View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7376_low_8 (Length: 401)

Name: NF7376_low_8
Description: NF7376
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7376_low_8
NF7376_low_8
[»] chr4 (21 HSPs)
chr4 (264-396)||(47729973-47730105)
chr4 (79-252)||(12473705-12473878)
chr4 (79-252)||(12528114-12528287)
chr4 (84-252)||(35869573-35869741)
chr4 (96-244)||(21260803-21260951)
chr4 (102-252)||(33249394-33249544)
chr4 (79-252)||(22343338-22343511)
chr4 (80-252)||(55590483-55590644)
chr4 (79-252)||(51811915-51812088)
chr4 (157-252)||(52012779-52012874)
chr4 (159-252)||(52910126-52910219)
chr4 (278-357)||(44629831-44629913)
chr4 (157-252)||(9799438-9799533)
chr4 (25-79)||(47730101-47730155)
chr4 (175-252)||(34829176-34829253)
chr4 (80-134)||(35781028-35781082)
chr4 (79-134)||(1796669-1796724)
chr4 (157-252)||(49999663-49999758)
chr4 (160-230)||(46719953-46720023)
chr4 (157-252)||(47943159-47943255)
chr4 (204-255)||(49998480-49998531)
[»] chr7 (9 HSPs)
chr7 (77-252)||(35341537-35341712)
chr7 (80-252)||(48250155-48250329)
chr7 (80-252)||(48072390-48072560)
chr7 (79-229)||(32694567-32694717)
chr7 (160-249)||(31306951-31307041)
chr7 (160-205)||(40856479-40856524)
chr7 (157-252)||(40893116-40893212)
chr7 (189-252)||(40856393-40856456)
chr7 (89-130)||(31306875-31306916)
[»] chr1 (14 HSPs)
chr1 (89-252)||(29119331-29119494)
chr1 (79-252)||(2569038-2569210)
chr1 (89-252)||(32676137-32676300)
chr1 (157-252)||(8809715-8809810)
chr1 (87-252)||(46435470-46435623)
chr1 (160-252)||(25161310-25161402)
chr1 (105-240)||(8462141-8462276)
chr1 (157-253)||(6223051-6223147)
chr1 (77-252)||(35998253-35998429)
chr1 (161-224)||(3688917-3688980)
chr1 (170-249)||(7214499-7214578)
chr1 (204-255)||(16679821-16679871)
chr1 (95-149)||(31932257-31932311)
chr1 (207-255)||(5581278-5581326)
[»] chr5 (17 HSPs)
chr5 (79-248)||(33858535-33858704)
chr5 (80-252)||(11607532-11607704)
chr5 (80-252)||(1826260-1826432)
chr5 (81-252)||(19357261-19357431)
chr5 (116-252)||(39570077-39570213)
chr5 (80-237)||(33271630-33271787)
chr5 (157-252)||(13015382-13015477)
chr5 (158-252)||(13086754-13086848)
chr5 (78-252)||(38010609-38010784)
chr5 (157-252)||(9827789-9827884)
chr5 (157-252)||(13478120-13478215)
chr5 (157-252)||(29989963-29990058)
chr5 (157-252)||(13421085-13421180)
chr5 (105-196)||(42148203-42148294)
chr5 (157-205)||(37881189-37881237)
chr5 (83-149)||(10292976-10293042)
chr5 (79-116)||(9827903-9827940)
[»] chr3 (17 HSPs)
chr3 (79-252)||(44380255-44380428)
chr3 (107-252)||(47426351-47426496)
chr3 (86-249)||(33509684-33509847)
chr3 (157-252)||(50934501-50934596)
chr3 (78-252)||(47186176-47186351)
chr3 (157-252)||(31187145-31187240)
chr3 (80-240)||(37742738-37742898)
chr3 (89-245)||(35094554-35094712)
chr3 (157-252)||(42664674-42664769)
chr3 (157-252)||(34029366-34029461)
chr3 (185-251)||(32319468-32319534)
chr3 (105-251)||(39498693-39498838)
chr3 (79-230)||(17466296-17466447)
chr3 (187-252)||(10179868-10179933)
chr3 (79-137)||(19619214-19619272)
chr3 (187-252)||(10018671-10018736)
chr3 (202-252)||(21963075-21963125)
[»] chr2 (9 HSPs)
chr2 (81-252)||(34392080-34392251)
chr2 (157-252)||(21603960-21604055)
chr2 (80-239)||(23863801-23863958)
chr2 (87-250)||(7381695-7381857)
chr2 (158-252)||(37357997-37358091)
chr2 (79-252)||(4775635-4775809)
chr2 (80-230)||(4779608-4779758)
chr2 (78-232)||(25275618-25275771)
chr2 (157-248)||(14565928-14566019)
[»] chr8 (9 HSPs)
chr8 (86-252)||(41179567-41179733)
chr8 (80-252)||(24337828-24338000)
chr8 (78-252)||(11254024-11254197)
chr8 (108-245)||(4708333-4708470)
chr8 (90-246)||(18168392-18168549)
chr8 (90-246)||(18631949-18632106)
chr8 (157-252)||(1514804-1514899)
chr8 (157-252)||(32825910-32826005)
chr8 (227-255)||(23422450-23422478)
[»] chr6 (7 HSPs)
chr6 (80-252)||(1211842-1212014)
chr6 (79-252)||(5403873-5404046)
chr6 (157-252)||(34245568-34245663)
chr6 (178-252)||(11113557-11113631)
chr6 (188-252)||(11753168-11753232)
chr6 (80-248)||(32644836-32645002)
chr6 (80-126)||(10503257-10503303)
[»] scaffold0229 (1 HSPs)
scaffold0229 (79-252)||(13002-13176)
[»] scaffold0519 (1 HSPs)
scaffold0519 (78-252)||(11196-11369)
[»] scaffold0032 (1 HSPs)
scaffold0032 (157-252)||(34195-34290)
[»] scaffold0263 (2 HSPs)
scaffold0263 (157-252)||(23174-23263)
scaffold0263 (204-252)||(23094-23142)
[»] scaffold0041 (1 HSPs)
scaffold0041 (157-252)||(73072-73168)


Alignment Details
Target: chr4 (Bit Score: 121; Significance: 7e-62; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 264 - 396
Target Start/End: Complemental strand, 47730105 - 47729973
Alignment:
Q  264 acttcatttacatgaccttaattactcctaacatatataattaaatatcatgaaggcaaatattcattcaacctgcaactctgaaactgtcatacatgga 363  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47730105 acttcatttacattaccttaattactcctaacatatataattaaatatcatgaaggcaaatattcattcaacctgcaactctgaaactgtcatacatgga 47730006  T
Q  364 ggccttaagatgtttcacaacttctctgctact 396  Q
    |||||||||||||||||||||||| ||| ||||    
T  47730005 ggccttaagatgtttcacaacttcactgttact 47729973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 79 - 252
Target Start/End: Complemental strand, 12473878 - 12473705
Alignment:
Q  79 cggataacacttgtgtaccataatgatatatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnntatatcaaataaaatatctata 178  Q
    |||||| |||||||||||||||||| ||||||| ||||| ||||||||||||| |||||  ||||||||||       |||||||||||||  |||||||    
T  12473878 cggatagcacttgtgtaccataatggtatataccattgctcaattagaatgtgtcatgtgccacaccctttaaaaaaatatatcaaataaagcatctata 12473779  T
Q  179 aagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    |||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  12473778 aagtaacattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtatacaagtg 12473705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 79 - 252
Target Start/End: Complemental strand, 12528287 - 12528114
Alignment:
Q  79 cggataacacttgtgtaccataatgatatatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnntatatcaaataaaatatctata 178  Q
    |||||| |||||||||||||||||| ||||||| ||||| ||||||||||||| |||||  ||||||||||       |||||||||||||  |||||||    
T  12528287 cggatagcacttgtgtaccataatggtatataccattgctcaattagaatgtgtcatgtgccacaccctttaaaaaaatatatcaaataaagcatctata 12528188  T
Q  179 aagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    |||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  12528187 aagtaacattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtatacaagtg 12528114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 84 - 252
Target Start/End: Original strand, 35869573 - 35869741
Alignment:
Q  84 aacacttgtgtaccataatgatatatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnntatatcaaataaaatatctataaagta 183  Q
    ||||||||| |||||||||| ||||||| ||||  ||||||||||||| || || |||||||||||       |||||||||||||| || |||| ||||    
T  35869573 aacacttgtctaccataatggtatataccattgttcaattagaatgtgtcacgtggcacaccctttaaaaaagtatatcaaataaaacatttatatagta 35869672  T
Q  184 acattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    ||||||||||||| |||  | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  35869673 acattggtaggtggcacattataattggtcaatggtatataccattggtaccttaatggtacacaagtg 35869741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 96 - 244
Target Start/End: Complemental strand, 21260951 - 21260803
Alignment:
Q  96 ccataatgatatatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnntatatcaaataaaatatctataaagtaacattggtaggt 195  Q
    |||||||| ||||||  ||| ||||||||||||||||||||| |||||||||||       |||||||||||||| || |||||||||||||||||||||    
T  21260951 ccataatggtatataacattacccaattagaatgtgccatgtggcacaccctttaaaaaaatatatcaaataaaacatttataaagtaacattggtaggt 21260852  T
Q  196 gacacgctctaattggtcaatggtatataccattggtaccttaatggta 244  Q
    ||||| |||||||||| ||||| |||||| |||||||||||||||||||    
T  21260851 gacacactctaattggccaatgatatatatcattggtaccttaatggta 21260803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 102 - 252
