View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7379_low_2 (Length: 361)

Name: NF7379_low_2
Description: NF7379
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7379_low_2
NF7379_low_2
[»] chr7 (87 HSPs)
chr7 (163-361)||(12423845-12424043)
chr7 (163-361)||(44457900-44458098)
chr7 (162-361)||(45055438-45055637)
chr7 (162-361)||(47221706-47221905)
chr7 (163-361)||(20121206-20121403)
chr7 (163-361)||(41857257-41857454)
chr7 (160-361)||(7149407-7149608)
chr7 (160-361)||(8805860-8806061)
chr7 (156-361)||(38494907-38495112)
chr7 (160-361)||(45867442-45867643)
chr7 (163-361)||(11337892-11338090)
chr7 (163-361)||(24331495-24331694)
chr7 (163-361)||(34287516-34287714)
chr7 (163-361)||(42391412-42391610)
chr7 (160-361)||(8949408-8949609)
chr7 (165-361)||(43575064-43575260)
chr7 (163-361)||(31813730-31813928)
chr7 (167-361)||(46738268-46738462)
chr7 (161-361)||(49023575-49023776)
chr7 (177-361)||(45062076-45062260)
chr7 (162-361)||(21733184-21733383)
chr7 (162-361)||(23036646-23036845)
chr7 (167-361)||(21626938-21627131)
chr7 (163-361)||(31283270-31283467)
chr7 (161-361)||(2699614-2699815)
chr7 (165-361)||(41922398-41922594)
chr7 (230-361)||(17173205-17173336)
chr7 (165-361)||(46426663-46426859)
chr7 (159-361)||(7172927-7173129)
chr7 (163-361)||(11681923-11682120)
chr7 (156-361)||(19104267-19104471)
chr7 (160-361)||(21455670-21455871)
chr7 (161-346)||(8522322-8522507)
chr7 (166-361)||(41749583-41749778)
chr7 (165-361)||(49114279-49114469)
chr7 (163-361)||(19124831-19125029)
chr7 (163-361)||(16860986-16861183)
chr7 (160-361)||(32165337-32165538)
chr7 (253-361)||(31115888-31115996)
chr7 (159-282)||(41922278-41922401)
chr7 (156-262)||(42391289-42391395)
chr7 (166-282)||(2699812-2699928)
chr7 (162-282)||(24331378-24331498)
chr7 (162-282)||(38495109-38495229)
chr7 (163-282)||(21733068-21733187)
chr7 (165-282)||(45062257-45062374)
chr7 (166-282)||(8805747-8805863)
chr7 (162-282)||(45055321-45055441)
chr7 (162-329)||(10543559-10543726)
chr7 (163-282)||(20121400-20121519)
chr7 (163-282)||(41857141-41857260)
chr7 (160-282)||(11338087-11338209)
chr7 (163-277)||(34287717-34287831)
chr7 (166-263)||(7149294-7149391)
chr7 (166-283)||(7173125-7173242)
chr7 (163-260)||(47221912-47222009)
chr7 (163-263)||(28588317-28588417)
chr7 (162-282)||(29099369-29099489)
chr7 (228-361)||(43267994-43268127)
chr7 (163-262)||(41749795-41749894)
chr7 (166-263)||(12424059-12424157)
chr7 (166-282)||(8522506-8522623)
chr7 (186-282)||(8949315-8949411)
chr7 (166-282)||(45867640-45867756)
chr7 (166-275)||(9979311-9979421)
chr7 (165-282)||(17173090-17173208)
chr7 (162-260)||(43575267-43575365)
chr7 (162-247)||(21555890-21555975)
chr7 (157-263)||(16860870-16860970)
chr7 (163-249)||(21455582-21455668)
chr7 (162-304)||(41054593-41054734)
chr7 (163-282)||(44457782-44457903)
chr7 (160-263)||(31283156-31283254)
chr7 (159-263)||(19125045-19125149)
chr7 (159-260)||(27551893-27551993)
chr7 (164-282)||(49114466-49114588)
chr7 (187-361)||(48765882-48766056)
chr7 (177-258)||(23036866-23036948)
chr7 (161-250)||(43699920-43700010)
chr7 (162-282)||(48766053-48766174)
chr7 (210-270)||(41054801-41054861)
chr7 (212-263)||(49023792-49023843)
chr7 (160-214)||(31116049-31116103)
chr7 (160-263)||(11682136-11682237)
chr7 (163-282)||(19104468-19104587)
chr7 (163-204)||(32165225-32165266)
chr7 (233-282)||(46738459-46738508)
[»] chr6 (56 HSPs)
chr6 (162-361)||(22568762-22568961)
chr6 (161-361)||(20027771-20027971)
chr6 (161-361)||(9899193-9899393)
chr6 (162-361)||(17853759-17853958)
chr6 (163-361)||(9546527-9546725)
chr6 (163-361)||(21926180-21926377)
chr6 (161-361)||(3105720-3105920)
chr6 (166-361)||(685069-685264)
chr6 (163-361)||(28852188-28852386)
chr6 (165-361)||(9220105-9220301)
chr6 (162-361)||(1925115-1925314)
chr6 (167-361)||(2316493-2316687)
chr6 (159-361)||(2882999-2883201)
chr6 (163-361)||(25121613-25121811)
chr6 (162-361)||(13178339-13178538)
chr6 (160-361)||(8129529-8129731)
chr6 (166-361)||(13853258-13853452)
chr6 (163-361)||(24325108-24325307)
chr6 (158-342)||(1136879-1137064)
chr6 (164-361)||(12240481-12240679)
chr6 (163-348)||(24335533-24335720)
chr6 (159-361)||(2863696-2863898)
chr6 (159-331)||(11361785-11361957)
chr6 (151-355)||(14655064-14655268)
chr6 (191-361)||(8487978-8488150)
chr6 (158-361)||(24896288-24896492)
chr6 (231-361)||(3012029-3012159)
chr6 (156-282)||(21926057-21926183)
chr6 (166-282)||(3105607-3105723)
chr6 (149-263)||(9899409-9899523)
chr6 (162-282)||(2316684-2316804)
chr6 (158-282)||(8129728-8129852)
chr6 (166-282)||(22568958-22569074)
chr6 (163-282)||(2882883-2883002)
chr6 (163-282)||(9220298-9220417)
chr6 (161-282)||(13853140-13853261)
chr6 (162-277)||(7279552-7279668)
chr6 (163-263)||(12240695-12240795)
chr6 (161-282)||(9546408-9546530)
chr6 (164-282)||(24324993-24325111)
chr6 (163-282)||(3011912-3012032)
chr6 (166-282)||(20027968-20028084)
chr6 (160-282)||(684950-685072)
chr6 (163-258)||(2863580-2863676)
chr6 (176-282)||(17853656-17853762)
chr6 (166-258)||(11361999-11362091)
chr6 (162-282)||(13178224-13178342)
chr6 (166-282)||(8487863-8487981)
chr6 (162-277)||(27820658-27820773)
chr6 (168-263)||(28852402-28852497)
chr6 (241-361)||(25026091-25026212)
chr6 (160-304)||(32557308-32557454)
chr6 (160-226)||(1925402-1925468)
chr6 (210-283)||(14655270-14655344)
chr6 (213-283)||(24896222-24896292)
chr6 (162-218)||(25121525-25121581)
[»] chr1 (91 HSPs)
chr1 (162-361)||(17504159-17504358)
chr1 (163-359)||(50312006-50312201)
chr1 (162-361)||(8853211-8853410)
chr1 (162-361)||(45286231-45286430)
chr1 (163-361)||(5618187-5618385)
chr1 (163-361)||(9877404-9877601)
chr1 (163-361)||(16515634-16515832)
chr1 (163-361)||(40934416-40934616)
chr1 (163-361)||(32694309-32694506)
chr1 (165-361)||(12650038-12650234)
chr1 (166-361)||(40770143-40770338)
chr1 (159-361)||(44344140-44344342)
chr1 (166-361)||(3459751-3459947)
chr1 (162-361)||(26095487-26095687)
chr1 (166-361)||(1501635-1501830)
chr1 (166-361)||(4694939-4695134)
chr1 (160-361)||(39672952-39673153)
chr1 (165-361)||(43726321-43726517)
chr1 (162-361)||(8828695-8828895)
chr1 (166-354)||(27546945-27547133)
chr1 (162-361)||(46283400-46283600)
chr1 (166-361)||(730915-731110)
chr1 (163-361)||(48524607-48524804)
chr1 (162-355)||(6488994-6489187)
chr1 (157-361)||(5586481-5586685)
chr1 (186-361)||(10296708-10296881)
chr1 (166-361)||(8641061-8641258)
chr1 (168-355)||(45315378-45315565)
chr1 (186-361)||(49021690-49021864)
chr1 (166-348)||(50208361-50208544)
chr1 (156-361)||(25012640-25012846)
chr1 (161-355)||(26874349-26874543)
chr1 (160-361)||(33471413-33471609)
chr1 (163-355)||(34480306-34480498)
chr1 (162-361)||(45569014-45569202)
chr1 (161-329)||(30146207-30146375)
chr1 (165-361)||(48970700-48970898)
chr1 (161-297)||(17191196-17191333)
chr1 (163-361)||(24234653-24234850)
chr1 (162-361)||(35521337-35521522)
chr1 (215-355)||(28554312-28554452)
chr1 (160-282)||(32694503-32694625)
chr1 (159-283)||(5586681-5586805)
chr1 (162-282)||(5618070-5618190)
chr1 (163-283)||(28554190-28554310)
chr1 (214-361)||(27065261-27065407)
chr1 (162-263)||(34480183-34480284)
chr1 (163-282)||(25012843-25012961)
chr1 (163-265)||(31289254-31289356)
chr1 (165-282)||(12649924-12650041)
chr1 (162-282)||(27065144-27065264)
chr1 (166-282)||(40934613-40934729)
chr1 (163-282)||(9877598-9877717)
chr1 (160-263)||(16515848-16515951)
chr1 (163-282)||(50208551-50208670)
chr1 (162-283)||(6488870-6488992)
chr1 (161-282)||(49021861-49021982)
chr1 (163-263)||(4695150-4695250)
chr1 (164-282)||(26095684-26095803)
chr1 (162-282)||(730798-730918)
chr1 (166-282)||(1501522-1501638)
chr1 (166-282)||(10296595-10296711)
chr1 (163-263)||(39672836-39672936)
chr1 (163-282)||(8853096-8853214)
chr1 (163-282)||(45286427-45286546)
chr1 (166-283)||(26874230-26874347)
chr1 (162-282)||(33471606-33471726)
chr1 (166-282)||(40770335-40770451)
chr1 (163-263)||(48524491-48524591)
chr1 (162-246)||(29716384-29716469)
chr1 (163-263)||(7349770-7349870)
chr1 (167-283)||(27547136-27547252)
chr1 (163-263)||(43726213-43726313)
chr1 (159-282)||(44344019-44344143)
chr1 (162-276)||(45315256-45315370)
chr1 (163-282)||(46283597-46283716)
chr1 (166-263)||(48970914-48971008)
chr1 (228-359)||(16087038-16087169)
chr1 (247-353)||(35214021-35214127)
chr1 (166-282)||(8828579-8828698)
chr1 (158-282)||(8640942-8641064)
chr1 (161-282)||(35521223-35521340)
chr1 (186-263)||(45569218-45569295)
chr1 (186-282)||(3459659-3459754)
chr1 (242-297)||(4151370-4151425)
chr1 (165-282)||(17504037-17504162)
chr1 (228-303)||(48173638-48173713)
chr1 (216-282)||(24234590-24234656)
chr1 (160-218)||(27067190-27067248)
chr1 (164-218)||(49154097-49154151)
chr1 (241-297)||(14465070-14465126)
[»] chr3 (91 HSPs)
chr3 (163-361)||(20209150-20209348)
chr3 (165-361)||(18677915-18678111)
chr3 (160-361)||(14201912-14202113)
chr3 (162-361)||(15543115-15543314)
chr3 (166-361)||(29434417-29434612)
chr3 (161-361)||(2862699-2862899)
chr3 (162-361)||(25061300-25061498)
chr3 (166-361)||(44920014-44920209)
chr3 (160-361)||(27812564-27812765)
chr3 (156-361)||(35747808-35748013)
chr3 (176-361)||(45171591-45171776)
chr3 (156-361)||(46292698-46292903)
chr3 (161-361)||(28843848-28844048)
chr3 (161-361)||(45539830-45540030)
chr3 (162-361)||(44664737-44664936)
chr3 (163-361)||(49002237-49002433)
chr3 (160-361)||(38674978-38675179)
chr3 (165-361)||(45214378-45214575)
chr3 (163-361)||(39778280-39778477)
chr3 (156-361)||(21016914-21017119)
chr3 (163-361)||(11220992-11221190)
chr3 (165-361)||(45567410-45567606)
chr3 (186-361)||(11439916-11440091)
chr3 (162-361)||(44976752-44976951)
chr3 (163-361)||(18168870-18169068)
chr3 (164-361)||(11989631-11989830)
chr3 (166-361)||(44036802-44036996)
chr3 (165-361)||(14463124-14463321)
chr3 (162-361)||(31574250-31574451)
chr3 (162-355)||(41943998-41944191)
chr3 (165-361)||(6954113-6954309)
chr3 (186-361)||(15020389-15020565)
chr3 (166-361)||(53712254-53712449)
chr3 (162-360)||(26845011-26845205)
chr3 (158-361)||(13996917-13997115)
chr3 (164-305)||(32809155-32809296)
chr3 (162-297)||(50711171-50711310)
chr3 (163-355)||(14626258-14626450)
chr3 (186-361)||(43378162-43378328)
chr3 (163-288)||(35415431-35415556)
chr3 (266-361)||(18461736-18461831)
chr3 (165-300)||(36546257-36546391)
chr3 (165-300)||(36561923-36562057)
chr3 (162-282)||(13997112-13997232)
chr3 (160-282)||(36546099-36546222)
chr3 (160-282)||(36562092-36562215)
chr3 (163-282)||(38675176-38675295)
chr3 (164-282)||(44919898-44920017)
chr3 (275-361)||(40612383-40612469)
chr3 (156-282)||(50710696-50710822)
chr3 (165-282)||(20209345-20209462)
chr3 (163-263)||(14463337-14463437)
chr3 (162-282)||(46292581-46292701)
chr3 (163-282)||(44664621-44664740)
chr3 (160-282)||(11989512-11989634)
chr3 (161-282)||(11221187-11221308)
chr3 (162-263)||(31574467-31574568)
chr3 (285-361)||(2773278-2773354)
chr3 (285-361)||(50710990-50711066)
chr3 (163-282)||(39778474-39778593)
chr3 (188-282)||(14201821-14201915)
chr3 (165-282)||(45171773-45171893)
chr3 (161-282)||(29434299-29434420)
chr3 (162-263)||(32809334-32809434)
chr3 (163-260)||(50711073-50711170)
chr3 (186-282)||(15543022-15543118)
chr3 (166-282)||(45540027-45540143)
chr3 (289-361)||(50710819-50710891)
chr3 (162-283)||(41943874-41943996)
chr3 (166-263)||(11439804-11439900)
chr3 (166-282)||(45214572-45214689)
chr3 (160-252)||(50710889-50710982)
chr3 (161-260)||(2773361-2773461)
chr3 (165-263)||(53712465-53712559)
chr3 (162-282)||(21017116-21017240)
chr3 (163-282)||(35747692-35747811)
chr3 (160-282)||(2579092-2579214)
chr3 (160-282)||(6953994-6954116)
chr3 (165-263)||(44036689-44036786)
chr3 (164-260)||(18678118-18678214)
chr3 (166-263)||(27812781-27812882)
chr3 (163-282)||(49002430-49002552)
chr3 (159-221)||(25061534-25061596)
chr3 (163-283)||(14626129-14626256)
chr3 (166-282)||(15020276-15020392)
chr3 (164-263)||(26844896-26844994)
chr3 (166-263)||(28843732-28843832)
chr3 (160-258)||(18168753-18168850)
chr3 (272-361)||(2397902-2397991)
chr3 (228-327)||(2579227-2579325)
chr3 (165-263)||(44976968-44977064)
[»] chr4 (91 HSPs)
chr4 (165-361)||(5747877-5748073)
chr4 (162-361)||(32922183-32922382)
chr4 (166-361)||(52537882-52538077)
chr4 (166-361)||(26842916-26843110)
chr4 (162-361)||(39791916-39792115)
chr4 (163-361)||(52653931-52654130)
chr4 (162-361)||(45801218-45801416)
chr4 (164-361)||(35130912-35131109)
chr4 (160-361)||(16020073-16020274)
chr4 (160-361)||(44551031-44551232)
chr4 (162-353)||(9902652-9902843)
chr4 (163-361)||(17362298-17362496)
chr4 (162-357)||(15516425-15516620)
chr4 (166-361)||(26886613-26886808)
chr4 (186-361)||(46648092-46648267)
chr4 (161-361)||(18568022-18568223)
chr4 (160-361)||(25331812-25332015)
chr4 (162-361)||(36868031-36868230)
chr4 (160-361)||(45655690-45655891)
chr4 (165-361)||(41376700-41376896)
chr4 (160-355)||(32488581-32488776)
chr4 (165-361)||(10993741-10993933)
chr4 (165-323)||(54036866-54037024)
chr4 (240-361)||(41935609-41935730)
chr4 (161-361)||(20983912-20984112)
chr4 (213-361)||(22539737-22539885)
chr4 (165-361)||(44834981-44835171)
chr4 (165-361)||(16530434-16530630)
chr4 (164-355)||(23572602-23572793)
chr4 (186-361)||(32187936-32188112)
chr4 (228-361)||(38556058-38556191)
chr4 (163-361)||(26948108-26948299)
chr4 (163-355)||(31857582-31857773)
chr4 (246-361)||(7067325-7067440)
chr4 (226-361)||(46674707-46674842)
chr4 (228-360)||(24270427-24270559)
chr4 (160-283)||(20984108-20984231)
chr4 (166-361)||(43264080-43264269)
chr4 (161-282)||(41935491-41935612)
chr4 (162-282)||(16019956-16020076)
chr4 (162-282)||(52654127-52654247)
chr4 (163-282)||(43264266-43264385)
chr4 (286-361)||(46689280-46689355)
chr4 (163-277)||(15516306-15516420)
chr4 (166-361)||(9644755-9644960)
chr4 (162-282)||(10993624-10993744)
chr4 (166-361)||(53563239-53563434)
chr4 (163-262)||(52538094-52538193)
chr4 (162-359)||(23962965-23963163)
chr4 (165-282)||(17362493-17362610)
chr4 (166-283)||(23572795-23572912)
chr4 (161-282)||(26842798-26842919)
chr4 (162-263)||(41376583-41376684)
chr4 (162-282)||(26886805-26886925)
chr4 (163-283)||(31857775-31857895)
chr4 (163-282)||(9902851-9902970)
chr4 (163-262)||(32922067-32922166)
chr4 (165-262)||(7067457-7067554)
chr4 (162-283)||(32488778-32488899)
chr4 (162-263)||(49387397-49387497)
chr4 (163-282)||(45655888-45656006)
chr4 (167-282)||(46689352-46689467)
chr4 (266-361)||(49387287-49387381)
chr4 (164-282)||(38555943-38556061)
chr4 (162-282)||(16530317-16530437)
chr4 (163-282)||(18568220-18568340)
chr4 (166-282)||(26947996-26948111)
chr4 (166-282)||(39792112-39792230)
chr4 (233-361)||(18635910-18636038)
chr4 (164-304)||(49498426-49498566)
chr4 (163-302)||(54997032-54997169)
chr4 (163-282)||(44550909-44551034)
chr4 (162-282)||(22539882-22540002)
chr4 (163-263)||(35130791-35130896)
chr4 (164-260)||(5748080-5748176)
chr4 (164-303)||(50512661-50512803)
chr4 (162-361)||(30637062-30637261)
chr4 (286-361)||(37068738-37068811)
chr4 (148-303)||(17040082-17040239)
chr4 (165-282)||(30636949-30637065)
chr4 (162-263)||(36868246-36868347)
chr4 (163-270)||(53563124-53563230)
chr4 (252-361)||(5618209-5618318)
chr4 (157-260)||(44835178-44835282)
chr4 (162-213)||(41944161-41944212)
chr4 (165-224)||(46648276-46648335)
chr4 (228-282)||(25332012-25332066)
chr4 (166-219)||(23860377-23860430)
chr4 (188-277)||(24270562-24270651)
chr4 (191-263)||(32188128-32188199)
chr4 (163-223)||(44038150-44038211)
[»] chr5 (90 HSPs)
chr5 (158-361)||(32771986-32772189)
chr5 (160-361)||(2467056-2467257)
chr5 (161-361)||(12854572-12854773)
chr5 (163-361)||(7601593-7601791)
chr5 (163-361)||(33429649-33429847)
chr5 (163-361)||(42610897-42611095)
chr5 (164-361)||(40952184-40952381)
chr5 (162-361)||(1643538-1643737)
chr5 (159-361)||(14871850-14872053)
chr5 (163-361)||(16736919-16737117)
chr5 (156-361)||(13697311-13697516)
chr5 (163-361)||(13455792-13455988)
chr5 (162-361)||(19130869-19131068)
chr5 (163-361)||(3974213-3974411)
chr5 (166-361)||(2426345-2426541)
chr5 (162-361)||(1098891-1099090)
chr5 (166-361)||(3279189-3279386)
chr5 (160-361)||(13577262-13577461)
chr5 (163-360)||(30129591-30129789)
chr5 (166-361)||(7610266-7610461)
chr5 (163-361)||(2960894-2961092)
chr5 (163-361)||(2969362-2969560)
chr5 (162-361)||(6539992-6540183)
chr5 (162-361)||(24858519-24858718)
chr5 (186-361)||(33381545-33381719)
chr5 (160-361)||(37943641-37943846)
chr5 (161-327)||(31485955-31486121)
chr5 (163-361)||(19984376-19984576)
chr5 (167-355)||(37092183-37092371)
chr5 (166-361)||(31618171-31618365)
chr5 (166-361)||(22621060-22621245)
chr5 (157-355)||(8357187-8357386)
chr5 (215-355)||(5239400-5239540)
chr5 (253-361)||(18707386-18707494)
chr5 (163-264)||(39589615-39589716)
chr5 (163-282)||(19131065-19131184)
chr5 (158-263)||(6541423-6541528)
chr5 (162-282)||(33381428-33381548)
chr5 (163-274)||(2426229-2426340)
chr5 (163-282)||(7601788-7601907)
chr5 (163-282)||(24858403-24858522)
chr5 (162-361)||(12875663-12875865)
chr5 (165-282)||(19984262-19984379)
chr5 (160-304)||(34159171-34159318)
chr5 (162-282)||(40952066-40952187)
chr5 (162-282)||(1099087-1099207)
chr5 (163-283)||(14729640-14729760)
chr5 (293-361)||(39589706-39589774)
chr5 (161-283)||(37092373-37092496)
chr5 (279-361)||(3168209-3168291)
chr5 (161-282)||(3279383-3279504)
chr5 (165-282)||(7610458-7610574)
chr5 (154-282)||(12854770-12854899)
chr5 (281-361)||(2492782-2492861)
chr5 (150-282)||(14871721-14871853)
chr5 (161-282)||(16736799-16736922)
chr5 (166-282)||(33429536-33429652)
chr5 (163-282)||(22621242-22621361)
chr5 (157-282)||(12875862-12875988)
chr5 (166-283)||(1643733-1643850)
chr5 (165-262)||(2467274-2467371)
chr5 (157-282)||(31618362-31618486)
chr5 (162-282)||(32772186-32772307)
chr5 (186-282)||(13577458-13577554)
chr5 (163-282)||(39589771-39589891)
chr5 (166-277)||(30129478-30129588)
chr5 (176-263)||(37943539-37943625)
chr5 (165-263)||(8357068-8357165)
chr5 (163-281)||(40881462-40881580)
chr5 (166-283)||(5239281-5239398)
chr5 (295-355)||(14729578-14729638)
chr5 (230-304)||(35160601-35160675)
chr5 (163-282)||(42610780-42610900)
chr5 (157-282)||(18707257-18707389)
chr5 (186-258)||(18717809-18717881)
chr5 (163-282)||(3168094-3168212)
chr5 (168-282)||(13697513-13697627)
chr5 (186-282)||(13455699-13455795)
chr5 (163-269)||(17759796-17759907)
chr5 (162-282)||(8874343-8874469)
chr5 (162-217)||(42645034-42645088)
chr5 (246-328)||(261227-261309)
chr5 (237-282)||(2961089-2961134)
chr5 (237-282)||(2969557-2969602)
chr5 (253-354)||(23226698-23226799)
chr5 (170-270)||(17759969-17760068)
chr5 (238-297)||(10626577-10626636)
chr5 (165-270)||(14729450-14729552)
chr5 (165-204)||(15858264-15858303)
chr5 (228-282)||(2492858-2492912)
[»] chr8 (70 HSPs)
chr8 (164-361)||(29596403-29596600)
chr8 (162-361)||(39198733-39198931)
chr8 (163-361)||(33278935-33279134)
chr8 (166-361)||(42684904-42685099)
chr8 (161-361)||(8156707-8156906)
chr8 (167-361)||(17494839-17495033)
chr8 (163-361)||(34198951-34199149)
chr8 (165-361)||(18805748-18805943)
chr8 (186-361)||(36556558-36556733)
chr8 (161-355)||(30463912-30464106)
chr8 (163-361)||(41617048-41617238)
chr8 (163-355)||(30253748-30253940)
chr8 (166-355)||(27712767-27712956)
chr8 (162-361)||(18929701-18929897)
chr8 (163-355)||(21660849-21661041)
chr8 (163-355)||(28828338-28828530)
chr8 (165-355)||(37727201-37727391)
chr8 (228-352)||(29726652-29726776)
chr8 (163-358)||(40277341-40277543)
chr8 (162-355)||(4968132-4968326)
chr8 (162-355)||(9887133-9887327)
chr8 (160-361)||(26938302-26938501)
chr8 (161-361)||(34632223-34632423)
chr8 (160-355)||(1235581-1235776)
chr8 (218-361)||(33527056-33527199)
chr8 (163-355)||(10925224-10925416)
chr8 (166-283)||(34632419-34632536)
chr8 (162-357)||(2241470-2241666)
chr8 (163-283)||(27712958-27713078)
chr8 (162-282)||(36556730-36556850)
chr8 (163-277)||(10925103-10925217)
chr8 (163-277)||(26187328-26187442)
chr8 (156-283)||(34198828-34198955)
chr8 (162-283)||(21660725-21660847)
chr8 (165-283)||(30253628-30253746)
chr8 (161-354)||(43497330-43497518)
chr8 (233-356)||(26187198-26187321)
chr8 (163-361)||(12649596-12649797)
chr8 (160-282)||(26938183-26938305)
chr8 (162-283)||(148292-148413)
chr8 (288-361)||(148409-148482)
chr8 (166-295)||(34213388-34213517)
chr8 (166-263)||(41617254-41617351)
chr8 (166-258)||(148484-148576)
chr8 (162-282)||(8156903-8157023)
chr8 (161-282)||(33279131-33279254)
chr8 (178-277)||(40277237-40277336)
chr8 (163-361)||(24419442-24419640)
chr8 (165-283)||(28828218-28828336)
chr8 (165-263)||(33526942-33527040)
chr8 (163-282)||(29596597-29596716)
chr8 (159-262)||(39198611-39198716)
chr8 (161-270)||(2241682-2241791)
chr8 (166-283)||(30464108-30464225)
chr8 (162-282)||(42684786-42684907)
chr8 (163-282)||(38229805-38229923)
chr8 (163-260)||(37727404-37727502)
chr8 (186-283)||(1235778-1235874)
chr8 (164-263)||(18929913-18930011)
chr8 (164-282)||(43497208-43497326)
chr8 (166-269)||(2785755-2785857)
chr8 (177-283)||(4968024-4968130)
chr8 (177-283)||(9887329-9887435)
chr8 (166-263)||(18805959-18806056)
chr8 (163-270)||(24419649-24419756)
chr8 (242-361)||(38229689-38229808)
chr8 (164-282)||(35560851-35560969)
chr8 (237-298)||(24566493-24566554)
chr8 (186-282)||(12649503-12649599)
chr8 (166-282)||(7672824-7672941)
[»] chr2 (89 HSPs)
chr2 (166-361)||(11724733-11724928)
chr2 (163-361)||(35411877-35412075)
chr2 (161-361)||(9027141-9027341)
chr2 (166-361)||(17549071-17549267)
chr2 (157-361)||(30488196-30488400)
chr2 (162-361)||(341428-341627)
chr2 (163-361)||(26499527-26499725)
chr2 (160-361)||(42950516-42950717)
chr2 (164-361)||(33274396-33274595)
chr2 (160-361)||(10192081-10192283)
chr2 (163-361)||(44490304-44490502)
chr2 (164-361)||(28788983-28789180)
chr2 (161-361)||(42030537-42030737)
chr2 (186-361)||(1650526-1650701)
chr2 (163-361)||(23926391-23926589)
chr2 (166-361)||(9911912-9912110)
chr2 (166-361)||(1270112-1270307)
chr2 (171-361)||(29421701-29421891)
chr2 (164-361)||(15461256-15461453)
chr2 (166-361)||(11122647-11122842)
chr2 (162-361)||(29174921-29175122)
chr2 (160-361)||(40657297-40657498)
chr2 (163-361)||(3321996-3322191)
chr2 (159-361)||(13421190-13421395)
chr2 (166-361)||(22899135-22899330)
chr2 (160-361)||(1479025-1479225)
chr2 (166-361)||(3888987-3889182)
chr2 (162-361)||(18449472-18449668)
chr2 (155-361)||(16350708-16350920)
chr2 (210-361)||(31556794-31556945)
chr2 (165-361)||(22485996-22486194)
chr2 (166-361)||(22195927-22196121)
chr2 (163-361)||(10714008-10714206)
chr2 (216-361)||(11723822-11723968)
chr2 (186-355)||(2450111-2450280)
chr2 (228-361)||(19079375-19079508)
chr2 (156-283)||(10714202-10714329)
chr2 (162-282)||(341311-341431)
chr2 (163-282)||(35412072-35412191)
chr2 (163-274)||(38574821-38574932)
chr2 (162-282)||(31556942-31557064)
chr2 (160-282)||(44490499-44490621)
chr2 (164-361)||(29154180-29154376)
chr2 (161-282)||(29421888-29422008)
chr2 (166-262)||(28788870-28788966)
chr2 (160-263)||(1650717-1650820)
chr2 (162-282)||(11723704-11723825)
chr2 (162-263)||(18449355-18449456)
chr2 (163-283)||(2450282-2450402)
chr2 (166-282)||(22196118-22196234)
chr2 (162-282)||(42030734-42030854)
chr2 (159-282)||(30488076-30488199)
chr2 (164-282)||(3888872-3888990)
chr2 (164-263)||(13421073-13421174)
chr2 (168-282)||(29175119-29175233)
chr2 (162-263)||(12937598-12937699)
chr2 (162-282)||(29154063-29154183)
chr2 (164-263)||(15461469-15461568)
chr2 (161-282)||(9912107-9912229)
chr2 (160-282)||(17549264-17549386)
chr2 (165-282)||(11724619-11724736)
chr2 (161-282)||(22486191-22486310)
chr2 (161-282)||(23926586-23926707)
chr2 (189-282)||(38574607-38574700)
chr2 (163-263)||(19079260-19079359)
chr2 (195-282)||(1270304-1270391)
chr2 (290-361)||(20663825-20663896)
chr2 (162-249)||(26499421-26499507)
chr2 (164-263)||(33274611-33274710)
chr2 (165-282)||(16350589-16350711)
chr2 (162-304)||(14951869-14952015)
chr2 (163-282)||(10192280-10192399)
chr2 (161-361)||(18508571-18508775)
chr2 (161-248)||(42950738-42950825)
chr2 (164-282)||(3322188-3322306)
chr2 (165-224)||(20663911-20663970)
chr2 (159-247)||(4980637-4980726)
chr2 (302-359)||(38574757-38574814)
chr2 (164-224)||(29379781-29379841)
chr2 (163-260)||(1479232-1479330)
chr2 (166-204)||(14951704-14951742)
chr2 (316-361)||(38574697-38574742)
chr2 (252-303)||(2415499-2415550)
chr2 (199-282)||(22899055-22899138)
chr2 (235-282)||(40657495-40657542)
chr2 (162-196)||(20663756-20663790)
chr2 (166-223)||(16403693-16403750)
chr2 (200-263)||(11122858-11122922)
chr2 (235-299)||(30842139-30842203)
[»] scaffold0009 (2 HSPs)
scaffold0009 (163-361)||(258755-258953)
scaffold0009 (163-282)||(258950-259069)
[»] scaffold0029 (2 HSPs)
scaffold0029 (163-361)||(73373-73571)
scaffold0029 (163-282)||(73568-73687)
[»] scaffold0119 (3 HSPs)
scaffold0119 (166-361)||(41395-41590)
scaffold0119 (195-263)||(30846-30914)
scaffold0119 (210-282)||(41326-41398)
[»] scaffold0024 (2 HSPs)
scaffold0024 (162-361)||(107851-108054)
scaffold0024 (163-263)||(108070-108170)
[»] scaffold0077 (2 HSPs)
scaffold0077 (161-361)||(10035-10235)
scaffold0077 (163-282)||(9921-10038)
[»] scaffold0019 (1 HSPs)
scaffold0019 (162-359)||(44869-45065)
[»] scaffold0200 (2 HSPs)
scaffold0200 (230-361)||(4478-4609)
scaffold0200 (166-282)||(4361-4481)
[»] scaffold0005 (2 HSPs)
scaffold0005 (166-361)||(257695-257890)
scaffold0005 (162-282)||(257887-258003)
[»] scaffold0592 (2 HSPs)
scaffold0592 (210-361)||(8435-8586)
scaffold0592 (163-282)||(8583-8702)
[»] scaffold0003 (2 HSPs)
scaffold0003 (161-361)||(323420-323611)
scaffold0003 (166-282)||(323608-323723)


Alignment Details
Target: chr7 (Bit Score: 163; Significance: 5e-87; HSPs: 87)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 163 - 361
Target Start/End: Original strand, 12423845 - 12424043
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  12423845 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcata 12423944  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12423945 tgaatttttaagcttaaaattcatgattttattttcttatggtccttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 12424043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 163 - 361
Target Start/End: Complemental strand, 44458098 - 44457900
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  44458098 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcata 44457999  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44457998 ttaatttttaagcttaaaattcatgattttattttcttatggtccttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 44457900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 162 - 361
Target Start/End: Complemental strand, 45055637 - 45055438
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| |||||||||||||||||||||||||||    
T  45055637 aggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcat 45055538  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  45055537 atgaatttttaagtttaaaattcatgattttattttcttatggtctttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 45055438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 162 - 361
Target Start/End: Original strand, 47221706 - 47221905
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||||||||||||  ||||||||||||||||||| ||| ||||| ||||||||| | |||||| |||||||||||||||||||||||||||    
T  47221706 aggcaaaattacatttttagtcccttaacttaatttcaggtaacagtttggtcatttatctttttttcatttcaatttggtcctttttgtccattttcat 47221805  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  47221806 atgaatttttaagcttaaaattcatgattttattttcttatggtccttcagtcttcaaatctatgatcttcatctatgtttgtataagaatattagattt 47221905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 163 - 361
Target Start/End: Original strand, 20121206 - 20121403
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  ||||||||||||| ||||| ||| ||||||||||||||| | |||||| ||| ||||||||||||||||||||||||    
T  20121206 ggcaaaattacacttttagtcccttaacttaatttcgggtaacagtttggtcctttatcttttt-tcatttcaatctggtcctttttgtccattttcata 20121304  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20121305 tgaatttttaagcttaaaattcatgattttattttcttatggtccttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 20121403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 163 - 361
Target Start/End: Complemental strand, 41857454 - 41857257
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  ||||||||||||| ||||| ||| ||||||||||||||| | |||||| ||| ||||||||||||||||||||||||    
T  41857454 ggcaaaattacacttttagtcccttaacttaatttcgggtaacagtttggtcctttatcttttt-tcatttcaatctggtcctttttgtccattttcata 41857356  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41857355 tgaatttttaagcttaaaattcatgattttattttcttatggtccttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 41857257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 160 - 361
Target Start/End: Complemental strand, 7149608 - 7149407
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttc 259  Q
    ||||||||||||||| ||||||||| ||||||||||||||| ||| ||| ||||| ||||||||| | |||||| ||||||||| |||||||||||||||    
T  7149608 aaaggcaaaattacacttttagtctcttaacttaatttcagataacagtttggtcatttatctttttttcatttcaatttggtcttttttgtccattttc 7149509  T
Q  260 atatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagat 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||    
T  7149508 atatgaatttttaagcttaaaattcatgattttattttcttatggtctttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagat 7149409  T
Q  360 tt 361  Q
    ||    
T  7149408 tt 7149407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 160 - 361
Target Start/End: Complemental strand, 8806061 - 8805860
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttc 259  Q
    ||||| ||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| |||||||||||||||||||||||||    
T  8806061 aaaggtaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttc 8805962  T
Q  260 atatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagat 359  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||    
T  8805961 atatgaatttttaagtttaaaattcatgattttattttcttatggtctttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagat 8805862  T
Q  360 tt 361  Q
    ||    
T  8805861 tt 8805860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 156 - 361
Target Start/End: Original strand, 38494907 - 38495112
Alignment:
Q  156 aattaaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccat 255  Q
    |||| |||||||| ||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| |||||||||||||||||||||    
T  38494907 aattgaaggcaaagttacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccat 38495006  T
Q  256 tttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatatt 355  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||| |||||||||||    
T  38495007 tttcatatgaatttttaagcttaaaattcatgattttattttcttatggtctttcagtcttcaaatctatgatcctcgtttatgtttggataagaatatt 38495106  T
Q  356 agattt 361  Q
    ||||||    
T  38495107 agattt 38495112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 160 - 361
Target Start/End: Original strand, 45867442 - 45867643
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttc 259  Q
    ||||||||||||||| ||||||||  |||||||||||||| |||| ||| ||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  45867442 aaaggcaaaattacacttttagtcccttaacttaatttcaagtaacagtttggtcctttatctttttttcattttaatttggtcctttttgtccattttc 45867541  T
Q  260 atatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagat 359  Q
    |||||||||||||||||||||||||||||||||||||||||||| || || | ||||||||||||||||||||||||||||||| |||||||||||||||    
T  45867542 atatgaatttttaagcttaaaattcatgattttattttcttatgatctttcaatcttcaaatctatgatcctcgtctatgtttgtataagaatattagat 45867641  T
Q  360 tt 361  Q
    ||    
T  45867642 tt 45867643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 163 - 361
Target Start/End: Original strand, 11337892 - 11338090
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  |||||||||||||| |||| | | ||||||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  11337892 ggcaaaattacacttttagtcctttaacttaatttcatgtaacaatttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcata 11337991  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11337992 tgaatttttaagcttaaaattcatgattttattttcttatggtccttcaatcttcaaatctatgatcatcgtctatgtttgcataagaatattagattt 11338090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 163 - 361
Target Start/End: Complemental strand, 24331694 - 24331495
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatat-cattttaatttggtcctttttgtccattttcat 261  Q
    |||||||||||| ||||||||  ||||||||||||||| ||| | | ||||||||||||||| | | ||||| |||||||||||||||||||||||||||    
T  24331694 ggcaaaattacacttttagtcccttaacttaatttcagataataatttggtcctttatcttttttttcatttcaatttggtcctttttgtccattttcat 24331595  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24331594 atgaatttttaagcttaaaattcatgattttatttttttatggtccttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 24331495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 163 - 361
Target Start/End: Original strand, 34287516 - 34287714
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||| ||| |||||||||||| |||||| ||| ||||||||||||||| | |||||| ||||||||| ||||||||||||||||||    
T  34287516 ggcaaaattacacttttactctcttaacttaattttaggtaacagtttggtcctttatctttttttcatttcaatttggtcatttttgtccattttcata 34287615  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||||||||||||||||||||||||| || || | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  34287616 tgaatttttaagcttaaaattcatgattttattttcttatgatctttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 34287714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 163 - 361
Target Start/End: Complemental strand, 42391610 - 42391412
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  ||||||| ||||||||||| ||| ||||||| ||||||| | |||||| ||||||||||||||||||||||||||||    
T  42391610 ggcaaaattacacttttagtcccttaacttgatttcaggtaacagtttggtcctctatctttttttcatttcaatttggtcctttttgtccattttcata 42391511  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||| |||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42391510 tgaaattttaaacttaaaattcatgattttattttcttatggtctttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 42391412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 160 - 361
Target Start/End: Complemental strand, 8949609 - 8949408
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttc 259  Q
    ||||| ||||||||||||||||||  ||||||||||||||| ||| ||| ||||| ||||||||  | | ||||||||||||||||||||||||||||||    
T  8949609 aaaggaaaaattacatttttagtcccttaacttaatttcagataacagtttggtcttttatcttatttttattttaatttggtcctttttgtccattttc 8949510  T
Q  260 atatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagat 359  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||    
T  8949509 atatgaagttttaagcttaaaattcatgattttattttcttatggtctttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagat 8949410  T
Q  360 tt 361  Q
    ||    
T  8949409 tt 8949408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 165 - 361
Target Start/End: Original strand, 43575064 - 43575260
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatg 264  Q
    ||||||||||||| |||||  ||||||||||||||||||| ||| ||||| ||||||||| | ||| || ||||||||||||||||||||||||||||||    
T  43575064 caaaattacatttatagtcccttaacttaatttcaggtaacagtttggtcatttatctttttttcaattcaatttggtcctttttgtccattttcatatg 43575163  T
Q  265 aatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    || ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  43575164 aaattttaagcttaaaattcatgattttattttcttatggtctttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatattatattt 43575260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 163 - 361
Target Start/End: Original strand, 31813730 - 31813928
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||| ||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| ||||||||| ||||||||||||||||||    
T  31813730 ggcaaaattacacttttaatcccttaacttaatttcaggtaacagtttggtcctttatctttttctcatttcaatttggtcttttttgtccattttcata 31813829  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||   |||||||||||||||||||||||||||||||||||||||||||||||||    
T  31813830 tgaatttttaagcttaaaatttatgattttattttcttatggtctttcgatcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 31813928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 167 - 361
Target Start/End: Original strand, 46738268 - 46738462
Alignment:
Q  167 aaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatgaa 266  Q
