagacctttagaggagcaaactccaagatttcaagccaac 40332121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 28089882 - 28089838
Alignment:
Q  142 aacctgagacattgagaggagcaaactccaaggtctcaagccaac 186  Q
    ||||||||||||   ||||||||||||||||| ||||||||||||    
T  28089882 aacctgagacatctggaggagcaaactccaagatctcaagccaac 28089838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 48125181 - 48125229
Alignment:
Q  142 aacctgagacattgagaggagcaaactccaaggtctcaagccaacacca 190  Q
    |||||||||| ||  |||||||| ||||||||||| |||||||||||||    
T  48125181 aacctgagaccttcggaggagcacactccaaggtcccaagccaacacca 48125229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 133 - 198
Target Start/End: Original strand, 17721 - 17786
Alignment:
Q  133 ggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacaccaacaggcca 198  Q
    |||||||| |||||||||| |||||||||| | |||||||||||| | ||||| |||| |||||||    
T  17721 ggagaatcgaacctgagaccttgagaggagaacactccaaggtcttacgccaataccaccaggcca 17786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 190
Target Start/End: Complemental strand, 1807 - 1774
Alignment:
Q  157 gaggagcaaactccaaggtctcaagccaacacca 190  Q
    |||||||||||||||||||| |||||||||||||    
T  1807 gaggagcaaactccaaggtcccaagccaacacca 1774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 198
Target Start/End: Original strand, 24834 - 24903
Alignment:
Q  130 cagggagaatcaaacctgagacattgag-aggagcaaactccaaggtctcaagccaacaccaacaggcca 198  Q
    |||||| |||| || ||||||| ||||| ||||||||||||||||| | |||| |||||||| |||||||    
T  24834 cagggacaatcgaatctgagaccttgaggaggagcaaactccaaggccccaagtcaacaccaccaggcca 24903  T

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Target: scaffold0140 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 29505 - 29566
Alignment:
Q  129 acagggagaatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacacca 190  Q
    |||| ||||||||||| |||||| ||||||| | || ||||||| ||||||||| |||||||    
T  29505 acagagagaatcaaacatgagactttgagagaaacacactccaaagtctcaagcgaacacca 29566  T

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Target: scaffold0065 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 190
Target Start/End: Complemental strand, 12243 - 12210
Alignment:
Q  157 gaggagcaaactccaaggtctcaagccaacacca 190  Q
    |||||||||||||||||||| |||||||||||||    
T  12243 gaggagcaaactccaaggtcccaagccaacacca 12210  T

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Target: scaffold0012 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 240887 - 240940
Alignment:
Q  137 aatcaaacctgagacattgagaggagcaaactccaaggtctcaagccaacacca 190  Q
    |||||||| |||||| |||||||||||| |||||||| || ||| |||||||||    
T  240887 aatcaaacatgagaccttgagaggagcatactccaagatcccaaaccaacacca 240940  T

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