Target Start/End: Original strand, 33249394 - 33249544
Alignment:
Q  102 tgatatatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnntatatcaaataaaatatctataaagtaacattggtaggtgacacg 201  Q
    |||||||||  ||||| |||||||| |||||||||| |||||||||||       |||||||||||||  || ||||||||||||||||||||||||||     
T  33249394 tgatatatatcattgctcaattagattgtgccatgtggcacaccctttaaaaatatatatcaaataaagcatttataaagtaacattggtaggtgacaca 33249493  T
Q  202 ctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    |||||||||| |||| |||||||||||| ||||||||||||||||||||||    
T  33249494 ctctaattggccaattgtatataccatttgtaccttaatggtacacaagtg 33249544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 79 - 252
Target Start/End: Complemental strand, 22343511 - 22343338
Alignment:
Q  79 cggataacacttgtgtaccataatgatatatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnntatatcaaataaaatatctata 178  Q
    |||||| ||| |||||||||||||| ||||||  ||||  ||||||||||||| ||||| ||||| |||||       |||||||||||||  || ||||    
T  22343511 cggatatcacctgtgtaccataatggtatatatcattgttcaattagaatgtgtcatgtggcacatcctttaaaataatatatcaaataaagcatttata 22343412  T
Q  179 aagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    ||||||||||| ||| |||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  22343411 aagtaacattgatagatgacacactctaattggtcaatgatatataccattgataccttaatggtacacaagtg 22343338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 80 - 252
Target Start/End: Complemental strand, 55590644 - 55590483
Alignment:
Q  80 ggataacacttgtgtaccataatgatatatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnntatatcaaataaaatatctataa 179  Q
    ||||| |||||| ||||||||||| ||||| | ||||||||||||||||||| || || ||||| |||||       |||||||||||||              
T  55590644 ggatagcacttgcgtaccataatggtatattccattgcccaattagaatgtgtcacgtggcacatcctttaaaaaagtatatcaaataaa---------- 55590555  T
Q  180 agtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
     |||||||||||||||||||| || |||||| |||||| ||||||||||||||||||||||||||||||||||    
T  55590554 -gtaacattggtaggtgacacactataattgatcaatgatatataccattggtaccttaatggtacacaagtg 55590483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 79 - 252
Target Start/End: Complemental strand, 51812088 - 51811915
Alignment:
Q  79 cggataacacttgtgtaccataatgatatatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnntatatcaaataaaatatctata 178  Q
    |||||||||||||| || ||||||| ||||||| |||  |||||||||||||| ||  | |||||||||||       ||||||||| |||| || ||||    
T  51812088 cggataacacttgtatatcataatggtatataccattatccaattagaatgtgtcacatggcacaccctttaaaaaaatatatcaaaaaaaaaatttata 51811989  T
Q  179 aagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    |||||||||||||||||| ||  |||||||||| ||||  |||||| | ||| |||||||||||||||| ||||    
T  51811988 aagtaacattggtaggtggcatactctaattggccaataatatatatctttgataccttaatggtacacgagtg 51811915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 52012874 - 52012779
Alignment:
Q  157 tatatcaaataaaatatctataaagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    |||||||||||||| || |||||||||||||||||| ||| ||| || | ||||||||||| |||||| |||||||||||||||||||||||||||    
T  52012874 tatatcaaataaaacatttataaagtaacattggtatgtggcacacttttattggtcaatgttatataacattggtaccttaatggtacacaagtg 52012779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 159 - 252
Target Start/End: Original strand, 52910126 - 52910219
Alignment:
Q  159 tatcaaataaaatatctataaagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    |||||||||||  || |||||||||| ||||||||||| ||| || ||||||| |||||||||||| |||||||||| | ||||||||||||||    
T  52910126 tatcaaataaagcatttataaagtaatattggtaggtggcacactttaattggccaatggtatataacattggtaccattatggtacacaagtg 52910219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 278 - 357
Target Start/End: Complemental strand, 44629913 - 44629831
Alignment:
Q  278 accttaattactcctaacatatataattaaatatcatgaaggcaaatattc---attcaacctgcaactctgaaactgtcata 357  Q
    |||||||||| ||||||||||| ||||| ||||| |||||| |||||||||   |||||||||||||||||||||||||||||    
T  44629913 accttaattagtcctaacatatgtaatttaatatgatgaagacaaatattcttcattcaacctgcaactctgaaactgtcata 44629831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 9799438 - 9799533
Alignment:
Q  157 tatatcaaataaaatatctataaagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    ||||| |||||||| || |||||||||||||||||| ||| |||  |||  |||||||||| |||||| ||||||||||||||||||| |||||||    
T  9799438 tatattaaataaaacatttataaagtaacattggtatgtggcacattcttgttggtcaatgttatataacattggtaccttaatggtatacaagtg 9799533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 47730155 - 47730101
Alignment:
Q  25 aatagtcttggaataacttaggtctgcaactttttagacatgctcacatgacttc 79  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  47730155 aatagtcttagaataacttaggtctgcaacttcttagacatgctcacatgacttc 47730101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 175 - 252
Target Start/End: Original strand, 34829176 - 34829253
Alignment:
Q  175 tataaagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    |||||||||||||||||||||||||| || ||||||| || || |||||| ||||||||||||||| ||||| |||||    
T  34829176 tataaagtaacattggtaggtgacacactttaattggccattgatatatatcattggtaccttaatagtacataagtg 34829253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 35781082 - 35781028
Alignment:
Q  80 ggataacacttgtgtaccataatgatatatactattgcccaattagaatgtgcca 134  Q
    ||||| |||||| ||||||||||| ||||||| ||||||||||||||||||||||    
T  35781082 ggatatcacttgcgtaccataatggtatataccattgcccaattagaatgtgcca 35781028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 79 - 134
Target Start/End: Complemental strand, 1796724 - 1796669
Alignment:
Q  79 cggataacacttgtgtaccataatgatatatactattgcccaattagaatgtgcca 134  Q
    ||||||||||||||||||||||||| ||||||| |||| ||||||| | |||||||    
T  1796724 cggataacacttgtgtaccataatggtatataccattgtccaattaaattgtgcca 1796669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 49999663 - 49999758
Alignment:
Q  157 tatatcaaataaaatatctataaagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    |||||||||||||  || |||||| ||||||||||| ||||||| |||||||||  |||||  | ||| |||| ||| ||| ||||||||||||||    
T  49999663 tatatcaaataaagcatttataaaataacattggtatgtgacacactctaattgaccaatgacacataacattagtatcttgatggtacacaagtg 49999758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 230
Target Start/End: Complemental strand, 46720023 - 46719953
Alignment:
Q  160 atcaaataaaatatctataaagtaacattggtaggtgacacgctctaattggtcaatggtatataccattg 230  Q
    |||||||||| ||| |||||||||||||| ||| ||| ||| |||| ||||||||||| |||||| |||||    
T  46720023 atcaaataaagtatttataaagtaacatttgtatgtggcacactcttattggtcaatgttatataacattg 46719953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 47943255 - 47943159
Alignment:
Q  157 tatatcaaataaaatatctataaagtaacattggtaggtgacacgctctaattggtc-aatggtatataccattggtaccttaatggtacacaagtg 252  Q
    ||||||||||||||||| |||||| ||| ||||||| ||| |||  | | ||||||| |||  |||||| ||||||||  |||||||||||||||||    
T  47943255 tatatcaaataaaatatttataaaataatattggtatgtggcacatttttattggtcaaatattatataacattggtattttaatggtacacaagtg 47943159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 204 - 255
Target Start/End: Complemental strand, 49998531 - 49998480
Alignment:
Q  204 ctaattggtcaatggtatataccattggtaccttaatggtacacaagtgcta 255  Q
    |||||||| ||||| ||||||  ||||||||||||||||||||||| |||||    
T  49998531 ctaattggccaatgatatataatattggtaccttaatggtacacaaatgcta 49998480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 99; Significance: 9e-49; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 77 - 252
Target Start/End: Complemental strand, 35341712 - 35341537
Alignment:
Q  77 ttcggataacacttgtgtaccataatgatatatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnntatatcaaataaaatatcta 176  Q
    |||||||||||||| | |||||||||||||||||  |||| |||||||||||||| || || |||||||||||       |||||||||||||| || ||    