    |||||||||||||||||  ||||||||||||||||||| ||| |||| |||||||||| | |||||| |||||||||  |||||||||||||||||||||    
T  46738268 aaattacatttttagtcctttaacttaatttcaggtaacagtttggttctttatctttttttcatttcaatttggtctattttgtccattttcatatgaa 46738367  T
Q  267 tttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||| ||||||||||||||||||||||||||||||||||| || | ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  46738368 ttttaaagcttaaaattcatgattttattttcttatggtctttcaatcttcaaatctatgatcatcgtctatgtttgcataagaatattagattt 46738462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 161 - 361
Target Start/End: Original strand, 49023575 - 49023776
Alignment:
Q  161 aaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatat-cattttaatttggtcctttttgtccattttc 259  Q
    |||||||||||||||||||||||  ||||||||||||||||||| ||| ||||||||||||||| | | ||||| |||||||||||||||||||||||||    
T  49023575 aaggcaaaattacatttttagtcccttaacttaatttcaggtaacagtttggtcctttatcttttttttcatttcaatttggtcctttttgtccattttc 49023674  T
Q  260 atatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagat 359  Q
    ||||||||||||||| |||||||| |||||||| ||||||||||||| || | ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  49023675 atatgaatttttaagtttaaaatttatgattttcttttcttatggtctttcaatcttcaaatctataatcatcgtctatgtttgcataagaatattagat 49023774  T
Q  360 tt 361  Q
    ||    
T  49023775 tt 49023776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 177 - 361
Target Start/End: Original strand, 45062076 - 45062260
Alignment:
Q  177 tttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatgaatttttaagct 276  Q
    |||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| ||||||| ||||||||||||||||||||| ||||||||||||    
T  45062076 tttagtcctttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggccctttttgtccattttcatataaatttttaagct 45062175  T
Q  277 taaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  45062176 taaaattcatgattttattttcttatggtctttcagtcttcaaatctatgatcctcgtttatgtttggataagaatattagattt 45062260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 162 - 361
Target Start/End: Complemental strand, 21733383 - 21733184
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    |||||||||||||||| |||||| ||||||||||||||||||| | | | ||||||||||||| | |||||| ||||||||| |||||||||||||||||    
T  21733383 aggcaaaattacatttatagtctcttaacttaatttcaggtaacaatttcgtcctttatctttttttcatttcaatttggtcatttttgtccattttcat 21733284  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||| || ||||||||||| |||||| ||||||||||||||||||||||||||| ||||    
T  21733283 atgaaattttaagtttaaaattcatgattttattttcttatggtctttcagtcttcaaatgtatgattctcgtctatgtttgcataagaatattatattt 21733184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 162 - 361
Target Start/End: Original strand, 23036646 - 23036845
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| ||||||||  |||||||||||| |||||| ||| | ||| ||||||||| | |||||| |||||||||||||||||| ||||||||    
T  23036646 aggcaaaattacaattttagtcccttaacttaattttaggtaacagtttagtcttttatctttttttcatttcaatttggtcctttttgtctattttcat 23036745  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||  |||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  23036746 atacatttttaagcttaaaattcatgattttattttcttatgatcttttggtcttcaaatctatgatcctcgtttatgtttgcataagaatattagattt 23036845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 167 - 361
Target Start/End: Original strand, 21626938 - 21627131
Alignment:
Q  167 aaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatgaa 266  Q
    |||||| | ||||||||| |||||||||||| |||||| ||| |||| |||||||||| | ||||||||||||||||||||||||||||||||||||  |    
T  21626938 aaattatacttttagtcttttaacttaattttaggtaacagtttggttctttatcttttt-tcattttaatttggtcctttttgtccattttcatataca 21627036  T
Q  267 tttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||||||||||||||||||||||||||| ||| || || |||||||||||||||| |||||||||||||||||||||||||||||||    
T  21627037 tttttaagcttaaaattcatgattttattttcttattgtctttcagccttcaaatctatgatcatcgtctatgtttgcataagaatattagattt 21627131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 163 - 361
Target Start/End: Complemental strand, 31283467 - 31283270
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  |||||||||||| | |||| ||| ||||||||||||||| | |||||| |||||| || |||||||| |||||||||    
T  31283467 ggcaaaattacacttttagtcccttaacttaattttatgtaacagtttggtcctttatctttttttcatttcaatttgatcatttttgtctattttcata 31283368  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  31283367 tgaatttt-aagcttaaaattcatgattttattttcttatggtctttcagtcttcaaatctatgttcctcgtctatgtttgcataagaatattagattt 31283270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 161 - 361
Target Start/End: Original strand, 2699614 - 2699815
Alignment:
Q  161 aaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatat-cattttaatttggtcctttttgtccattttc 259  Q
    |||| ||||||||||||||||||  ||||||||||||||| ||| | | ||||| |||| |||| | | ||||| |||||||||||||||||||||||||    
T  2699614 aaggtaaaattacatttttagtcccttaacttaatttcagataatattttggtcatttaccttttttttcatttcaatttggtcctttttgtccattttc 2699713  T
Q  260 atatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagat 359  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  2699714 atatgaatttttaagtttaaaatttatgattttattttcttatggtctttcagtcttcaaatctatgatcctcttctatgtttgcataagaatattagat 2699813  T
Q  360 tt 361  Q
    ||    
T  2699814 tt 2699815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 165 - 361
Target Start/End: Complemental strand, 41922594 - 41922398
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatg 264  Q
    |||||||||| ||||||| | |||||||||||||| |||| | | ||||  ||||||||| | |||||| ||||||||| ||||||||||||||||||||    
T  41922594 caaaattacacttttagtgtcttaacttaatttcatgtaacaatttggttgtttatctttttttcatttcaatttggtcatttttgtccattttcatatg 41922495  T
Q  265 aatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||| ||||||||||||||||||||||||||||||| || | ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  41922494 aatttttaagtttaaaattcatgattttattttcttatggtctttcaatcttcaaatctatgatcctagtctatgtttgcataagaatattagattt 41922398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 230 - 361
Target Start/End: Complemental strand, 17173336 - 17173205
Alignment:
Q  230 attttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatc 329  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  17173336 attttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttatggtccttcggtcttcaaatctatgatc 17173237  T
Q  330 ctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||||||||||||||||    
T  17173236 ctcgtctatgtttgcataagaatattagattt 17173205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 165 - 361
Target Start/End: Original strand, 46426663 - 46426859
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatg 264  Q
    |||||||||| ||||| ||  |||||||||||| |||||| | | ||||||||||||||| | |||||| ||||||||||||||||||||||||||||||    
T  46426663 caaaattacacttttaatcctttaacttaattttaggtaacaatttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatg 46426762  T
Q  265 aatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||| ||||||| |||||||||||||||||| || | | |||||| ||||||||||| ||||||||||||||||||||||||||||    
T  46426763 aatttttaagcttaatattcatggttttattttcttatggtctttcaatattcaaaactatgatcctcatctatgtttgcataagaatattagattt 46426859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 159 - 361
Target Start/End: Original strand, 7172927 - 7173129
Alignment:
Q  159 taaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccatttt 258  Q
    |||||||||||||||| |||| |||  ||||||| |||| |||||| | | | ||||||||||||| | |||||| ||||| ||||||||  |||||||     
T  7172927 taaaggcaaaattacacttttggtcccttaactttattttaggtaacaatttagtcctttatctttttttcatttcaattttgtccttttgatccattta 7173026  T
Q  259 catatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattaga 358  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||| |    
T  7173027 catatgaatttttaagcttaaaattcatgattttattttcttatggtctttcagtcttcaaatctatgatccttgtctatgtttgcataagaatattaaa 7173126  T
Q  359 ttt 361  Q
    |||    
T  7173127 ttt 7173129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 163 - 361
Target Start/End: Original strand, 11681923 - 11682120
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    ||||||||||| |||||| ||  |||| |||||||||  ||| | | | ||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  11681923 ggcaaaattacgtttttactcc-ttaatttaatttcaaataacaatttagtcctttatctttttttcattttaacttggtcctttttgtccattttcata 11682021  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||| |||||| ||||||||||||||||||||||||||||    
T  11682022 tgaatttttaagcttaaaattcatgattttattttcttatggtctttcagttttcaaatctataatcctcatctatgtttgcataagaatattagattt 11682120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 156 - 361
Target Start/End: Original strand, 19104267 - 19104471
Alignment:
Q  156 aattaaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccat 255  Q
    ||||| ||||||||||| ||||||||||  |||||||||||| | |||| ||| |  || ||| ||||| | | |||| ||||||||| |||||||||||    
T  19104267 aattataggcaaaattatatttttagtcccttaacttaattttaagtaacagtttaatcatttttcttttttt-atttcaatttggtcatttttgtccat 19104365  T
Q  256 tttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatatt 355  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||     
T  19104366 tttcatatgaatttttaagcttaaaattcatgattttattttcttatggtttttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatata 19104465  T
Q  356 agattt 361  Q
    ||||||    
T  19104466 agattt 19104471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 160 - 361
Target Start/End: Complemental strand, 21455871 - 21455670
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttc 259  Q
    ||||||||||||||| |||||||   |||| ||||||| |||||| | | ||||||||||||||| | |||||| |||||||| |||||||| |||||||    
T  21455871 aaaggcaaaattacacttttagttccttaatttaattttaggtaacaatttggtcctttatctttttttcatttcaatttggttctttttgttcattttc 21455772  T
Q  260 atatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagat 359  Q
    ||||  |||||||||||||||| |||||||||||||||||||||||| |  ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  21455771 atatacatttttaagcttaaaaatcatgattttattttcttatggtcttccagttttcaaatctatgatcctcgtctatgtttgcataagaatattagat 21455672  T
Q  360 tt 361  Q
    ||    
T  21455671 tt 21455670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 161 - 346
Target Start/End: Original strand, 8522322 - 8522507
Alignment:
Q  161 aaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatat-cattttaatttggtcctttttgtccattttc 259  Q
    |||||||||||||| ||||||||  ||||||||||||||||||| | | ||||||||||||||| | | ||||| ||||||||||||||||||||||| |    
T  8522322 aaggcaaaattacacttttagtcccttaacttaatttcaggtaacattttggtcctttatcttttttttcatttcaatttggtcctttttgtccattt-c 8522420  T
Q  260 atatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcat 346  Q
    || |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| || |||||||||||||    
T  8522421 atttgaatttttaagcttaaaattcatgattttattttcttatggtctttcagtcttcaaatctatgatcatcttctatgtttgcat 8522507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 166 - 361
Target Start/End: Original strand, 41749583 - 41749778
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||| ||||||| ||  |||| ||||||| |||||| | | || |||||||||||| | |||||||||||||||||||||||| |||||| ||||      
T  41749583 aaaattatatttttaatcccttaatttaattttaggtaataatttgatcctttatctttttttcattttaatttggtcctttttgttcatttttatatac 41749682  T
Q  266 atttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||| |||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  41749683 atttttaatcttaaaattcatgattttattttcttatagtcattcagtcttcaaatctatgatcctcgtctatgtttgcataagaatgttagattt 41749778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 165 - 361
Target Start/End: Original strand, 49114279 - 49114469
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatg 264  Q
    |||||||||| ||||| ||  ||||||||||||||||||| ||| | ||||||||||||| | | |||| ||||||||| |||||||||||||| |||||    
T  49114279 caaaattacacttttaatcatttaacttaatttcaggtaacagttttgtcctttatcttttttttatttcaatttggtcttttttgtccatttttatatg 49114378  T
Q  265 aatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||||||||||||||||||||||||      ||| || | |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  49114379 aatttttaagcttaaaattcatgattttatttt------gtctttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatgttagattt 49114469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 163 - 361
Target Start/End: Original strand, 19124831 - 19125029
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||| ||  ||||||||| || |||||| | | || |||||||||||| | |||||| ||||||||||||||| ||||||||||||    
T  19124831 ggcaaaattacacttttaatcccttaacttaagtttaggtaacaatttgatcctttatctttttttcatttcaatttggtcctttttatccattttcata 19124930  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |  ||||||||||||||||||||||||||||||| ||||| ||  || ||||||||||| |||||||||||| ||||||||||||| ||||||||||||    
T  19124931 tacatttttaagcttaaaattcatgattttatttacttatagtttttcagtcttcaaatatatgatcctcgtttatgtttgcataaaaatattagattt 19125029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 163 - 361
Target Start/End: Complemental strand, 16861183 - 16860986
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||||||||||||  |||||||||||| || |||  || || |||||||| ||| | |||||  ||||| ||||||||  ||||||| | ||    
T  16861183 ggcaaaattacatttttagtccattaacttaattttagataactgtttgatcctttattttttt-tcattacaatttcgtccttttgatccatttacgta 16861085  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||| ||||||||||||||||||||||||||||||||||| || |||||| |||||||||||| | |||||||||||||||||||||||||||||    
T  16861084 tgaattttgaagcttaaaattcatgattttattttcttatggtctttcagtctttaaatctatgatctttgtctatgtttgcataagaatattagattt 16860986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 160 - 361
Target Start/End: Complemental strand, 32165538 - 32165337
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatat-cattttaatttggtcctttttgtccatttt 258  Q
    ||||||||||||||||||| ||||  ||||||||||||||| ||| | | || || ||||||||| | | ||||| ||||||||| ||||| ||||||||    
T  32165538 aaaggcaaaattacatttt-agtcccttaacttaatttcagttaataatttgatcttttatcttttttttcatttcaatttggtcttttttatccatttt 32165440  T
Q  259 catatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattaga 358  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || || |||||| |||||||||||  |||| |||||||| |||||||||| |||    
T  32165439 catatgaatttttaagcttaaaattcatgattttattttcttatgctctttcagtctttaaatctatgattttcgtttatgtttgaataagaatataaga 32165340  T
Q  359 ttt 361  Q
    |||    
T  32165339 ttt 32165337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 253 - 361
Target Start/End: Original strand, 31115888 - 31115996
Alignment:
Q  253 cattttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaat 352  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||| || | ||||||||||||| ||||||||||||||||||||||||||    
T  31115888 cattttcatatgaattttgaagtttaaaattcatgattttattttcttatggtctttcaatcttcaaatctatcatcctcgtctatgtttgcataagaat 31115987  T
Q  353 attagattt 361  Q
    |||| ||||    
T  31115988 attatattt 31115996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 159 - 282
Target Start/End: Original strand, 41922278 - 41922401
Alignment:
Q  159 taaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccatttt 258  Q
    |||||||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| ||||||||||||||||||||||||    
T  41922278 taaaggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccatttt 41922377  T
Q  259 catatgaatttttaagcttaaaat 282  Q
     ||||  |||||||||||| ||||    
T  41922378 tatatacatttttaagcttcaaat 41922401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 156 - 262
Target Start/End: Original strand, 42391289 - 42391395
Alignment:
Q  156 aattaaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccat 255  Q
    |||||| |||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| |||||||||||||||||||||    
T  42391289 aattaatggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccat 42391388  T
Q  256 tttcata 262  Q
    |||||||    
T  42391389 tttcata 42391395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 2699928 - 2699812
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||||| ||||||||| ||||||||||||||||||| ||| ||||||||||||||| | |||||| ||||||||| |||||||||||||||||||      
T  2699928 aaaattacacttttagtctcttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcatttttgtccattttcatatac 2699829  T
Q  266 atttttaagcttaaaat 282  Q
    ||||| |||||| ||||    
T  2699828 attttcaagcttcaaat 2699812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 24331378 - 24331498
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||||||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| |||||| || |||||||||||||||||    
T  24331378 aggcaaaattacatttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttgatcatttttgtccattttcat 24331477  T
Q  262 atgaatttttaagcttaaaat 282  Q
    ||  ||||| |||||| ||||    
T  24331478 atacattttcaagcttcaaat 24331498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 162 - 282
Target Start/End: Complemental strand, 38495229 - 38495109
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| ||||| |||||||||||||||||||||    
T  38495229 aggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttagtcctttttgtccattttcat 38495130  T
Q  262 atgaatttttaagcttaaaat 282  Q
    ||  ||||| |||||| ||||    
T  38495129 atacattttcaagcttcaaat 38495109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 163 - 282
Target Start/End: Original strand, 21733068 - 21733187
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| | ||||||  ||||||||||||||||||| ||| ||||| ||||||||| | |||||| ||||||||||||||||||||||||||||    
T  21733068 ggcaaaattacactattagtcccttaacttaatttcaggtaacagtttggtcttttatctttttttcatttcaatttggtcctttttgtccattttcata 21733167  T
Q  263 tgaatttttaagcttaaaat 282  Q
    |  ||||| |||||||||||    
T  21733168 tacattttcaagcttaaaat 21733187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 165 - 282
Target Start/End: Complemental strand, 45062374 - 45062257
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatg 264  Q
    |||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| ||||| |||||||||||||||||||||||     
T  45062374 caaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttagtcctttttgtccattttcatata 45062275  T
Q  265 aatttttaagcttaaaat 282  Q
     ||||| |||||| ||||    
T  45062274 cattttcaagcttcaaat 45062257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 8805747 - 8805863
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||||||||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| ||||||||| |||||||||||||| ||||      
T  8805747 aaaattacatttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcttttttgtccatttttatatac 8805846  T
Q  266 atttttaagcttaaaat 282  Q
    ||||| |||||| ||||    
T  8805847 attttcaagcttcaaat 8805863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 45055321 - 45055441
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| ||||||||  ||||||||||||||||||| | | ||||||||||||||| | |||||| |||||||||||||||||||||||| ||    
T  45055321 aggcaaaattacacttttagtcccttaacttaatttcaggtaacaatttggtcctttatctttttttcatttcaatttggtcctttttgtccatttttat 45055420  T
Q  262 atgaatttttaagcttaaaat 282  Q
    ||  ||||| |||||| ||||    
T  45055421 atacattttcaagcttcaaat 45055441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 162 - 329
Target Start/End: Complemental strand, 10543726 - 10543559
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    |||||| ||||||| |||||||  ||||||| |||| |||||| ||| || |||||||||||| | |||||| ||||| |||||||| ||||||||| ||    
T  10543726 aggcaatattacatgtttagtcccttaactttattttaggtaacagtttgatcctttatctttttctcatttcaattttgtccttttggtccatttttat 10543627  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatc 329  Q
    ||| ||||| |||||| ||||| ||| ||||| |||||||||| | || | ||||||||| |||||||    
T  10543626 atggattttcaagcttcaaatttatggttttaatttcttatggcctttcaatcttcaaatatatgatc 10543559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 163 - 282
Target Start/End: Complemental strand, 20121519 - 20121400
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  |||||||||||||| |||| ||| ||||||||||||||| | |||||| |||||| |||||||||||||||||||||    
T  20121519 ggcaaaattacacttttagtcctttaacttaatttcatgtaacagtttggtcctttatctttttttcatttcaatttgatcctttttgtccattttcata 20121420  T
Q  263 tgaatttttaagcttaaaat 282  Q
    |  ||||| |||||| ||||    
T  20121419 tacattttcaagcttcaaat 20121400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 163 - 282
Target Start/End: Original strand, 41857141 - 41857260
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  |||||||||||||| |||| ||| ||||||||||||||| | |||||| |||||| |||||||||||||||||||||    
T  41857141 ggcaaaattacacttttagtcctttaacttaatttcatgtaacagtttggtcctttatctttttttcatttcaatttgatcctttttgtccattttcata 41857240  T
Q  263 tgaatttttaagcttaaaat 282  Q
    |  ||||| |||||| ||||    
T  41857241 tacattttcaagcttcaaat 41857260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 160 - 282
Target Start/End: Complemental strand, 11338209 - 11338087
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttc 259  Q
    ||||| ||||||||||||||||||  ||||||||||||||||||| | | ||||||||||||||| | |||||| |||||| ||||||||||||||||||    
T  11338209 aaaggtaaaattacatttttagtcccttaacttaatttcaggtaacaatttggtcctttatctttttttcatttcaatttgatcctttttgtccattttc 11338110  T
Q  260 atatgaatttttaagcttaaaat 282  Q
    || |  ||||| |||||| ||||    
T  11338109 atgtacattttcaagcttcaaat 11338087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 163 - 277
Target Start/End: Complemental strand, 34287831 - 34287717
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  ||||||||||||||||||| | | ||||||||||||||| | |||||| |||||||||||||||||||||||| |||    
T  34287831 ggcaaaattacaattttagtcccttaacttaatttcaggtaacactttggtcctttatctttttttcatttcaatttggtcctttttgtccatttttata 34287732  T
Q  263 tgaatttttaagctt 277  Q
    |  ||||| ||||||    
T  34287731 tacattttcaagctt 34287717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 166 - 263
Target Start/End: Original strand, 7149294 - 7149391
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatat 263  Q
    ||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| |||||||||||||||||||||||| ||||    
T  7149294 aaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccatttttatat 7149391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 166 - 283
Target Start/End: Complemental strand, 7173242 - 7173125
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||||| ||||| ||  ||||||||||||||||||| ||| || |||||||||||| | |||||| |||||||||||||||||||||||||||||      
T  7173242 aaaattacacttttaatcccttaacttaatttcaggtaacagtttgatcctttatctttttttcatttcaatttggtcctttttgtccattttcatatac 7173143  T
Q  266 atttttaagcttaaaatt 283  Q
    ||||| |||||| |||||    
T  7173142 attttcaagcttcaaatt 7173125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 163 - 260
Target Start/End: Complemental strand, 47222009 - 47221912
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttca 260  Q
    |||||||||||| |||||||   ||||||||||||||||||| ||| ||||||||||||||| | |||||||||||||||||||||||| ||||||||    
T  47222009 ggcaaaattacacttttagttccttaacttaatttcaggtaacagtttggtcctttatctttttttcattttaatttggtcctttttgttcattttca 47221912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 163 - 263
Target Start/End: Original strand, 28588317 - 28588417
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  ||||||||||||||||||| ||| ||||| ||||||||| | |||||| |||||| |||||||||||||||||||||    
T  28588317 ggcaaaattacacttttagtcctttaacttaatttcaggtaacagtttggtcttttatctttttttcatttcaatttgatcctttttgtccattttcata 28588416  T
Q  263 t 263  Q
    |    
T  28588417 t 28588417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 162 - 282
Target Start/End: Complemental strand, 29099489 - 29099369
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| ||||||||  ||||||||||||||||||| ||| || |||||||| ||| | |||||| |||||||||||||||||||||||| ||    
T  29099489 aggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttgatcctttatttttttttcatttcaatttggtcctttttgtccatttttat 29099390  T
Q  262 atgaatttttaagcttaaaat 282  Q
    ||  ||||| |||||| ||||    
T  29099389 atacattttcaagcttcaaat 29099369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 228 - 361
Target Start/End: Original strand, 43267994 - 43268127
Alignment:
Q  228 tcattttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatga 327  Q
    ||||||||||||  ||||||| || |||||| ||||| ||||| |||||| ||||| ||| ||||||||||||||||   || | |||||||||||||||    
T  43267994 tcattttaattttatccttttggttcatttttatatggattttcaagctttaaatttatggttttattttcttatggcatttcaatcttcaaatctatga 43268093  T
Q  328 tcctcgtctatgtttgcataagaatattagattt 361  Q
    || ||  |||| ||||||||||||||||||||||    
T  43268094 tcttcaactatatttgcataagaatattagattt 43268127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 163 - 262
Target Start/End: Complemental strand, 41749894 - 41749795
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||| | ||||||||| ||| ||||||||||||||| | | ||||| ||||||||| | |||||||||||||||| ||||||||||||||||||    
T  41749894 ggcaaaattataattttagtctcttagcttaatttcaggtaacaatttggtcatttatctttttttcattttaatttggtcttttttgtccattttcata 41749795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 166 - 263
Target Start/End: Complemental strand, 12424157 - 12424059
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatc-tttatatcattttaatttggtcctttttgtccattttcatat 263  Q
    ||||||||| ||||||||  ||||||||||||||||||| ||| |||||||||||| ||| | |||||| |||||||||||||||||| ||||||||||    
T  12424157 aaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatcttttttttcatttcaatttggtcctttttgtcaattttcatat 12424059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 8522623 - 8522506
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatc-tttatatcattttaatttggtcctttttgtccattttcatatg 264  Q
    ||||||||| ||||||||  ||||||||||||||||||| | | |||||||||||| ||| | |||||| |||||||||||||||||||||||||| ||     
T  8522623 aaaattacacttttagtcccttaacttaatttcaggtaacaatttggtcctttatcttttttttcatttcaatttggtcctttttgtccattttcacata 8522524  T
Q  265 aatttttaagcttaaaat 282  Q
     ||||| |||||| ||||    
T  8522523 cattttcaagcttcaaat 8522506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 186 - 282
Target Start/End: Original strand, 8949315 - 8949411
Alignment:
Q  186 ttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaat 282  Q
    ||||||||||||||||||| ||| ||||||||||||||| | |||||| ||||||||| |||||||||||||| ||||  ||||| |||||| ||||    
T  8949315 ttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcatttttgtccatttttatatacattttcaagcttcaaat 8949411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 45867756 - 45867640
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||||| ||||| ||  ||||||||||||||||||| ||| ||||| ||||||||| | |||||| ||||||||| |||||||||||||| ||||      
T  45867756 aaaattacacttttaatcccttaacttaatttcaggtaacagtttggtcatttatctttttttcatttcaatttggtcttttttgtccatttttatatac 45867657  T
Q  266 atttttaagcttaaaat 282  Q
    ||||| |||||| ||||    
T  45867656 attttcaagcttcaaat 45867640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 166 - 275
Target Start/End: Original strand, 9979311 - 9979421
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtc-ctttttgtccattttcatatg 264  Q
    ||||||||| ||| ||||  ||||||||||||||||||| ||| || |||||||||||| | |||||| |||||||||  ||||| ||||||||||||||    
T  9979311 aaaattacactttaagtcccttaacttaatttcaggtaacagtctgatcctttatctttttttcatttcaatttggtctttttttatccattttcatatg 9979410  T
Q  265 aatttttaagc 275  Q
    ||| |||||||    
T  9979411 aatctttaagc 9979421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 165 - 282
Target Start/End: Original strand, 17173090 - 17173208
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatc-tttatatcattttaatttggtcctttttgtccattttcatat 263  Q
    |||||||||| |||| |||  ||||||||||||||| ||| ||| |||||||||||| ||| | |||||| ||||| |||||||||||||||||||||||    
T  17173090 caaaattacaatttttgtcccttaacttaatttcagataacagtttggtcctttatcttttttttcatttcaatttagtcctttttgtccattttcatat 17173189  T
Q  264 gaatttttaagcttaaaat 282  Q
      ||||| |||||| ||||    
T  17173190 acattttcaagcttcaaat 17173208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 162 - 260
Target Start/End: Complemental strand, 43575365 - 43575267
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttca 260  Q
    ||||||||||||| ||||||||  ||||||||||||||||||| | | ||||||||||||||| | |||||| || ||| ||||||||||| |||||||    
T  43575365 aggcaaaattacacttttagtcccttaacttaatttcaggtaacattttggtcctttatctttttttcatttcaacttgatcctttttgtctattttca 43575267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 247
Target Start/End: Original strand, 21555890 - 21555975
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtccttt 247  Q
    ||||||||||||||||||||||  ||||||||||||||||||| ||| | ||||||||||||| | |||||| | |||||||||||    
T  21555890 aggcaaaattacatttttagtcccttaacttaatttcaggtaacagtttagtcctttatctttttttcatttcagtttggtccttt 21555975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 263
Target Start/End: Original strand, 16860870 - 16860970
Alignment:
Q  157 attaaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccatt 256  Q
    ||||||||||||| |||||||||||| | ||| ||      ||||||| ||| ||||||||||||||| | |||||| ||||||||||||||||||||||    
T  16860870 attaaaggcaaaactacatttttagtgtcttagct------caggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccatt 16860963  T
Q  257 ttcatat 263  Q
    |||||||    
T  16860964 ttcatat 16860970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 163 - 249
Target Start/End: Original strand, 21455582 - 21455668
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtccttttt 249  Q
    |||| ||||||| ||||||||  |||| |||||||||||||| ||| ||||||||||||||| | |||||||||||||||| |||||    
T  21455582 ggcacaattacacttttagtcccttaatttaatttcaggtaacagtttggtcctttatctttttttcattttaatttggtcattttt 21455668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 162 - 304
Target Start/End: Original strand, 41054593 - 41054734
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    |||||||||||||| ||| |||  ||| |||||||| | |||| ||| ||||||||||||||| | |||||  |||||| || |||| ||||||||| ||    
T  41054593 aggcaaaattacatattttgtcccttagcttaattttaagtaatagtttggtcctttatcttttt-tcattacaatttgatcattttggtccatttttat 41054691  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatgg 304  Q
    ||  ||||| |||||| ||||| ||| ||||||||||||||||    
T  41054692 attgattttcaagcttcaaatttatggttttattttcttatgg 41054734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 163 - 282
Target Start/End: Original strand, 44457782 - 44457903
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatat--cattttaatttggtcctttttgtccattttca 260  Q
    |||||||||| | ||||||||  |||| |||||||||||| | ||| ||||||||||||||| | |  ||||| |||||| |||||||||||||||||||    
T  44457782 ggcaaaattatacttttagtcctttaatttaatttcaggttacagtttggtcctttatctttttttttcatttcaatttgatcctttttgtccattttca 44457881  T
Q  261 tatgaatttttaagcttaaaat 282  Q
    |||  ||||| |||||| ||||    
T  44457882 tatacattttcaagcttcaaat 44457903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 160 - 263
Target Start/End: Original strand, 31283156 - 31283254
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttc 259  Q
    ||||||||||||||| ||||||||      |||||||| |||||| ||| || |||||||||||| | |||||| ||||||||||||||| |||||||||    
T  31283156 aaaggcaaaattacacttttagtcc-----cttaattttaggtaacagtttgatcctttatctttttttcatttcaatttggtcctttttatccattttc 31283250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 159 - 263
Target Start/End: Complemental strand, 19125149 - 19125045
Alignment:
Q  159 taaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatc-tttatatcattttaatttggtcctttttgtccattt 257  Q
    |||||| ||||||||| ||| ||||  ||||||||||||||||||| ||| |||||||||||| ||| | |||||| ||||| ||| ||||| |||||||    
T  19125149 taaaggtaaaattacacttt-agtcccttaacttaatttcaggtaacagtttggtcctttatcttttttttcatttcaatttagtcatttttatccattt 19125051  T
Q  258 tcatat 263  Q
    ||||||    
T  19125050 tcatat 19125045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 159 - 260
Target Start/End: Original strand, 27551893 - 27551993
Alignment:
Q  159 taaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccatttt 258  Q
    |||||||||||||| | ||||||||  |||| |||||||||  ||| ||| ||||||||||||||| | | ||||||||||| |||||||| ||||||||    
T  27551893 taaaggcaaaattaaagttttagtcccttaatttaatttcaaataacagtttggtcctttatcttt-ttttattttaatttgatcctttttatccatttt 27551991  T
Q  259 ca 260  Q
    ||    
T  27551992 ca 27551993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 164 - 282
Target Start/End: Complemental strand, 49114588 - 49114466
Alignment:
Q  164 gcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatc----tttatatcattttaatttggtcctttttgtccattttc 259  Q
    ||||||||||| ||||| ||  |||| |||||||||||||| ||| ||||||||||||    ||| | | |||||||||||||| ||||| ||||||||     
T  49114588 gcaaaattacacttttactcccttaatttaatttcaggtaacagtttggtcctttatctttttttttttaattttaatttggtcatttttatccattttt 49114489  T
Q  260 atatgaatttttaagcttaaaat 282  Q
    ||||| ||||| |||||| ||||    
T  49114488 atatgcattttcaagcttcaaat 49114466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 361
Target Start/End: Original strand, 48765882 - 48766056
Alignment:
Q  187 taacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatgaatttttaag-cttaaaattca 285  Q
    ||||||||||| |||||| ||| || || ||||||||| | || ||  ||||| ||||||||  | ||||| |||||| ||||| ||  ||| |||||||    
T  48765882 taacttaatttaaggtaacagtttgctc-tttatctttttttcgttgcaattttgtccttttgattcatttgcatatggattttcaaatcttcaaattca 48765980  T
Q  286 tgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    || ||||||||||||||||   || | ||||||||| |||| || || ||||| ||| ||||||||||||||||||    
T  48765981 tggttttattttcttatggcatttcaatcttcaaatttatggtcttcatctatttttacataagaatattagattt 48766056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 177 - 258
Target Start/End: Complemental strand, 23036948 - 23036866
Alignment:
Q  177 tttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatat-cattttaatttggtcctttttgtccatttt 258  Q
    |||||||  |||| |||||||||| ||| ||| ||||||||||||||| | | ||||||||||||||||||||| ||||||||    
T  23036948 tttagtcccttaatttaatttcagataacagtttggtcctttatcttttttttcattttaatttggtcctttttatccatttt 23036866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 161 - 250
Target Start/End: Original strand, 43699920 - 43700010
Alignment:
Q  161 aaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatc-tttatatcattttaatttggtcctttttg 250  Q
    |||| ||||||||| ||||||||  |||||||||||| || ||| ||| |||||||||||| ||| | |||||| ||||||||||||||||    
T  43699920 aaggaaaaattacacttttagtcccttaacttaattttagataacagtttggtcctttatcttttttttcatttcaatttggtcctttttg 43700010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 282
Target Start/End: Complemental strand, 48766174 - 48766053
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaag-agtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttca 260  Q
    ||||||||||||| ||||||||  ||||||||||||  || ||  ||| | ||||||||||||| | | |||| ||||| |||||||| |||||||||||    
T  48766174 aggcaaaattacacttttagtcccttaacttaatttatgggaaacagtttagtcctttatctttttttaatttcaattttgtccttttggtccattttca 48766075  T
Q  261 tatgaatttttaagcttaaaat 282  Q
    |||  ||||||| |||| ||||    
T  48766074 tatagatttttacgcttcaaat 48766053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 270
Target Start/End: Complemental strand, 41054861 - 41054801
Alignment:
Q  210 tggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatgaatttt 270  Q
    ||||||||||||||| | ||||||||||||  ||||||| ||||||||| |||||||||||    
T  41054861 tggtcctttatctttttttcattttaattttatccttttggtccatttttatatgaatttt 41054801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 49023843 - 49023792
Alignment:
Q  212 gtcctttatctttatatcattttaatttggtcctttttgtccattttcatat 263  Q
    ||||||||||||| | |||||| |||||||||||||||||||||||| ||||    
T  49023843 gtcctttatctttttttcatttcaatttggtcctttttgtccatttttatat 49023792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 31116103 - 31116049
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtc 214  Q
    ||||||||||||| ||||||||||  ||||||||||||||||||| ||| |||||    
