View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7378_low_11 (Length: 207)
Name: NF7378_low_11
Description: NF7378
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7378_low_11 |
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Alignment Details
Target: chr8 (Bit Score: 122; Significance: 9e-63; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 20 - 190
Target Start/End: Complemental strand, 5054624 - 5054463
Alignment:
| Q |
20 |
ccaacgaacccagataatgtggaaaacccaatctttgtaactggagaatatctagtatgtatgtatgtaacaagtattgtgatgtgatgtgatgagtgag |
119 |
Q |
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| T |
5054624 |
ccaacgaacccaaacaatgtggaaaacccaatctttgtaactggagaatatctagtatgtatgta----acaagtattgtgatgtgatg-----agtgag |
5054534 |
T |
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| Q |
120 |
ggttagaatatatgtctgatgatgaagtgttcaaatgaaagagaaaaagagtaagatatggcataagatat |
190 |
Q |
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| T |
5054533 |
ggttagaatatatgtttgatgatgaagtgttcaaatgaaagagaaaaagagtaagatatggcataagatat |
5054463 |
T |
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