T  35341712 ttcggataacacttatctaccataatgatatatatcattgtccaattagaatgtgtcacgtggcacaccctttaaaaaagtatatcaaataaaacattta 35341613  T
Q  177 taaagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    |||||||||||||||||||| ||| || |||||||||||||||||||| |||||||||||||||||||||||||||    
T  35341612 taaagtaacattggtaggtggcacactataattggtcaatggtatatatcattggtaccttaatggtacacaagtg 35341537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 80 - 252
Target Start/End: Complemental strand, 48250329 - 48250155
Alignment:
Q  80 ggataacacttgtgtaccataatgatatatactattgcccaattagaatgtgcca--tgttgcacaccctttnnnnnnntatatcaaataaaatatctat 177  Q
    ||||| |||||||||||||||||| ||||||| |||| |||||||||||||| ||  ||| ||| |||||||        ||||||||||||  ||||||    
T  48250329 ggatagcacttgtgtaccataatggtatataccattgtccaattagaatgtgacacatgtagcataccctttaaaaaaaaatatcaaataaagcatctat 48250230  T
Q  178 aaagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    ||||||||||||||||||| ||| |||||||||  ||||| |||||| |||||||||||||||||||||||||||    
T  48250229 aaagtaacattggtaggtggcacactctaattgaccaatgatatatatcattggtaccttaatggtacacaagtg 48250155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 80 - 252
Target Start/End: Complemental strand, 48072560 - 48072390
Alignment:
Q  80 ggataacacttgtgtaccataatgatatatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnntatatcaaataaaatatctataa 179  Q
    ||||| |||||||||||||||||| ||||||| |||||||||||||||||||||| || |||||||||||       || |||||||||||||| |||||    
T  48072560 ggatagcacttgtgtaccataatggtatataccattgcccaattagaatgtgccacgtggcacaccctttaaaaaaatacatcaaataaaatatttataa 48072461  T
Q  180 agtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    | ||||||||  | ||| ||| ||||||||| |||||||  ||||| |||||||||||||| |||||||||||    
T  48072460 aataacattgaaatgtggcacactctaattgatcaatgg--tatactattggtaccttaatagtacacaagtg 48072390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 79 - 229
Target Start/End: Original strand, 32694567 - 32694717
Alignment:
Q  79 cggataacacttgtgtaccataatgatatatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnntatatcaaataaaatatctata 178  Q
    |||||| ||||||||||| |||||| ||||||| |||||| |||||||||||| || || |||||||||||       |||||||||||||  || ||||    
T  32694567 cggatagcacttgtgtactataatggtatataccattgcctaattagaatgtgtcacgtggcacaccctttaaaaaaatatatcaaataaagaatttata 32694666  T
Q  179 aagtaacattggtaggtgacacgctctaattggtcaatggtatataccatt 229  Q
    ||||||||||| ||| ||  || ||||||||   |||||||||||| ||||    
T  32694667 aagtaacattgatagatgggacactctaatttaccaatggtatatatcatt 32694717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 249
Target Start/End: Original strand, 31306951 - 31307041
Alignment:
Q  160 atcaaataaaatatctataaagtaacattggtaggtgacacgctct-aattggtcaatggtatataccattggtaccttaatggtacacaa 249  Q
    ||||||||||  || |||||||||||||||||||||  ||| || | |||||| ||||| |||||| ||||| ||| ||||||||||||||    
T  31306951 atcaaataaagcatttataaagtaacattggtaggtagcacactttaaattggacaatgatatatatcattgatactttaatggtacacaa 31307041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 40856524 - 40856479
Alignment:
Q  160 atcaaataaaatatctataaagtaacattggtaggtgacacgctct 205  Q
    ||||||||||| ||||||||| ||||||||||||||||||| ||||    
T  40856524 atcaaataaaacatctataaaataacattggtaggtgacacactct 40856479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 40893116 - 40893212
Alignment:
Q  157 tatatcaaataaaat-atctataaagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    ||||||||||||||  || ||||||||||||||| ||| ||| ||  ||||||||  |||||||||||||||||  ||| || |||||| |||||||    
T  40893116 tatatcaaataaaagcatttataaagtaacattgatagatgagacattctaattgaccaatggtatataccattaatactttgatggtatacaagtg 40893212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 189 - 252
Target Start/End: Complemental strand, 40856456 - 40856393
Alignment:
Q  189 ggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    |||||||||||| ||||||||| |||||  |||||| |||| ||||||||||| |||| |||||    
T  40856456 ggtaggtgacacactctaattgatcaataatatatatcattagtaccttaatgatacataagtg 40856393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 130
Target Start/End: Original strand, 31306875 - 31306916
Alignment:
Q  89 ttgtgtaccataatgatatatactattgcccaattagaatgt 130  Q
    ||||||||||||||||||||||  |||| |||||||||||||    
T  31306875 ttgtgtaccataatgatatatatcattgtccaattagaatgt 31306916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 99; Significance: 9e-49; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 89 - 252
Target Start/End: Original strand, 29119331 - 29119494
Alignment:
Q  89 ttgtgtaccataatgatatatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnntatatcaaataaaatatctataaagtaacatt 188  Q
    ||||||||||||| | ||||||| ||||||||||||||||||||||||| |||||||||||       |||||||||||||  ||||||||||||||| |    
T  29119331 ttgtgtaccataagggtatatacaattgcccaattagaatgtgccatgtggcacaccctttaaaaaaatatatcaaataaagcatctataaagtaacaat 29119430  T
Q  189 ggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    | |||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  29119431 gataggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtg 29119494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 79 - 252
Target Start/End: Complemental strand, 2569210 - 2569038
Alignment:
Q  79 cggataacacttgtgtaccataatgatatatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnntatatcaaataaaatatctata 178  Q
    |||||| |||||||||| |||||||||||||||||||||| |||||||||||||||  | |||||||||||       |||||||||||||  ||   ||    
T  2569210 cggatagcacttgtgtaacataatgatatatactattgcctaattagaatgtgccacatggcacaccctttaaaaaa-tatatcaaataaagcattggta 2569112  T
Q  179 aagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    | |||||||||||||||| ||| ||||||||||  |||| ||||||||||||||||||||||||||||||||||    
T  2569111 atgtaacattggtaggtggcacactctaattggcaaatgatatataccattggtaccttaatggtacacaagtg 2569038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 89 - 252
Target Start/End: Complemental strand, 32676300 - 32676137
Alignment:
Q  89 ttgtgtaccataatgatatatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnntatatcaaataaaatatctataaagtaacatt 188  Q
    |||||||| |||||| ||||||| |||| ||||||||| |||||||||| |||||  ||||       |||||||||||||  || ||||||||||||||    
T  32676300 ttgtgtactataatggtatataccattgtccaattagattgtgccatgtggcacatgctttaaaaaaatatatcaaataaagcatttataaagtaacatt 32676201  T
Q  189 ggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    ||||||||   |  ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  32676200 ggtaggtggtgcattctaattggccaatggtatataccattggtaccttaatggtacacaagtg 32676137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 8809715 - 8809810
Alignment:
Q  157 tatatcaaataaaatatctataaagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    |||||||||||||| || |||||||||||||||||| ||| ||| |||| ||||||||||| |||||| |||||||||||||||||||||||||||    
T  8809715 tatatcaaataaaacatttataaagtaacattggtacgtggcacactcttattggtcaatgttatataacattggtaccttaatggtacacaagtg 8809810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 87 - 252
Target Start/End: Original strand, 46435470 - 46435623
Alignment:
Q  87 acttgtgtaccataatgatatatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnntatatcaaataaaatatctataaagtaaca 186  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||| |||||  ||||||||||       |||||||||||||  ||||||||           
T  46435470 acttgtgtaccataatggtatataccattgcccaattagaatgtgtcatgtgacacaccctttaaaaatatatatcaaataaagcatctataa------- 46435562  T
Q  187 ttggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
         ||||||| | |||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  46435563 -----aggtgacgcactctaattggccaattgtatataccattggtaccttaatggtacacaagtg 46435623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 160 - 252
Target Start/End: Complemental strand, 25161402 - 25161310
Alignment:
Q  160 atcaaataaaatatctataaagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    ||||||||||| || ||||||||||||||| |||||| ||| || ||||||||||||||||||||||||||  || |||||||||||||||||    