T  31116103 aaaggcaaaattatatttttagtccattaacttaatttcaggtaacagtttggtc 31116049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 160 - 263
Target Start/End: Complemental strand, 11682237 - 11682136
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttc 259  Q
    ||||| ||||||| | ||||||||  ||||||||||||||| ||| | | | || |||||||||| | | ||||||||||| || |||||||||||||||    
T  11682237 aaaggaaaaattatacttttagtcc-ttaacttaatttcagataacaatttagttctttatcttttttt-attttaatttgatcttttttgtccattttc 11682140  T
Q  260 atat 263  Q
    ||||    
T  11682139 atat 11682136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 163 - 282
Target Start/End: Complemental strand, 19104587 - 19104468
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||||||| ||||  ||||||||||||||||||| |   || ||||||| |||| | | |||| ||||||||| ||||  || ||||||| |    
T  19104587 ggcaaaattacattttcagtcctttaacttaatttcaggtaacaacttgatcctttagctttttttgatttcaatttggtctttttcatctattttcaaa 19104488  T
Q  263 tgaatttttaagcttaaaat 282  Q
    |  ||||| |||||| ||||    
T  19104487 tacattttcaagcttcaaat 19104468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 204
Target Start/End: Original strand, 32165225 - 32165266
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaa 204  Q
    |||||||||||| ||||||||  |||||||||||||||||||    
T  32165225 ggcaaaattacacttttagtccattaacttaatttcaggtaa 32165266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 282
Target Start/End: Complemental strand, 46738508 - 46738459
Alignment:
Q  233 ttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaat 282  Q
    ||||||||||| |||||||||||||| ||||| ||||| |||||| ||||    
T  46738508 ttaatttggtcatttttgtccatttttatatgcattttcaagcttcaaat 46738459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 160; Significance: 3e-85; HSPs: 56)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 162 - 361
Target Start/End: Original strand, 22568762 - 22568961
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    |||||||||||| |||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| |||||||||||||||||||||||||||    
T  22568762 aggcaaaattacttttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcat 22568861  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22568862 atgaatttttaagcttaaaattcatgattttattttcttatggtccttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 22568961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 161 - 361
Target Start/End: Original strand, 20027771 - 20027971
Alignment:
Q  161 aaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttca 260  Q
    |||| ||||||| ||||||||||  ||||||||||||||||||| ||| || || ||||||||| | |||||| ||||||||||||||||||||||||||    
T  20027771 aaggaaaaattatatttttagtccattaacttaatttcaggtaacagtttgatcttttatctttttttcatttcaatttggtcctttttgtccattttca 20027870  T
Q  261 tatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagatt 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20027871 tatgaatttttaagcttaaaattcatgattttattttcttatggtccttgagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagatt 20027970  T
Q  361 t 361  Q
    |    
T  20027971 t 20027971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 161 - 361
Target Start/End: Original strand, 9899193 - 9899393
Alignment:
Q  161 aaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttca 260  Q
    |||||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| ||||||||||||||||||||||||||    
T  9899193 aaggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttca 9899292  T
Q  261 tatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagatt 360  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||| || | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9899293 tatgaatttttaagtttaaaattcatgattttattttcttatagtctttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatt 9899392  T
Q  361 t 361  Q
    |    
T  9899393 t 9899393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 162 - 361
Target Start/End: Complemental strand, 17853958 - 17853759
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| ||||||||  ||||||||||||||| ||| ||| ||||||||||||||| | |||||| |||||||||||||||||||||||||||    
T  17853958 aggcaaaattacacttttagtcccttaacttaatttcagataacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcat 17853859  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  17853858 atgaatttttaagcttaaaattcatgattttattttcttatggtctttcaatcttcaaatctatgatcctcgtctatgtttgcatatgaatattagattt 17853759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 163 - 361
Target Start/End: Complemental strand, 9546725 - 9546527
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  ||||||||||||||||||| ||| || |||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  9546725 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttgatcctttatctttttttcatttcaatttggtcctttttgtccattttcata 9546626  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  9546625 tgaatttttaagcttaaaattcatgattttattttcttatggtctttcaatcttcaaatctatgattctcgtctatgtttgcataagaatattagattt 9546527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 163 - 361
Target Start/End: Complemental strand, 21926377 - 21926180
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  21926377 ggcaaaattacatttttagtct-ttaacttaatttcaggtaacagtttggtcctttatctttttttcattttaatttggtcctttttgtccattttcata 21926279  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||| |||||||||||||||||||||||||||||||| || | ||||||||||||| |||||| | ||||||||||||||||||||||||||    
T  21926278 tgaatttttaaacttaaaattcatgattttattttcttatggtctttcaatcttcaaatctattatcctcatttatgtttgcataagaatattagattt 21926180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 161 - 361
Target Start/End: Complemental strand, 3105920 - 3105720
Alignment:
Q  161 aaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttca 260  Q
    |||| |||||| || ||||||||  |||| |||||||||||||| ||| ||||||||||||||| | |||||| ||||||||||||||||||||||||||    
T  3105920 aaggtaaaattgcacttttagtcccttaatttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttca 3105821  T
Q  261 tatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagatt 360  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3105820 tatgaatttttaagtttaaaattcatgattttattttcttatggtccttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatgttagatt 3105721  T
Q  361 t 361  Q
    |    
T  3105720 t 3105720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 166 - 361
Target Start/End: Complemental strand, 685264 - 685069
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||||| ||||||||| ||||||||||||||||||| ||| | ||||||||||||| | |||||| |||||||||||||||||||||||||||||||    
T  685264 aaaattacacttttagtctcttaacttaatttcaggtaacagtttagtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatga 685165  T
Q  266 atttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||||||||||||||||| |||||||||| ||| || | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  685164 atttttaagcttaaaattcatgatttcattttcttatagtctttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 685069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 163 - 361
Target Start/End: Original strand, 28852188 - 28852386
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  |||||||||||| |||||| ||| ||||||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  28852188 ggcaaaattacacttttagtcccttaacttaattttaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcata 28852287  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |  ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  28852288 tacatttttaagcttaaaattcatgattttattttcttatggtctttcagtcttcaaatctatgatcctcgtctatgtttgcataaaaatattagattt 28852386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 165 - 361
Target Start/End: Original strand, 9220105 - 9220301
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatg 264  Q
    |||||||||| ||||||||  ||||||||||||||||||| ||| || |||||||||||| | |||||| ||||||||||||||||||||||||||||||    
T  9220105 caaaattacacttttagtcccttaacttaatttcaggtaacagtttgatcctttatctttttttcatttcaatttggtcctttttgtccattttcatatg 9220204  T
Q  265 aatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||| ||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9220205 aatttttaagtttaaaattcatgattttattttcttatggtctttcaatcttcaaatctatgatcctcgtctatgtttgcataagagtattagattt 9220301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 162 - 361
Target Start/End: Original strand, 1925115 - 1925314
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| ||||||||  ||||||||||||||||||| ||| | ||||||||||||| | |||||| |||||||||||||||||||||||||||    
T  1925115 aggcaaaattacacttttagtcccttaacttaatttcaggtaaaagtttagtcctttatctttttttcatttcaatttggtcctttttgtccattttcat 1925214  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  1925215 atgaatttttaagtttaaaattcatgattttattttcttatggtctttcaatcttcaaatctatgatcctcgtctatttttgcataagaatgttagattt 1925314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 167 - 361
Target Start/End: Original strand, 2316493 - 2316687
Alignment:
Q  167 aaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatgaa 266  Q
    |||||| ||||||||||  |||| |||||||||||||| ||| | ||||||||||||| | |||||| ||||||||||||||||||||||||||||||||    
T  2316493 aaattatatttttagtcccttaatttaatttcaggtaatagtttagtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatgaa 2316592  T
Q  267 tttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  2316593 tttttaagcttaaaattcatgattttattttcttatggtctttcagtcttcaaatctattatcctcttctatgtttgcataagaatattagattt 2316687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 159 - 361
Target Start/End: Complemental strand, 2883201 - 2882999
Alignment:
Q  159 taaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccatttt 258  Q
    |||||| ||| ||||||||||| ||  |||| |||||||||||||| ||| ||||||||||||||| | |||||||||||||||||||||| ||||||||    
T  2883201 taaaggtaaagttacatttttaatcacttaatttaatttcaggtaatagtttggtcctttatctttttttcattttaatttggtcctttttatccatttt 2883102  T
Q  259 catatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattaga 358  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||| |||||||| ||||||||||||||    
T  2883101 catatgaatttttaagcttaaaattaatgattttattttcttatggtctttcagtcttcaaatctatgatcctcgtttatgtttggataagaatattaga 2883002  T
Q  359 ttt 361  Q
    |||    
T  2883001 ttt 2882999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 163 - 361
Target Start/End: Complemental strand, 25121811 - 25121613
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| |  ||||| ||||||||||||||||||||||||||||    
T  25121811 ggcaaaattacacttttagtcctttaacttaatttcaggtaacagtttggtcctttatcttttttgcatttcaatttggtcctttttgtccattttcata 25121712  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||| |||||||| ||||||||||||||||||||||||||||||| || | ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  25121711 tgattttttaagtttaaaattcatgattttattttcttatggtctttcaatcttcaaatctatgatcatcgtctatgtttgcataagaatattagattt 25121613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 162 - 361
Target Start/End: Complemental strand, 13178538 - 13178339
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| ||||||||  |||||||||||| |||||| | | ||||||||||||||| | |||||| |||||||| ||||||||||||||||||    
T  13178538 aggcaaaattacagttttagtcccttaacttaattttaggtaacattttggtcctttatctttttttcatttcaatttggttctttttgtccattttcat 13178439  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||  |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  13178438 atacatttttaagcttaaaattcatgattttattttcttatgatcttttagtcttcaaatctatgatcatcgtctatgtttgcataagaatattagattt 13178339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 160 - 361
Target Start/End: Original strand, 8129529 - 8129731
Alignment:
Q  160 aaaggcaaaattacattttta-gtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccatttt 258  Q
    ||||| ||||||||| ||||| |||| ||||||||||||||| ||| ||| ||||||||||||||  | | |||||||||||||||||||||||||| ||    
T  8129529 aaaggtaaaattacacttttaagtcttttaacttaatttcagataacagtttggtcctttatcttctttttattttaatttggtcctttttgtccatgtt 8129628  T
Q  259 catatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattaga 358  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||||    
T  8129629 catatgaaattttaagcttaaaattcatgattttattttcttatggtctttcagtcttcaaatctatgattctcgtctatgtttgcataagaatattaga 8129728  T
Q  359 ttt 361  Q
    |||    
T  8129729 ttt 8129731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 166 - 361
Target Start/End: Complemental strand, 13853452 - 13853258
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||||| ||||||||  | ||||||||||||||||| ||| ||||| ||||||||| | |||||| ||||||||| |||||||| ||||||||||||    
T  13853452 aaaattacacttttagtccct-aacttaatttcaggtaacagtttggtcttttatctttttttcatttcaatttggtcttttttgtctattttcatatga 13853354  T
Q  266 atttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||||||||||||||||||||||||| || | ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  13853353 atttttaagcttaaaattcatgattttattttcttatggtctttcaatcttcaaatatatgatcctcgtctatgtttgcataagaatattagattt 13853258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 163 - 361
Target Start/End: Complemental strand, 24325307 - 24325108
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatat-cattttaatttggtcctttttgtccattttcat 261  Q
    |||||||||||| ||||| ||  ||||||||||||||||||| ||| ||||||||||||||| | | ||||||||| |||||||||||||||||||||||    
T  24325307 ggcaaaattacacttttaatcccttaacttaatttcaggtaacagtttggtcctttatcttttttttcattttaatatggtcctttttgtccattttcat 24325208  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||| ||   |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  24325207 atgaatttttaagcttaaagttcatgattttattttcttatagtctttctatctttaaatctatgatcctcgtctatgtttgcataagaatattagattt 24325108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 158 - 342
Target Start/End: Complemental strand, 1137064 - 1136879
Alignment:
Q  158 ttaaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattt 257  Q
    ||||||||||||||||| ||||||||  ||| ||||||||||| ||| ||| ||||||||||||||| | |||||| |||||||||||||||||||||||    
T  1137064 ttaaaggcaaaattacaattttagtcccttagcttaatttcagttaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattt 1136965  T
Q  258 tcatatgaatttttaagcttaaaattcatgattttattttcttatggtccttt-agtcttcaaatctatgatcctcgtctatgttt 342  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  1136964 tcatatgaaattttaagtttaaaattcatgattttattttcttatggtcttttcagtcttcaaatctatgatcctcgtctatgttt 1136879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 164 - 361
Target Start/End: Original strand, 12240481 - 12240679
Alignment:
Q  164 gcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatat 263  Q
    ||||||||||| ||||||||| |||||||||||| |||||| ||| || |||||||||||| | | |||| |||| | ||||||||||||||||||||||    
T  12240481 gcaaaattacacttttagtcttttaacttaattttaggtaacagtttgatcctttatcttttttttatttcaattcgatcctttttgtccattttcatat 12240580  T
Q  264 gaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatg-atcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||||||||||||| ||||||||| ||| || |||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  12240581 gaatttttaagcttaaaattcatgattttgttttcttattgtctttcagtcttcaaatctatgaatcctcgtctatgtttacataagaatattagattt 12240679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 163 - 348
Target Start/End: Original strand, 24335533 - 24335720
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatat--cattttaatttggtcctttttgtccattttca 260  Q
    |||||||||||| ||||||||| |||| |||||||||||||| | | ||||||||||| ||| | |  ||||||||||||||| ||||||||||||||||    
T  24335533 ggcaaaattacacttttagtctcttaatttaatttcaggtaacaatttggtcctttattttttttttccattttaatttggtcatttttgtccattttca 24335632  T
Q  261 tatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataa 348  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||| ||||||||||||| ||||    
T  24335633 tatgaatttttaagcttaaaattcatgattttattttcttacggtccttcagtcttgaaatctatgatcatcgtctatgtttgtataa 24335720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 159 - 361
Target Start/End: Complemental strand, 2863898 - 2863696
Alignment:
Q  159 taaaggcaaaattacatttttagtctgttaa-cttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattt 257  Q
    |||| ||||| ||||| ||||||||  |||| |||||||||||||||  || ||||||| ||| ||| | |||||| |||||||||||||||||||||||    
T  2863898 taaaagcaaagttacacttttagtcacttaaacttaatttcaggtaaccgtttggtcctatatattttt-tcatttcaatttggtcctttttgtccattt 2863800  T
Q  258 tcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattag 357  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||| |||||||| |||| ||||||||    
T  2863799 tcatatgaatttttaagcttaaaattcatgatttaattttcttatggtctttcagtcttcaaatctatgatcctcgtttatgtttggataataatattag 2863700  T
Q  358 attt 361  Q
    ||||    
T  2863699 attt 2863696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 159 - 331
Target Start/End: Original strand, 11361785 - 11361957
Alignment:
Q  159 taaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccatttt 258  Q
    |||||||||||||||| ||||||||| |||| |||||||||||||| ||| | ||| ||||||||| | ||||||||||||| ||||||||||| |||||    
T  11361785 taaaggcaaaattacacttttagtctcttaatttaatttcaggtaacagtttagtcatttatctttttttcattttaatttgttcctttttgtcaatttt 11361884  T
Q  259 catatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcct 331  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||| |||||||||||    
T  11361885 catatgaatttttaagcttaaaattcatgattttattttcttatggtctttcaatcttcaattctatgatcct 11361957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 151 - 355
Target Start/End: Original strand, 14655064 - 14655268
Alignment:
Q  151 tgtttaattaaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttg 250  Q
    ||||||||| | | |||||||||| ||||||||  ||||||| |||| |||||| ||| ||||||||||||||||| | |||| ||||| ||||||||      
T  14655064 tgtttaatttatgacaaaattacacttttagtcccttaactttattttaggtaacagtttggtcctttatctttatttaatttcaattttgtccttttga 14655163  T
Q  251 tccattttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataaga 350  Q
    |||||||  ||||||||||||||| |||||||| |||||||||||||||||||||| || ||||||||||| |||  |||| ||||||||||||||||||    
T  14655164 tccatttatatatgaatttttaagtttaaaattaatgattttattttcttatggtctttcagtcttcaaatttatattccttgtctatgtttgcataaga 14655263  T
Q  351 atatt 355  Q
    |||||    
T  14655264 atatt 14655268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 191 - 361
Target Start/End: Complemental strand, 8488150 - 8487978
Alignment:
Q  191 ttaatttcaggtaagagtgtggtcctttatctttatatc--attttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaattcatga 288  Q
    ||||||| |||||| ||| ||||||||||||||| | |   |||| |||||  |||||||  ||||||| ||||||||||||||||||||||||||||||    
T  8488150 ttaattttaggtaacagtttggtcctttatcttttttttttatttcaattttatccttttgatccatttacatatgaatttttaagcttaaaattcatga 8488051  T
Q  289 ttttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||||| ||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  8488050 ttttattttcttattgtctttcagtcttcaaatatatgatcctcgtctatgtttgcataagaatattagattt 8487978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 158 - 361
Target Start/End: Complemental strand, 24896492 - 24896288
Alignment:
Q  158 ttaaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatat-cattttaatttggtcctttttgtccatt 256  Q
    ||||||||||||||||| |||| |||  ||||||| |||| |||||| ||| | ||| ||||||||| | | ||||| ||||| ||| ||||  ||||||    
T  24896492 ttaaaggcaaaattacacttttggtcccttaactttattttaggtaacagtttagtcatttatcttttttttcatttcaattttgtcattttgatccatt 24896393  T
Q  257 ttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatatta 356  Q
    | ||||||||| ||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||| | || |||||||||||||||||||||    
T  24896392 tacatatgaatgtttaatcttaaaattcatgattttattttcttatggtctttcagtcttcaaatctatgatctttgtttatgtttgcataagaatatta 24896293  T
Q  357 gattt 361  Q
     ||||    
T  24896292 aattt 24896288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 231 - 361
Target Start/End: Complemental strand, 3012159 - 3012029
Alignment:
Q  231 ttttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcc 330  Q
    ||||||||||||  |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||  || | | |||||||||||||||     
T  3012159 ttttaatttggttatttttgtccatttttatatgaatttttaagtttaaaattcatgattttattttcttatggtttttcaattttcaaatctatgatct 3012060  T
Q  331 tcgtctatgtttgcataagaatattagattt 361  Q
    || ||||||||||||||||||||||||||||    
T  3012059 tcatctatgtttgcataagaatattagattt 3012029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 21926057 - 21926183
Alignment:
Q  156 aattaaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccat 255  Q
    ||||||||||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||| ||| | |||||| ||||||||||||||| |||||    
T  21926057 aattaaaggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatatttttttcatttcaatttggtcctttttctccat 21926156  T
Q  256 tttcatatgaatttttaagcttaaaat 282  Q
    |||||||||||||||||||||| ||||    
T  21926157 tttcatatgaatttttaagcttcaaat 21926183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 3105607 - 3105723
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||||||||||||||| |||||||||||||||||||  || ||||||||||||||| | |||||| |||||||||||||||||||||||||||||      
T  3105607 aaaattacatttttagtctcttaacttaatttcaggtaactgtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatac 3105706  T
Q  266 atttttaagcttaaaat 282  Q
    ||||| |||||| ||||    
T  3105707 attttcaagcttcaaat 3105723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 149 - 263
Target Start/End: Complemental strand, 9899523 - 9899409
Alignment:
Q  149 tttgtttaattaaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttt 248  Q
    |||||||||  | ||||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| ||||||||||||||    
T  9899523 tttgtttaaaaataggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttt 9899424  T
Q  249 tgtccattttcatat 263  Q
    |||||||||| ||||    
T  9899423 tgtccatttttatat 9899409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 162 - 282
Target Start/End: Complemental strand, 2316804 - 2316684
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| |||||| |||||||||||| |||||||    
T  2316804 aggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttgatcctttttgtcctttttcat 2316705  T
Q  262 atgaatttttaagcttaaaat 282  Q
    ||  ||||| |||||| ||||    
T  2316704 atacattttcaagcttcaaat 2316684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 158 - 282
Target Start/End: Complemental strand, 8129852 - 8129728
Alignment:
Q  158 ttaaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattt 257  Q
    |||||||||||||||||  |||| ||  ||||||||||||||||||| ||| ||||| ||||||||| | |||||| |||||||||||||||||||||||    
T  8129852 ttaaaggcaaaattacacatttaatcccttaacttaatttcaggtaacagtttggtcatttatctttttttcatttcaatttggtcctttttgtccattt 8129753  T
Q  258 tcatatgaatttttaagcttaaaat 282  Q
    ||||||  ||||| |||||| ||||    
T  8129752 tcatatacattttcaagcttcaaat 8129728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 22569074 - 22568958
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||||| ||||||||  |||||||||||| |||||| ||| ||||||||||||||| | |||||| |||||||||||||||||||||||||||||      
T  22569074 aaaattacacttttagtcccttaacttaattttaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatac 22568975  T
Q  266 atttttaagcttaaaat 282  Q
    ||||| |||||| ||||    
T  22568974 attttcaagcttcaaat 22568958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 163 - 282
Target Start/End: Original strand, 2882883 - 2883002
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| ||||| ||| ||||||||||||||||||    
T  2882883 ggcaaaattacaattttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttagtcatttttgtccattttcata 2882982  T
Q  263 tgaatttttaagcttaaaat 282  Q
    |  ||||| |||||| ||||    
T  2882983 tacattttcaagcttcaaat 2883002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 163 - 282
Target Start/End: Complemental strand, 9220417 - 9220298
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||| ||| ||||||||||||||||||||||| ||||| ||||||||| | |||||| |||||||||||||||||| ||||| |||    
T  9220417 ggcaaaattacacttttaatctcttaacttaatttcaggtaagagtttggtcttttatctttttttcatttcaatttggtcctttttgtctatttttata 9220318  T
Q  263 tgaatttttaagcttaaaat 282  Q
    |  ||||| |||||| ||||    
T  9220317 tacattttcaagcttcaaat 9220298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 161 - 282
Target Start/End: Original strand, 13853140 - 13853261
Alignment:
Q  161 aaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttca 260  Q
    |||||||||||| ||||||||||  ||||||||||||||||||| | | ||||| ||||||||| | |||||| |||||||||||||||||||||||| |    
T  13853140 aaggcaaaattatatttttagtcccttaacttaatttcaggtaacaatttggtcatttatctttttttcatttcaatttggtcctttttgtccattttta 13853239  T
Q  261 tatgaatttttaagcttaaaat 282  Q
    |||  ||||| |||||| ||||    
T  13853240 tatacattttcaagcttcaaat 13853261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 162 - 277
Target Start/End: Original strand, 7279552 - 7279668
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatat-cattttaatttggtcctttttgtccattttca 260  Q
    ||||||||||||| ||||||| | |||||||||||||| |||| ||| || || ||||| ||| | | |||||||||||| |||||||||||||||||||    
T  7279552 aggcaaaattacacttttagtttcttaacttaatttcaagtaacagtttgatcatttattttttttttcattttaatttgttcctttttgtccattttca 7279651  T
Q  261 tatgaatttttaagctt 277  Q
    |||||||||||||||||    
T  7279652 tatgaatttttaagctt 7279668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 163 - 263
Target Start/End: Complemental strand, 12240795 - 12240695
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||| ||||||| ||||||||| ||||||||||||||||||| ||| ||||||||||||||| | |||||| |||||| || ||||||||||||||||||    
T  12240795 ggcagaattacacttttagtctcttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttgatcatttttgtccattttcata 12240696  T
Q  263 t 263  Q
    |    
T  12240695 t 12240695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 161 - 282
Target Start/End: Original strand, 9546408 - 9546530
Alignment:
Q  161 aaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatc-tttatatcattttaatttggtcctttttgtccattttc 259  Q
    |||||||||||||| ||||||||  ||||||||||||||||||| ||| ||||| |||||| ||| | |||||| ||||||||||||||||||||||||     
T  9546408 aaggcaaaattacaattttagtcccttaacttaatttcaggtaacagtttggtcttttatcttttttttcatttcaatttggtcctttttgtccattttt 9546507  T
Q  260 atatgaatttttaagcttaaaat 282  Q
    ||||  ||||| |||||| ||||    
T  9546508 atatacattttcaagcttcaaat 9546530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 164 - 282
Target Start/End: Original strand, 24324993 - 24325111
Alignment:
Q  164 gcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatat 263  Q
    ||||||||||| ||||||||  ||||||||||||||||||| | | ||| ||||||||||| | |||||| |||||||||||||||||||||||| ||||    
T  24324993 gcaaaattacacttttagtcctttaacttaatttcaggtaacaatttggccctttatctttttttcatttcaatttggtcctttttgtccatttttatat 24325092  T
Q  264 gaatttttaagcttaaaat 282  Q
      ||||| |||||| ||||    
T  24325093 acattttcaagcttcaaat 24325111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 163 - 282
Target Start/End: Original strand, 3011912 - 3012032
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcc-tttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    |||||||||| | ||||||||| ||||||||||||||||||| ||| |||||| ||||||||| | |||||| ||||| |||||||||||||||||| ||    
T  3011912 ggcaaaattatacttttagtctcttaacttaatttcaggtaacagtttggtccttttatctttttttcatttcaattttgtcctttttgtccatttttat 3012011  T
Q  262 atgaatttttaagcttaaaat 282  Q
    ||  ||||| |||||| ||||    
T  3012012 atacattttcaagcttcaaat 3012032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 20028084 - 20027968
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||||  ||||||||| ||||||||||||||||||| ||| ||||| ||||||||| | || ||| |||||||||||||||||||||||| ||||      
T  20028084 aaaattacgcttttagtctcttaacttaatttcaggtaacagtttggtcttttatctttttttcgtttcaatttggtcctttttgtccattttaatatac 20027985  T
Q  266 atttttaagcttaaaat 282  Q
    ||||| |||||| ||||    
T  20027984 attttcaagcttcaaat 20027968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 160 - 282
Target Start/End: Original strand, 684950 - 685072
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttc 259  Q
    ||||| ||||||||| ||||||||  ||||||||||||||| ||| | | ||||||||||||||| | |||||| |||||||| |||||||||||||||     
T  684950 aaaggtaaaattacacttttagtcccttaacttaatttcagataacaatttggtcctttatctttttttcatttcaatttggttctttttgtccattttt 685049  T
Q  260 atatgaatttttaagcttaaaat 282  Q
    ||||  ||||| |||||| ||||    
T  685050 atatacattttcaagcttcaaat 685072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 163 - 258
Target Start/End: Original strand, 2863580 - 2863676
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatct-ttatatcattttaatttggtcctttttgtccatttt 258  Q
    |||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||| || | |||||| ||||| ||||||||||||||||||    
T  2863580 ggcaaaattacaattttagtcccttaacttaatttcaggtaacagtttggtcctttatctgttttttcatttcaatttagtcctttttgtccatttt 2863676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 176 - 282
Target Start/End: Original strand, 17853656 - 17853762
Alignment:
Q  176 ttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatgaatttttaagc 275  Q
    ||||||||  |||| |||||||||||||| ||| ||||| ||||||||| | |||||| |||||||||||||||||||||||| ||||  ||||| ||||    
T  17853656 ttttagtcccttaaattaatttcaggtaacagtttggtcttttatctttttttcatttcaatttggtcctttttgtccatttttatatacattttcaagc 17853755  T
Q  276 ttaaaat 282  Q
    || ||||    
T  17853756 ttcaaat 17853762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 166 - 258
Target Start/End: Complemental strand, 11362091 - 11361999
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccatttt 258  Q
    ||||||||| |||| |||  ||||||||||||||| ||| | | ||||||||||||||| | |||||| ||||||||||||||||||||||||    
T  11362091 aaaattacacttttcgtcccttaacttaatttcagataacaatttggtcctttatctttttttcatttcaatttggtcctttttgtccatttt 11361999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 13178224 - 13178342
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| ||||||||| ||||||||||||||  ||| | | ||||| ||||||||| | |||||| ||||||||| |||||||||||||||||    
T  13178224 aggcaaaattacacttttagtcttttaacttaatttcaa-taacaatttggtcttttatcttttt-tcatttcaatttggtcttttttgtccattttcat 13178321  T
Q  262 atgaatttttaagcttaaaat 282  Q
    ||  ||||| |||||| ||||    
T  13178322 atacattttcaagcttcaaat 13178342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 8487863 - 8487981
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatc--attttaatttggtcctttttgtccattttcatat 263  Q
    ||||||||||||||||||  |||||||||||||| |||| ||| ||||||||||| ||| | |   |||| || ||||||||||||||||||||||||||    
T  8487863 aaaattacatttttagtcccttaacttaatttcatgtaacagtttggtcctttattttttttttttatttcaacttggtcctttttgtccattttcatat 8487962  T
Q  264 gaatttttaagcttaaaat 282  Q
      ||||| |||||| ||||    
T  8487963 acattttcaagcttcaaat 8487981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 162 - 277
Target Start/End: Original strand, 27820658 - 27820773
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| || |||||  |||| |||||||||||||| ||| || |||||||||||| | |||||| ||||||||| ||||| |||||||| ||    
T  27820658 aggcaaaattacacttctagtcccttaagttaatttcaggtaacagtttgatcctttatctttttttcatttcaatttggtcatttttatccatttttat 27820757  T
Q  262 atgaatttttaagctt 277  Q
    ||  ||||| ||||||    
T  27820758 atacattttcaagctt 27820773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 263
Target Start/End: Complemental strand, 28852497 - 28852402
Alignment:
Q  168 aattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatat 263  Q
    ||||||||||||||||| |||| ||||||| |||||| ||| || || ||||||||| | |||||| ||||||| |||||||||| ||||||||||    
T  28852497 aattacatttttagtctcttaaattaattttaggtaacagtttgatcttttatctttttttcatttcaatttggacctttttgtctattttcatat 28852402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 241 - 361
Target Start/End: Complemental strand, 25026212 - 25026091
Alignment:
Q  241 gtcctttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttctt-atggtcctttagtcttcaaatctatgatcctcgtctatg 339  Q
    |||||||||| |||||| |||||  ||||| |||||||||||||||| ||| ||||| || |||| |  | | ||||||||| || ||||||||||||||    
T  25026212 gtcctttttgaccatttgcatatagattttcaagcttaaaattcatgttttaattttttttatggcctctcaatcttcaaatataggatcctcgtctatg 25026113  T
Q  340 tttgcataagaatattagattt 361  Q
    ||||||||  ||||||||||||    
T  25026112 tttgcatataaatattagattt 25026091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 160 - 304
Target Start/End: Complemental strand, 32557454 - 32557308
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatc--attttaatttggtcctttttgtccattt 257  Q
    ||||| ||||||||| ||||||||  |||||||||||| |||||| | | ||||||||||||||| | |   |||| |||||  |||||||  |||||||    
T  32557454 aaagggaaaattacaattttagtcccttaacttaattttaggtaacaatttggtcctttatcttttttttttatttcaattttatccttttgatccattt 32557355  T
Q  258 tcatatgaatttttaagcttaaaattcatgattttattttcttatgg 304  Q
     |||||||||||| |||||| | ||| ||| ||||||||||| ||||    
T  32557354 gcatatgaattttcaagctttagatttatgcttttattttctcatgg 32557308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 226
Target Start/End: Complemental strand, 1925468 - 1925402
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttat 226  Q
    ||||||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||| |||||    
T  1925468 aaaggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatttttat 1925402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 210 - 283
Target Start/End: Complemental strand, 14655344 - 14655270
Alignment:
Q  210 tggtcctttatctttatat-cattttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaatt 283  Q
    ||||||||||||||| | | ||||| |||||||||||||||||||||||||||||  ||||| |||||| |||||    
T  14655344 tggtcctttatcttttttttcatttcaatttggtcctttttgtccattttcatatacattttcaagcttcaaatt 14655270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 283
Target Start/End: Original strand, 24896222 - 24896292
Alignment:
Q  213 tcctttatctttatatcattttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaatt 283  Q
    |||||||||||| | |||||||||||||||| ||||||| |||||||||||  ||||| |||||| |||||    
T  24896222 tcctttatctttttttcattttaatttggtcatttttgttcattttcatatacattttcaagcttcaaatt 24896292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 25121525 - 25121581
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtccttt 218  Q
    |||||||||||||  |||||||| ||||||||||||||||||| | | |||||||||    
T  25121525 aggcaaaattacacgtttagtctcttaacttaatttcaggtaacaatttggtccttt 25121581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 156; Significance: 8e-83; HSPs: 91)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 162 - 361
Target Start/End: Complemental strand, 17504358 - 17504159
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||||||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| ||||||||| |||||||||||||||||    
T  17504358 aggcaaaattacatttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcatttttgtccattttcat 17504259  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  17504258 atgaatttttaagcttaaaattcatgattttattttcttatggtctttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 17504159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 163 - 359
Target Start/End: Original strand, 50312006 - 50312201
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||||||||||||| |||| |||||||||||||| ||| ||||| ||||| ||| | | |||||||||||||||||||||||||||||||||    
T  50312006 ggcaaaattacatttttagtctcttaatttaatttcaggtaacagtttggtcatttattttttttt-attttaatttggtcctttttgtccattttcata 50312104  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagat 359  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  50312105 tgaatttttaagcttaaaattcatgattttattttcttatggtcttttagtcttcaaatctatgatcctcgtctatggttgcataagaatattagat 50312201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 162 - 361
Target Start/End: Complemental strand, 8853410 - 8853211
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||| ||| | |||||| |||||||||||||||||||||||||||    
T  8853410 aggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatttttttttcatttcaatttggtcctttttgtccattttcat 8853311  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8853310 atgaacttttaagcttaaaattcatgattttattttcttatggtcattcagtcttcaaatctatgatcctcgtctatgtttacataagaatattagattt 8853211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 162 - 361