T  25161402 atcaaataaaacatttataaagtaacattgttaggtggcacactgtaattggtcaatggtatataccattgagactttaatggtacacaagtg 25161310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 105 - 240
Target Start/End: Complemental strand, 8462276 - 8462141
Alignment:
Q  105 tatatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnntatatcaaataaaatatctataaagtaacattggtaggtgacacgctc 204  Q
    ||||||| |||| ||||||| |||||| || || |||| ||||||       ||||| |||||||| || |||||| ||||||||||||||| ||| ||     
T  8462276 tatataccattgtccaattaaaatgtgtcacgtggcacgccctttaaaaaagtatattaaataaaacatttataaaataacattggtaggtggcacacta 8462177  T
Q  205 taattggtcaatggtatataccattggtaccttaat 240  Q
    |||||| |||||| |||||||||||||||| |||||    
T  8462176 taattgatcaatgatatataccattggtactttaat 8462141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 157 - 253
Target Start/End: Complemental strand, 6223147 - 6223051
Alignment:
Q  157 tatatcaaataaaatatctataaagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtgc 253  Q
    ||||||||||||||||  |||||| |||||||| ||  |||||| |  |||||| |||||| |||||| ||||| ||| ||||||||||||||||||    
T  6223147 tatatcaaataaaatacttataaaataacattgatatatgacacaccttaattgatcaatgatatataacattgatactttaatggtacacaagtgc 6223051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 77 - 252
Target Start/End: Complemental strand, 35998429 - 35998253
Alignment:
Q  77 ttcggataacacttgtgtaccataatgatatatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnn-tatatcaaataaaatatct 175  Q
    |||||||| ||| |||||||||| ||| ||||||  |||  |||||||  ||||||||||| |||||| ||||        ||||| |||||||| |  |    
T  35998429 ttcggatagcacctgtgtaccattatgttatataacattagccaattaagatgtgccatgtggcacacactttaaaaaacatatataaaataaaacactt 35998330  T
Q  176 ataaagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    ||||| |||||||| || ||| ||| |||| |||  |||||| |||||| ||||||||||||||||||| |||||||    
T  35998329 ataaaataacattgatatgtggcacactcttattaatcaatgttatataacattggtaccttaatggtatacaagtg 35998253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 161 - 224
Target Start/End: Original strand, 3688917 - 3688980
Alignment:
Q  161 tcaaataaaatatctataaagtaacattggtaggtgacacgctctaattggtcaatggtatata 224  Q
    |||||||||| || |||||||||||||||||||||   || |||||||||||||||| ||||||    
T  3688917 tcaaataaaacatttataaagtaacattggtaggttgtacactctaattggtcaatgatatata 3688980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 170 - 249
Target Start/End: Original strand, 7214499 - 7214578
Alignment:
Q  170 atatctataaagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaa 249  Q
    |||| |||||||||| || | |||||||||| |||||||||  ||||  ||||||| ||| |||||||||||||||||||    
T  7214499 atatttataaagtaatatcgataggtgacacactctaattgaccaataatatatactattagtaccttaatggtacacaa 7214578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 204 - 255
Target Start/End: Original strand, 16679821 - 16679871
Alignment:
Q  204 ctaattggtcaatggtatataccattggtaccttaatggtacacaagtgcta 255  Q
    |||||||| |||| ||||||| ||||||||||||||||||||||||||||||    
T  16679821 ctaattgg-caatagtatataacattggtaccttaatggtacacaagtgcta 16679871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 95 - 149
Target Start/End: Complemental strand, 31932311 - 31932257
Alignment:
Q  95 accataatgatatatactattgcccaattagaatgtgccatgttgcacacccttt 149  Q
    ||||||||| ||||||||||| | |||||||||||||||| || ||||| |||||    
T  31932311 accataatggtatatactattacacaattagaatgtgccacgtagcacatccttt 31932257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 5581326 - 5581278
Alignment:
Q  207 attggtcaatggtatataccattggtaccttaatggtacacaagtgcta 255  Q
    ||||||||||| |||||| |||| ||| | |||||||||||||||||||    
T  5581326 attggtcaatgttatataacattagtatcctaatggtacacaagtgcta 5581278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 97; Significance: 1e-47; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 79 - 248
Target Start/End: Original strand, 33858535 - 33858704
Alignment:
Q  79 cggataacacttgtgtaccataatgatatatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnntatatcaaataaaatatctata 178  Q
    |||||| |||||||||||||||||| ||||||| ||||||||||||||||||| || || |||||||||||       |||||||||||||| || ||||    
T  33858535 cggatagcacttgtgtaccataatggtatataccattgcccaattagaatgtgtcacgtggcacaccctttaaaaaagtatatcaaataaaacatttata 33858634  T
Q  179 aagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacaca 248  Q
    |||||||||||||||||| ||| || ||||||||||||| ||||||| ||||||||||||||||||||||    
T  33858635 aagtaacattggtaggtggcacactataattggtcaatgatatatactattggtaccttaatggtacaca 33858704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 80 - 252
Target Start/End: Original strand, 11607532 - 11607704
Alignment:
Q  80 ggataacacttgtgtaccataatgatatatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnntatatcaaataaaatatctataa 179  Q
    ||||| |||||||||||||||||||||||||| |||| |||||||||||||| |  || |||||||||||       |||||||||||||| || |||||    
T  11607532 ggatagcacttgtgtaccataatgatatataccattgtccaattagaatgtggcccgtggcacaccctttaaaaaagtatatcaaataaaacatttataa 11607631  T
Q  180 agtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    ||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||| |||||||    
T  11607632 agtaatattggtaggtggcacactataattggtcaatggtatataccattggtaccttaatggtatacaagtg 11607704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 80 - 252
Target Start/End: Complemental strand, 1826432 - 1826260
Alignment:
Q  80 ggataacacttgtgtaccataatgatatatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnntatatcaaataaaatatctataa 179  Q
    ||||| |||||||||| ||||||||||||||  ||||  |||||| |||||||||||| |||||  ||||       |||||||||||||  ||||| ||    
T  1826432 ggatatcacttgtgtatcataatgatatatatcattgttcaattaaaatgtgccatgtggcacatactttaaaaaaatatatcaaataaagcatctacaa 1826333  T
Q  180 agtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    ||||| ||||||||||||||| |||||||||  |||||||||||||||||||||| |||||||||||||||||    
T  1826332 agtaatattggtaggtgacacactctaattgaccaatggtatataccattggtactttaatggtacacaagtg 1826260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 81 - 252
Target Start/End: Original strand, 19357261 - 19357431
Alignment:
Q  81 gataacacttgtgtaccataatgatatatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnntatatcaaataaaatatctataaa 180  Q
    |||| |||||||||||||||||| ||||||  |||| |||||||||||||| || || | ||| |||||       |||||||||||||  || ||||||    
T  19357261 gatagcacttgtgtaccataatggtatatatcattgtccaattagaatgtgtcacgtgggacatcctttaaaaaa-tatatcaaataaagcatttataaa 19357359  T
Q  181 gtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    |||| ||||||||||| ||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  19357360 gtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccctaatggtacacaagtg 19357431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 116 - 252
Target Start/End: Original strand, 39570077 - 39570213
Alignment:
Q  116 gcccaattagaatgtgccatgttgcacaccctttnnnnnnntatatcaaataaaatatctataaagtaacattggtaggtgacacgctctaattggtcaa 215  Q
    ||||||||||||| || || || |||||||||||       |||||||||||||| || |||||||||||||||||||||||||| |||||||||| |||    
T  39570077 gcccaattagaatatgtcaggtggcacaccctttaaaaaagtatatcaaataaaacatttataaagtaacattggtaggtgacacactctaattggccaa 39570176  T
Q  216 tggtatataccattggtaccttaatggtacacaagtg 252  Q
    ||||||||||||||| ||| |||||| ||||||||||    
T  39570177 tggtatataccattgatactttaatgatacacaagtg 39570213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 33271787 - 33271630
Alignment:
Q  80 ggataacacttgtgtaccataatgatatatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnntatatcaaataaaatatctataa 179  Q
    ||||| ||||| |||||||||||| |||||||||||||||||||||||||||||| || || || |||||       |||||||||||||  || ||| |    
T  33271787 ggatagcacttatgtaccataatggtatatactattgcccaattagaatgtgccacgtggcgcatcctttaaaaaaatatatcaaataaagcatttatca 33271688  T
Q  180 agtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtacctt 237  Q
    |||||||||| ||| |||||| |||||||||| ||||| |||||| ||||||||||||    
T  33271687 agtaacattgatagatgacacactctaattggccaatgatatatatcattggtacctt 33271630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 13015477 - 13015382
Alignment:
Q  157 tatatcaaataaaatatctataaagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    ||||||||||||||||| |||||||||||||||||| ||| ||| |||| ||||||||||| |||||| |||||||||||||||||||||||||||    
T  13015477 tatatcaaataaaatatttataaagtaacattggtatgtggcacactcttattggtcaatgttatataacattggtaccttaatggtacacaagtg 13015382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 158 - 252
Target Start/End: Complemental strand, 13086848 - 13086754
Alignment:
Q  158 atatcaaataaaatatctataaagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    |||||||||||||||| |||||| ||||||||||| ||| ||| |||| ||||||||||| |||||| |||||||||||||||||||||||||||    
T  13086848 atatcaaataaaatatttataaaataacattggtatgtggcacactcttattggtcaatgttatataacattggtaccttaatggtacacaagtg 13086754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 78 - 252
Target Start/End: Original strand, 38010609 - 38010784
Alignment:
Q  78 tcggataacacttgtgtaccataatgatatatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnn-tatatcaaataaaatatcta 176  Q
    ||||||| |||||||||||||| ||| ||||||  |||  |||||||   |||||||||| |||||| ||||        ||||||||||||| ||| ||    
T  38010609 tcggatagcacttgtgtaccattatgttatataacattagccaattaaggtgtgccatgtggcacacactttaaaaaacatatatcaaataaagtattta 38010708  T
Q  177 taaagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    |||||||||||||||| ||| ||| |||| ||||| ||||| |||||| |||||||||||||||||||||||||||    
T  38010709 taaagtaacattggtatgtggcacactcttattggccaatgttatataacattggtaccttaatggtacacaagtg 38010784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 9827884 - 9827789
Alignment:
Q  157 tatatcaaataaaatatctataaagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    ||||||||||||||||| |||||||||| |||||||||||  || |||||||||   || ||||||||||||||||||||||||||||||||||||    
T  9827884 tatatcaaataaaatatttataaagtaatattggtaggtggtacactctaattgactaaaggtatataccattggtaccttaatggtacacaagtg 9827789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 13478120 - 13478215
Alignment:
Q  157 tatatcaaataaaatatctataaagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    ||||||||||||||||| |||||||||||| ||||| ||| ||| |||| ||||||||||| |||||| ||||||| |||||||||||||||||||    
T  13478120 tatatcaaataaaatatttataaagtaacaatggtatgtggcacactcttattggtcaatgttatataacattggttccttaatggtacacaagtg 13478215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 29990058 - 29989963
Alignment:
Q  157 tatatcaaataaaatatctataaagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    |||||||||||||| || |||||||||||||||||| ||| ||| |||| ||||||||||| |||||| ||||| |||||||||||||||||||||    
T  29990058 tatatcaaataaaacatttataaagtaacattggtatgtggcacactcttattggtcaatgttatataacattgataccttaatggtacacaagtg 29989963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 13421085 - 13421180
Alignment:
Q  157 tatatcaaataaaatatctataaagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    ||||| |||||||  || ||||||||||||||| ||  ||| || |||| |||| |||||| |||||| ||||| |||||||||||||||||||||    
T  13421085 tatattaaataaagcatttataaagtaacattgatatttgatacactcttattgatcaatgttatataacattgataccttaatggtacacaagtg 13421180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 196
Target Start/End: Complemental strand, 42148294 - 42148203
Alignment:
Q  105 tatatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnntatatcaaataaaatatctataaagtaacattggtaggtg 196  Q
    ||||||| ||||  |||||||||||||| | || | |||||||||       |||||||||||||| || ||||||||||||||||||||||    
T  42148294 tatataccattgttcaattagaatgtgcaacgtggtacaccctttaaaaaaatatatcaaataaaacatttataaagtaacattggtaggtg 42148203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 205
Target Start/End: Complemental strand, 37881237 - 37881189
Alignment:
Q  157 tatatcaaataaaatatctataaagtaacattggtaggtgacacgctct 205  Q
    ||||||||||||||||| |||||||||||||||||| ||| ||| ||||    
T  37881237 tatatcaaataaaatatttataaagtaacattggtatgtggcacactct 37881189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 149
Target Start/End: Complemental strand, 10293042 - 10292976
Alignment:
Q  83 taacacttgtgtaccataatgatatatactattgcccaattagaatgtgccatgttgcacacccttt 149  Q
    ||||||||||||||||||||| ||||||  |||| |||||||   ||||||| || |||||||||||    
T  10293042 taacacttgtgtaccataatgttatataacattggccaattaaggtgtgccacgtggcacacccttt 10292976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 116
Target Start/End: Complemental strand, 9827940 - 9827903
Alignment:
Q  79 cggataacacttgtgtaccataatgatatatactattg 116  Q
    ||||||||||||||||||||||||| ||||||| ||||    
T  9827940 cggataacacttgtgtaccataatggtatataccattg 9827903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 97; Significance: 1e-47; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 79 - 252
Target Start/End: Complemental strand, 44380428 - 44380255
Alignment:
Q  79 cggataacacttgtgtaccataatgatatatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnntatatcaaataaaatatctata 178  Q
    ||||||||||||||||||||||||| ||||||| |||| |||||||||||||| || || |||||||||||       |||||||||||||  || ||||    
T  44380428 cggataacacttgtgtaccataatggtatataccattgtccaattagaatgtgtcacgtggcacaccctttaaaaaagtatatcaaataaagcatttata 44380329  T
Q  179 aagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    |||||| |||| |||||||||| || |||||||||||| |||||||||||||||||||||||||||||||||||    
T  44380328 aagtaatattgataggtgacacactataattggtcaatagtatataccattggtaccttaatggtacacaagtg 44380255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 107 - 252
Target Start/End: Complemental strand, 47426496 - 47426351
Alignment:
Q  107 tatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnntatatcaaataaaatatctataaagtaacattggtaggtgacacgctcta 206  Q
    ||||| |||||||||||||||||| |||||| |||||||||||       |||||||||||||  |||||||||||||||||| |||||||||| |||||    
T  47426496 tataccattgcccaattagaatgtaccatgtggcacaccctttaaaaaaatatatcaaataaagcatctataaagtaacattgataggtgacacactcta 47426397  T
Q  207 attggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||    
T  47426396 attggccaatggtatatactattggtaccttaatggtacacaagtg 47426351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 86 - 249
Target Start/End: Complemental strand, 33509847 - 33509684
Alignment:
Q  86 cacttgtgtaccataatgatatatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnntatatcaaataaaatatctataaagtaac 185  Q
    ||||||||||| |||||| ||||||  |||| | |||||||||||||||||| ||||| |||||       || ||||||||||  |||||||||||||     
T  33509847 cacttgtgtacaataatggtatatatcattgtctaattagaatgtgccatgtggcacatcctttaaaaaaatacatcaaataaagcatctataaagtaat 33509748  T
Q  186 attggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaa 249  Q
    ||||||||||| ||| |||||||||||||||| ||||||| ||| |||||||||||||||||||    
T  33509747 attggtaggtggcacactctaattggtcaatgatatatactattagtaccttaatggtacacaa 33509684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 50934596 - 50934501
Alignment:
Q  157 tatatcaaataaaatatctataaagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    ||||||||||||   || |||||||||||||||||| ||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  50934596 tatatcaaataatgcatttataaagtaacattggtaagtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtg 50934501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 78 - 252
Target Start/End: Complemental strand, 47186351 - 47186176
Alignment:
Q  78 tcggataacacttgtgtaccataatgatatatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnn-tatatcaaataaaatatcta 176  Q
    ||||||| |||||||||||||| ||| ||||||  |||  |||||||   |||||||||| |||||| ||||        ||||||||||||| ||| ||    
T  47186351 tcggatagcacttgtgtaccattatgttatataacattagccaattaaggtgtgccatgtggcacacactttaaaaaacatatatcaaataaagtattta 47186252  T