Target Start/End: Original strand, 45286231 - 45286430
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| ||||||||| ||||||||||||||||||| | | ||||||||||||||| | |||||| |||||||||||||||||||||||||||    
T  45286231 aggcaaaattacacttttagtctcttaacttaatttcaggtaacaatttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcat 45286330  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| || | ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  45286331 atgaatttttaagcttaaaattcatgattttattttcttatcgtctttcaatcttcaaatatatgatcctcgtctatgtttgcataagaatattagattt 45286430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 163 - 361
Target Start/End: Complemental strand, 5618385 - 5618187
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||| ||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  5618385 ggcaaagttacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcata 5618286  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  5618285 tgaatttttaagcttaaaattcatgattttattttcttatggtctttcagtcttcaaatctatgatcctcgtttatgtttggataagaatattagattt 5618187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 163 - 361
Target Start/End: Original strand, 9877404 - 9877601
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||   || ||| |||||| |||||||||||||||||||||    
T  9877404 ggcaaaattacatttttagtctcttaacttaatttcaggtaacagt-tggtcctttatcttttattcgtttcaatttgatcctttttgtccattttcata 9877502  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9877503 tgaaattttaagcttaaaattcatgattttattttcttatggtctttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 9877601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 163 - 361
Target Start/End: Original strand, 16515634 - 16515832
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||||||||||||  |||| |||||||||||||| ||| ||||||||||||||| | |||||| ||||||| ||||||||||||||||||||    
T  16515634 ggcaaaattacatttttagtcccttaatttaatttcaggtaatagtttggtcctttatctttttttcatttcaatttggacctttttgtccattttcata 16515733  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||| |||||||| |||||||||||||    
T  16515734 tgaatttttaagcttaaaattcatgattttattttcttatggtctttcagttttcaaatctatgatcctcgtctatatttgcatacgaatattagattt 16515832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 163 - 361
Target Start/End: Original strand, 40934416 - 40934616
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatat--cattttaatttggtcctttttgtccattttca 260  Q
    |||||||||||| ||||||||  ||||||||||||  ||||| ||| ||||||||||||||| | |  ||||| ||||||||||||||||||||||||||    
T  40934416 ggcaaaattacacttttagtccattaacttaattttgggtaacagtttggtcctttatctttttttttcatttcaatttggtcctttttgtccattttca 40934515  T
Q  261 tatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagatt 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  40934516 tatgaatttttaagcttaaaattcatgattttattttcttatggtccttcagtcttcagatctatgatcctcgtctatgtttgcataagaatattagatt 40934615  T
Q  361 t 361  Q
    |    
T  40934616 t 40934616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 163 - 361
Target Start/End: Original strand, 32694309 - 32694506
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||| | ||||||||  ||||||||||| ||||||| | | |||||||| |||||| | |||||||||||||||||||||||||||||||| ||    
T  32694309 ggcaaaattatacttttagtcccttaacttaattacaggtaacaatttggtcctt-atctttttttcattttaatttggtcctttttgtccattttcgta 32694407  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  32694408 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatttatgatcctcgtttatgtttgcataagaatattagattt 32694506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 165 - 361
Target Start/End: Complemental strand, 12650234 - 12650038
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatg 264  Q
    |||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| ||||||||| |||||||||||||| |||||    
T  12650234 caaaattacacttttagtcctttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcatttttgtccatttttatatg 12650135  T
Q  265 aatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||| ||||||||||||||||||||||||||||||| || | |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12650134 aatttttaagtttaaaattcatgattttattttcttatggtctttcaatcttcaaatctatgatcctcgtttatgtttgcataagaatattagattt 12650038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 166 - 361
Target Start/End: Original strand, 40770143 - 40770338
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||||||||||||||| ||||||||||||||||||| |||  |||| ||||||||| | |||||| |||||| ||||||||||||||||||||||||    
T  40770143 aaaattacatttttagtctcttaacttaatttcaggtaacagttgggtcttttatctttttttcatttcaatttgatcctttttgtccattttcatatga 40770242  T
Q  266 atttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||| |||||||||||||||||||||||||||| || || |||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  40770243 atttttaagtttaaaattcatgattttattttcttatgctctttcagtcttcaaatctatgatcctcgtctatgtttgcataagagtataagattt 40770338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 159 - 361
Target Start/End: Complemental strand, 44344342 - 44344140
Alignment:
Q  159 taaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccatttt 258  Q
    |||||||||||||||| |||||||| |||||||||||||||||||| ||| | ||||||||||||| | |||||| ||||||||||||||| || |||||    
T  44344342 taaaggcaaaattacacttttagtccgttaacttaatttcaggtaacagtttagtcctttatctttttttcatttcaatttggtcctttttatctatttt 44344243  T
Q  259 catatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattaga 358  Q
     |||| |||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||| |||||||||||||||||||||||| |||    
T  44344242 tatattaatttttaagcttaaaattcatgattttattttcttatggtatttcagtcttcaaatctatgatcttcgtctatgtttgcataagaatataaga 44344143  T
Q  359 ttt 361  Q
    |||    
T  44344142 ttt 44344140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 166 - 361
Target Start/End: Complemental strand, 3459947 - 3459751
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatat-cattttaatttggtcctttttgtccattttcatatg 264  Q
    ||||||| ||||||||||  ||||||||||||||||||| ||  ||||||||||||||| | | ||||| ||||||||| ||||||||||||||||||||    
T  3459947 aaaattatatttttagtcccttaacttaatttcaggtaacaggttggtcctttatcttttttttcatttcaatttggtcatttttgtccattttcatatg 3459848  T
Q  265 aatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    || ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  3459847 aaattttaagcttaaaattcatgattttattttcttatggtctttcagtcttcaaatctatgatcctcgtttatgtttgtataagaatattagattt 3459751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 162 - 361
Target Start/End: Original strand, 26095487 - 26095687
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||| | ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | || ||| |||||||||||||||||||||||||||    
T  26095487 aggcaaaattatacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcctttcaatttggtcctttttgtccattttcat 26095586  T
Q  262 atgaatttttaagcttaaaa-ttcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagatt 360  Q
    ||||| ||||||||  |||| ||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  26095587 atgaaattttaagcgaaaaaattcatgattttattttcttatggtctttcagtcttcaaatctatgattctcgtctatgtttgcataagaatattagatt 26095686  T
Q  361 t 361  Q
    |    
T  26095687 t 26095687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 166 - 361
Target Start/End: Complemental strand, 1501830 - 1501635
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||| | ||||||||  |||| |||||||||||||| ||| ||||||||||||||| | | ||||||||||| ||||||||||||||||||||||||    
T  1501830 aaaattatacttttagtcccttaatttaatttcaggtaacagtttggtcctttatcttttttttattttaatttgatcctttttgtccattttcatatga 1501731  T
Q  266 atttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||| ||||||||||||||||||||||||||||||| || | ||||||||||||||||  |||||||||||||||||||||||||||||||    
T  1501730 atttttaagtttaaaattcatgattttattttcttatggtctttcaatcttcaaatctatgattttcgtctatgtttgcataagaatattagattt 1501635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 166 - 361
Target Start/End: Original strand, 4694939 - 4695134
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||||| ||||||||| |||| |||||||||| ||| ||| | ||| ||||||||  | |||||| ||||||||| |||||||||||||||||||||    
T  4694939 aaaattacacttttagtctcttaatttaatttcagataacagtttagtcttttatcttattttcatttcaatttggtcttttttgtccattttcatatga 4695038  T
Q  266 atttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||| |||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  4695039 atttttaaacttaaaattcatgattttattttcttatggtctttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 4695134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 160 - 361
Target Start/End: Complemental strand, 39673153 - 39672952
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttc 259  Q
    |||| |||||||||| ||||||||  |||||||||||| || ||| ||| ||||||||||||||| | |||||| |||||||||||||||||| ||||||    
T  39673153 aaagacaaaattacacttttagtcccttaacttaattttagataacagtttggtcctttatctttttttcatttcaatttggtcctttttgtctattttc 39673054  T
Q  260 atatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagat 359  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| || | |||||||||  ||||||||||||||||||||||||| ||||||||||    
T  39673053 atatgaatttttaagtttaaaattcatgattttattttcttatggtctttcaatcttcaaattcatgatcctcgtctatgtttgcataaaaatattagat 39672954  T
Q  360 tt 361  Q
    ||    
T  39672953 tt 39672952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 165 - 361
Target Start/End: Complemental strand, 43726517 - 43726321
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatg 264  Q
    |||||||||||||||||||  ||||||||||||||||||| ||| ||||| ||||| | | | ||||||||||||||| |||||||||||||||||||||    
T  43726517 caaaattacatttttagtcatttaacttaatttcaggtaatagtttggtcatttatttatttttcattttaatttggttctttttgtccattttcatatg 43726418  T
Q  265 aatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    || ||||||||||||||||||| ||||||||||||||| ||| || | ||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  43726417 aacttttaagcttaaaattcataattttattttcttatagtctttcaatcttcaaatctatgatcatcgtctatgtttgcataaaaatattagattt 43726321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 162 - 361
Target Start/End: Complemental strand, 8828895 - 8828695
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtccttt-atctttatatcattttaatttggtcctttttgtccattttca 260  Q
    ||||||||||||| ||| ||||| ||||||||||||||||||| ||| | ||| ||| |||||| | |||||| |||||||||| ||||||||||||| |    
T  8828895 aggcaaaattacactttcagtctcttaacttaatttcaggtaacagtttagtcattttatctttttttcatttcaatttggtcccttttgtccattttta 8828796  T
Q  261 tatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagatt 360  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||| | | ||||||||||||||||||||||||||    
T  8828795 tatgaatttttaagcttaaaattcatgattttattttcttatggtctttcaatcttcaaatctatgatcattgactatgtttgcataagaatattagatt 8828696  T
Q  361 t 361  Q
    |    
T  8828695 t 8828695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 166 - 354
Target Start/End: Original strand, 27546945 - 27547133
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    |||||||||| |||||||  |||| |||||||||||||| ||| ||||||||||||||| | |||||  ||||| |||||||||||||| ||||||||||    
T  27546945 aaaattacatatttagtcccttaatttaatttcaggtaatagtttggtcctttatctttttttcattacaatttagtcctttttgtccactttcatatga 27547044  T
Q  266 atttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatat 354  Q
    ||||||||| ||||||||||||||||||||||||||||  | || ||||||||||||||||||||||||||||||||||||||||||||    
T  27547045 atttttaagattaaaattcatgattttattttcttatgccctttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatat 27547133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 162 - 361
Target Start/End: Original strand, 46283400 - 46283600
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatc-attttaatttggtcctttttgtccattttca 260  Q
    ||||||||||||| ||||| ||| ||||||||||||||| ||| ||| |||| |||||||||| | |  ||||||||||| |||||||||| ||||||||    
T  46283400 aggcaaaattacacttttaatctcttaacttaatttcagataacagtttggtgctttatctttttttttattttaatttgctcctttttgttcattttca 46283499  T
Q  261 tatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagatt 360  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||| || | | ||||||||||||||||||||||||||||||||||||||||||||||    
T  46283500 tatgaatttttaagtttaaaattcatgattttattttcttattgtctttcaattttcaaatctatgatcctcgtctatgtttgcataagaatattagatt 46283599  T
Q  361 t 361  Q
    |    
T  46283600 t 46283600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 166 - 361
Target Start/End: Complemental strand, 731110 - 730915
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||||| ||||||||  ||||||||||||||||||| | | | |||||||||| || | |||||| |||||||||||||||||||||||||||||||    
T  731110 aaaattacacttttagtcccttaacttaatttcaggtaataatttagtcctttatcattttttcatttcaatttggtcctttttgtccattttcatatga 731011  T
Q  266 atttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    | ||||||| |||||||||||||||||||||||||||| || || ||||||||||| ||||||||||||||||||||| |||||||||| ||||||    
T  731010 aattttaagtttaaaattcatgattttattttcttatgctctttcagtcttcaaatttatgatcctcgtctatgtttgtataagaatataagattt 730915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 163 - 361
Target Start/End: Complemental strand, 48524804 - 48524607
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||| |   ||||||||||||||| ||| ||| ||||  ||||||||| | |||||| ||||||||| ||||||||||||||||||    
T  48524804 ggcaaaattacacttttaattccttaacttaatttcagataacagtttggta-tttatctttttttcatttcaatttggtcttttttgtccattttcata 48524706  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  48524705 tgaatttttaagcttaaaattcatgattttattttcttatggtctttcaatcttcaaatctatgatcctcatctatgtttgcataaaaatattagattt 48524607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 162 - 355
Target Start/End: Complemental strand, 6489187 - 6488994
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| ||||||||  ||||||| |||| |||||| ||| | ||| ||||||||| | |||||| ||||| ||||||||  ||||||| |||    
T  6489187 aggcaaaattacaattttagtcccttaactttattttaggtaacagtttagtcatttatctttttttcatttcaattttgtccttttgatccatttacat 6489088  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatatt 355  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||    
T  6489087 atgaatttttaagcttaaaattcatgattttattttcttatggtctttcagtcttcaaatctatgatccttgtctatgtttgcataagaatatt 6488994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 157 - 361
Target Start/End: Original strand, 5586481 - 5586685
Alignment:
Q  157 attaaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccatt 256  Q
    |||||||||||||||||| |||| |||  ||||||| |||| |||||| | | | ||||||||||||| | |||||| ||||| ||||||||  ||||||    
T  5586481 attaaaggcaaaattacacttttggtcccttaactttattttaggtaacaatttagtcctttatctttttttcatttcaattttgtccttttgatccatt 5586580  T
Q  257 ttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatatta 356  Q
    | |||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||    
T  5586581 tacatatgaattattaagcttaaaattcatgattttattttcttatggtctttcagtcttcaaatctatgatccttgtctatgtttgcataagaatatta 5586680  T
Q  357 gattt 361  Q
     ||||    
T  5586681 aattt 5586685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 186 - 361
Target Start/End: Complemental strand, 10296881 - 10296708
Alignment:
Q  186 ttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaattca 285  Q
    |||||||||||| |||||| ||| ||||||||||||||| | | |||| ||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  10296881 ttaacttaattttaggtaacagtttggtcctttatcttttttt-atttcaatttggtt-tttttgtccattttcatatgaatttttaagcttaaaattca 10296784  T
Q  286 tgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||| |||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10296783 tgattttattttattatggtcattcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 10296708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 166 - 361
Target Start/End: Complemental strand, 8641258 - 8641061
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgt--ccattttcatat 263  Q
    ||||||||| ||||||||  |||||||||||||| |||| ||| ||||||||||||||| | | |||  ||||||||||||||| |  ||||| | ||||    
T  8641258 aaaattacacttttagtcccttaacttaatttcaagtaacagtttggtcctttatcttttttttattgcaatttggtcctttttttatccattattatat 8641159  T
Q  264 gaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||| ||||||||||||||||||    
T  8641158 gaatttttaagcttaaaattcatgattttattttcttatggtccttcagtcttcaaatctatgatcatcggctatgttttcataagaatattagattt 8641061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 168 - 355
Target Start/End: Complemental strand, 45315565 - 45315378
Alignment:
Q  168 aattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatgaat 267  Q
    ||||||||||||||||  ||||||| |||| |||||| | | | ||||||||||||| | |||||| ||||| ||||||||  ||||||| |||||||||    
T  45315565 aattacatttttagtcccttaactttattttaggtaacaatttagtcctttatctttttttcatttcaattttgtccttttgatccatttacatatgaat 45315466  T
Q  268 ttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatatt 355  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| | |||||||||||||||||||||||    
T  45315465 ttttaagcttaaaattcatgattttattttcttatggtctttcagtcttcaaatctatgatctttgtctatgtttgcataagaatatt 45315378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 186 - 361
Target Start/End: Original strand, 49021690 - 49021864
Alignment:
Q  186 ttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaattca 285  Q
    ||||||||||||||||||| ||| ||||| ||||||||| | |||||| ||||||||| |||||||||||||||||||||||||| | ||||||||||||    
T  49021690 ttaacttaatttcaggtaacagtttggtcatttatctttttttcatttcaatttggtcatttttgtccattttcatatgaatttt-atgcttaaaattca 49021788  T
Q  286 tgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||| |||||||||||| || | |||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  49021789 tgattttaatttcttatggtctttcaatcttcaaatctatgatcctcgtctatatttgcattagaatattagattt 49021864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 166 - 348
Target Start/End: Original strand, 50208361 - 50208544
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatat-cattttaatttggtcctttttgtccattttcatatg 264  Q
    |||| |||| ||||||||| ||||||||||||||| ||| | | || |||||||||||| | | ||||| |||||||||||||||||||||||||||||     
T  50208361 aaaaatacacttttagtctcttaacttaatttcagataacaatttgatcctttatcttttttttcatttcaatttggtcctttttgtccattttcatata 50208460  T
Q  265 aatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataa 348  Q
    || ||| || |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  50208461 aaatttaaaacttaaaattcatgattttattttcttatggtctttcagtcttcaaatctatgatcctcgtctatgtttgcataa 50208544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 156 - 361
Target Start/End: Original strand, 25012640 - 25012846
Alignment:
Q  156 aattaaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccat 255  Q
    ||||| |||||||||||   ||||||||  |||||||||||| |||||| ||| ||||||||||||||| | |||||||||||||||||||||||| |||    
T  25012640 aattagaggcaaaattaatcttttagtcccttaacttaattttaggtaacagtttggtcctttatctttttttcattttaatttggtcctttttgttcat 25012739  T
Q  256 tttc-atatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatat 354  Q
    |||  ||||  |||||||||| |||||||||||||||||||||||||||||| |   |||||||||||||||||||| |||||||||||| ||| |||||    
T  25012740 ttttgatatacatttttaagcataaaattcatgattttattttcttatggtcttccggtcttcaaatctatgatccttgtctatgtttgcgtaaaaatat 25012839  T
Q  355 tagattt 361  Q
    |||||||    
T  25012840 tagattt 25012846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 161 - 355
Target Start/End: Complemental strand, 26874543 - 26874349
Alignment:
Q  161 aaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttca 260  Q
    |||| ||||||||| ||||||||  ||||||| |||| |||||| ||| | ||||||||||||| | |||||| ||||| ||||||||  ||||||| ||    
T  26874543 aaggtaaaattacacttttagtcccttaactttattttaggtaacagtttagtcctttatctttttttcatttcaattttgtccttttgatccatttaca 26874444  T
Q  261 tatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatatt 355  Q
    ||||||| ||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||| || ||||||||||||||||||||    
T  26874443 tatgaatatttaagcttaaaattcatgattttattttcttatgatctttcagtcttcaaatctatgatccttgtttatgtttgcataagaatatt 26874349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 160 - 361
Target Start/End: Original strand, 33471413 - 33471609
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttc 259  Q
    ||||| ||||||||| ||||||||  ||||||||||||||||||| ||| |||||||| |||||| |   |||| ||||||||||||||| |   |||||    
T  33471413 aaaggtaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtccttcatctttttt--atttcaatttggtccttttttt---ttttc 33471507  T
Q  260 atatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagat 359  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||| || | |||| |||| |||||||||||||||||||||||||||||||||||||    
T  33471508 atatgaatttttaagtttaaaattcatgattttattttcttatagtctttcaatctttaaatttatgatcctcgtctatgtttgcataagaatattagat 33471607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 163 - 355
Target Start/End: Complemental strand, 34480498 - 34480306
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  ||||||| |||| | |||| | | | ||||||||||||| | |||||| ||||| ||| ||||  ||||||| ||||    
T  34480498 ggcaaaattacacttttagtcccttaactttattttaagtaacaatttagtcctttatctttttttcatttcaattttgtcattttgatccatttacata 34480399  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatatt 355  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| || ||||||||||||||||||||    
T  34480398 tgaatttttaagcttaaaattcatgattttattttcttatggtctttcagtcttcaaatctatgatccttgtttatgtttgcataagaatatt 34480306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 162 - 361
Target Start/End: Original strand, 45569014 - 45569202
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| ||||||||| ||||||||||||||||||| ||| ||||| ||||||||| | |||||||| |||||||||||||         |||    
T  45569014 aggcaaaattacacttttagtct-ttaacttaatttcaggtaacagtttggtcttttatcttttt-tcattttattttggtccttttt---------cat 45569102  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||| |||||||||||||||||||||||| || ||  ||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  45569103 atgaatttttaagcttataattcatgattttattttcttatgatctttcggtcttcaaatctatgatcctcgtctatatttgcataagaatattatattt 45569202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 161 - 329
Target Start/End: Complemental strand, 30146375 - 30146207
Alignment:
Q  161 aaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttca 260  Q
    |||||||||||||| ||||||||  ||| ||||||||||||||| ||| || |||| ||||||| | ||||||||||||||||||||||||||||||  |    
T  30146375 aaggcaaaattacacttttagtcccttagcttaatttcaggtaacagtttgatcctatatctttttttcattttaatttggtcctttttgtccatttgaa 30146276  T
Q  261 tatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatc 329  Q
    | |||||||||||| ||||||||||||||||||||||||||| ||| || | |||||||||||||||||    
T  30146275 tttgaatttttaagtttaaaattcatgattttattttcttatagtctttcaatcttcaaatctatgatc 30146207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 165 - 361
Target Start/End: Original strand, 48970700 - 48970898
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatat-cattttaatttggtcctttttg-tccattttcata 262  Q
    |||||||||||||||| ||  |||| ||||||| |||||| |||  |||||||||||||| | | ||||| |||||||||||||||  ||||||||||||    
T  48970700 caaaattacatttttaatcccttaatttaattttaggtaatagttgggtcctttatcttttttttcatttcaatttggtccttttttatccattttcata 48970799  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |  ||||||||| ||||||||||||||||||||| ||||||||| ||   |||||||||||| ||||||| | ||||||||||||||||||||||||||    
T  48970800 tacatttttaagtttaaaattcatgattttatttacttatggtctttccatcttcaaatctacgatcctcttttatgtttgcataagaatattagattt 48970898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 161 - 297
Target Start/End: Original strand, 17191196 - 17191333
Alignment:
Q  161 aaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatat-cattttaatttggtcctttttgtccattttc 259  Q
    |||||||||||||| ||||||||  ||||||||||||||||||| | | ||||| ||||||||||| | ||||| ||||||||||||||||||||||||     
T  17191196 aaggcaaaattacacttttagtcccttaacttaatttcaggtaacaatttggtcatttatctttattttcatttcaatttggtcctttttgtccattttt 17191295  T
Q  260 atatgaatttttaagcttaaaattcatgattttatttt 297  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17191296 atatgaatttttaagcttaaaattcatgattttatttt 17191333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 163 - 361
Target Start/End: Complemental strand, 24234850 - 24234653
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  |||||||||||| |||||| ||| ||||||| ||| ||| | |||||| |||||||||||||||||| |||| ||||    
T  24234850 ggcaaaattacaattttagtcccttaacttaattttaggtaatagtttggtcctatattttttt-tcatttcaatttggtcctttttgtctatttacata 24234752  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||| |||||| ||||||||| ||||||||||| ||||   || | ||||||||| |||| || || ||||||||||||||||||||| ||||||    
T  24234751 tgaattttcaagcttcaaattcatggttttattttctaatggcatttcaatcttcaaatttatggtcttcatctatgtttgcataagaatataagattt 24234653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 162 - 361
Target Start/End: Complemental strand, 35521522 - 35521337
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| ||||||||  |||||||||||| |||||| ||| ||||||||||||||| | |||||| ||||||||| ||||||||||||||||     
T  35521522 aggcaaaattacacttttagtcccttaacttaattttaggtaacagtttggtcctttatcttttt-tcatttcaatttggtcatttttgtccattttca- 35521425  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
               ||||||| |||||||||||||||||||||||||  || |||||||||||||||||| || |||||||||||||||||||||||||||||    
T  35521424 -----------agcttaacattcatgattttattttcttatggtttttcagtcttcaaatctatgat-cttgtctatgtttgcataagaatattagattt 35521337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 215 - 355
Target Start/End: Complemental strand, 28554452 - 28554312
Alignment:
Q  215 ctttatctttatatcattttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtc 314  Q
    |||||||||| | |||||| ||||| ||| ||||  ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| || ||||    
T  28554452 ctttatctttttttcatttcaattttgtcattttgatccatttacatatgaatttttaagattaaaattcatgattttattttcttatggtctttcagtc 28554353  T
Q  315 ttcaaatctatgatcctcgtctatgtttgcataagaatatt 355  Q
    ||||||||||||||||| |||||||||| ||| ||||||||    
T  28554352 ttcaaatctatgatccttgtctatgtttacatgagaatatt 28554312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 160 - 282
Target Start/End: Complemental strand, 32694625 - 32694503
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttc 259  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| | |||||| |||||||||||||||||||||||||    
T  32694625 aaaggcaaatttacatttttagtctcttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttc 32694526  T
Q  260 atatgaatttttaagcttaaaat 282  Q
    ||||  ||||| |||||| ||||    
T  32694525 atatacattttcaagcttcaaat 32694503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 159 - 283
Target Start/End: Complemental strand, 5586805 - 5586681
Alignment:
Q  159 taaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccatttt 258  Q
    |||||||||||||||| ||||||||  ||||||||||||||||||| ||| ||||| ||||||||| | |||||| ||||||||||||||||||||||||    
T  5586805 taaaggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcatttatctttttttcatttcaatttggtcctttttgtccatttt 5586706  T
Q  259 catatgaatttttaagcttaaaatt 283  Q
    |||||  ||||| |||||| |||||    
T  5586705 catatacattttcaagcttcaaatt 5586681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 5618070 - 5618190
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||||||||| |||||||||||||||||||||    
T  5618070 aggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcattttaatttagtcctttttgtccattttcat 5618169  T
Q  262 atgaatttttaagcttaaaat 282  Q
    ||  ||||| |||||| ||||    
T  5618170 atacattttcaagcttcaaat 5618190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 163 - 283
Target Start/End: Original strand, 28554190 - 28554310
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  28554190 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcata 28554289  T
Q  263 tgaatttttaagcttaaaatt 283  Q
    |  ||||| |||||| |||||    
T  28554290 tacattttcaagcttcaaatt 28554310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 214 - 361
Target Start/End: Complemental strand, 27065407 - 27065261
Alignment:
Q  214 cctttatctttatatcattttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagt 313  Q
    ||||||| ||| | |||||| ||||||||| ||||||| |||||||||||  ||||||||||||||| ||||||||||||||||||||||||| |  |||    
T  27065407 cctttatatttttttcatttcaatttggtcatttttgttcattttcatatacatttttaagcttaaa-ttcatgattttattttcttatggtcttccagt 27065309  T
Q  314 cttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||| ||  |  ||| ||||||||||||||||||||||||    
T  27065308 cttcaaatctataataattttctctgtttgcataagaatattagattt 27065261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 162 - 263
Target Start/End: Original strand, 34480183 - 34480284
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| |||||||||||||||||||||||||||    
T  34480183 aggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcat 34480282  T
Q  262 at 263  Q
    ||    
T  34480283 at 34480284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 163 - 282
Target Start/End: Complemental strand, 25012961 - 25012843
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  ||||||||||||||||||| ||| ||||| ||||||||| | |||||||||||||||||||||||||||||||||||    
T  25012961 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtc-tttatctttttttcattttaatttggtcctttttgtccattttcata 25012863  T
Q  263 tgaatttttaagcttaaaat 282  Q
    |  ||||| |||||| ||||    
T  25012862 tacattttcaagcttcaaat 25012843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 163 - 265
Target Start/End: Original strand, 31289254 - 31289356
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| ||||||||| ||||||||||||||||||    
T  31289254 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcttttttgtccattttcata 31289353  T
Q  263 tga 265  Q
    |||    
T  31289354 tga 31289356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 165 - 282
Target Start/End: Original strand, 12649924 - 12650041
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatg 264  Q
    |||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| |||||||||||||||||||||||| ||||     
T  12649924 caaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccatttttatata 12650023  T
Q  265 aatttttaagcttaaaat 282  Q
     ||||| |||||| ||||    
T  12650024 cattttcaagcttcaaat 12650041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 27065144 - 27065264
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||||||||||||  |||||||||||||| |||| ||| ||||||||||||||| | |||||| || |||||| |||||||||||||||||    
T  27065144 aggcaaaattacatttttagtcccttaacttaatttcatgtaacagtttggtcctttatctttttttcatttgaacttggtcttttttgtccattttcat 27065243  T
Q  262 atgaatttttaagcttaaaat 282  Q
    ||  ||||| |||||| ||||    
T  27065244 atacattttcaagcttcaaat 27065264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 40934729 - 40934613
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||||| ||||||||  ||||||||||||||||||| | | ||||||||||||||| | |||||| |||||||||||||||||||||||||||||      
T  40934729 aaaattacacttttagtcccttaacttaatttcaggtaacaatttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatac 40934630  T
Q  266 atttttaagcttaaaat 282  Q
    ||||| |||||| ||||    
T  40934629 attttcaagcttcaaat 40934613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 163 - 282
Target Start/End: Complemental strand, 9877717 - 9877598
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||| ||||||||||  ||||||||||||||||||| | | ||||||||||||||| | |||||| ||||||||||||| ||||||||||||||    
T  9877717 ggcaaaattatatttttagtcccttaacttaatttcaggtaacaatttggtcctttatctttttttcatttcaatttggtcctttatgtccattttcata 9877618  T
Q  263 tgaatttttaagcttaaaat 282  Q
    |  ||||| |||||| ||||    
T  9877617 tacattttcaagcttcaaat 9877598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 160 - 263
Target Start/End: Complemental strand, 16515951 - 16515848
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttc 259  Q
    ||||| ||||||||||||||||||  ||||||||||||||||||| ||| |||| |||||||||| | |||||| |||||| ||||||||||||||||||    
T  16515951 aaaggtaaaattacatttttagtcccttaacttaatttcaggtaacagtttggttctttatctttttttcatttcaatttgatcctttttgtccattttc 16515852  T
Q  260 atat 263  Q
    ||||    
T  16515851 atat 16515848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 163 - 282
Target Start/End: Complemental strand, 50208670 - 50208551
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||||||||| ||  ||||||||||||||| ||| ||| ||||||||||||||| | |||||| |||||| |||||||||||||||||||||    
T  50208670 ggcaaaattacatttttaatcccttaacttaatttcagataacagtttggtcctttatctttttttcatttcaatttgttcctttttgtccattttcata 50208571  T
Q  263 tgaatttttaagcttaaaat 282  Q
    |  |||||||| ||| ||||    
T  50208570 tacatttttaaacttcaaat 50208551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 162 - 283
Target Start/End: Original strand, 6488870 - 6488992
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatc-tttatatcattttaatttggtcctttttgtccattttca 260  Q
    ||||||||||||| ||||||||  ||||||||||||||||||| ||| ||||| |||||| ||| | |||||| ||||||||||||||||||||||||||    
T  6488870 aggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcatttatcttttttttcatttcaatttggtcctttttgtccattttca 6488969  T
Q  261 tatgaatttttaagcttaaaatt 283  Q
    |||  ||||| |||||| |||||    
T  6488970 tatacattttcaagcttcaaatt 6488992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 161 - 282
Target Start/End: Complemental strand, 49021982 - 49021861
Alignment:
Q  161 aaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttca 260  Q
    |||||||||||||| |||| |||  ||||||||||||||||||| ||| ||||| ||||||||| | |||||| |||||||||||||||||||||||| |    
T  49021982 aaggcaaaattacactttttgtcccttaacttaatttcaggtaacagtttggtcatttatctttttttcatttcaatttggtcctttttgtccattttta 49021883  T
Q  261 tatgaatttttaagcttaaaat 282  Q
    |||  ||||| |||||| ||||    
T  49021882 tatacattttcaagcttcaaat 49021861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 163 - 263
Target Start/End: Complemental strand, 4695250 - 4695150
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| |||||||||||||||||| ||||| |||    
T  4695250 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtctatttttata 4695151  T
Q  263 t 263  Q
    |    
T  4695150 t 4695150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 164 - 282
Target Start/End: Complemental strand, 26095803 - 26095684
Alignment:
Q  164 gcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtg-gtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    ||||||||||| ||||||||  ||||||||||||||||||| ||| || | ||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  26095803 gcaaaattacacttttagtcccttaacttaatttcaggtaacagtttgaggcctttatctttttttcatttcaatttggtcctttttgtccattttcata 26095704  T
Q  263 tgaatttttaagcttaaaat 282  Q
    |  ||||| |||||| ||||    
T  26095703 tacattttcaagcttcaaat 26095684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 730798 - 730918
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| ||||||||  ||||||||||||||||||| |   | ||||||||||||| | |||||| ||||||||||||||||||||||||||     
T  730798 aggcaaaattacacttttagtcccttaacttaatttcaggtaacaacttagtcctttatctttttttcatttcaatttggtcctttttgtccattttcaa 730897  T
Q  262 atgaatttttaagcttaaaat 282  Q
    ||  ||||| |||||| ||||    
T  730898 atacattttcaagcttcaaat 730918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 1501522 - 1501638
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||||| ||||||||  |||||||||||||| |||| ||| ||||||||||||||| | |||||| ||||||||  |||||||||||||| |||||     
T  1501522 aaaattacacttttagtcccttaacttaatttcaagtaacagtttggtcctttatctttttttcatttcaatttggttttttttgtccatttttatatgc 1501621  T
Q  266 atttttaagcttaaaat 282  Q
    ||||| |||||| ||||    
T  1501622 attttcaagcttcaaat 1501638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 10296595 - 10296711
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||| ||| ||||||||  ||||||||||||||||||| ||| ||||| ||||||||| | |||||| |||||| || ||||||||||||||||||||     
T  10296595 aaaataacacttttagtcccttaacttaatttcaggtaacagtttggtcttttatctttttttcatttcaatttgatcatttttgtccattttcatatgc 10296694  T