Q  177 taaagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    |||||||||||||||| ||| ||| |||| ||||| ||||| |||||| |||||||||||||||||||||||||||    
T  47186251 taaagtaacattggtatgtggcacactcttattggccaatgttatataacattggtaccttaatggtacacaagtg 47186176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 31187145 - 31187240
Alignment:
Q  157 tatatcaaataaaatatctataaagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    |||||||||||||| || |||||||||||||||||| ||| ||| |||| ||||||||||| |||||| ||||||||||||||||||||| |||||    
T  31187145 tatatcaaataaaacatttataaagtaacattggtatgtggcacactcttattggtcaatgttatataacattggtaccttaatggtacataagtg 31187240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 80 - 240
Target Start/End: Complemental strand, 37742898 - 37742738
Alignment:
Q  80 ggataacacttgtgtaccataatgatatatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnntatatcaaataaaatatctataa 179  Q
    ||||| |||||||||| ||||||| ||||||| |||||||||||| ||||||||| || |||||| ||||       |||||||||||||  ||   |||    
T  37742898 ggatagcacttgtgtaacataatggtatataccattgcccaattataatgtgccacgtggcacactctttaaaaaaatatatcaaataaagcattggtaa 37742799  T
Q  180 agtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaat 240  Q
     |||||||||||||||| ||  |||||||||  ||||| ||||||||||||||||||||||    
T  37742798 tgtaacattggtaggtggcatactctaattgaccaatgatatataccattggtaccttaat 37742738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 89 - 245
Target Start/End: Complemental strand, 35094712 - 35094554
Alignment:
Q  89 ttgtgtaccataatgatatatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnntatatcaaataaaatatctataaagtaacatt 188  Q
    ||||||||||||||| ||| ||  |||| |||||||||||||| || ||  |||| |||||       ||||||||||||||||| ||||||||||||||    
T  35094712 ttgtgtaccataatggtatgtatcattgtccaattagaatgtgtcacgtgacacatcctttaaaaaaatatatcaaataaaatatttataaagtaacatt 35094613  T
Q  189 ggtaggtg--acacgctctaattggtcaatggtatataccattggtaccttaatggtac 245  Q
    ||||||||  | || || ||||| ||||||||||||||||| |||||| ||||||||||    
T  35094612 ggtaggtggcatactctataattagtcaatggtatataccactggtactttaatggtac 35094554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 42664769 - 42664674
Alignment:
Q  157 tatatcaaataaaatatctataaagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    |||||||||||||| || |||||| ||||||||||| ||| ||| |||| ||||||||||| |||||| | |||||||||||||||||||||||||    
T  42664769 tatatcaaataaaacatttataaaataacattggtatgtggcacactcttattggtcaatgttatataactttggtaccttaatggtacacaagtg 42664674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 34029366 - 34029461
Alignment:
Q  157 tatatcaaataaaatatctataaagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    |||||||||||||| || |||||||||||||| ||| ||| ||| |||| |||| |||||| |||||| ||||||||||||||||||| |||||||    
T  34029366 tatatcaaataaaacatttataaagtaacattagtatgtggcacactcttattgatcaatgttatataacattggtaccttaatggtaaacaagtg 34029461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 185 - 251
Target Start/End: Original strand, 32319468 - 32319534
Alignment:
Q  185 cattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagt 251  Q
    |||| ||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  32319468 catttgtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagt 32319534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 105 - 251
Target Start/End: Original strand, 39498693 - 39498838
Alignment:
Q  105 tatatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnntatatcaaataaaatatctataaagtaacattggtaggtgacacgctc 204  Q
    ||||||||||||| ||||||||||||| || || ||||| |||||       ||||| ||||||||||| |||||| |||||| | |||||||||| ||     
T  39498693 tatatactattgctcaattagaatgtgtcacgtggcacatcctttaaaaat-tatattaaataaaatatttataaaataacatcgataggtgacacactt 39498791  T
Q  205 taattggtcaatggtatataccattggtaccttaatggtacacaagt 251  Q
    ||||||  ||||  |||||| ||||||||| ||||||||||||||||    
T  39498792 taattgaccaataatatatatcattggtactttaatggtacacaagt 39498838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 79 - 230
Target Start/End: Complemental strand, 17466447 - 17466296
Alignment:
Q  79 cggataacacttgtgtaccataatgatatatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnntatatcaaataaaatatctata 178  Q
    ||||||||| ||||||||| ||||| ||||||| ||||| || ||||| ||||  | || ||| |||||||       |||||||| ||||  || ||||    
T  17466447 cggataacatttgtgtaccgtaatggtatataccattgctcagttagattgtggtacgtggcataccctttaaaaaaatatatcaactaaatcatttata 17466348  T
Q  179 aagtaacattggtaggtgacacgctctaattggtcaatggtatataccattg 230  Q
    ||||||||||| |||||||||| |||||||||  ||||| ||||||||||||    
T  17466347 aagtaacattgataggtgacacactctaattgaccaatgatatataccattg 17466296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 10179868 - 10179933
Alignment:
Q  187 ttggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    |||||||||| ||| |||||||||  |||||||||||||||||||||| |||||||||||||||||    
T  10179868 ttggtaggtggcacactctaattgaccaatggtatataccattggtactttaatggtacacaagtg 10179933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 137
Target Start/End: Complemental strand, 19619272 - 19619214
Alignment:
Q  79 cggataacacttgtgtaccataatgatatatactattgcccaattagaatgtgccatgt 137  Q
    |||||| ||| |||||||||||||| ||||||| |||||||||||| |||||| |||||    
T  19619272 cggatagcacatgtgtaccataatggtatataccattgcccaattaaaatgtgtcatgt 19619214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 10018671 - 10018736
Alignment:
Q  187 ttggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    |||||||||| ||| || | ||||  |||||||||||| ||||||||| |||||||||||||||||    
T  10018671 ttggtaggtggcacacttttattgaccaatggtatataacattggtactttaatggtacacaagtg 10018736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 202 - 252
Target Start/End: Original strand, 21963075 - 21963125
Alignment:
Q  202 ctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    |||| ||||||||||| |||||| ||||| ||||||||||||||| |||||    
T  21963075 ctcttattggtcaatgttatataacattgataccttaatggtacataagtg 21963125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 95; Significance: 2e-46; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 81 - 252
Target Start/End: Original strand, 34392080 - 34392251
Alignment:
Q  81 gataacacttgtgtaccataatgatatatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnntatatcaaataaaatatctataaa 180  Q
    |||| |||||||||||||||||| ||||||| |||| ||||||||| |||||||||| |||||||||||       |||||||||||||  || ||||||    
T  34392080 gatagcacttgtgtaccataatggtatataccattgtccaattagattgtgccatgtggcacaccctttaaaaaaatatatcaaataaagcatttataaa 34392179  T
Q  181 gtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    |||| ||||||||||| ||| |||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  34392180 gtaagattggtaggtggcacactctaattggccaatggtatataccattggtacctcaatggtacacaagtg 34392251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 21604055 - 21603960
Alignment:
Q  157 tatatcaaataaaatatctataaagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    |||||||||||||| || ||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21604055 tatatcaaataaaacatttataaagtaacattggtaggtgatacactataattggtcaatggtatataccattggtaccttaatggtacacaagtg 21603960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 80 - 239
Target Start/End: Original strand, 23863801 - 23863958
Alignment:
Q  80 ggataacacttgtgtaccataatgatatatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnntatatcaaataaaatatctataa 179  Q
    ||||| |||| ||||||||||||||||||||  |||| |||||||||||||||||||| |||||||||||       |||||||||||||  || |||||    
T  23863801 ggatagcactagtgtaccataatgatatatatcattgtccaattagaatgtgccatgtggcacaccctttaaaaatatatatcaaataaagcatttataa 23863900  T
Q  180 agtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaa 239  Q
    ||||||||||||||||| ||| |||||||||  ||||   ||||||||||||||||||||    
T  23863901 agtaacattggtaggtggcacactctaattgaccaat--aatataccattggtaccttaa 23863958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 87 - 250
Target Start/End: Complemental strand, 7381857 - 7381695
Alignment:
Q  87 acttgtgtaccataatgatatatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnntatatcaaataaaatatctataaagtaaca 186  Q
    ||||| |||| |||||| |||||||||||||||||||| |||||| ||  |  |||| |||||       |||||||||||||  || ||||||||||||    
T  7381857 acttgcgtactataatggtatatactattgcccaattaaaatgtgtcacatgacacatcctttaaaaaa-tatatcaaataaagaatttataaagtaaca 7381759  T
Q  187 ttggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaag 250  Q
    ||||||| || ||| |||||||||| |||| |||||||||||||||||||||||||||||||||    
T  7381758 ttggtagatggcacactctaattggccaatagtatataccattggtaccttaatggtacacaag 7381695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 158 - 252
Target Start/End: Original strand, 37357997 - 37358091
Alignment:
Q  158 atatcaaataaaatatctataaagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    |||| |||||||  || ||||||||||||||| |||||||||| |||||||| |||||||||||||| |||||||||||||||| ||||||||||    
T  37357997 atattaaataaagcatttataaagtaacattgataggtgacacactctaattagtcaatggtatatatcattggtaccttaatgatacacaagtg 37358091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 79 - 252
Target Start/End: Complemental strand, 4775809 - 4775635
Alignment:
Q  79 cggataacacttgtgtaccataatgatatatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnntatatcaaataaaa-tatctat 177  Q
    ||||||||| ||||||||||||||| ||||||| |||| ||||||| | |||||||||| ||||| |||||       ||||| ||||||||  ||  ||    
T  4775809 cggataacatttgtgtaccataatggtatataccattgtccaattaaattgtgccatgtggcacatcctttaaaaaaatatattaaataaaacaattaat 4775710  T
Q  178 aaagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    ||||||| |||||||| ||| ||  ||||||||| ||||  |||||| |||||||| |||||||||||| |||||    
T  4775709 aaagtaagattggtagatgagacattctaattggccaataatatatatcattggtagcttaatggtacataagtg 4775635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 80 - 230
Target Start/End: Complemental strand, 4779758 - 4779608
Alignment:
Q  80 ggataacacttgtgtaccataatgatatatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnntatatcaaataaaatatctataa 179  Q
    |||||||||||||||| ||||||| ||||||| |||| |||||||||||||| || ||  |||| |||||       ||||||||||||| ||| |||||    
T  4779758 ggataacacttgtgtatcataatggtatataccattgtccaattagaatgtgtcacgtgacacatcctttaaaaaaatatatcaaataaagtatttataa 4779659  T
Q  180 agtaacattggtaggtgacacgctctaattggtcaatggtatataccattg 230  Q
    |||||||||| |||| | ||| || ||| || |||||||||||||| ||||    
T  4779658 agtaacattgttaggcggcacactataagtgatcaatggtatatactattg 4779608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 78 - 232
Target Start/End: Original strand, 25275618 - 25275771
Alignment:
Q  78 tcggataacacttgtgtaccataatgatatatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnntatatcaaataaaatatctat 177  Q
    ||||||| ||||| |||| ||||||| ||||||  |||| |||||||||||||  || || ||||| |||||       ||||||||||||| ||| ||     
T  25275618 tcggatagcacttctgtatcataatggtatatatcattgtccaattagaatgtatcacgtggcacatcctttaaaaaagtatatcaaataaagtattta- 25275716  T
Q  178 aaagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggt 232  Q
    |||||||||||| |||||| ||| |  |||||| ||||| ||||| || ||||||    
T  25275717 aaagtaacattgataggtggcacacaataattgatcaatcgtataaactattggt 25275771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 14565928 - 14566019
Alignment:
Q  157 tatatcaaataaaatatctataaagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacaca 248  Q
    |||||||||| || ||  |||||| ||| ||||||| ||  ||| ||||| ||| |||||| |||||| ||||||||||||| |||||||||    
T  14565928 tatatcaaatgaagtacttataaaataatattggtatgtagcacactctacttgatcaatgatatataacattggtaccttagtggtacaca 14566019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 90; Significance: 2e-43; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 86 - 252
Target Start/End: Original strand, 41179567 - 41179733
Alignment:
Q  86 cacttgtgtaccataatgatatatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnntatatcaaataaaatatctataaagtaac 185  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||| || ||       ||||| |||||||| || |||||||||||    
T  41179567 cacttgtgtaccataatggtatataccattgcccaattagaatgtgccatgtggcacatccattaaaaaaatatattaaataaaacatttataaagtaac 41179666  T
Q  186 attggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    || |||||||||||| || ||||||| ||||| |||||| |||||||||||||||||||||||||||    
T  41179667 atcggtaggtgacacactttaattggccaatgatatatatcattggtaccttaatggtacacaagtg 41179733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 80 - 252
Target Start/End: Original strand, 24337828 - 24338000
Alignment:
Q  80 ggataacacttgtgtaccataatgatatatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnntatatcaaataaaatatctataa 179  Q
    ||||| |||||||||||||||||| ||||||| |||| ||||||||||||||| |||| |||||||||||       |||||||||||||  ||||||||    
T  24337828 ggatagcacttgtgtaccataatggtatataccattgtccaattagaatgtgctatgtggcacaccctttaaaaatatatatcaaataaagcatctataa 24337927  T
Q  180 agtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    |||||||||||||| || ||| |||||||||  | |||||||||||||||| ||||||||| |||||||||||    
T  24337928 agtaacattggtagatggcacactctaattgaccgatggtatataccattgctaccttaatagtacacaagtg 24338000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 78 - 252
Target Start/End: Original strand, 11254024 - 11254197
Alignment:
Q  78 tcggataacacttgtgtaccataatgatatatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnntatatcaaataaaatatctat 177  Q
    ||||||| || ||||||||||||||| ||||||| ||||| || |||||||||| || || |||||||||||       |||||||||||||| || |||    
T  11254024 tcggatagcatttgtgtaccataatggtatataccattgctcagttagaatgtgtcacgtggcacaccctttaaaaatgtatatcaaataaaacatttat 11254123  T
Q  178 aaagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    |||||||||||||||||||  |  || ||| ||||||||| |||||| ||||||||  |||||||||||||||||    
T  11254124 aaagtaacattggtaggtggtatactataa-tggtcaatgatatatatcattggtaatttaatggtacacaagtg 11254197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 108 - 245
Target Start/End: Original strand, 4708333 - 4708470
Alignment:
Q  108 atactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnntatatcaaataaaatatctataaagtaacattggtaggtgacacgctctaa 207  Q
    |||| |||||| ||||||||||||||| || |||||||||||       |||||||||||||| || |||||||||||||||||||||||||| || |||    
T  4708333 ataccattgcctaattagaatgtgccacgtggcacaccctttaaaaatatatatcaaataaaacatttataaagtaacattggtaggtgacacactttaa 4708432  T
Q  208 ttggtcaatggtatataccattggtaccttaatggtac 245  Q
    ||||   ||| ||||| |||||||||||||| ||||||    
T  4708433 ttggcgcatgatatatgccattggtaccttagtggtac 4708470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 90 - 246
Target Start/End: Complemental strand, 18168549 - 18168392
Alignment:
Q  90 tgtgtaccataatgatatatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnn-tatatcaaataaaatatctataaagtaacatt 188  Q
    |||||||||||||| |||||| |||| || ||||||| |||| || || ||||| |||||        ||||||||||||| ||| |||||||||| |||    
T  18168549 tgtgtaccataatggtatatattattacctaattagattgtgtcacgtggcacatcctttaaaaaaaatatatcaaataaagtatttataaagtaagatt 18168450  T
Q  189 ggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtaca 246  Q
    ||||||||  || ||||||||| |||||| ||||||||||||||||||||||||||||    
T  18168449 ggtaggtgggacactctaattgatcaatgatatataccattggtaccttaatggtaca 18168392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 90 - 246
Target Start/End: Complemental strand, 18632106 - 18631949
Alignment:
Q  90 tgtgtaccataatgatatatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnn-tatatcaaataaaatatctataaagtaacatt 188  Q
    |||||||||||||| |||||| |||| || ||||||| |||| || || ||||| |||||        ||||||||||||| ||| |||||||||| |||    
T  18632106 tgtgtaccataatggtatatattattacctaattagattgtgtcacgtggcacatcctttaaaaaaaatatatcaaataaagtatttataaagtaagatt 18632007  T
Q  189 ggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtaca 246  Q
    ||||||||  || ||||||||| |||||| ||||||||||||||||||||||||||||    