Q  266 atttttaagcttaaaat 282  Q
    ||||| |||||| ||||    
T  10296695 attttcaagcttcaaat 10296711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 163 - 263
Target Start/End: Original strand, 39672836 - 39672936
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  ||||||||||||||||||| ||| | ||||||||||||| | |||||| ||||||||||||||| |||||||| |||    
T  39672836 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttagtcctttatctttttttcatttcaatttggtcctttttatccatttttata 39672935  T
Q  263 t 263  Q
    |    
T  39672936 t 39672936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 163 - 282
Target Start/End: Original strand, 8853096 - 8853214
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  ||||||||||||||||||| ||| |||| |||||||||| | |||||| ||||| |||||| |||||||||||||||    
T  8853096 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggt-ctttatctttttttcatttcaatttagtccttcttgtccattttcata 8853194  T
Q  263 tgaatttttaagcttaaaat 282  Q
    |  ||||| |||||| ||||    
T  8853195 tacattttcaagcttcaaat 8853214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 163 - 282
Target Start/End: Complemental strand, 45286546 - 45286427
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||| |||||||||   ||||||||||||||| ||| ||| || |||||||||||| | |||||| ||||||||| |||||||||||||| |||    
T  45286546 ggcaaaattatatttttagttccttaacttaatttcagataacagtttgatcctttatctttttttcatttcaatttggtcttttttgtccatttttata 45286447  T
Q  263 tgaatttttaagcttaaaat 282  Q
    |  |||||||||||| ||||    
T  45286446 tacatttttaagcttcaaat 45286427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 166 - 283
Target Start/End: Original strand, 26874230 - 26874347
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||||| || |||||  |||| |||||||||||| | ||| |  |||||||||||| | ||||||||||||||||||||||||||||||||||||      
T  26874230 aaaattacacttctagtcccttaatttaatttcaggttacagtttaatcctttatctttttttcattttaatttggtcctttttgtccattttcatatac 26874329  T
Q  266 atttttaagcttaaaatt 283  Q
    ||||| |||||| |||||    
T  26874330 attttcaagcttcaaatt 26874347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 282
Target Start/End: Complemental strand, 33471726 - 33471606
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| ||||||||| |||| ||| ||||| |||| ||| | ||||||||||||| | |||||| ||||||||| |||||||||||||| ||    
T  33471726 aggcaaaattacacttttagtctcttaatttattttcaagtaacagttttgtcctttatctttttttcatttcaatttggtcatttttgtccatttttat 33471627  T
Q  262 atgaatttttaagcttaaaat 282  Q
    ||  ||||| |||||| ||||    
T  33471626 atacattttcaagcttcaaat 33471606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 40770451 - 40770335
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||||| ||||||||  ||||||||||||||||||| | | ||||||||||||||| | |||||| ||||||||| ||||||| |||||||| ||      
T  40770451 aaaattacacttttagtcccttaacttaatttcaggtaacaatttggtcctttatctttttttcatttcaatttggtcatttttgttcattttcaaatac 40770352  T
Q  266 atttttaagcttaaaat 282  Q
    ||||| |||||| ||||    
T  40770351 attttcaagcttcaaat 40770335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 163 - 263
Target Start/End: Original strand, 48524491 - 48524591
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    ||||| |||||| ||||||||  ||||||||||||||| ||| ||| ||||||||||||||| | |||||| |||||| ||||||||||||||||| |||    
T  48524491 ggcaagattacacttttagtcccttaacttaatttcagttaacagtttggtcctttatctttttttcatttcaatttgatcctttttgtccatttttata 48524590  T
Q  263 t 263  Q
    |    
T  48524591 t 48524591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 246
Target Start/End: Complemental strand, 29716469 - 29716384
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatc-tttatatcattttaatttggtcctt 246  Q
    ||||||||||||||||||||||  ||||||||||||||||||| ||| |||||||||||| ||| | |||||| ||||||||||||    
T  29716469 aggcaaaattacatttttagtcccttaacttaatttcaggtaacagtttggtcctttatcttttttttcatttcaatttggtcctt 29716384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 163 - 263
Target Start/End: Original strand, 7349770 - 7349870
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  ||||||||||||||| ||| | | ||||||||||||||| | |||||| ||||||||  |||||||||||||| |||    
T  7349770 ggcaaaattacacttttagtcccttaacttaatttcagataacactttggtcctttatctttttttcatttcaatttggttttttttgtccatttttata 7349869  T
Q  263 t 263  Q
    |    
T  7349870 t 7349870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 167 - 283
Target Start/End: Complemental strand, 27547252 - 27547136
Alignment:
Q  167 aaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatgaa 266  Q
    ||||||||  |||||||  |||||| ||||||| |||| ||  |||||| |||||||| | ||||||||||||||||||||||||||||||||| ||  |    
T  27547252 aaattacacatttagtcccttaactaaatttcatgtaacagcttggtcccttatctttttttcattttaatttggtcctttttgtccattttcaaatata 27547153  T
Q  267 tttttaagcttaaaatt 283  Q
    |||| |||||| |||||    
T  27547152 ttttcaagcttcaaatt 27547136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 163 - 263
Target Start/End: Original strand, 43726213 - 43726313
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| |||||||   ||||||||||||||| ||| ||| ||||||||||||||| | |||||| |||||| || |||||||||||||| |||    
T  43726213 ggcaaaattacacttttagttccttaacttaatttcagataacagtttggtcctttatctttttttcatttcaatttgatcttttttgtccatttttata 43726312  T
Q  263 t 263  Q
    |    
T  43726313 t 43726313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 159 - 282
Target Start/End: Original strand, 44344019 - 44344143
Alignment:
Q  159 taaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatc-tttatatcattttaatttggtcctttttgtccattt 257  Q
    |||||||||||||||| ||||||||  ||||||||||||||||||| |   |||||||||||| ||| | |||||| ||||||||| ||||||| |||||    
T  44344019 taaaggcaaaattacacttttagtcccttaacttaatttcaggtaacaaattggtcctttatcttttttttcatttcaatttggtcttttttgttcattt 44344118  T
Q  258 tcatatgaatttttaagcttaaaat 282  Q
    ||| ||  ||||| |||||| ||||    
T  44344119 tcaaatacattttcaagcttcaaat 44344143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 162 - 276
Target Start/End: Original strand, 45315256 - 45315370
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatat-cattttaatttggtcctttttgtccattttca 260  Q
    ||||||||||||| ||||| ||  ||||||||||||||||||| | | ||||||||||||||| | | ||||||||||||||| ||||| ||||||||||    
T  45315256 aggcaaaattacactttta-tcccttaacttaatttcaggtaataatttggtcctttatcttttttttcattttaatttggtcatttttatccattttca 45315354  T
Q  261 tatgaatttttaagct 276  Q
    |||  ||||| |||||    
T  45315355 tatacattttcaagct 45315370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 282
Target Start/End: Complemental strand, 46283716 - 46283597
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  |||| |||||||||| ||| ||| || |||||||| ||| | |||||| ||||| |||||||||||||||||| |||    
T  46283716 ggcaaaattacacttttagtcccttaatttaatttcagataacagtttgatcctttatatttttttcatttcaatttagtcctttttgtccatttttata 46283617  T
Q  263 tgaatttttaagcttaaaat 282  Q
    |  ||||| |||||| ||||    
T  46283616 tacattttcaagcttcaaat 46283597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 263
Target Start/End: Complemental strand, 48971008 - 48970914
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatat 263  Q
    ||||||||||||||||||  ||||||||||||||||||| | | ||||||||||| |||   |||||| ||||||||| ||||| |||||||||||||    
T  48971008 aaaattacatttttagtcccttaacttaatttcaggtaacattttggtcctttattttt---tcatttcaatttggtcatttttatccattttcatat 48970914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 228 - 359
Target Start/End: Original strand, 16087038 - 16087169
Alignment:
Q  228 tcattttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatga 327  Q
    |||||| |||||  || |||| || ||||| |||||||||||| || ||| ||||||||| |||||||||||||||    |  | ||||||||||||||     
T  16087038 tcatttcaattttatcattttggttcatttgcatatgaattttcaaacttcaaattcatggttttattttcttatgacattaaaatcttcaaatctatgg 16087137  T
Q  328 tcctcgtctatgtttgcataagaatattagat 359  Q
    || || ||||||||||||||| ||||||||||    
T  16087138 tcttcatctatgtttgcataataatattagat 16087169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 247 - 353
Target Start/End: Complemental strand, 35214127 - 35214021
Alignment:
Q  247 tttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcat 346  Q
    ||||||||||| |||||||||| | |||||| || |||||| |||||||||| ||||| | || | | ||||||| ||||||| || ||| |||||||||    
T  35214127 tttgtccatttgcatatgaattgtcaagcttcaagttcatggttttattttcgtatggcctttcaatattcaaatttatgatcttcatctttgtttgcat 35214028  T
Q  347 aagaata 353  Q
    |||||||    
T  35214027 aagaata 35214021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 8828579 - 8828698
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatc---tttatatcattttaatttggtcctttttgtccattttcata 262  Q
    ||||||||| ||||||||  ||||||||||||||||||| ||| |  |||||||||   ||| | |||||| ||||||||||||||| |||||||| |||    
T  8828579 aaaattacacttttagtcccttaacttaatttcaggtaacagtttaatcctttatcttttttttttcatttgaatttggtcctttttatccatttttata 8828678  T
Q  263 tgaatttttaagcttaaaat 282  Q
    |  ||||| |||||| ||||    
T  8828679 tacattttcaagcttcaaat 8828698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 282
Target Start/End: Original strand, 8640942 - 8641064
Alignment:
Q  158 ttaaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattt 257  Q
    ||||| ||||||||||| ||||||||  |||| || ||||||| ||| ||| ||||| ||||||||| | |||||| |||||||| |||||||| |||||    
T  8640942 ttaaacgcaaaattacacttttagtcccttaatttgatttcagataacagtttggtc-tttatcttttt-tcatttcaatttggttctttttgttcattt 8641039  T
Q  258 tcatatgaatttttaagcttaaaat 282  Q
    ||||||  ||||| |||||| ||||    
T  8641040 tcatatacattttcaagcttcaaat 8641064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 161 - 282
Target Start/End: Original strand, 35521223 - 35521340
Alignment:
Q  161 aaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttca 260  Q
    |||||||| ||||| ||||||| | ||||||||||||||||||| |     ||||||||||||| | |||||| ||||| | |||||||||||||||| |    
T  35521223 aaggcaaagttacacttttagtttcttaacttaatttcaggtaacat----gtcctttatctttttttcatttcaatttagacctttttgtccattttta 35521318  T
Q  261 tatgaatttttaagcttaaaat 282  Q
    |||  ||||| |||||| ||||    
T  35521319 tatacattttcaagcttcaaat 35521340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 263
Target Start/End: Complemental strand, 45569295 - 45569218
Alignment:
Q  186 ttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatat 263  Q
    ||||||||||||||| ||| ||| ||||||||||||||| | |||||| ||||||||| ||||| | |||| ||||||    
T  45569295 ttaacttaatttcagataacagtttggtcctttatctttttttcatttcaatttggtcatttttcttcattctcatat 45569218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 186 - 282
Target Start/End: Original strand, 3459659 - 3459754
Alignment:
Q  186 ttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaat 282  Q
    ||||||||||||||||||| ||| |||| |||| ||||| | | ||||||||||| |  |||||||||||||||||||  ||||| |||||| ||||    
T  3459659 ttaacttaatttcaggtaacagtttggttctttttcttttttt-attttaatttgattatttttgtccattttcatatacattttcaagcttcaaat 3459754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 297
Target Start/End: Complemental strand, 4151425 - 4151370
Alignment:
Q  242 tcctttttgtccattttcatatgaatttttaagcttaaaattcatgattttatttt 297  Q
    |||||||||||||||| ||||||||||||||| ||| ||||  |||||||||||||    
T  4151425 tcctttttgtccatttgcatatgaatttttaaactttaaatatatgattttatttt 4151370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 282
Target Start/End: Original strand, 17504037 - 17504162
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtccttta--------tctttatatcattttaatttggtcctttttgtccatt 256  Q
    |||||||||| ||||||||  ||||||||||||||||||| ||| || |||||||        | ||| | |||||| |||||| |||||||||||||||    
T  17504037 caaaattacacttttagtcccttaacttaatttcaggtaacagtttgatcctttattttattttatttttttcatttcaatttgatcctttttgtccatt 17504136  T
Q  257 ttcatatgaatttttaagcttaaaat 282  Q
    || ||||  ||||| |||||| ||||    
T  17504137 tttatatacattttcaagcttcaaat 17504162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 228 - 303
Target Start/End: Complemental strand, 48173713 - 48173638
Alignment:
Q  228 tcattttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttatg 303  Q
    |||||| ||||| ||| |||||| ||| ||  ||||||||||| |||||||||||| ||| ||||||||| |||||    
T  48173713 tcatttcaattttgtcttttttgaccaattatatatgaattttcaagcttaaaatttatgcttttatttttttatg 48173638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 282
Target Start/End: Original strand, 24234590 - 24234656
Alignment:
Q  216 tttatctttatatcattttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaat 282  Q
    ||||||||| | |||||| ||||| ||| |||| ||||||||||||||| ||||| |||||| ||||    
T  24234590 tttatctttttttcatttaaattttgtctttttagtccattttcatatggattttcaagcttcaaat 24234656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 218
Target Start/End: Complemental strand, 27067248 - 27067190
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtccttt 218  Q
    ||||||||||||| | ||||||||  |||||||||||| |||||| ||| |||||||||    
T  27067248 aaaggcaaaattatacttttagtcccttaacttaattttaggtaacagtttggtccttt 27067190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 49154151 - 49154097
Alignment:
Q  164 gcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtccttt 218  Q
    |||||||||||||||| |||  |||||||||||||||||||  || |||||||||    
T  49154151 gcaaaattacattttttgtcccttaacttaatttcaggtaatggtttggtccttt 49154097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 297
Target Start/End: Original strand, 14465070 - 14465126
Alignment:
Q  241 gtcctttttgtccattttcatatgaatttttaagcttaaaattcatgattttatttt 297  Q
    ||||||||  || ||||||||||||||||| ||| ||||| || |||||||||||||    
T  14465070 gtccttttgatcaattttcatatgaattttcaagattaaagtttatgattttatttt 14465126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 155; Significance: 3e-82; HSPs: 91)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 163 - 361
Target Start/End: Original strand, 20209150 - 20209348
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  20209150 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcata 20209249  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  20209250 tgaatttttaagcttaaaattcatgattttattttcttatggtctttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 20209348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 165 - 361
Target Start/End: Original strand, 18677915 - 18678111
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatg 264  Q
    |||||||||||||||||||  |||| |||||||||||||| ||| ||||||||||||||| | |||||| ||||||||||||||||||||||||||||||    
T  18677915 caaaattacatttttagtcccttaatttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatg 18678014  T
Q  265 aatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  18678015 aatttttaagcttaaaattcatgattttattttcttatggtctttcagtcttcaaatctatgatcctcgtctatgtttgcataaaaatataagattt 18678111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 160 - 361
Target Start/End: Complemental strand, 14202113 - 14201912
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttc 259  Q
    ||||||||||||||| ||||||||  ||||||||||||||| ||| ||| || |||||||||||| | |||||||||||| |||||||||||||||||||    
T  14202113 aaaggcaaaattacacttttagtcccttaacttaatttcagataacagtttgatcctttatctttttttcattttaatttagtcctttttgtccattttc 14202014  T
Q  260 atatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagat 359  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||| ||||||||||    
T  14202013 atatgaatttttaagcttaaaattcatgattttattttcttatggtccttcagtcttcaaatctatgatcatcgtctatgtttacataaaaatattagat 14201914  T
Q  360 tt 361  Q
    ||    
T  14201913 tt 14201912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 162 - 361
Target Start/End: Complemental strand, 15543314 - 15543115
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||| ||||||| ||||||||  ||||||||||||||||||| ||| || |||||||||||| | ||||||||||||| || |||||||||||||||||    
T  15543314 aggcataattacacttttagtcccttaacttaatttcaggtaacagtttgatcctttatctttttttcattttaatttgatcatttttgtccattttcat 15543215  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  15543214 atgaatttttaagcttaaaattcatgattttattttcttatggtctttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 15543115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 166 - 361
Target Start/End: Complemental strand, 29434612 - 29434417
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| ||||||||| |||||||||||||||||||||    
T  29434612 aaaattacacttttagtcctttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcatttttgtccattttcatatga 29434513  T
Q  266 atttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||||||||||||||||||||||||||||||||  | | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  29434512 atttttaagcttaaaattcatgattttattttcttatggtctatcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 29434417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 161 - 361
Target Start/End: Original strand, 2862699 - 2862899
Alignment:
Q  161 aaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttca 260  Q
    |||||||||||||| ||||||||  |||||||||||| |||||| ||| ||||||||||||||| | |||||| ||||||||||||||||| ||||||||    
T  2862699 aaggcaaaattacacttttagtcccttaacttaattttaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgttcattttca 2862798  T
Q  261 tatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagatt 360  Q
    |||  ||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2862799 tatacatttttaagcttaaaattcatgattttattttcttatggtcttccagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagatt 2862898  T
Q  361 t 361  Q
    |    
T  2862899 t 2862899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 162 - 361
Target Start/End: Original strand, 25061300 - 25061498
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| |||| |||  ||||||||||||||||||| | | ||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  25061300 aggcaaaattacacttttggtcccttaacttaatttcaggtaacaatttggtcctttatctttttttcattttaatttggtcctttttgtccattttcat 25061399  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25061400 atgaatttttaagcttaaaattcataatttt-ttttcttatggttcttcagtcttcaaatctatgatcctcctctatgtttgcataagaatattagattt 25061498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 166 - 361
Target Start/End: Complemental strand, 44920209 - 44920014
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||||||||||||||  |||||||||||||||| || | | ||||||||||||||| | |||||| |||||||||||||||||||||||||||||||    
T  44920209 aaaattacatttttagtcccttaacttaatttcaggcaacaatttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatga 44920110  T
Q  266 atttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  44920109 attttgaagtttaaaattcatgattttattttcttatggtccttcggtcttcaaatctatgatccttgtctatgtttgcataagaatattagattt 44920014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 160 - 361
Target Start/End: Original strand, 27812564 - 27812765
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttc 259  Q
    ||||||||||||||| |||||||   |||||||||||| |||||| ||| ||||||||||||||| | |||||| |||||||||||||||||||||||||    
T  27812564 aaaggcaaaattacacttttagttccttaacttaattttaggtaatagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttc 27812663  T
Q  260 atatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagat 359  Q
    |||||||||||||||||||||||||||||||||||||||||||| || || | ||||||| | |||||||||||||||||||||||||||||||||||||    
T  27812664 atatgaatttttaagcttaaaattcatgattttattttcttatgttctttcattcttcaattttatgatcctcgtctatgtttgcataagaatattagat 27812763  T
Q  360 tt 361  Q
    ||    
T  27812764 tt 27812765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 156 - 361
Target Start/End: Complemental strand, 35748013 - 35747808
Alignment:
Q  156 aattaaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccat 255  Q
    ||||| ||| ||||||||| |||||||   ||||||||||||||||||| ||| ||||||||||||| | | |||||| ||||||||| |||||||||||    
T  35748013 aattataggtaaaattacacttttagttccttaacttaatttcaggtaacagtttggtcctttatctatttttcatttcaatttggtcatttttgtccat 35747914  T
Q  256 tttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatatt 355  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||||     
T  35747913 tttcatatgaatttttaagcttaaaattcatgattttattttcttatgctctttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatata 35747814  T
Q  356 agattt 361  Q
    ||||||    
T  35747813 agattt 35747808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 176 - 361
Target Start/End: Original strand, 45171591 - 45171776
Alignment:
Q  176 ttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatgaatttttaagc 275  Q
    ||||||||  ||||||||||||| ||||| | | ||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  45171591 ttttagtcccttaacttaatttcgggtaacaatttggtcctttatctttttttcattttaatttgttcctttttgtccattttcatatgaatttttaagc 45171690  T
Q  276 ttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  45171691 ttaaaattcatgattttattttcttatggtccttcagtcttcaaatctacgatcctcgtctatttttgcataagaatattagattt 45171776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 156 - 361
Target Start/End: Complemental strand, 46292903 - 46292698
Alignment:
Q  156 aattaaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccat 255  Q
    ||||| ||| ||||||| | ||||||||| |||| |||||||||||||| ||| ||||||||||||||| | |||||| ||||||||| |||||||||||    
T  46292903 aattataggtaaaattatacttttagtctcttaatttaatttcaggtaatagtttggtcctttatctttttttcatttcaatttggtcttttttgtccat 46292804  T
Q  256 tttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatatt 355  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| || | ||||||||| |||||||||||||||||||||||||||||||||    
T  46292803 tttcatatgaatttttaagcttgaaattcatgattttattttcttatggtctttcaatcttcaaatatatgatcctcgtctatgtttgcataagaatatt 46292704  T
Q  356 agattt 361  Q
    ||||||    
T  46292703 agattt 46292698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 161 - 361
Target Start/End: Complemental strand, 28844048 - 28843848
Alignment:
Q  161 aaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttca 260  Q
    |||||||||||||| ||||||||  |||||||||||||||  || | | ||||||||||||||| | |||||| ||||||||| ||||||||||||||||    
T  28844048 aaggcaaaattacacttttagtcccttaacttaatttcagacaacaatttggtcctttatctttttttcatttcaatttggtcatttttgtccattttca 28843949  T
Q  261 tatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagatt 360  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||||    
T  28843948 tatgaatttttaagcttaaaattcatgattttattttcttatggtctttcaatcttcaaatctatgatcctcatctatgtttgcataagaatattagatt 28843849  T
Q  361 t 361  Q
    |    
T  28843848 t 28843848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 161 - 361
Target Start/End: Original strand, 45539830 - 45540030
Alignment:
Q  161 aaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttca 260  Q
    |||||||||||| |  |||||||  |||||||||||||||| || ||| ||||||||||||||| | | |||| ||||||||| |||||||||||||| |    
T  45539830 aaggcaaaattatacctttagtcccttaacttaatttcaggcaacagtttggtcctttatcttttttttatttcaatttggtcatttttgtccattttta 45539929  T
Q  261 tatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagatt 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  45539930 tatgaatttttaagcttaaaattcatgattttattttcttatggtccttcagtcttcaaatctatgatcctcgtctatgtttgcataaaaatattagatt 45540029  T
Q  361 t 361  Q
    |    
T  45540030 t 45540030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 162 - 361
Target Start/End: Complemental strand, 44664936 - 44664737
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| ||||||||  |||| ||||||| |||||| ||  | ||||||||||||| | |||||| |||||||||||||||||||||||||||    
T  44664936 aggcaaaattacacttttagtcccttaatttaattttaggtaacagattagtcctttatctttttttcatttcaatttggtcctttttgtccattttcat 44664837  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  44664836 atgaatttttaagcttaaaattcatgattttattttcttatggtctttcaatcttcaaatcaatgatcctcgtctatgtttgcataagaatattagattt 44664737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 163 - 361
Target Start/End: Original strand, 49002237 - 49002433
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  ||||||||| ||||||||| ||| ||||||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  49002237 ggcaaaattacacttttagtcccttaacttaacttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcata 49002336  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||  ||||||| ||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  49002337 tga--ttttaagtttaaaattcatgattttattttcttatggtctttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 49002433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 160 - 361
Target Start/End: Original strand, 38674978 - 38675179
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttc 259  Q
    ||||||||||||||| ||||| ||  ||||||||||||||||||| ||| ||||||||||||||| | | |||| |||||||||||||||||||||||||    
T  38674978 aaaggcaaaattacacttttaatcccttaacttaatttcaggtaacagtttggtcctttatctttttttaatttcaatttggtcctttttgtccattttc 38675077  T
Q  260 atatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagat 359  Q
    |||| || ||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||| |||||||| |||||||||||||||    
T  38675078 atataaaattttaagcttaaaattcatgattttattttcttatggtctttcagtctttaaatctatgatcctcgtttatgtttgtataagaatattagat 38675177  T
Q  360 tt 361  Q
    ||    
T  38675178 tt 38675179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 165 - 361
Target Start/End: Original strand, 45214378 - 45214575
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatat-cattttaatttggtcctttttgtccattttcatat 263  Q
    |||||||||| ||||||||  ||||||||||||||| ||| ||| ||||||||||||||| | | ||||| |||||||||||||||||||||||||||||    
T  45214378 caaaattacacttttagtcccttaacttaatttcagttaacagtttggtcctttatcttttttttcatttcaatttggtcctttttgtccattttcatat 45214477  T
Q  264 gaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||| ||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  45214478 gaaattttaagcttaaaattcataattttattttcttatggtctttgagtcttcaaatctatgattctcgtctatgtttgcataagaatattagattt 45214575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 163 - 361
Target Start/End: Original strand, 39778280 - 39778477
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||| ||| |||||| || ||||||||||||||||||| ||| | ||| ||||||||| | |||||| ||||||||| ||||||||||||||||||    
T  39778280 ggcaaaataacacttttagcctcttaacttaatttcaggtaacagtttagtcatttatcttttt-tcatttcaatttggtcttttttgtccattttcata 39778378  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  39778379 tgaatttttaagcttaaaattcatgattttattttcttatggtctttcggtcttcaaatctatgatcctcgtctttgtttgcataagaatattagattt 39778477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 156 - 361
Target Start/End: Original strand, 21016914 - 21017119
Alignment:
Q  156 aattaaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccat 255  Q
    ||||||||| ||||||| | ||||| ||  |||| |||||||||||||| ||  ||||| ||||||||| | |||||||||||||||| |||||||||||    
T  21016914 aattaaaggtaaaattatacttttaatcccttaatttaatttcaggtaacagattggtcatttatctttttttcattttaatttggtcttttttgtccat 21017013  T
Q  256 tttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatatt 355  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||| ||||    
T  21017014 tttcatatgaatttttaagtttaaaattcatgattttattttcttatggtctttcaatcttcaaatctatgatcctcgtctatgtttgcataagagtatt 21017113  T
Q  356 agattt 361  Q
    ||||||    
T  21017114 agattt 21017119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 163 - 361
Target Start/End: Original strand, 11220992 - 11221190
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  |||||||||||| |||||| ||| || |||||||||||| | |||||| ||||| ||| ||||||| ||||||||||    
T  11220992 ggcaaaattacacttttagtcccttaacttaattttaggtaacagtttgatcctttatctttttttcatttcaattttgtcatttttgttcattttcata 11221091  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |  ||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11221092 tacatttttaagcttaaaattcatgattttattttcttatggtcttccagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 11221190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 165 - 361
Target Start/End: Original strand, 45567410 - 45567606
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatg 264  Q
    |||||||||| ||||||||  |||||||||||| |||||| ||| | ||| ||||||||| | |||||| |||||||||||||||||||||||||||||     
T  45567410 caaaattacacttttagtcccttaacttaattttaggtaacagtttagtcttttatctttttttcatttcaatttggtcctttttgtccattttcatata 45567509  T
Q  265 aatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||||||||||| |||||||||||||| || | |||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  45567510 aatttttaagcttaaaattcatgatttcattttcttatggtctttcaatcttcaaatctatgattctcgtctatgtttgcataaaaatattagattt 45567606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 186 - 361
Target Start/End: Complemental strand, 11440091 - 11439916
Alignment:
Q  186 ttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaattca 285  Q
    ||||||||||||||| ||| ||| || | |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  11440091 ttaacttaatttcagataacagtttgatactttatctttttttcattttaatttggtcctttttgtccattttcatatgaatttttaagtttaaaattca 11439992  T
Q  286 tgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||||| ||   ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11439991 tgattttattttcttatggtctttccatcttcaaatctatgatcttcgtctatgtttgcataagaatattagattt 11439916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 162 - 361
Target Start/End: Original strand, 44976752 - 44976951
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| ||||||||  |||||||||||| | |||| ||| ||||| ||||||||| | |||||| ||||||||| ||||| |||||||||||    
T  44976752 aggcaaaattacagttttagtcccttaacttaattttatgtaacagtttggtcttttatctttttttcatttcaatttggtcatttttatccattttcat 44976851  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||  |||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  44976852 atacatttttaagcttaaaattcatgattttattttcttatgatcttttagtcttcaaatttatgatcctcgtctatgtttgaataagaatattagattt 44976951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 163 - 361
Target Start/End: Complemental strand, 18169068 - 18168870
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  ||||||||||||||| ||| ||| ||||| ||||||||| | |||||| ||||||||||||||| || ||||| |||    
T  18169068 ggcaaaattacacttttagtcccttaacttaatttcagataacagtttggtcatttatctttttttcatttcaatttggtcctttttatctatttttata 18168969  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||| ||||||| |||||||||||||||||||||||| ||||||    
T  18168968 tgaatttttaagcttaaaattcatgattttattttcttatagtctttcagtcttcaaatatatgatcttcgtctatgtttgcataagaatataagattt 18168870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 164 - 361
Target Start/End: Complemental strand, 11989830 - 11989631
Alignment:
Q  164 gcaaaattacatttttagtctgttaacttaattt--caggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||| ||||| ||| || |||||||||  ||||||| ||| | ||||||||||||| | |||||| ||||||||| |||||||||||||||||    
T  11989830 gcaaaattacacttttaatctcttcacttaatttttcaggtaacagtttcgtcctttatctttttttcatttcaatttggtcatttttgtccattttcat 11989731  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    || |||||||||| ||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11989730 ataaatttttaagtttaaaattcatgattttattttcttatggtctttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattatattt 11989631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 166 - 361
Target Start/End: Complemental strand, 44036996 - 44036802
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||||| ||||||||| |||  |||||||||||||| ||| ||||| ||||||||| | |||||  |||||| ||||||||||||||||||||||||    
T  44036996 aaaattacacttttagtctcttagtttaatttcaggtaacagtttggtcatttatcttttt-tcattgcaatttgatcctttttgtccattttcatatga 44036898  T
Q  266 atttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||| ||||||||||||||||||||||||||||||  || | |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  44036897 atttttaagtttaaaattcatgattttattttcttatggtatttcaatcttcaaatctatgattctcgtctatgtttgcataagaatattagattt 44036802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 165 - 361
Target Start/End: Original strand, 14463124 - 14463321
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatg 264  Q
    |||||||||||||||||||  || ||||||||||| |||| ||| ||||||||||||||| | |||||| ||||||||||||||||||||||||||||||    
T  14463124 caaaattacatttttagtcccttgacttaatttcaagtaatagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatg 14463223  T
Q  265 aatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttc-aaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||| ||||||||||| ||||||||||||||||| | || | ||||| ||||||||||||| | ||||||||||||||||||||||| ||||    
T  14463224 aatttttaagtttaaaattcattattttattttcttatggcctttcaatcttcaaaatctatgatccgcatctatgtttgcataagaatattatattt 14463321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 162 - 361
Target Start/End: Original strand, 31574250 - 31574451
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgt-ccattttca 260  Q
    ||||||||||| ||||||| ||  |||||||||||| |||||| ||| ||||||||||||||| | |||||||||||||||  ||||| | |||||||||    
T  31574250 aggcaaaattatatttttaatcccttaacttaattttaggtaacagtttggtcctttatctttttttcattttaatttggttattttttttccattttca 31574349  T
Q  261 tat-gaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagat 359  Q
    | | ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||  ||||||||||||||||| ||||||||||    
T  31574350 ttttgaatttttaagcttaaaattcatgattttattttcttatggtctttcagtcttcaaatctatgatcagcgtctatgtttgcataaaaatattagat 31574449  T
Q  360 tt 361  Q
    ||    
T  31574450 tt 31574451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 162 - 355
Target Start/End: Complemental strand, 41944191 - 41943998
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| ||||||||  ||||||| |||| |||||| ||| | ||||||||||||||| | |||| ||||| ||||||||  |||||||||||    
T  41944191 aggcaaaattacacttttagtcccttaactttattttaggtaatagtttagtcctttatctttatttaatttcaattttgtccttttgatccattttcat 41944092  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatatt 355  Q
    |||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||| |||| |||| |||||||||||||||||||||||    
T  41944091 atgaatttttaagcttaaaattaatgattttattttcttatggtctttcagtcttcaaatttatgttccttgtctatgtttgcataagaatatt 41943998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 165 - 361
Target Start/End: Complemental strand, 6954309 - 6954113
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatg 264  Q
    |||||||||| ||||||||  |||||||||||| || ||| | | ||||| ||||||||| | |||||| |||||| ||||||||||||||||| ||||     
T  6954309 caaaattacacttttagtcccttaacttaattttagataacaatttggtcatttatctttttttcatttcaatttgatcctttttgtccatttttatata 6954210  T
Q  265 aatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
     ||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  6954209 cattttaaagcttaaaattcatgattttattttcttatggtctttcagtcttcaaatctatgatccttgtctatgtttgtataagaatattagattt 6954113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 186 - 361
Target Start/End: Complemental strand, 15020565 - 15020389
Alignment:
Q  186 ttaacttaatttcaggtaagagtgtggtcctttatctttatat-cattttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaattc 284  Q
    |||||||||||| || ||| ||| ||||||||||||||| | | ||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||    
T  15020565 ttaacttaatttgagataacagtttggtcctttatcttttttttcattttaatttggtcttttttgtccattttcatttcaatttttaagcttaaaattc 15020466  T
Q  285 atgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||| |||||||| || || |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  15020465 atgattttatattcttatgatctttcagtcttcaaatctatgatcctcgtctatgtttgcataataatattagattt 15020389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 166 - 361
Target Start/End: Original strand, 53712254 - 53712449
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||||| ||||||||  |||||||||||| |||||| ||| || |||||||||||| | |||||||||||||||| ||||||||||||| ||| |      
T  53712254 aaaattacagttttagtcccttaacttaattttaggtaacagtttgatcctttatctttttttcattttaatttggtcatttttgtccatttgcatgtac 53712353  T
Q  266 atttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||||| |||||||||||||||| || |||||||||||||| ||||||| ||||||||||||||| || ||||||||||||    
T  53712354 atttttaagcttaaaattcattattttattttcttatgatcttttagtcttcaaatttatgatcttcgtctatgtttgcagaaaaatattagattt 53712449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 162 - 360