T  18632006 ggtaggtgggacactctaattgatcaatgatatataccattggtaccttaatggtaca 18631949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 1514899 - 1514804
Alignment:
Q  157 tatatcaaataaaatatctataaagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    |||||||||||||| || |||||||||||||||||| |||  || |||| |||| |||||| |||||| |||||||||||||||||||||||||||    
T  1514899 tatatcaaataaaacatttataaagtaacattggtatgtggtacactcttattgatcaatgttatataacattggtaccttaatggtacacaagtg 1514804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 32825910 - 32826005
Alignment:
Q  157 tatatcaaataaaatatctataaagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    |||||||||||||| |  |||||| |||||||| || ||||||  |||||||||| |||||||||| | ||||| ||| |||||||||||||||||    
T  32825910 tatatcaaataaaacacatataaaataacattgatatgtgacatactctaattggccaatggtatacaacattgatactttaatggtacacaagtg 32826005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 255
Target Start/End: Complemental strand, 23422478 - 23422450
Alignment:
Q  227 attggtaccttaatggtacacaagtgcta 255  Q
    |||||||||||||||||||||||||||||    
T  23422478 attggtaccttaatggtacacaagtgcta 23422450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 3e-42; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 80 - 252
Target Start/End: Original strand, 1211842 - 1212014
Alignment:
Q  80 ggataacacttgtgtaccataatgatatatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnntatatcaaataaaatatctataa 179  Q
    ||||| |||||||||||||||||| ||||||| ||||||| |||||||||||||| || |||||||||||       |||||||||||||  ||| ||||    
T  1211842 ggatatcacttgtgtaccataatggtatataccattgccccattagaatgtgccacgtggcacaccctttaaaaaaatatatcaaataaagcatcgataa 1211941  T
Q  180 agtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    ||||||||||  ||||| ||| | |||||| | ||||||||||||||||||||||||||||||||||||||||    
T  1211942 agtaacattgaaaggtggcacacactaattagccaatggtatataccattggtaccttaatggtacacaagtg 1212014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 79 - 252
Target Start/End: Original strand, 5403873 - 5404046
Alignment:
Q  79 cggataacacttgtgtaccataatgatatatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnntatatcaaataaaatatctata 178  Q
    |||||| |||||||||||||||||| ||||||| |||| |||||||||||||| |||||   || ||||||       |||||||||||||| |||||||    
T  5403873 cggatagcacttgtgtaccataatggtatataccattgtccaattagaatgtgtcatgtgatacgccctttaaaaaaatatatcaaataaaacatctata 5403972  T
Q  179 aagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    |||||||||||||||||| ||  |||||| ||  ||||  ||||||||||| ||||||||||||||||||||||    
T  5403973 aagtaacattggtaggtggcagactctaactgaccaataatatataccattagtaccttaatggtacacaagtg 5404046  T

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Target: chr6; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 34245663 - 34245568
Alignment:
Q  157 tatatcaaataaaatatctataaagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    ||||||||||||| ||| |||||||||||||||||| ||| ||| || | ||||||||||| |||||| ||||  |||||||||||||||||||||    
T  34245663 tatatcaaataaagtatttataaagtaacattggtacgtggcacacttttattggtcaatgttatataacattaataccttaatggtacacaagtg 34245568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 178 - 252
Target Start/End: Complemental strand, 11113631 - 11113557
Alignment:
Q  178 aaagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    ||||||||||| ||| ||||||| |||| ||| ||||||| |||||| |||||||||||||||||||||||||||    
T  11113631 aaagtaacattagtatgtgacacactcttattagtcaatgttatatagcattggtaccttaatggtacacaagtg 11113557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 188 - 252
Target Start/End: Complemental strand, 11753232 - 11753168
Alignment:
Q  188 tggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    |||||||||  || |||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  11753232 tggtaggtgggacactctaattggccgatggtatataccattggtaccttaatggtacacaagtg 11753168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 80 - 248
Target Start/End: Original strand, 32644836 - 32645002
Alignment:
Q  80 ggataacacttgtgtaccataatgatatatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnntatatcaaataaaatatctataa 179  Q
    ||||| ||||||||||| |||||| ||||||| ||||  |||||||| |||  ||||| |||||||||||       |||| |||||||| ||| | |||    
T  32644836 ggatagcacttgtgtac-ataatggtatataccattgttcaattagattgtatcatgtggcacaccctttaaaaaaatataacaaataaagtattt-taa 32644933  T
Q  180 agtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacaca 248  Q
    ||||||||| ||||||||||| |  ||||||| ||||| ||||||| || | || ||||||||||||||    
T  32644934 agtaacatttgtaggtgacacaccttaattggccaatgatatatactatcgatatcttaatggtacaca 32645002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 126
Target Start/End: Original strand, 10503257 - 10503303
Alignment:
Q  80 ggataacacttgtgtaccataatgatatatactattgcccaattaga 126  Q
    ||||| |||||||||||||||||| ||||||| |||| |||||||||    
T  10503257 ggatagcacttgtgtaccataatggtatataccattgtccaattaga 10503303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 79 - 252
Target Start/End: Original strand, 13002 - 13176
Alignment:
Q  79 cggataacacttgtgtaccataatgatatatactattgcccaattagaatgtgccatgttgcaca-ccctttnnnnnnntatatcaaataaaatatctat 177  Q
    |||||| |||||||||||||||||| ||||||| ||||||| |||||||||||||| || ||||| ||||||       |||||||||||||  ||| ||    
T  13002 cggatagcacttgtgtaccataatggtatataccattgccccattagaatgtgccacgtggcacaaccctttaaaaaaatatatcaaataaagcatcgat 13101  T
Q  178 aaagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    ||||||||||||  ||||| ||| | |||||| | ||||||||||||||||||||||||||||||||||||||||    
T  13102 aaagtaacattgaaaggtggcacacactaattagccaatggtatataccattggtaccttaatggtacacaagtg 13176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 78 - 252
Target Start/End: Complemental strand, 11369 - 11196
Alignment:
Q  78 tcggataacacttgtgtaccataatgatatatactattgcccaattagaatgtgccatgttgcacaccctttnnnnnnntatatcaaataaaatatctat 177  Q
    ||||||| || ||||||||||||||| ||||||| ||||| || |||||||||| || || |||||||||||       |||||||||||||| || |||    
T  11369 tcggatagcatttgtgtaccataatggtatataccattgctcagttagaatgtgtcacgtggcacaccctttaaaaatgtatatcaaataaaacatttat 11270  T
Q  178 aaagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    |||||||||||||||||||  |  || ||| ||||||||| |||||| ||||||||  |||||||||||||||||    
T  11269 aaagtaacattggtaggtggtatactataa-tggtcaatgatatatatcattggtaatttaatggtacacaagtg 11196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 34290 - 34195
Alignment:
Q  157 tatatcaaataaaatatctataaagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    ||||||||||||||||| |||||||||| ||||||| ||| ||| |||||||||| ||||  ||||||||||||||||||||||||||||||||||    
T  34290 tatatcaaataaaatatttataaagtaatattggtaagtggcacactctaattggccaataatatataccattggtaccttaatggtacacaagtg 34195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 23174 - 23263
Alignment:
Q  157 tatatcaaataaaatatctataaagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    ||||||||||||||||| |||||||||| ||||||||||| ||| |||||||||| ||||| ||||      | ||||||||||||||||||||||    
T  23174 tatatcaaataaaatatttataaagtaaaattggtaggtggcacactctaattggccaatgatata------tcgtaccttaatggtacacaagtg 23263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 204 - 252
Target Start/End: Complemental strand, 23142 - 23094
Alignment:
Q  204 ctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    |||||||| |||| |||||||||||||||||||||||| ||||||||||    
T  23142 ctaattggccaatagtatataccattggtaccttaatgatacacaagtg 23094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 73168 - 73072
Alignment:
Q  157 tatatcaaataaaat-atctataaagtaacattggtaggtgacacgctctaattggtcaatggtatataccattggtaccttaatggtacacaagtg 252  Q
    ||||||||||||||  || ||||||||||||||| ||| ||| ||  ||||||||  |||||||||||||||||  ||| || |||||| |||||||    
T  73168 tatatcaaataaaagcatttataaagtaacattgatagatgagacattctaattgaccaatggtatataccattaatactttgatggtatacaagtg 73072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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