Target Start/End: Complemental strand, 26845205 - 26845011
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| ||||||||  | |||||||||| |||||| | | ||||||||||| ||| |  ||||||||||||||| |||||||||||||||||    
T  26845205 aggcaaaattacaattttagtccctcaacttaattttaggtaacaatttggtcctttatattttttccattttaatttggtcttttttgtccattttcat 26845106  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagatt 360  Q
    ||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||    | | |||||||||||||||||||||    
T  26845105 atacatttttaagcttaaaattcatgattttattttcttatggtcttttagtcttcaaatctatgattct----tgtatttgcataagaatattagatt 26845011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 158 - 361
Target Start/End: Original strand, 13996917 - 13997115
Alignment:
Q  158 ttaaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattt 257  Q
    |||||| |||||||||||||||||||  |||| |||||||||||||| ||| |  |  ||||||||| | |||||||||||||||| |||| ||| ||||    
T  13996917 ttaaagacaaaattacatttttagtcccttaatttaatttcaggtaacagtttaattttttatctttttttcattttaatttggtctttttagtctattt 13997016  T
Q  258 tcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattag 357  Q
    ||||| ||| |||||||     ||||||||||||||||||||||| || ||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  13997017 tcatacgaaattttaag-----aattcatgattttattttcttattgtgcttcagtcttcaaatctataatcctcgtctatgtttgcataagaatattag 13997111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 164 - 305
Target Start/End: Original strand, 32809155 - 32809296
Alignment:
Q  164 gcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatat 263  Q
    ||||||||||| |||| |||  |||| |||||||||||||| | | ||||||||||||||| | |||||| |||||||||||||||||||||||||||||    
T  32809155 gcaaaattacacttttggtcccttaatttaatttcaggtaacaatttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatat 32809254  T
Q  264 gaatttttaagcttaaaattcatgattttattttcttatggt 305  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  32809255 gaatttttaagcttaaaattcatgatttgattttcttatggt 32809296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 162 - 297
Target Start/End: Complemental strand, 50711310 - 50711171
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| |||||||||||||||||||||||||||    
T  50711310 aggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcat 50711211  T
Q  262 atgaat----ttttaagcttaaaattcatgattttatttt 297  Q
    ||||||    ||||||||||||||||||||||||||||||    
T  50711210 atgaatttttttttaagcttaaaattcatgattttatttt 50711171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 163 - 355
Target Start/End: Complemental strand, 14626450 - 14626258
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||| |||| || |||| |||||| |   | ||||||||||||| | |||||| ||||| ||||||||  ||||||| ||||    
T  14626450 ggcaaaattacacttttagtctcttaattttattttaggtaacaacttagtcctttatctttttttcatttcaattttgtccttttgatccatttacata 14626351  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatatt 355  Q
    |||||||||||| | ||||||||||||||||||||||||||||| || ||||||||||||||||||| |  |||||  |||||||||||||||    
T  14626350 tgaatttttaagttcaaaattcatgattttattttcttatggtctttcagtcttcaaatctatgatctttatctatacttgcataagaatatt 14626258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 186 - 361
Target Start/End: Original strand, 43378162 - 43378328
Alignment:
Q  186 ttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaattca 285  Q
    |||||||||||| |||||| ||| ||||||||||||||| | |||||| ||||||||||         ||||||||||||||||||||| ||||||||||    
T  43378162 ttaacttaattttaggtaacagtttggtcctttatctttttttcatttcaatttggtcc---------attttcatatgaatttttaagtttaaaattca 43378252  T
Q  286 tgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||| |||||||| || | ||||||||| |||||||||||||||||||||||||| ||||||| ||||    
T  43378253 tgattttatttttttatggtctttcaatcttcaaatatatgatcctcgtctatgtttgcataacaatattatattt 43378328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 163 - 288
Target Start/End: Complemental strand, 35415556 - 35415431
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||||||||||||  ||||||||||||||||||| ||| ||||| ||||||||| | |||||| ||||||||||||| ||||||||||||||    
T  35415556 ggcaaaattacatttttagtcccttaacttaatttcaggtaacagtttggtcttttatctttttttcatttcaatttggtcctttctgtccattttcata 35415457  T
Q  263 tgaatttttaagcttaaaattcatga 288  Q
    |  ||||| |||||||||||||||||    
T  35415456 tacattttcaagcttaaaattcatga 35415431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 266 - 361
Target Start/End: Complemental strand, 18461831 - 18461736
Alignment:
Q  266 atttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||| || |||||||| ||||||||||||||||||||||    
T  18461831 atttttaagcttaaaattcatgattttattttcttatggtctttcagtctttaaatctatggtcgtcgtctatatttgcataagaatattagattt 18461736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 165 - 300
Target Start/End: Complemental strand, 36546391 - 36546257
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatg 264  Q
    |||||||  ||||||||||| ||||||||||||||||||| ||| || |||||||| ||| | |||||| ||||| ||  ||||||||||||||||||||    
T  36546391 caaaatttaatttttagtcttttaacttaatttcaggtaacagtttgatcctttattttttt-tcatttcaattttgtattttttgtccattttcatatg 36546293  T
Q  265 aatttttaagcttaaaattcatgattttattttctt 300  Q
    ||| ||||||||||||||| ||||||||||||||||    
T  36546292 aatctttaagcttaaaatttatgattttattttctt 36546257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 165 - 300
Target Start/End: Original strand, 36561923 - 36562057
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatg 264  Q
    |||||||  ||||||||||| ||||||||||||||||||| ||| || |||||||| ||| | |||||| ||||| ||  ||||||||||||||||||||    
T  36561923 caaaatttaatttttagtcttttaacttaatttcaggtaacagtttgatcctttatttttct-tcatttcaattttgtattttttgtccattttcatatg 36562021  T
Q  265 aatttttaagcttaaaattcatgattttattttctt 300  Q
    ||| ||||||||||||||| ||||||||||||||||    
T  36562022 aatctttaagcttaaaatttatgattttattttctt 36562057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 162 - 282
Target Start/End: Complemental strand, 13997232 - 13997112
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||||||||||||  || |||||||||||||||| | | ||||||||||||||| | ||||||||||||||||||||||||| ||||||||    
T  13997232 aggcaaaattacatttttagtcccttgacttaatttcaggtaacaatttggtcctttatctttttttcattttaatttggtcctttttgtcaattttcat 13997133  T
Q  262 atgaatttttaagcttaaaat 282  Q
    ||  ||||| |||||| ||||    
T  13997132 atacattttcaagcttcaaat 13997112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 160 - 282
Target Start/End: Original strand, 36546099 - 36546222
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctt-tatatcattttaatttggtcctttttgtccatttt 258  Q
    ||||||||||||||||||||||||  ||||||||||||||||||| | | |||||||||||||| | | |||||| ||||||||||||||||||||||||    
T  36546099 aaaggcaaaattacatttttagtcctttaacttaatttcaggtaacaatttggtcctttatcttctttttcatttcaatttggtcctttttgtccatttt 36546198  T
Q  259 catatgaatttttaagcttaaaat 282  Q
    |||||  ||||| |||||| ||||    
T  36546199 catatacattttcaagcttcaaat 36546222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 160 - 282
Target Start/End: Complemental strand, 36562215 - 36562092
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctt-tatatcattttaatttggtcctttttgtccatttt 258  Q
    ||||||||||||||||||||||||  ||||||||||||||||||| | | |||||||||||||| | | |||||| ||||||||||||||||||||||||    
T  36562215 aaaggcaaaattacatttttagtcctttaacttaatttcaggtaacaatttggtcctttatcttctttttcatttcaatttggtcctttttgtccatttt 36562116  T
Q  259 catatgaatttttaagcttaaaat 282  Q
    |||||  ||||| |||||| ||||    
T  36562115 catatacattttcaagcttcaaat 36562092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 163 - 282
Target Start/End: Complemental strand, 38675295 - 38675176
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  ||||| ||||||||||||| ||| ||||||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  38675295 ggcaaaattacacttttagtcccttaacataatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcata 38675196  T
Q  263 tgaatttttaagcttaaaat 282  Q
    |  ||||| |||||| ||||    
T  38675195 tacattttcaagcttcaaat 38675176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 164 - 282
Target Start/End: Original strand, 44919898 - 44920017
Alignment:
Q  164 gcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatc-tttatatcattttaatttggtcctttttgtccattttcata 262  Q
    ||||||||||||||||||||  ||||||||||||||||||| ||| ||||| |||||| ||| | |||||| ||||||||||||||||||||||||||||    
T  44919898 gcaaaattacatttttagtcccttaacttaatttcaggtaatagtttggtcatttatcttttttttcatttcaatttggtcctttttgtccattttcata 44919997  T
Q  263 tgaatttttaagcttaaaat 282  Q
    |  ||||| |||||| ||||    
T  44919998 tacattttcaagcttcaaat 44920017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 275 - 361
Target Start/End: Complemental strand, 40612469 - 40612383
Alignment:
Q  275 cttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||||||||||||||||||||||| || | ||||||||||||||||| |||||||||||||||||| ||| ||||||||    
T  40612469 cttaaaattcatgattttattttcttatggtctttaaatcttcaaatctatgatcatcgtctatgtttgcataataattttagattt 40612383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 50710696 - 50710822
Alignment:
Q  156 aattaaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccat 255  Q
    ||||||||||| ||||||| ||||||||  ||||||||||||||||||| ||| ||||| ||||||||| | |||||| ||||||||| |||||||||||    
T  50710696 aattaaaggcagaattacacttttagtcccttaacttaatttcaggtaacagtttggtcttttatctttttttcatttcaatttggtcttttttgtccat 50710795  T
Q  256 tttcatatgaatttttaagcttaaaat 282  Q
    ||||| ||  ||||| |||||| ||||    
T  50710796 tttcaaatacattttcaagcttcaaat 50710822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 165 - 282
Target Start/End: Complemental strand, 20209462 - 20209345
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatg 264  Q
    |||||||||| ||||||||  |||||||||||||| |||| ||| ||||||||||||||| | |||||| |||||||||||||||||| ||||| ||||     
T  20209462 caaaattacacttttagtcccttaacttaatttcaagtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtctatttttatata 20209363  T
Q  265 aatttttaagcttaaaat 282  Q
     ||||| |||||||||||    
T  20209362 cattttcaagcttaaaat 20209345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 163 - 263
Target Start/End: Complemental strand, 14463437 - 14463337
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| |||||||||||||||||| ||||| |||    
T  14463437 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtcaatttttata 14463338  T
Q  263 t 263  Q
    |    
T  14463337 t 14463337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 46292581 - 46292701
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| |||||||   ||||||||||||||||||| ||| ||||||||||||||| | |||||| |||||| ||||||||||||||||| ||    
T  46292581 aggcaaaattacacttttagttccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttgatcctttttgtccatttttat 46292680  T
Q  262 atgaatttttaagcttaaaat 282  Q
    ||  ||||| |||||| ||||    
T  46292681 atacattttcaagcttcaaat 46292701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 163 - 282
Target Start/End: Original strand, 44664621 - 44664740
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  ||||||||||||||||||| | | | ||||||||||||| | |||||| |||||||||||||||||||||||| |||    
T  44664621 ggcaaaattacacttttagtcccttaacttaatttcaggtaacaatttagtcctttatctttttttcatttcaatttggtcctttttgtccatttttata 44664720  T
Q  263 tgaatttttaagcttaaaat 282  Q
    |  ||||| |||||| ||||    
T  44664721 tacattttcaagcttcaaat 44664740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 160 - 282
Target Start/End: Original strand, 11989512 - 11989634
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttc 259  Q
    |||| |||||||||| ||||||||  |||||||||||| |||||| | | ||||||||||||||| | |||||| ||||||||||||||||||||||||     
T  11989512 aaagacaaaattacacttttagtcccttaacttaattttaggtaataatttggtcctttatctttttttcatttcaatttggtcctttttgtccattttt 11989611  T
Q  260 atatgaatttttaagcttaaaat 282  Q
    ||||  ||||| |||||| ||||    
T  11989612 atatacattttcaagcttcaaat 11989634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 161 - 282
Target Start/End: Complemental strand, 11221308 - 11221187
Alignment:
Q  161 aaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttca 260  Q
    |||| ||||||||| ||||| ||  ||||||||||||||||||| | | ||||||||||||||| | |||||| |||||||||||||||||||||||||     
T  11221308 aaggtaaaattacacttttaatcccttaacttaatttcaggtaacaatttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcg 11221209  T
Q  261 tatgaatttttaagcttaaaat 282  Q
    |||  ||||| |||||| ||||    
T  11221208 tatacattttcaagcttcaaat 11221187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 162 - 263
Target Start/End: Complemental strand, 31574568 - 31574467
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| ||||||||  ||||||||||||||||||| | | ||||||||||||||| | |||||| ||||||| | |||||||||||||||||    
T  31574568 aggcaaaattacacttttagtcccttaacttaatttcaggtaacaatttggtcctttatctttttttcatttcaatttggccatttttgtccattttcat 31574469  T
Q  262 at 263  Q
    ||    
T  31574468 at 31574467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 285 - 361
Target Start/End: Original strand, 2773278 - 2773354
Alignment:
Q  285 atgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||||||||||||| || ||||||||||| |||||| ||||||||||||||||||||||||| ||||||    
T  2773278 atgattttattttcttatggtctttcagtcttcaaatttatgattctcgtctatgtttgcataagaatataagattt 2773354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 285 - 361
Target Start/End: Original strand, 50710990 - 50711066
Alignment:
Q  285 atgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||| || || ||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  50710990 atgattttattttcttatgctctttcagtcttcaaatctatgatcatcgtctatgtttgcataagaatataagattt 50711066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 163 - 282
Target Start/End: Complemental strand, 39778593 - 39778474
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  |||||||||||| |||||| |||  |||| ||||||||| | | |||| ||||||||||||||||||||||||||||    
T  39778593 ggcaaaattacacttttagtcccttaacttaattttaggtaacagttcggtcatttatctttttttaatttcaatttggtcctttttgtccattttcata 39778494  T
Q  263 tgaatttttaagcttaaaat 282  Q
    |  ||||| |||||| ||||    
T  39778493 tacattttcaagcttcaaat 39778474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 188 - 282
Target Start/End: Original strand, 14201821 - 14201915
Alignment:
Q  188 aacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaat 282  Q
    ||||||||||||||||| ||| | ||||||||||||| | |||||| |||||||||||||||||||||||||||||  ||||| |||||| ||||    
T  14201821 aacttaatttcaggtaacagtttcgtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatacattttcaagcttcaaat 14201915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 165 - 282
Target Start/End: Complemental strand, 45171893 - 45171773
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatc---attttaatttggtcctttttgtccattttcat 261  Q
    |||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |    |||| |||||||||||||||||||||||||||    
T  45171893 caaaattacacttttagtcatttaacttaatttcaggtaacagtttggtcctttatcttttttttttaatttcaatttggtcctttttgtccattttcat 45171794  T
Q  262 atgaatttttaagcttaaaat 282  Q
    ||  ||||| |||||| ||||    
T  45171793 atacattttcaagcttcaaat 45171773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 161 - 282
Target Start/End: Original strand, 29434299 - 29434420
Alignment:
Q  161 aaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttca 260  Q
    |||| ||||||| | ||||||||  ||||||||||||||||||| | | || |||||||||||| | |||||| |||||||||||||||||||||||| |    
T  29434299 aaggtaaaattatacttttagtcccttaacttaatttcaggtaacaatttgatcctttatctttttttcatttcaatttggtcctttttgtccattttta 29434398  T
Q  261 tatgaatttttaagcttaaaat 282  Q
    |||  ||||| |||||| ||||    
T  29434399 tatacattttcaagcttcaaat 29434420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 162 - 263
Target Start/End: Complemental strand, 32809434 - 32809334
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| |||| |||  ||||||||||||||||||| ||| ||||| ||||||||| | |||||| |||||||| ||||||||||||||||||    
T  32809434 aggcaaaattacacttttggtccattaacttaatttcaggtaacagtttggtc-tttatctttttttcatttcaatttggttctttttgtccattttcat 32809336  T
Q  262 at 263  Q
    ||    
T  32809335 at 32809334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 163 - 260
Target Start/End: Complemental strand, 50711170 - 50711073
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttca 260  Q
    |||||||||||| ||||||||  ||||||||||||||||||| ||| ||| ||||||||||| | |||||| ||||||||||||||  ||||||||||    
T  50711170 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggacctttatctttttttcatttcaatttggtccttttaatccattttca 50711073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 186 - 282
Target Start/End: Original strand, 15543022 - 15543118
Alignment:
Q  186 ttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaat 282  Q
    |||||||||||||| |||| ||| ||||||||||||||| | |||||| |||||||||||||||||||||||| ||||  ||||| |||||| ||||    
T  15543022 ttaacttaatttcatgtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccatttttatatacattttcaagcttcaaat 15543118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 45540143 - 45540027
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||||||||||||||  |||||||| || ||||||| | | ||||||||||||||| |  ||||| |||||||||||||||||||| ||||||||      
T  45540143 aaaattacatttttagtcccttaacttacttacaggtaataatttggtcctttatcttttttccatttcaatttggtcctttttgtccaatttcatatac 45540044  T
Q  266 atttttaagcttaaaat 282  Q
    ||||| |||||| ||||    
T  45540043 attttcaagcttcaaat 45540027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 289 - 361
Target Start/End: Complemental strand, 50710891 - 50710819
Alignment:
Q  289 ttttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||| || || ||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  50710891 ttttattttcttatgctctttcagtcttcaaatctatgatccttgtctatgtttgcataagaatataagattt 50710819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 162 - 283
Target Start/End: Original strand, 41943874 - 41943996
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatat-cattttaatttggtcctttttgtccattttca 260  Q
    ||||||||||| | ||||||||  |||| ||||||||| |||| | | ||||||||||||||| | | ||||| ||||||||||||||||||||||||||    
T  41943874 aggcaaaattataattttagtcccttaatttaatttcatgtaacaatttggtcctttatcttttttttcatttcaatttggtcctttttgtccattttca 41943973  T
Q  261 tatgaatttttaagcttaaaatt 283  Q
    |||  ||||| |||||| |||||    
T  41943974 tatacattttcaagcttcaaatt 41943996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 263
Target Start/End: Original strand, 11439804 - 11439900
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatat 263  Q
    ||||||||||||||||||  ||||||||||||||| ||| ||| ||||| ||||||||| | |||||| ||||||||| |||||||||||||| ||||    
T  11439804 aaaattacatttttagtcccttaacttaatttcagataacagtttggtcttttatcttt-tttcatttcaatttggtcatttttgtccatttttatat 11439900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 45214689 - 45214572
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcct-ttttgtccattttcatatg 264  Q
    |||||| || ||||||||  |||| |||||||||||||| ||| ||||||||||||||| | |||||| ||||||||||| |||||||||||| |||||     
T  45214689 aaaattgcacttttagtcccttaatttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtccttttttgtccatttccatata 45214590  T
Q  265 aatttttaagcttaaaat 282  Q
     ||||| |||||| ||||    
T  45214589 cattttcaagcttcaaat 45214572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 160 - 252
Target Start/End: Original strand, 50710889 - 50710982
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcc-tttatctttatatcattttaatttggtcctttttgtc 252  Q
    ||||||||||||||| ||||||||  ||||||||||||||||||| ||| |||||| ||||||||| | |||| | ||||||||||||||||||    
T  50710889 aaaggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtccttttatctttttttcatatcaatttggtcctttttgtc 50710982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 161 - 260
Target Start/End: Complemental strand, 2773461 - 2773361
Alignment:
Q  161 aaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaa-tttggtcctttttgtccattttc 259  Q
    |||||||||||||| ||||||| | ||||||||||||||||||| |   ||||||||||||||| | |||||| || ||||||| |||||||||||||||    
T  2773461 aaggcaaaattacacttttagtttattaacttaatttcaggtaacaacttggtcctttatctttttttcatttcaattttggtcttttttgtccattttc 2773362  T
Q  260 a 260  Q
    |    
T  2773361 a 2773361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 165 - 263
Target Start/End: Complemental strand, 53712559 - 53712465
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatat 263  Q
    |||||||||||||||||||  ||||||||||||||||||  ||| || |||||||| |||   ||||||||||||||| ||||||||||||||||||||    
T  53712559 caaaattacatttttagtcacttaacttaatttcaggtagcagtttgatcctttattttt---tcattttaatttggt-ctttttgtccattttcatat 53712465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 162 - 282
Target Start/End: Complemental strand, 21017240 - 21017116
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatat----cattttaatttggtcctttttgtccattt 257  Q
    ||||||||||||| |||||||   ||||||||||||||||||| ||| ||||| ||||||||| | |    ||||| |||||||||||||||||||||||    
T  21017240 aggcaaaattacacttttagttccttaacttaatttcaggtaacagtttggtcatttatctttttttttttcatttcaatttggtcctttttgtccattt 21017141  T
Q  258 tcatatgaatttttaagcttaaaat 282  Q
    | ||||  ||||| |||||| ||||    
T  21017140 ttatatacattttcaagcttcaaat 21017116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 282
Target Start/End: Original strand, 35747692 - 35747811
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||  | ||||||||||||||||||| |   ||||| ||||||||| | |||||| ||||||||| |||||||||||||||| |    
T  35747692 ggcaaaattacacttttagattcttaacttaatttcaggtaacatcttggtcttttatctttttttcatttcaatttggtcgtttttgtccattttcaaa 35747791  T
Q  263 tgaatttttaagcttaaaat 282  Q
    |  ||||| |||||| ||||    
T  35747792 tacattttcaagcttcaaat 35747811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 160 - 282
Target Start/End: Original strand, 2579092 - 2579214
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttc 259  Q
    ||||||||| ||||||||||| ||  |||||||||||| | ||||   | ||||||||||||||| | |||||| ||||| |||||||| ||| |||| |    
T  2579092 aaaggcaaatttacatttttaatcccttaacttaattttaagtaacgatttggtcctttatctttttttcatttcaattttgtccttttggtctatttgc 2579191  T
Q  260 atatgaatttttaagcttaaaat 282  Q
    ||||||||||| |||||| ||||    
T  2579192 atatgaattttcaagctttaaat 2579214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 160 - 282
Target Start/End: Original strand, 6953994 - 6954116
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttc 259  Q
    ||||| |||||| || ||||||||  |||||||||||| || ||| | | |||| |||||||||| | |||||| |||||||||||||| ||||||||||    
T  6953994 aaaggtaaaattccacttttagtcctttaacttaattttagataacaatttggttctttatctttttttcatttcaatttggtccttttagtccattttc 6954093  T
Q  260 atatgaatttttaagcttaaaat 282  Q
    ||||  ||||| |||||| ||||    
T  6954094 atatacattttcaagcttcaaat 6954116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 165 - 263
Target Start/End: Original strand, 44036689 - 44036786
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatat 263  Q
    |||||||| | ||||| ||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| ||||||||||||||| |||||||| ||||    
T  44036689 caaaattatagttttaatcccttaacttaatttcaggtaacagtttggtcctttatcttt-tttcatttcaatttggtcctttttatccatttttatat 44036786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 164 - 260
Target Start/End: Complemental strand, 18678214 - 18678118
Alignment:
Q  164 gcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttca 260  Q
    ||||||||||| ||||| |   ||||||||||||||| ||| ||  |||| |||||||||| | |||||| ||||||||||||||||||||||||||    
T  18678214 gcaaaattacacttttaattccttaacttaatttcagataacagcttggtactttatctttttttcatttcaatttggtcctttttgtccattttca 18678118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 263
Target Start/End: Complemental strand, 27812882 - 27812781
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatct----ttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||| ||||||||  ||||||||||||||| ||| ||| |||||||||||||    || | | ||||||||||||||||| ||||||||||||||    
T  27812882 aaaattacacttttagtcccttaacttaatttcagataacagtttggtcctttatcttttctttttttattttaatttggtccttattgtccattttcat 27812783  T
Q  262 at 263  Q
    ||    
T  27812782 at 27812781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 282
Target Start/End: Complemental strand, 49002552 - 49002430
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatc---tttatatcattttaatttggtcctttttgtccattttc 259  Q
    |||||| ||| | ||||||||  ||||||||||||||||||| ||| ||||||||||||   ||| | |||||| ||||||||| ||||||||||||||     
T  49002552 ggcaaatttatacttttagtcccttaacttaatttcaggtaacagtttggtcctttatcttttttttttcatttcaatttggtcatttttgtccattttt 49002453  T
Q  260 atatgaatttttaagcttaaaat 282  Q
    ||||  ||||| |||||| ||||    
T  49002452 atatacattttcaagcttcaaat 49002430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 221
Target Start/End: Complemental strand, 25061596 - 25061534
Alignment:
Q  159 taaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatc 221  Q
    |||||||||||||||| |||| |||| ||||||||||||||||||| ||| ||||||||||||    
T  25061596 taaaggcaaaattacacttttggtctcttaacttaatttcaggtaacagtttggtcctttatc 25061534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 163 - 283
Target Start/End: Original strand, 14626129 - 14626256
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatc-------tttatatcattttaatttggtcctttttgtccat 255  Q
    |||||||||||||||||||||  |||| |||||||||| ||| ||| ||||||||||||       ||| | | |||| |||||| ||||||||||||||    
T  14626129 ggcaaaattacatttttagtcccttaatttaatttcagataacagtttggtcctttatcttttttttttttttaatttcaatttgatcctttttgtccat 14626228  T
Q  256 tttcatatgaatttttaagcttaaaatt 283  Q
    ||||||||  ||||| |||||| |||||    
T  14626229 tttcatatacattttcaagctttaaatt 14626256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 15020276 - 15020392
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||||  ||||||||  |||||||||||  || ||| ||| |||| |||||||||| | |||||| ||||||||| ||||||| |||||||||||      
T  15020276 aaaattactcttttagtcccttaacttaattcaagataacagtttggttctttatctttttttcatttaaatttggtcttttttgttcattttcatatac 15020375  T
Q  266 atttttaagcttaaaat 282  Q
    ||||| |||||| ||||    
T  15020376 attttcaagcttcaaat 15020392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 263
Target Start/End: Original strand, 26844896 - 26844994
Alignment:
Q  164 gcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatat 263  Q
    ||||||||| ||||||||||  |||| ||||||| || |||  || |||| |||||||||| | |||||||||||||||  |||||||||||||||||||    
T  26844896 gcaaaattatatttttagtcccttaatttaattttagataactgtttggtgctttatctttttttcattttaatttggt-atttttgtccattttcatat 26844994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 166 - 263
Target Start/End: Original strand, 28843732 - 28843832
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctt---tatatcattttaatttggtcctttttgtccattttcata 262  Q
    ||||||||||||||||||  |||| |||||||||| ||| ||| || || ||||||||   | | |||||| ||||||||||||||| ||||||||||||    
T  28843732 aaaattacatttttagtcccttaatttaatttcagataacagtttgatcttttatcttctttttttcatttcaatttggtcctttttatccattttcata 28843831  T
Q  263 t 263  Q
    |    
T  28843832 t 28843832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 258
Target Start/End: Original strand, 18168753 - 18168850
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccatttt 258  Q
    ||||| ||||||||| ||||| ||  |||| |||||||| ||||| | | ||||||||||| ||| | | |||| ||||||||||||||||||||||||    
T  18168753 aaaggtaaaattacacttttaatcccttaatttaatttccggtaataatttggtcctttattttttttt-atttcaatttggtcctttttgtccatttt 18168850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 2397991 - 2397902
Alignment:
Q  272 aagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||| ||||||||| |||||||||||||||    || | ||||||||| |||| || || ||||| ||| ||||||||||||||||||    
T  2397991 aagcttcaaattcatggttttattttcttatgacatttcaatcttcaaatttatggtcttcatctatatttacataagaatattagattt 2397902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 228 - 327
Target Start/End: Complemental strand, 2579325 - 2579227
Alignment:
Q  228 tcattttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatga 327  Q
    |||||| ||||| || ||||| | |||||| |||||| ||||  |||||||||||||||| || |||||||||| ||||  | | |||||||||||||||    
T  2579325 tcatttcaattttgttcttttcggccatttgcatatggatttc-aagcttaaaattcatgtttgtattttcttaaggtctctcaatcttcaaatctatga 2579227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 263
Target Start/End: Complemental strand, 44977064 - 44976968
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatat 263  Q
    |||||||| | ||||| | | |||||||||| | |||||| ||| || |||||||||||| | |||||| |||||| |||||||| |||||||||||||    
T  44977064 caaaattatacttttattttcttaacttaatgttaggtaacagtttg-tcctttatcttttt-tcatttcaatttgatcctttttatccattttcatat 44976968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 153; Significance: 5e-81; HSPs: 91)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 165 - 361
Target Start/End: Original strand, 5747877 - 5748073
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatg 264  Q
    |||||||||||||||||||  |||| |||||||||||||| ||| ||||||||||||||| | |||||| ||||||||||||||||||||||||||||||    
T  5747877 caaaattacatttttagtcccttaatttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatg 5747976  T
Q  265 aatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5747977 aatttttaagcttaaaattcatgattttattttcttatggtctttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatataagattt 5748073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 162 - 361
Target Start/End: Complemental strand, 32922382 - 32922183
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| |||||||||||||||||||||||||||    
T  32922382 aggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcat 32922283  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||| |||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32922282 atgaaattttaaacttaaaattcatgattttattttcttatggtctttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 32922183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 166 - 361
Target Start/End: Original strand, 52537882 - 52538077
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  52537882 aaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcattttaatttggtcctttttgtccattttcatatga 52537981  T
Q  266 atttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    | |||||| |||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52537982 aattttaaacttaaaattcatgattttattttcttatggtttttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 52538077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 166 - 361
Target Start/End: Complemental strand, 26843110 - 26842916
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| |||||||||||||||||||||||||||||||    
T  26843110 aaaattacacttttagtcctttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatga 26843011  T
Q  266 atttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||| |||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  26843010 atttttaagc-taaaattcatgattttattttcttatagtccttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 26842916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 162 - 361
Target Start/End: Original strand, 39791916 - 39792115
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| ||||||||  ||||||||||||||||||| | | ||||||||||||||| | |||||| |||||||||||||||||||||||||||    
T  39791916 aggcaaaattacacttttagtcctttaacttaatttcaggtaacaatttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcat 39792015  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  39792016 atgaatttttaagcttaaaattcatgattttattttctgatggtccttcaatcttcaaatctatgatcatcgtctatgtttgcataaaaatattagattt 39792115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 163 - 361
Target Start/End: Original strand, 52653931 - 52654130
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatat-cattttaatttggtcctttttgtccattttcat 261  Q
    |||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | | ||||| |||||||||||||||||||||||| ||    
T  52653931 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatcttttttttcatttcaatttggtcctttttgtccatttttat 52654030  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  52654031 atgaatttttaagcttaaaattcatgattttattttcttatggtctttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatataagattt 52654130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 162 - 361
Target Start/End: Original strand, 45801218 - 45801416
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||| | ||||||||| |||| |||||||||||||| ||| ||||||||||||||| | |||||||||||||||| |||||||||||||||||    
T  45801218 aggcaaaattatacttttagtctcttaatttaatttcaggtaacagtttggtcctttatcttttt-tcattttaatttggtcttttttgtccattttcat 45801316  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||| |||||||||||||||||||||||||||| || || | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  45801317 atgaatttttaagtttaaaattcatgattttattttcttatgatctttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 45801416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 164 - 361
Target Start/End: Complemental strand, 35131109 - 35130912
Alignment:
Q  164 gcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatat 263  Q
    ||||||||||| ||||| ||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| |||||||||||||||||||||||||||||    
T  35131109 gcaaaattacacttttaatcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatat 35131010  T
Q  264 gaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||| ||||||| ||||||||||| ||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  35131009 gaacttttaagtttaaaattcataattttattttcttatggtctttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 35130912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 160 - 361
Target Start/End: Complemental strand, 16020274 - 16020073
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttc 259  Q
    ||||| ||||||||| |||||||   ||||||||||||||||||| ||| ||||| ||  | ||| | |||||| ||||||||| |||||||||||||||    
T  16020274 aaaggaaaaattacacttttagtaccttaacttaatttcaggtaatagtttggtctttattttttttttcatttcaatttggtcatttttgtccattttc 16020175  T
Q  260 atatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagat 359  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16020174 atatgaatttttaagcttaaaatttatgattttattttcttatggtccttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagat 16020075  T
Q  360 tt 361  Q
    ||    
T  16020074 tt 16020073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 160 - 361
Target Start/End: Complemental strand, 44551232 - 44551031
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttc 259  Q
    |||| |||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| ||||| |||||||||||||||||||    
T  44551232 aaagacaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttagtcctttttgtccattttc 44551133  T
Q  260 atatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagat 359  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| || | || |||||| ||||||||||||||||||||| |||||||||||||||    
T  44551132 atatgaatttttaagtttaaaattcatgattttattttcttatggtctttcaatcctcaaatttatgatcctcgtctatgtttgtataagaatattagat 44551033  T
Q  360 tt 361  Q
    ||    
T  44551032 tt 44551031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 162 - 353
Target Start/End: Original strand, 9902652 - 9902843
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| |||||||||||||||||| ||||||||    
T  9902652 aggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtcaattttcat 9902751  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaata 353  Q
    ||||||||||||| |||||||| |||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||| ||||    
T  9902752 atgaatttttaagtttaaaatttatgattttattttcttatggtctttcaatcttcaaatctatgatcctcgtctatgtttgcataataata 9902843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 163 - 361
Target Start/End: Original strand, 17362298 - 17362496
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatat-cattttaatttggtcctttttgtccattttcat 261  Q
    |||||||||||| ||||||||  ||||||||||||| | ||| ||| ||||||||||||||| | | ||||| ||||||||| |||||||||||||||||    
T  17362298 ggcaaaattacacttttagtcccttaacttaatttcggataacagtttggtcctttatcttttttttcatttcaatttggtcatttttgtccattttcat 17362397  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  17362398 atgaatttt-aagcttaaaattcatgattttattttcttatggtccttcagtcttcaaatttatgatcctcgtctatgtttgcataagaatattagattt 17362496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 162 - 357
Target Start/End: Complemental strand, 15516620 - 15516425
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| |||| |||  ||||||||||||||||||| | | | ||||||||| |||   |||||| |||||||||||||||||| ||||||||    
T  15516620 aggcaaaattacactttttgtcccttaacttaatttcaggtaacaatttagtcctttattttttattcatttgaatttggtcctttttgtcgattttcat 15516521  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattag 357  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  15516520 atgaatttttaagcttaaaattcatgatcttattttcttatggtccttcagtcttcaaatctatgatcctcgtctatgtttgcattagaatattag 15516425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 166 - 361
Target Start/End: Original strand, 26886613 - 26886808
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||| ||||||||||  ||||||||||||||| ||| ||| ||||||||||||||  | |||||| |||||| |||||||| |||||||||||||||    
T  26886613 aaaattatatttttagtcccttaacttaatttcagataatagtttggtcctttatcttattttcatttcaatttgttcctttttctccattttcatatga 26886712  T
Q  266 atttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  26886713 atttttaagcttaaaattcatgattttattttcttatggtctttcaatcttcaaatctatgatcctcatctatgtttacataagaatattagattt 26886808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 186 - 361
Target Start/End: Original strand, 46648092 - 46648267
Alignment:
Q  186 ttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaattca 285  Q
    ||||||||||||||||||| | | ||||||||||||||| | |||||| |||||| ||||||||||| ||||||||||||||||||||| ||||||||||    
T  46648092 ttaacttaatttcaggtaacaatttggtcctttatctttttttcatttcaatttgatcctttttgtctattttcatatgaatttttaagtttaaaattca 46648191  T
Q  286 tgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  46648192 tgattttattttcttatggtctttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 46648267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 161 - 361
Target Start/End: Original strand, 18568022 - 18568223
Alignment:
Q  161 aaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatc-attttaatttggtcctttttgtccattttc 259  Q
    |||||||||||||| ||||| ||| ||||||||||||||| ||| ||| ||||||||||||||| | |  |||| ||||||||| ||||||| |||||||    
T  18568022 aaggcaaaattacacttttaatctcttaacttaatttcagataacagtttggtcctttatctttttttttatttcaatttggtcttttttgttcattttc 18568121  T
Q  260 atatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagat 359  Q
    |||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  18568122 atatgaatttttaagcttaaaattcatgattttattttcttatgctctttcagtcttcaaatctatgatcatcgtctatgtttgcataagaatataagat 18568221  T
Q  360 tt 361  Q
    ||    
T  18568222 tt 18568223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 160 - 361
Target Start/End: Original strand, 25331812 - 25332015
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatat--cattttaatttggtcctttttgtccattt 257  Q
    ||||||||||||||| ||||||||  ||||||||||||||||||| | | || |||||||| ||| | |  ||||| |||||||||||||||||||||||    
T  25331812 aaaggcaaaattacacttttagtcccttaacttaatttcaggtaacaatttgatcctttatttttttttttcatttcaatttggtcctttttgtccattt 25331911  T
Q  258 tcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattag 357  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||| || | ||||||||||||||| |||||||||||||||||||||||||||||    
T  25331912 tcatatgaatttttaagtttaaaatttatgattttattttcttatggtctttcaatcttcaaatctatgaccctcgtctatgtttgcataagaatattag 25332011  T
Q  358 attt 361  Q
    ||||    
T  25332012 attt 25332015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 162 - 361
Target Start/End: Original strand, 36868031 - 36868230
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    |||||||||||||||||||||   |||| |||||||||| ||| ||| ||||||||||||||| | |||||| |||||||||||||||||| ||||||||    
T  36868031 aggcaaaattacatttttagttccttaatttaatttcagataacagtttggtcctttatctttttttcatttcaatttggtcctttttgtctattttcat 36868130  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |  ||||||||||||| ||||||| ||||    
T  36868131 atgaaattttaagcttaaaattcatgattttattttcttatggtctttcagtcttcaaatctatgatccttgcttatgtttgcataaaaatattaaattt 36868230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 160 - 361
Target Start/End: Original strand, 45655690 - 45655891
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttc 259  Q
    |||| |||||||||| ||||||||| ||||||||||||||||||| | | | ||| ||||||||| |||||||| |||||| || ||||| ||||||||     
T  45655690 aaagacaaaattacacttttagtctcttaacttaatttcaggtaacaattttgtcttttatctttttatcatttcaatttgatcatttttatccattttt 45655789  T
Q  260 atatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagat 359  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||| ||||||| |||||||||||||||||||||||| ||||    
T  45655790 atatgaatttttaagcttaaaatttatgattttattttcttatggtctttcagtcttcaaatttatgatcatcgtctatgtttgcataagaatataagat 45655889  T
Q  360 tt 361  Q
    ||    
T  45655890 tt 45655891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 165 - 361
Target Start/End: Complemental strand, 41376896 - 41376700
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatg 264  Q
    ||||||| || ||||||||  |||||||||||| || ||| ||| |||| |||||||||| | |||||| |||||| || |||||||||||||||||||     
T  41376896 caaaatttcacttttagtccattaacttaattttagataacagtttggttctttatctttttttcatttcaatttgatcatttttgtccattttcatata 41376797  T
Q  265 aatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
     ||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41376796 tatttttaagcttaaaattcatgattttattttcttatggtcttccagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 41376700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 160 - 355
Target Start/End: Original strand, 32488581 - 32488776
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttc 259  Q
    ||||||||||||||| ||||||||  ||||||| |||| |||||| | | | ||||||||||||| | |||||| ||||| ||||||||  ||||||| |    
T  32488581 aaaggcaaaattacacttttagtcccttaactttattttaggtaacaatttagtcctttatctttttttcatttcaattttgtccttttgatccatttac 32488680  T
Q  260 atatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatatt 355  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  32488681 atatgaatttttaagcttaaaatttatgattttattttcttatggtcttttagtcttcaaatctatgatccttgtctatgtttgcataagaatatt 32488776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 165 - 361
Target Start/End: Complemental strand, 10993933 - 10993741
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatg 264  Q
    |||||||||||||||| ||  ||||||||||||||||||   || ||||| ||||||||| | |||||| |||||||||||||| |||||||||||||||    
T  10993933 caaaattacatttttaatcccttaacttaatttcaggta---gtttggtcatttatctttttttcatttcaatttggtcctttt-gtccattttcatatg 10993838  T
Q  265 aatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||||||||||||||||||||||||||||| ||| || | |||||||||||| ||||||||||||||||||||||| ||||||| ||||    
T  10993837 aatttttaagcttaaaattcatgattttattttcttatagtctttcaatcttcaaatctacgatcctcgtctatgtttgcataaaaatattatattt 10993741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 165 - 323
Target Start/End: Original strand, 54036866 - 54037024
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatg 264  Q
    |||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| ||||||||||||||||||||||||||||||    
T  54036866 caaaattacacttttagtcccttaacttaatttcaggtaatagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatg 54036965  T
Q  265 aatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatct 323  Q
    ||||||||||||| |||||||||||||||||||||||||||| || | |||||||||||    
T  54036966 aatttttaagcttcaaattcatgattttattttcttatggtctttcaatcttcaaatct 54037024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 240 - 361
Target Start/End: Complemental strand, 41935730 - 41935609
Alignment:
Q  240 ggtcctttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatg 339  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||    
T  41935730 ggtcctttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttatggtctttcaatcttcaaatctatgatcctcgtctatg 41935631  T
Q  340 tttgcataagaatattagattt 361  Q
    ||||||||||||||||||||||    
T  41935630 tttgcataagaatattagattt 41935609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 161 - 361
Target Start/End: Original strand, 20983912 - 20984112
Alignment:
Q  161 aaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttca 260  Q
    |||||||||||||| |||| |||  ||||||| |||| |||||| | | | ||||||||||||| | |||||| ||||| ||||||||  ||||||| ||    
T  20983912 aaggcaaaattacacttttggtcccttaactttattttaggtaataatttagtcctttatctttttttcatttcaattttgtccttttgatccatttaca 20984011  T
Q  261 tatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagatt 360  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||  ||||||||||||||||| |||    
T  20984012 tatgaatttttaagcttaaaattcatgattttattttcttatggtctttcagtcttcaaatctatgatccttgtctaaatttgcataagaatattaaatt 20984111  T
Q  361 t 361  Q
    |    
T  20984112 t 20984112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 213 - 361
Target Start/End: Original strand, 22539737 - 22539885
Alignment:
Q  213 tcctttatctttatatcattttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttag 312  Q
    |||||||||||| | |||||| |||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||    
T  22539737 tcctttatctttttttcatttcaatttgctcttttttgtccattttcatatgaatttttaaggttaaaattcatgattttattttcttatggtctttcag 22539836  T
Q  313 tcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  22539837 tcttcaaatctataatcctcttctatgtttgcataagaatattagattt 22539885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 165 - 361
Target Start/End: Original strand, 44834981 - 44835171
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatg 264  Q
    |||||||||| ||||| ||  ||||||||||||||||||| ||| |||| |||||| ||      ||||||||||| |||||||||||||||||||||||    
T  44834981 caaaattacacttttaatcccttaacttaatttcaggtaacagtttggttctttatttt------attttaatttgatcctttttgtccattttcatatg 44835074  T
Q  265 aatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    || |||||||||||||||| ||||||||| |||||||||||  || | |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  44835075 aacttttaagcttaaaattaatgattttactttcttatggtttttcaatcttcaaatctatgatcctcgtctatgtttgcataaaaatattagattt 44835171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 165 - 361
Target Start/End: Complemental strand, 16530630 - 16530434
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatg 264  Q
    |||||||| | ||||||||  |||||||||||||| |||| ||| | ||  |||||  || | |||||| ||||||||||||||||||||||||||||||    
T  16530630 caaaattatacttttagtcccttaacttaatttcaagtaacagtttagttttttattcttttttcatttcaatttggtcctttttgtccattttcatatg 16530531  T
Q  265 aatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||| |||||||||||||||||||||| || | | ||||||||||| ||||||||||||  |||||||||||||||||||||    
T  16530530 aatttttaagcttaaaatttatgattttattttcttatggtctttcaattttcaaatctattatcctcgtctatacttgcataagaatattagattt 16530434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 164 - 355
Target Start/End: Original strand, 23572602 - 23572793
Alignment:
Q  164 gcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatat 263  Q
    ||||||||||||||||||||  ||||||| |||| |||| | |||   ||||||||||||| | |||||| ||||| ||||||||  ||||||| |||||    
T  23572602 gcaaaattacatttttagtcccttaactttattttaggttacagttgagtcctttatctttttttcatttcaattttgtccttttgatccatttacatat 23572701  T
Q  264 gaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatatt 355  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || | ||||||||| ||||||||| |||||||||||||||||||||||    
T  23572702 gaatttttaagctgaaaattcatgattttattttcttatggtctttcaatcttcaaatttatgatccttgtctatgtttgcataagaatatt 23572793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 186 - 361
Target Start/End: Original strand, 32187936 - 32188112
Alignment:
Q  186 ttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttt-tgtccattttcatatgaatttttaagcttaaaattc 284  Q
    |||| |||||||||| ||| ||| |||||||||||  || | |||||| ||||| || ||||| |||||||||||||| ||| ||||||| |||||||||    
T  32187936 ttaatttaatttcagataacagtttggtcctttattcttttttcatttcaatttagttcttttttgtccattttcatacgaaattttaagtttaaaattc 32188035  T
Q  285 atgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  32188036 atgattttattttcttatggtctttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 32188112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 228 - 361
Target Start/End: Complemental strand, 38556191 - 38556058
Alignment:
Q  228 tcattttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatga 327  Q
    |||||||||||| ||| |||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||    
T  38556191 tcattttaatttagtcatttttgtccattttcatatacatttttaagcttaagattcatgattttattttcttatgatcttttagtcttcaaatctatga 38556092  T
Q  328 tcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||||||| |||| ||||||||||||    
T  38556091 tcctcgtctatgtttgtataataatattagattt 38556058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 163 - 361
Target Start/End: Complemental strand, 26948299 - 26948108
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatat-cattttaatttggtcctttttgtccattttcat 261  Q
    |||||||||| ||||||||||  ||||||||||||||||||| | | |||| |||||||||| | | ||||| |||| ||||||||||||||||||||||    
T  26948299 ggcaaaattatatttttagtcccttaacttaatttcaggtaacattttggtgctttatcttttttttcatttcaattgggtcctttttgtccattttcat 26948200  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| || | ||||||        ||| |||||||||||||||||||||||||| ||||    
T  26948199 atgaatttttaagtttaaaattcatgattttattttcttatggtctttcaatcttca--------atcatcgtctatgtttgcataagaatattatattt 26948108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 163 - 355
Target Start/End: Original strand, 31857582 - 31857773
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||||||||||||  |||| || |||| | |||| ||| |  || ||||||||| | |||||| ||||| || |||||  ||||||| ||||    
T  31857582 ggcaaaattacatttttagtcc-ttaattttattttaagtaacagtttattcttttatctttttttcatttcaattttgttcttttgatccatttacata 31857680  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatatt 355  Q
    |||||||||||| ||||||||||||||||||||||| ||||||| || ||||||||||||||||||||| |||||||||||||||| ||||||    
T  31857681 tgaatttttaagattaaaattcatgattttattttcctatggtctttcagtcttcaaatctatgatccttgtctatgtttgcataataatatt 31857773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 246 - 361
Target Start/End: Original strand, 7067325 - 7067440
Alignment:
Q  246 ttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgca 345  Q
    |||| |||||||||||||||| ||||||| |||||||||||||||||||||| |||||||  || |||||||||||||||||||||||||||||||||||    
T  7067325 ttttatccattttcatatgaaattttaagtttaaaattcatgattttatttttttatggtgtttcagtcttcaaatctatgatcctcgtctatgtttgca 7067424  T
Q  346 taagaatattagattt 361  Q
    ||||||||||||||||    
T  7067425 taagaatattagattt 7067440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 226 - 361
Target Start/End: Complemental strand, 46674842 - 46674707
Alignment:
Q  226 tatcattttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctat 325  Q
    |||||||| |||||||||||||| || |||||||||||  |||||||||||||||||| ||||||||||||| ||||| || |||| ||||||||||||     
T  46674842 tatcatttcaatttggtccttttggttcattttcatatatatttttaagcttaaaatttatgattttatttttttatgatcttttaatcttcaaatctac 46674743  T
Q  326 gatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||||||||| |||||||||||||||||    
T  46674742 gatcctcgtctatgtttgtataagaatattagattt 46674707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 228 - 360
Target Start/End: Original strand, 24270427 - 24270559
Alignment:
Q  228 tcattttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatga 327  Q
    ||||||||||| ||| |||||| || ||||| ||||||| |||||||||||||||||||||||||||||| |||||||| || ||||||||||| |||||    
T  24270427 tcattttaattaggtactttttatctatttttatatgaacttttaagcttaaaattcatgattttatttttttatggtctttcagtcttcaaatttatga 24270526  T
Q  328 tcctcgtctatgtttgcataagaatattagatt 360  Q
    | ||| |||||||||||||||||||||||||||    
T  24270527 ttctcttctatgtttgcataagaatattagatt 24270559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 160 - 283
Target Start/End: Complemental strand, 20984231 - 20984108
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttc 259  Q
    ||||||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| |||||||||||||||||||||||||    
T  20984231 aaaggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttc 20984132  T
Q  260 atatgaatttttaagcttaaaatt 283  Q
    ||||  ||||| |||||| |||||    
T  20984131 atatacattttcaagcttcaaatt 20984108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 166 - 361
Target Start/End: Original strand, 43264080 - 43264269
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||| | ||||||||  |||||||||||| || ||| | | ||||||||||||||| | |||||| ||||| ||| ||||  ||||||| |||||||    
T  43264080 aaaattatacttttagtccattaacttaattttagataataatttggtcctttatctttttttcatttcaattttgtcattttgatccatttacatatga 43264179  T
Q  266 atttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatcta-tgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||||||||||       ||||||||||||||| || |||||||||||||| | |||||||||||| ||||||||||| ||||||||||    
T  43264180 atttttaagcttaaaattc-------tattttcttatggtctttcagtcttcaaatctatttatcctcgtctatatttgcataagagtattagattt 43264269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 161 - 282
Target Start/End: Original strand, 41935491 - 41935612
Alignment:
Q  161 aaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttca 260  Q
    |||| ||||||||||||||||||| ||||||||||||||||||| |||  |||||||||||||| | ||||||||||||||||||||||||||||||| |    
T  41935491 aaggtaaaattacatttttagtctcttaacttaatttcaggtaacagttcggtcctttatctttttttcattttaatttggtcctttttgtccattttta 41935590  T
Q  261 tatgaatttttaagcttaaaat 282  Q
    |||  ||||| |||||| ||||    
T  41935591 tatacattttcaagcttcaaat 41935612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 16019956 - 16020076
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| ||||||||  ||||||||||||||||||| ||| || |||||||||||| | |||||| |||||||||||||||||||||||||||    
T  16019956 aggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttgatcctttatctttttttcatttcaatttggtcctttttgtccattttcat 16020055  T
Q  262 atgaatttttaagcttaaaat 282  Q
    ||  ||||| |||||| ||||    
T  16020056 atacattttcaagcttcaaat 16020076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 162 - 282
Target Start/End: Complemental strand, 52654247 - 52654127
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| ||||||||||||||||||||||||||     
T  52654247 aggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcaa 52654148  T
Q  262 atgaatttttaagcttaaaat 282  Q
    ||  ||||| |||||| ||||    
T  52654147 atacattttcaagcttcaaat 52654127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 163 - 282
Target Start/End: Complemental strand, 43264385 - 43264266
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||||||||||||  ||||||||||||||||||| ||| | ||||||||||||| | |||||| ||||||||| ||||||||||||||||||    
T  43264385 ggcaaaattacatttttagtcctttaacttaatttcaggtaacagttttgtcctttatctttttttcatttcaatttggtcttttttgtccattttcata 43264286  T
Q  263 tgaatttttaagcttaaaat 282  Q
    |  ||||| |||||| ||||    
T  43264285 tacattttcaagcttcaaat 43264266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 286 - 361
Target Start/End: Original strand, 46689280 - 46689355
Alignment:
Q  286 tgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46689280 tgattttattttcttatggtctttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 46689355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 163 - 277
Target Start/End: Original strand, 15516306 - 15516420
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||| ||||||||||||||| |  ||||| |||||| |||||||||||||||||||||    
T  15516306 ggcaaaattacacttttagtccgttaacttaatttcaggtaatagtttggtcctttatcttttttccatttcaatttgctcctttttgtccattttcata 15516405  T
Q  263 tgaatttttaagctt 277  Q
    |  ||||| ||||||    
T  15516406 tacattttcaagctt 15516420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 166 - 361
Target Start/End: Original strand, 9644755 - 9644960
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtccttta-----tctttatatcattttaatttggtcctttttgtccattttca 260  Q
    ||||||||||||||||||  |||||||||||| |||||| | | ||||||||||     ||||| | || ||| ||||| ||  |||| |||||||| ||    
T  9644755 aaaattacatttttagtcccttaacttaattttaggtaacaatttggtcctttagtttatctttttttcttttcaattttgtatttttagtccatttaca 9644854  T
Q  261 tatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgat-----cctcgtctatgtttgcataagaatatt 355  Q
    ||||||||||||||||| |||| ||||||||||||||||||||| | ||  |||||||||||||||||     | || | ||||||||||||||||||||    
T  9644855 tatgaatttttaagctttaaatccatgattttattttcttatggcctttccgtcttcaaatctatgatatgatcttcatttatgtttgcataagaatatt 9644954  T
Q  356 agattt 361  Q
    | ||||    
T  9644955 atattt 9644960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 10993624 - 10993744
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| ||||||||  ||||||||||||||||||| | | ||||||||||||||| | |||||| |||||||||||||||||||||||| ||    
T  10993624 aggcaaaattacacttttagtcccttaacttaatttcaggtaacaatttggtcctttatctttttttcatttcaatttggtcctttttgtccatttttat 10993723  T
Q  262 atgaatttttaagcttaaaat 282  Q
    ||  ||||| |||||| ||||    
T  10993724 atacattttcaagcttcaaat 10993744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 166 - 361
Target Start/End: Complemental strand, 53563434 - 53563239
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||||||||||||||  |||||||||||| || ||| | | | ||| ||||||||| | |||||| | |||||||||||| |||||||| |||||      
T  53563434 aaaattacatttttagtcccttaacttaattttagataacaatttagtcatttatctttttttcatttcactttggtccttttggtccatttgcatattg 53563335  T
Q  266 atttttaagcttaaaattcatgattttattttcttatggtcct-ttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||| |||||||||||||||| ||||||||||||| || ||| | | ||||||||| |||| || || ||||||||||||||  | ||||||||||    
T  53563334 attttcaagcttaaaattcatgtttttattttctta-ggacctctcaatcttcaaatatatggtcttcatctatgtttgcatataattattagattt 53563239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 163 - 262
Target Start/End: Complemental strand, 52538193 - 52538094
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| |||||| |||||||||||||||||||||    
T  52538193 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttgatcctttttgtccattttcata 52538094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 162 - 359
Target Start/End: Complemental strand, 23963163 - 23962965
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtccttt-atctttatatcattttaatttggtcctttttgtccattttca 260  Q
    |||| |||||||| ||||||||  |||||||||||| |||||| | | | ||||||| |||||| | |||||| |||||  ||||||| || ||||| ||    
T  23963163 aggctaaattacacttttagtcccttaacttaattttaggtaacaatttcgtccttttatctttttttcatttcaattttatccttttggttcatttgca 23963064  T
Q  261 tatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagat 359  Q
    |||||||||| || ||| ||||||||| |||||||||||||||    || | |||||||||||||| |  || ||||||||||||||| ||||||||||    
T  23963063 tatgaattttcaaacttcaaattcatggttttattttcttatgacatttcaatcttcaaatctatggttttcatctatgtttgcataacaatattagat 23962965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 165 - 282
Target Start/End: Complemental strand, 17362610 - 17362493
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatg 264  Q
    |||||||||| ||||||||  |||||||||||||| |||| ||| ||||||||| ||||| | |||||| |||||||||||||||||||||||||||||     
T  17362610 caaaattacacttttagtcctttaacttaatttcaagtaacagtttggtcctttgtctttttctcatttcaatttggtcctttttgtccattttcatata 17362511  T
Q  265 aatttttaagcttaaaat 282  Q
     ||||| |||||| ||||    
T  17362510 cattttcaagcttcaaat 17362493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 166 - 283
Target Start/End: Complemental strand, 23572912 - 23572795
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||||| ||||||||  |||||||||||| ||| || ||| ||||| ||||||||| | ||||||||||||||||||||||||||||||||||||      
T  23572912 aaaattacacttttagtcccttaacttaattttaggcaatagtttggtcatttatctttttctcattttaatttggtcctttttgtccattttcatatac 23572813  T
Q  266 atttttaagcttaaaatt 283  Q
    ||||| |||||| |||||    
T  23572812 attttcaagcttcaaatt 23572795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 161 - 282
Target Start/End: Original strand, 26842798 - 26842919
Alignment:
Q  161 aaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttca 260  Q
    |||| ||||||||| |||||||   ||||||||||||||||||| ||| |||| |||||||||| | |||||| ||||||||||||||||||||||||||    
T  26842798 aaggtaaaattacacttttagttccttaacttaatttcaggtaacagtttggttctttatctttttttcatttcaatttggtcctttttgtccattttca 26842897  T
Q  261 tatgaatttttaagcttaaaat 282  Q
    |||  ||||| |||||| ||||    
T  26842898 tatacattttcaagcttcaaat 26842919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 162 - 263
Target Start/End: Original strand, 41376583 - 41376684
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||| | | |||||| ||||| |||||||||||||||||||||    
T  41376583 aggcaaaattacacttttagtcccttaacttaatttcaggtaatagtttggtcctttatctgtttttcatttcaattttgtcctttttgtccattttcat 41376682  T
Q  262 at 263  Q
    ||    
T  41376683 at 41376684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 162 - 282
Target Start/End: Complemental strand, 26886925 - 26886805
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||||||||||||  |||||||||||||| |||| ||| ||||||||||||||| | |||||| |||||| || |||||||||||||| ||    
T  26886925 aggcaaaattacatttttagtcccttaacttaatttcaagtaacagtttggtcctttatctttttttcatttcaatttgatcttttttgtccatttttat 26886826  T
Q  262 atgaatttttaagcttaaaat 282  Q
    ||  ||||| |||||| ||||    
T  26886825 atacattttcaagcttcaaat 26886805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 163 - 283
Target Start/End: Complemental strand, 31857895 - 31857775
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| |||||||   ||||||||||||||||||| ||| |||| |||||||||| | |||||| ||||| ||||||||||||||||||||||    
T  31857895 ggcaaaattacacttttagttccttaacttaatttcaggtaacagtttggttctttatctttttttcatttcaatttagtcctttttgtccattttcata 31857796  T
Q  263 tgaatttttaagcttaaaatt 283  Q
    |  ||||| |||||| |||||    
T  31857795 tacattttcaagcttcaaatt 31857775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 163 - 282
Target Start/End: Complemental strand, 9902970 - 9902851
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||| ||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| ||||||||| |||||||||||||| |||    
T  9902970 ggcaaaattacacttttaatcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcatttttgtccatttttata 9902871  T
Q  263 tgaatttttaagcttaaaat 282  Q
    |  ||||| |||||| ||||    
T  9902870 tacattttcaagcttcaaat 9902851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 163 - 262
Target Start/End: Original strand, 32922067 - 32922166
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  ||||||||||||||||||| ||| ||||| ||||||||| | |||||| |||||| |||||||||||||||||||||    
T  32922067 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcatttatctttttttcatttcaatttgatcctttttgtccattttcata 32922166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 165 - 262
Target Start/End: Complemental strand, 7067554 - 7067457
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||| ||||||||  ||||||||||||||||||| ||| || |||||||||||| | |||||| |||||| |||||||||||||||||||||    
T  7067554 caaaattacacttttagtcccttaacttaatttcaggtaacagtttgatcctttatctttttttcatttcaatttgatcctttttgtccattttcata 7067457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 162 - 283
Target Start/End: Complemental strand, 32488899 - 32488778
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    |||||||||||||  |||||||  ||||||||||||||||||| ||| ||||| ||||||||| | |||||| ||||||  |||||||||||||||||||    
T  32488899 aggcaaaattacacgtttagtcctttaacttaatttcaggtaatagtttggtcttttatctttttttcatttcaatttgtacctttttgtccattttcat 32488800  T
Q  262 atgaatttttaagcttaaaatt 283  Q
    ||  ||||| |||||| |||||    
T  32488799 atacattttcaagcttcaaatt 32488778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 162 - 263
Target Start/End: Complemental strand, 49387497 - 49387397
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||| | ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||||||||||||||||||| || ||||||||    
T  49387497 aggcaaaattatacttttagtcccttaacttaatttcaggtaacagtttggtcctttatcttt-tttcattttaatttggtcctttttatctattttcat 49387399  T
Q  262 at 263  Q
    ||    
T  49387398 at 49387397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 163 - 282
Target Start/End: Complemental strand, 45656006 - 45655888
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  |||||||||||| |||||| ||| ||||| ||||||||| | |||||| |||||||||||||||||||||||||| |    
T  45656006 ggcaaaattacacttttagtcccttaacttaattttaggtaacagtttggtcatttatcttt-tttcatttcaatttggtcctttttgtccattttcaaa 45655908  T
Q  263 tgaatttttaagcttaaaat 282  Q
    |  ||||| |||||| ||||    
T  45655907 tacattttcaagcttcaaat 45655888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 167 - 282
Target Start/End: Complemental strand, 46689467 - 46689352
Alignment:
Q  167 aaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatgaa 266  Q
    |||||||| ||||||| | ||||||||||||||||||| ||| | ||||||||||||| | |||||| |||||| |||||||||||||||||| |||  |    
T  46689467 aaattacacttttagtttcttaacttaatttcaggtaacagtttcgtcctttatctttttttcatttcaatttgatcctttttgtccattttcgtataca 46689368  T
Q  267 tttttaagcttaaaat 282  Q
    |||| |||||| ||||    
T  46689367 ttttcaagcttcaaat 46689352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 266 - 361
Target Start/End: Original strand, 49387287 - 49387381
Alignment:
Q  266 atttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||| ||||| ||| ||||||||||||||||||||  || |||||||||||||||||| ||||||||||||||||||  ||||||||||||    
T  49387287 atttttaagtttaaa-ttcgtgattttattttcttatggtatttcagtcttcaaatctatgattctcgtctatgtttgcatagcaatattagattt 49387381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 164 - 282
Target Start/End: Original strand, 38555943 - 38556061
Alignment:
Q  164 gcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatat 263  Q
    ||||||||||| ||||||||  ||||||||||||||| ||| ||| || |||||||||||| | |||||| |||||| |||||||| |||||||||||||    
T  38555943 gcaaaattacacttttagtcccttaacttaatttcagataacagtttgatcctttatctttttttcatttcaatttgatcctttttatccattttcatat 38556042  T
Q  264 gaatttttaagcttaaaat 282  Q
      ||||| |||||| ||||    
T  38556043 acattttcaagcttcaaat 38556061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 16530317 - 16530437
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| ||||||||  ||||||||||||||||||| | | ||||| ||||||||| | |||||| ||||  |||||||||||||||||| ||    
T  16530317 aggcaaaattacacttttagtcccttaacttaatttcaggtaacaatttggtcatttatctttttttcatttcaattgagtcctttttgtccatttttat 16530416  T
Q  262 atgaatttttaagcttaaaat 282  Q
    ||  ||||| |||||| ||||    
T  16530417 atacattttcaagcttcaaat 16530437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 163 - 282
Target Start/End: Complemental strand, 18568340 - 18568220
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatc-tttatatcattttaatttggtcctttttgtccattttcat 261  Q
    |||||||||||| |||||||   ||||||||||||||||||| ||  |||||||||||| ||| | |||||| ||||||||||||||||||||||||||     
T  18568340 ggcaaaattacacttttagttccttaacttaatttcaggtaacagcttggtcctttatcttttttttcatttcaatttggtcctttttgtccattttcaa 18568241  T
Q  262 atgaatttttaagcttaaaat 282  Q
    ||  ||||| |||||| ||||    
T  18568240 atacattttcaagcttcaaat 18568220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 26947996 - 26948111
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||||||||||||||  ||||||||||||||| ||| ||| ||||  ||||||||| | |||||| |||||||||||||||||||||||| ||||      
T  26947996 aaaattacatttttagtcctttaacttaatttcagataacagt-tggtattttatctttttttcatttcaatttggtcctttttgtccatttttatatac 26948094  T
Q  266 atttttaagcttaaaat 282  Q
    ||||| |||||| ||||    
T  26948095 attttcaagcttcaaat 26948111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 39792230 - 39792112
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatc--tttatatcattttaatttggtcctttttgtccattttcatat 263  Q
    ||||||||||||||||||  ||||||||||||||||||| | | ||||||||||||  ||| | |||||| |||||| || ||||||||||||||||| |    
T  39792230 aaaattacatttttagtcccttaacttaatttcaggtaacaatttggtcctttatctttttttttcatttaaatttgatcatttttgtccattttcatgt 39792131  T
Q  264 gaatttttaagcttaaaat 282  Q
      |||||||||||| ||||    
T  39792130 acatttttaagcttcaaat 39792112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 233 - 361
Target Start/End: Original strand, 18635910 - 18636038
Alignment:
Q  233 ttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctc 332  Q
    ||||||| ||||||||  |||||||  |||||||| || |||||| ||| ||||| |||||||||||||||  | || | |||||||||| ||| || ||    
T  18635910 ttaattttgtccttttgatccatttatatatgaatgttcaagctttaaactcatgcttttattttcttatgacctttcaatcttcaaatccatggtcttc 18636009  T
Q  333 gtctatgtttgcataagaatattagattt 361  Q
     |||||||||| |||||||||||||||||    
T  18636010 atctatgtttgtataagaatattagattt 18636038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 164 - 304
Target Start/End: Original strand, 49498426 - 49498566
Alignment:
Q  164 gcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatat 263  Q
    ||||||||||| ||||||    || ||||||||| |||||| | | ||||||||||||||| | | |||| |||||  ||||||| |||||||| |||||    
T  49498426 gcaaaattacaattttagctccttgacttaattttaggtaacaatttggtcctttatctttttttaatttcaattttatccttttggtccatttgcatat 49498525  T
Q  264 gaatttttaagcttaaaattcatgattttattttcttatgg 304  Q
    ||||||| || ||| ||||||||| ||||||||||| ||||    
T  49498526 gaattttcaaacttcaaattcatggttttattttctcatgg 49498566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 302
Target Start/End: Complemental strand, 54997169 - 54997032
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  |||||||||||| | |||| | | ||  |||||| |||| | |||||| ||||| |||||||| |||||||| ||||    
T  54997169 ggcaaaattacaattttagtcacttaacttaattttaagtaacaatttgacccttta-cttttt-tcatttcaattttgtccttttggtccatttacata 54997072  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttat 302  Q
    |||||||| |||||| ||||| ||| ||||||||||||||    
T  54997071 tgaattttcaagcttcaaatttatggttttattttcttat 54997032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 163 - 282
Target Start/End: Original strand, 44550909 - 44551034
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatcttta------tatcattttaatttggtcctttttgtccatt 256  Q
    |||||||||||| ||||||||  |||||||||||||| |||| ||| ||||||||||| ||||      | |||||| ||||||||||||||||||||||    
T  44550909 ggcaaaattacacttttagtcccttaacttaatttcatgtaacagtttggtcctttatttttatttttttttcatttcaatttggtcctttttgtccatt 44551008  T
Q  257 ttcatatgaatttttaagcttaaaat 282  Q
    || ||||  ||||| |||||| ||||    
T  44551009 tttatatacattttcaagcttcaaat 44551034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 162 - 282
Target Start/End: Complemental strand, 22540002 - 22539882
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatat-cattttaatttggtcctttttgtccattttca 260  Q
    ||||||||||||| ||||||||  ||||||||||||||| ||| | | |  |||||||||||| | | ||||| ||||||||||||||||||||||||||    
T  22540002 aggcaaaattacacttttagtcccttaacttaatttcag-taacaatttaatcctttatcttttttttcatttcaatttggtcctttttgtccattttca 22539904  T
Q  261 tatgaatttttaagcttaaaat 282  Q
    |||  ||||| |||||| ||||    
T  22539903 tatacattttcaagcttcaaat 22539882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 163 - 263
Target Start/End: Original strand, 35130791 - 35130896
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatc-----tttatatcattttaatttggtcctttttgtccattt 257  Q
    |||||||||||| ||||| ||  ||||||||||||||||||| ||| ||||||||||||     ||| | |||||| |||||||||||||||||||||||    
T  35130791 ggcaaaattacacttttaatcccttaacttaatttcaggtaacagtttggtcctttatcttttttttttttcatttcaatttggtcctttttgtccattt 35130890  T
Q  258 tcatat 263  Q
    | ||||    
T  35130891 ttatat 35130896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 164 - 260
Target Start/End: Complemental strand, 5748176 - 5748080
Alignment:
Q  164 gcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttca 260  Q
    ||||||||||| ||||| |   ||||||||||||||| ||| ||  |||| |||||||||| | |||||| ||||||||||||||||||||||||||    
T  5748176 gcaaaattacacttttaattccttaacttaatttcagataacagcttggtactttatctttttttcatttcaatttggtcctttttgtccattttca 5748080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 164 - 303
Target Start/End: Complemental strand, 50512803 - 50512661
Alignment:
Q  164 gcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatc---tttatatcattttaatttggtcctttttgtccattttca 260  Q
    ||||||||||| ||||||||| |||||||||||||| |||| | | | ||| ||||||   ||| | |||||| ||||| ||| ||||  |||||||  |    
T  50512803 gcaaaattacaattttagtcttttaacttaatttcaagtaacaattttgtcatttatcttttttttttcatttcaatttcgtcattttgatccatttaaa 50512704  T
Q  261 tatgaatttttaagcttaaaattcatgattttattttcttatg 303  Q
    |||||||||| |||||| ||||||||  |||||||||||||||    
T  50512703 tatgaattttcaagcttcaaattcatagttttattttcttatg 50512661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 162 - 361
Target Start/End: Complemental strand, 30637261 - 30637062
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    |||||||||||||  ||||||   ||||  |||||| |||||| |||  |||||||||||||| | |||||| |||||   ||||||  ||||||| |||    
T  30637261 aggcaaaattacaagtttagttccttaaaataatttaaggtaacagttcggtcctttatctttttttcatttcaatttttcccttttgatccatttgcat 30637162  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||  ||||| |||||  ||||||||| |||||  || ||||||   || | ||||||||| ||||||| |  ||||||||| ||||||||||||||||||    
T  30637161 atttattttcaagctccaaattcatggttttaactttttatggcatttcaatcttcaaatttatgatctttatctatgtttacataagaatattagattt 30637062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 361
Target Start/End: Original strand, 37068738 - 37068811
Alignment:
Q  286 tgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||||||||| || || | |||||||||||||||| | ||||||||||||||||||||||||||||||    
T  37068738 tgattttattttcttatg-tctttcaatcttcaaatctatgattc-cgtctatgtttgcataagaatattagattt 37068811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 148 - 303
Target Start/End: Complemental strand, 17040239 - 17040082
Alignment:
Q  148 ctttgtttaattaaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcatt--ttaatttggtcct 245  Q
    ||||||||||||  ||||||||||||| |  | |||  ||||||||||||||| ||| | | ||||||||||||||| | |||||  ||  |||  ||||    
T  17040239 ctttgtttaattttaggcaaaattacactcatggtcccttaacttaatttcagttaacaatttggtcctttatctttttttcattgtttttttttatcct 17040140  T
Q  246 ttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttatg 303  Q
    ||| || ||||| |||||| ||||| |||||| ||||  |||||||||||||||||||    
T  17040139 tttggttcatttgcatatggattttcaagcttcaaatctatgattttattttcttatg 17040082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 165 - 282
Target Start/End: Original strand, 30636949 - 30637065
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatg 264  Q
    |||||||||| ||| ||||  |||||||||||||| |||| ||| |||||||| |||||| | | |||| ||||| |||||||| ||||| |||||||||    
T  30636949 caaaattacactttgagtcccttaacttaatttcaagtaacagtttggtccttaatctttttttaatttcaattttgtccttttggtcca-tttcatatg 30637047  T
Q  265 aatttttaagcttaaaat 282  Q
     ||||| |||||| ||||    
T  30637048 gattttcaagcttcaaat 30637065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 162 - 263
Target Start/End: Complemental strand, 36868347 - 36868246
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||| |||||||||   ||||||||||||||| |||  || ||||| ||||||||| | | |||| ||||||||| ||||||| |||||||||    
T  36868347 aggcaaaattatatttttagttccttaacttaatttcagataaatgtttggtcatttatcttttttttatttcaatttggtcatttttgttcattttcat 36868248  T
Q  262 at 263  Q
    ||    
T  36868247 at 36868246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 270
Target Start/End: Original strand, 53563124 - 53563230
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  ||||||||||| || |||| ||| ||||||||||||||| | |||||| ||||| ||| |||| || ||||| ||||    
T  53563124 ggcaaaattacacttttagtca-ttaacttaattgcaagtaacagtttggtcctttatctttttttcatttcaattttgtctttttggttcatttgcata 53563222  T
Q  263 tgaatttt 270  Q
    || |||||    
T  53563223 tggatttt 53563230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 361
Target Start/End: Original strand, 5618209 - 5618318
Alignment:
Q  252 ccattttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaa 351  Q
    |||||| |||||||||||| |||||| | |||||||||||||||||||||| |   |  |||||||||||  ||| ||  | |||||||||||| || ||    
T  5618209 ccatttgcatatgaattttcaagcttcatattcatgattttattttcttatagctttccagtcttcaaattcatggtctacatctatgtttgcagaataa 5618308  T
Q  352 tattagattt 361  Q
    ||||||||||    
T  5618309 tattagattt 5618318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 157 - 260
Target Start/End: Complemental strand, 44835282 - 44835178
Alignment:
Q  157 attaaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatc-tttatatcattttaatttggtcctttttgtccat 255  Q
    |||| ||||||||||| |||||| |||  |||||||||||||||||||  || |||| || |||| ||| | |||||| |||||||| |||| |||||||    
T  44835282 attataggcaaaattatatttttggtcacttaacttaatttcaggtaacggtttggtgctctatcttttttttcatttcaatttggttctttctgtccat 44835183  T
Q  256 tttca 260  Q
    |||||    
T  44835182 tttca 44835178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 213
Target Start/End: Complemental strand, 41944212 - 41944161
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggt 213  Q
    ||||||||||||||||||||||  ||||||||||||||||||| ||| ||||    
T  41944212 aggcaaaattacatttttagtcccttaacttaatttcaggtaacagtttggt 41944161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 224
Target Start/End: Complemental strand, 46648335 - 46648276
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatcttt 224  Q
    |||||||||||||||||||  ||||||||||||||||||| ||| || || |||||||||    
T  46648335 caaaattacatttttagtcccttaacttaatttcaggtaacagtttgatcatttatcttt 46648276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 282
Target Start/End: Complemental strand, 25332066 - 25332012
Alignment:
Q  228 tcattttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaat 282  Q
    ||||||||||||||||||||||||||||||| ||||  ||||| |||||| ||||    
T  25332066 tcattttaatttggtcctttttgtccatttttatatacattttcaagcttcaaat 25332012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 23860377 - 23860430
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtccttta 219  Q
    ||||||||||||||| ||| |||| |||||||||||||| ||| ||||||||||    
T  23860377 aaaattacatttttaatctattaatttaatttcaggtaacagtttggtccttta 23860430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 277
Target Start/End: Complemental strand, 24270651 - 24270562
Alignment:
Q  188 aacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatgaatttttaagctt 277  Q
    ||||||||||||||||| ||| | ||| ||||||||| |   |||| ||||| || ||||||||||||||||||||  ||||| ||||||    
T  24270651 aacttaatttcaggtaatagtttcgtcttttatcttttttcgatttcaattttgttctttttgtccattttcatatacattttcaagctt 24270562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 263
Target Start/End: Complemental strand, 32188199 - 32188128
Alignment:
Q  191 ttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatat 263  Q
    ||||||| | |||| ||| ||||||||||||||| | |||||||||||||||| ||||| |||||||| ||||    
T  32188199 ttaatttaatgtaatagtttggtcctttatcttttt-tcattttaatttggtcatttttatccatttttatat 32188128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 223
Target Start/End: Original strand, 44038150 - 44038211
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaa-tttcaggtaagagtgtggtcctttatctt 223  Q
    |||||||| ||||||||||||| ||||||||| ||||| |||| ||| ||||| ||||||||    
T  44038150 ggcaaaatcacatttttagtctcttaacttaattttcaagtaacagtttggtcttttatctt 44038211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 152; Significance: 2e-80; HSPs: 90)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 158 - 361
Target Start/End: Original strand, 32771986 - 32772189
Alignment:
Q  158 ttaaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattt 257  Q
    ||||||||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| |||||||||||||||||||||||    
T  32771986 ttaaaggcaaaattacacttttagtcctttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattt 32772085  T
Q  258 tcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattag 357  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||    
T  32772086 tcatatgaatttttaactttaaaattcatgattttattttcttatggtctttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattag 32772185  T
Q  358 attt 361  Q
    ||||    
T  32772186 attt 32772189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 160 - 361
Target Start/End: Original strand, 2467056 - 2467257
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttc 259  Q
    ||||||||||||||||||||||||  |||||||||||| |||||| ||| ||||||||||||||| | | |||| |||||||||||||||||| ||||||    
T  2467056 aaaggcaaaattacatttttagtcccttaacttaattttaggtaacagtttggtcctttatctttttttaatttcaatttggtcctttttgtcgattttc 2467155  T
Q  260 atatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagat 359  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2467156 atatgaaattttaagcttaaaattcatgattttattttcttatggtctttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagat 2467255  T
Q  360 tt 361  Q
    ||    
T  2467256 tt 2467257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 161 - 361
Target Start/End: Original strand, 12854572 - 12854773
Alignment:
Q  161 aaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatat-cattttaatttggtcctttttgtccattttc 259  Q
    |||||||||||||||||||||||  ||||||||||||||||||| ||| ||||| ||||||||| | | ||||| |||||||||||||||||||||||||    
T  12854572 aaggcaaaattacatttttagtcctttaacttaatttcaggtaacagtttggtcttttatcttttttttcatttcaatttggtcctttttgtccattttc 12854671  T
Q  260 atatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagat 359  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  12854672 atatgaaattttaagcttaaaattcatgattttattttcttatggtctttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagat 12854771  T
Q  360 tt 361  Q
    ||    
T  12854772 tt 12854773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 163 - 361
Target Start/End: Original strand, 7601593 - 7601791
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||| ||||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| |||||||||| |||||||||||||||||    
T  7601593 ggcaaaattatatttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcccttttgtccattttcata 7601692  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||| ||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7601693 tgaaattttaagcttaaaattcatgattttattttcttatcgtctttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 7601791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 163 - 361
Target Start/End: Complemental strand, 33429847 - 33429649
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  33429847 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcata 33429748  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||| |||||||||||||||||||||||||||||||||||||| || | ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  33429747 tgaatgtttaagcttaaaattcatgattttattttcttatggtctttcaatcttcaaatatatgatcctcgtctatgtttgcataagaatattagattt 33429649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 163 - 361
Target Start/End: Complemental strand, 42611095 - 42610897
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| |||||||   ||||||||||||||||||| ||| ||||||||||||||| | |||||| |||||| |||||| ||||||||||||||    
T  42611095 ggcaaaattacacttttagttctttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttgatcctttctgtccattttcata 42610996  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  42610995 tgaatttttaagcttaaaattcatgattttattttcttatggtccttcagtcttcaaatctataattctcgtctatgtttgcataagaatattagattt 42610897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 164 - 361
Target Start/End: Complemental strand, 40952381 - 40952184
Alignment:
Q  164 gcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatat 263  Q
    ||||||||||| ||||||||  | |||||||||||| | || ||| ||||||||||||||| | |||||| |||||||||||||||||||||||||||||    
T  40952381 gcaaaattacacttttagtccctaaacttaatttcaagcaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatat 40952282  T
Q  264 gaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  40952281 gaatttttaagcttaaaattcatgattttattttcttatggtctttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 40952184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 162 - 361
Target Start/End: Original strand, 1643538 - 1643737
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | ||||||  ||||||||||||||||||||||||||    
T  1643538 aggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcgatttggtcctttttgtccattttcat 1643637  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||| ||||| ||||    
T  1643638 atgaatttttaagcttaaaatttatgattttattttcttatggtctttcagtcttcaaatctatgatcctcttctatgtttgcataagattattaaattt 1643737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 159 - 361
Target Start/End: Complemental strand, 14872053 - 14871850
Alignment:
Q  159 taaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatat-cattttaatttggtcctttttgtccattt 257  Q
    |||||| ||||||||||||||| ||  ||||||||||||||||||| ||| ||||||||||||||| | | ||||| ||||||||| |||||||||||||    
T  14872053 taaaggtaaaattacatttttaatcccttaacttaatttcaggtaacagtttggtcctttatcttttttttcatttcaatttggtcatttttgtccattt 14871954  T
Q  258 tcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattag 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  || | |||||||||||||||||||||||||||||||||||||||||||||    
T  14871953 tcatatgaatttttaagcttaaaattcatgattttattttcttatggtttttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattag 14871854  T
Q  358 attt 361  Q
    ||||    
T  14871853 attt 14871850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 163 - 361
Target Start/End: Complemental strand, 16737117 - 16736919
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  ||||||||||||||||||| | | ||||| ||||||||| | |||||| |||| |||| ||||||||||||||||||    
T  16737117 ggcaaaattacacttttagtcccttaacttaatttcaggtaataatttggtcatttatctttttttcatttcaattcggtcttttttgtccattttcata 16737018  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16737017 tgaatttttaagcttaaaattcatgattttattttcttatggtctttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 16736919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 156 - 361
Target Start/End: Original strand, 13697311 - 13697516
Alignment:
Q  156 aattaaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccat 255  Q
    ||||||||||||||||||| |||||||   |||||||| ||||| |||| ||| ||||| ||||||||| | |||||| |||||||||||||||||| ||    
T  13697311 aattaaaggcaaaattacacttttagttcattaacttattttcaagtaacagtttggtcttttatctttttttcatttcaatttggtcctttttgtcaat 13697410  T
Q  256 tttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatatt 355  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| || | |||||||||||||||||||||||||||||||||||||||||||    
T  13697411 tttcatatgaatttttaagcttaaaattcatgattttatttttttatggtctttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatatt 13697510  T
Q  356 agattt 361  Q
    ||||||    
T  13697511 agattt 13697516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 163 - 361
Target Start/End: Complemental strand, 13455988 - 13455792
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||||||||||||  |||||||||||| |||||| ||| || |||||||| ||| |   |||| ||||||||||||||| ||||||||||||    
T  13455988 ggcaaaattacatttttagtcccttaacttaattttaggtaacagtttgatcctttatttttttt--atttcaatttggtcctttttatccattttcata 13455891  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  13455890 tgaatttttaagcttaaaattcatgattttattttcttatggtccttcagtcttcaaatctatgatcctcgtctatgtttgcattagaatattagattt 13455792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 162 - 361
Target Start/End: Original strand, 19130869 - 19131068
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||| ||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| |||||||||||||||||||||||||||    
T  19130869 aggcaaagttacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcat 19130968  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||||||| | |||||||||||||||||||||||||| || ||| |||||||||||||||||||| |||||||| |||||||||||||||||    
T  19130969 atgaatttttaagctttatattcatgattttattttcttatggtctttcagttttcaaatctatgatcctcgtttatgtttggataagaatattagattt 19131068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 163 - 361
Target Start/End: Original strand, 3974213 - 3974411
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||||||||||| | ||||||||||||||| ||| | | ||||||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  3974213 ggcaaaattacatttttagtttcttaacttaatttcagataacaatttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcata 3974312  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    || |||||||| |||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||| |||| |||||||    
T  3974313 tgcatttttaaacttaaaattcatgattttattttcttatggtctttcaatcttcaaatctatgatcctcgtctatgtttgcataaaaatagtagattt 3974411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 166 - 361
Target Start/End: Complemental strand, 2426541 - 2426345
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatat-cattttaatttggtcctttttgtccattttcatatg 264  Q
    ||||||||| ||||||||  ||||||||||||||| ||| ||| ||||| ||||||||| | | ||||| ||||||||||||||||||||||||||||||    
T  2426541 aaaattacacttttagtcccttaacttaatttcagataacagtttggtcttttatcttttttttcatttcaatttggtcctttttgtccattttcatatg 2426442  T
Q  265 aatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||| ||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2426441 aatttttaagtttaaaattcatgattttattttcttatggtctttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 2426345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 162 - 361
Target Start/End: Original strand, 1098891 - 1099090
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| ||||||||  |||| |||||||||||||| ||| | ||||||||| ||| | |||||| ||||||||| |||||||||||||||||    
T  1098891 aggcaaaattacacttttagtcccttaatttaatttcaggtaacagtttagtcctttatttttttttcatttcaatttggtcatttttgtccattttcat 1098990  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||| |||||||||||||||||||||||||||||||||||||||| || | ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  1098991 atgattttttaagcttaaaattcatgattttattttcttatggtctttcaatcttcaaatttatgatcctcgtctatgtttgcataagaatattagattt 1099090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 166 - 361
Target Start/End: Original strand, 3279189 - 3279386
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttata--tcattttaatttggtcctttttgtccattttcatat 263  Q
    ||||||||| ||||||||  | ||||||||||||||||| ||| ||||||||||||||| |   |||||| |||||| ||||||||||||||||||||||    
T  3279189 aaaattacacttttagtccctcaacttaatttcaggtaacagtttggtcctttatcttttttattcatttcaatttgatcctttttgtccattttcatat 3279288  T
Q  264 gaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||| ||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  3279289 gaatttttaagtttaaaattcatgattttattttcttatggtctttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 3279386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 160 - 361
Target Start/End: Original strand, 13577262 - 13577461
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttc 259  Q
    ||||| ||||||||||||||||||  |||| |||||||||| ||| ||| ||||| ||||||||  | ||||||||||||||||||||||||||||||||    
T  13577262 aaaggaaaaattacatttttagtcccttaatttaatttcagataacagtttggtcttttatcttattttcattttaatttggtcctttttgtccattttc 13577361  T
Q  260 atatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagat 359  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||| || | ||||||||||||||||| |||||||||||||||||||||||||||||    
T  13577362 atatgaatttttaagcttaaaattcatgattt--ttttcttatggtctttcaatcttcaaatctatgatcttcgtctatgtttgcataagaatattagat 13577459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 163 - 360
Target Start/End: Complemental strand, 30129789 - 30129591
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatc--tttatatcattttaatttggtcctttttgtccattttca 260  Q
    |||||||||||| ||||||||  ||||||||||||| ||||| ||| ||||||||||||  ||| | |||||| ||||||||| |||||||| |||||||    
T  30129789 ggcaaaattacacttttagtcccttaacttaatttcgggtaacagtttggtcctttatcgttttttttcatttcaatttggtcatttttgtctattttca 30129690  T
Q  261 tatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagatt 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  30129689 tatgaatttttaagcttaaaattcatgattttattttcttatggtccttgagtcttcaaatctatgatccttgtctatgtttgcataa-aatattagatt 30129591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 166 - 361
Target Start/End: Original strand, 7610266 - 7610461
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| ||||| |||||||||||||||||| ||||||    
T  7610266 aaaattacacttttagtcccttaacttaatttcaggtaatagtttggtcctttatctttttttcatttcaatttagtcctttttgtccatttttatatga 7610365  T
Q  266 atttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||| |||||||||||||||||||||||||||||||  |  || |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7610366 attttcaagcttaaaattcatgattttattttcttatactatttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatataagattt 7610461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 163 - 361
Target Start/End: Original strand, 2960894 - 2961092
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||| ||  |||| ||||||| |||||||||| | ||||||||||||| | |||||| |||||||||||||||||||||||| |||    
T  2960894 ggcaaaattacacttttaatcctttaatttaattttaggtaagagtttagtcctttatctttttttcatttcaatttggtcctttttgtccatttttata 2960993  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    | |||||||||||||||||||||||||||||||||||||||||| ||   ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2960994 ttaatttttaagcttaaaattcatgattttattttcttatggtctttcgatcttcaaatctatgatcatcgtctatgtttgcataagaatattagattt 2961092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 163 - 361
Target Start/End: Original strand, 2969362 - 2969560
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||| ||  |||| ||||||| |||||||||| | ||||||||||||| | |||||| |||||||||||||||||||||||| |||    
T  2969362 ggcaaaattacacttttaatcctttaatttaattttaggtaagagtttagtcctttatctttttttcatttcaatttggtcctttttgtccatttttata 2969461  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    | |||||||||||||||||||||||||||||||||||||||||| ||   ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2969462 ttaatttttaagcttaaaattcatgattttattttcttatggtctttcgatcttcaaatctatgatcatcgtctatgtttgcataagaatattagattt 2969560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 162 - 361
Target Start/End: Original strand, 6539992 - 6540183
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| ||||||||  ||||||||||||||| ||| ||| ||||||||||||||| | |||||| |||||||||       |||||||||||    
T  6539992 aggcaaaattacacttttagtcccttaacttaatttcag-taacagtttggtcctttatctttttttcatttcaatttggtc-------tccattttcat 6540083  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  6540084 atgaatttttaagcttaaaattcatgattttattttcttatggtccttaagtcttcaaatctatgatcctcgtctatgtttggataagaatattagattt 6540183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 162 - 361
Target Start/End: Complemental strand, 24858718 - 24858519
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgt-ccattttca 260  Q
    ||||||||||||| ||||| ||  |||||||||| |||||||| ||| || |||||||||||| | |||||| ||||||||| ||||| | |||||||||    
T  24858718 aggcaaaattacacttttaatcccttaacttaatgtcaggtaacagtttgatcctttatcttttt-tcatttcaatttggtcattttttttccattttca 24858620  T
Q  261 tatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagatt 360  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  24858619 tatgaatttttaagcttaaaattcatgattttattttcttatggtctttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatataagatt 24858520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 186 - 361
Target Start/End: Complemental strand, 33381719 - 33381545
Alignment:
Q  186 ttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaattca 285  Q
    ||||||||||||||||||| ||| ||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  33381719 ttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatgaatttt-atgcttaaaattca 33381621  T
Q  286 tgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||| ||| || | ||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  33381620 tgattttattttcttatagtctttcaatcttcaaatttatgatcctcgtctatttttgcataagaatattagattt 33381545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 160 - 361
Target Start/End: Complemental strand, 37943846 - 37943641
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatat----cattttaatttggtcctttttgtccat 255  Q
    ||||||||||||||| ||||||||  ||||||||||||||| ||| | | ||||| ||||||||| | |    ||||| ||||||||| |||||||||||    
T  37943846 aaaggcaaaattacacttttagtcccttaacttaatttcagataataatttggtcatttatctttttttttttcatttcaatttggtcatttttgtccat 37943747  T
Q  256 tttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatatt 355  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||| || | |||||||||||||||||||||||||||||||||||| ||||||    
T  37943746 tttcatatgaatttttaagtttaaaattcatgattttattttcttatagtctttcaatcttcaaatctatgatcctcgtctatgtttgcataaaaatatt 37943647  T
Q  356 agattt 361  Q
    ||||||    
T  37943646 agattt 37943641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 161 - 327
Target Start/End: Original strand, 31485955 - 31486121
Alignment:
Q  161 aaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttca 260  Q
    |||||||||||||| ||||||||| ||||||||||||||||||| ||| ||||||||||||||| | |||||| ||||||||| |||||||||| |||||    
T  31485955 aaggcaaaattacacttttagtctcttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcttttttgtccaatttca 31486054  T
Q  261 tatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatga 327  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| || | |||||||||||||||    
T  31486055 tatgaatttttaagcttaaaattcatgattttattttcttatcgtctttcaatcttcaaatctatga 31486121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 163 - 361
Target Start/End: Complemental strand, 19984576 - 19984376
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatc--attttaatttggtcctttttgtccattttca 260  Q
    |||||||||||||||||||||  |||||||||||| ||||||  || | ||| ||||||||| | |   |||| |||||| |||||||||||||||||||    
T  19984576 ggcaaaattacatttttagtcccttaacttaattttaggtaacggtttagtcatttatcttttttttttatttcaatttgatcctttttgtccattttca 19984477  T
Q  261 tatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagatt 360  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||  || ||||||||| |||||||||||||||||    
T  19984476 tatgaatttttaagcttaaaattcatgattttattttcttacggtctttcagtcttcaaatctatgatattcttctatgttttcataagaatattagatt 19984377  T
Q  361 t 361  Q
    |    
T  19984376 t 19984376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 167 - 355
Target Start/End: Original strand, 37092183 - 37092371
Alignment:
Q  167 aaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatgaa 266  Q
    |||||||| |||||| |  ||||||| |||| |||||| ||| | ||| ||||||||| | |||||| ||||| ||||||||  ||||||| ||||||||    
T  37092183 aaattacacttttagccccttaactttattttaggtaacagtttagtcatttatctttttttcatttcaattttgtccttttgatccatttacatatgaa 37092282  T
Q  267 tttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatatt 355  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||    
T  37092283 tttttaagcttaaaattcatgattttattttcttatggtctttcagtcttcaaatctatgatccttgtctatgtttgcataagaatatt 37092371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 166 - 361
Target Start/End: Original strand, 31618171 - 31618365
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    |||| |||||||||||||  ||||||||| || |||||| ||| ||||||||||||||| | |||||||||||||||| | ||||| |||||||||||      
T  31618171 aaaaatacatttttagtcatttaacttaaatttaggtaacagtttggtcctttatcttttt-tcattttaatttggtcatctttgttcattttcatatac 31618269  T
Q  266 atttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||| ||||||||| |||||||||||||||||||||| || ||||| ||||||||| ||| |||||||||||||||||||||||||||||||    
T  31618270 atttttaaacttaaaatttatgattttattttcttatggtctttcagtctacaaatctataatcttcgtctatgtttgcataagaatattagattt 31618365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 166 - 361
Target Start/End: Original strand, 22621060 - 22621245
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||||| |||||||   |||||||||||| |||||| ||| |||||||| |||||| | |||||||||||||||||         ||||||||||||    
T  22621060 aaaattacacttttagttccttaacttaattttaggtaacagtttggtcctt-atctttttttcattttaatttggtcc---------attttcatatga 22621149  T
Q  266 atttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||| ||||||||||||    
T  22621150 atttttaagcttaaaattcatgattttattttcttatggtccttgagtcttcaaatttatgatcctcatctatgtttgcataataatattagattt 22621245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 157 - 355
Target Start/End: Complemental strand, 8357386 - 8357187
Alignment:
Q  157 attaaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatat-cattttaatttggtcctttttgtccat 255  Q
    |||| ||| ||||||| ||||||||||  |||| || |||| || ||||||| | ||||||||||||| | | ||||| ||||| ||| ||||  |||||    
T  8357386 attataggtaaaattatatttttagtcctttaattttattttagataagagtttagtcctttatcttttttttcatttcaattttgtcattttgatccat 8357287  T
Q  256 tttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatatt 355  Q
    || |||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||| |||||||||||||||||||||||    
T  8357286 ttacatatgaatttttaagcttaaaattcatgattttattttcttattgtctttcagtcttcaaatctatgatccttgtctatgtttgcataagaatatt 8357187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 215 - 355
Target Start/End: Complemental strand, 5239540 - 5239400
Alignment:
Q  215 ctttatctttatatcattttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtc 314  Q
    |||||||||| | |||||| ||||| |||||||| |||||| | ||||||||||||||| |||||||||||||||||||||||||||||||  || ||||    
T  5239540 ctttatctttttttcatttcaattttgtccttttggtccatctacatatgaatttttaaacttaaaattcatgattttattttcttatggtatttcagtc 5239441  T
Q  315 ttcaaatctatgatcctcgtctatgtttgcataagaatatt 355  Q
    ||||||| ||||||| | |||||||||||||||||||||||    
T  5239440 ttcaaatttatgatctttgtctatgtttgcataagaatatt 5239400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 253 - 361
Target Start/End: Complemental strand, 18707494 - 18707386
Alignment:
Q  253 cattttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaat 352  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||||||  || | ||||||||| ||||||||||||||||||||||||||||||    
T  18707494 catttttatatgaatttttaagtttaaaattcatgattttattttcttatggtttttcaatcttcaaatttatgatcctcgtctatgtttgcataagaat 18707395  T
Q  353 attagattt 361  Q
    |||||||||    
T  18707394 attagattt 18707386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 163 - 264
Target Start/End: Original strand, 39589615 - 39589716
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  39589615 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcata 39589714  T
Q  263 tg 264  Q
    ||    
T  39589715 tg 39589716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 163 - 282
Target Start/End: Complemental strand, 19131184 - 19131065
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| ||||| ||||||||||||||||||||||    
T  19131184 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttagtcctttttgtccattttcata 19131085  T
Q  263 tgaatttttaagcttaaaat 282  Q
    |  ||||| |||||| ||||    
T  19131084 tacattttcaagcttcaaat 19131065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 158 - 263
Target Start/End: Complemental strand, 6541528 - 6541423
Alignment:
Q  158 ttaaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattt 257  Q
    ||||||||||||||||| ||||||||  |||||||||||| |||||| ||| || |||||||||||| | ||||||||||||||||||||||||||| ||    
T  6541528 ttaaaggcaaaattacacttttagtcctttaacttaattttaggtaacagtttgatcctttatctttttttcattttaatttggtcctttttgtccactt 6541429  T
Q  258 tcatat 263  Q
    ||||||    
T  6541428 tcatat 6541423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 33381428 - 33381548
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||| ||||||||||||||  ||||||||||||||||||| ||| ||||| ||||||||| | |||||| |||||||||||||||||||||||| ||    
T  33381428 aggcaaagttacatttttagtcccttaacttaatttcaggtaacagtttggtcttttatctttttttcatttcaatttggtcctttttgtccatttttat 33381527  T
Q  262 atgaatttttaagcttaaaat 282  Q
    ||  ||||| |||||| ||||    
T  33381528 atacattttcaagcttcaaat 33381548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 163 - 274
Target Start/End: Original strand, 2426229 - 2426340
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  ||||||||||||||||||| ||| | ||||||||||||| | |||||| |||||||||||||||||||||||| |||    
T  2426229 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttagtcctttatctttttttcatttcaatttggtcctttttgtccatttttata 2426328  T
Q  263 tgaatttttaag 274  Q
    |  |||||||||    
T  2426329 tacatttttaag 2426340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 163 - 282
Target Start/End: Complemental strand, 7601907 - 7601788
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  ||||||||||||||||||| ||| ||||| ||||||||| | | |||| ||||||||||||||||||||||||||||    
T  7601907 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcatttatctttttttaatttcaatttggtcctttttgtccattttcata 7601808  T
Q  263 tgaatttttaagcttaaaat 282  Q
    |  ||||| |||||| ||||    
T  7601807 tacattttcaagcttcaaat 7601788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 163 - 282
Target Start/End: Original strand, 24858403 - 24858522
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||||||||||||  |||||||||||| |||||| ||| ||||||||||||||| | |||||| ||||||||| |||||||||||||||| |    
T  24858403 ggcaaaattacatttttagtcccttaacttaattttaggtaacagtttggtcctttatctttttttcatttcaatttggtcttttttgtccattttcaaa 24858502  T
Q  263 tgaatttttaagcttaaaat 282  Q
    |  ||||| |||||| ||||    
T  24858503 tatattttcaagcttcaaat 24858522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 162 - 361
Target Start/End: Original strand, 12875663 - 12875865
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctt---tatatcattttaatttggtcctttttgtccatttt 258  Q
    |||||||||||||| |||||||  |||||||||||| |||||| ||| || |||||||| ||   | | |||||| |||||||| ||||| |||||||||    
T  12875663 aggcaaaattacatgtttagtcccttaacttaattttaggtaacagtttg-tcctttattttatttttttcatttcaatttggttcttttggtccatttt 12875761  T
Q  259 catatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctat-gatcctcgtctatgtttgcataagaatattag 357  Q
     ||||| ||||| |||||| ||||| ||| ||||||||||| |||| | || | ||||||||||||| | |  |  ||||||||||||||||||||||||    
T  12875762 tatatggattttcaagcttcaaatttatggttttattttctgatggcctttcaatcttcaaatctatggttttttatctatgtttgcataagaatattag 12875861  T
Q  358 attt 361  Q
    ||||    
T  12875862 attt 12875865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 165 - 282
Target Start/End: Original strand, 19984262 - 19984379
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatg 264  Q
    ||||||||||| |||||||| |||| ||||||||||| || | | ||||||||||||||| | |||||||||||||||| |||||||||||||||||||     
T  19984262 caaaattacatatttagtctcttaatttaatttcaggcaataatttggtcctttatctttttttcattttaatttggtcatttttgtccattttcatata 19984361  T
Q  265 aatttttaagcttaaaat 282  Q
     ||||| |||||| ||||    
T  19984362 cattttcaagcttcaaat 19984379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 160 - 304
Target Start/End: Original strand, 34159171 - 34159318
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatct---ttatatcattttaatttggtcctttttgtccatt 256  Q
    ||||||||||||| | ||||| ||| |||||||||||||||| || | | ||||| |||||||   || | |||||| ||||| ||||||||| || |||    
T  34159171 aaaggcaaaattataattttaatcttttaacttaatttcaggcaataatttggtcttttatctcttttttttcatttcaattttgtcctttttatctatt 34159270  T
Q  257 ttcatatgaatttttaagcttaaaattcatgattttattttcttatgg 304  Q
    | ||||||||||||||||||| |||||||||| |||||||||||||||    
T  34159271 tgcatatgaatttttaagcttcaaattcatgactttattttcttatgg 34159318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 40952066 - 40952187
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatc-tttatatcattttaatttggtcctttttgtccattttca 260  Q
    ||||||||||||| ||||||||  ||||||||||||||||||| ||| |||||||||||| ||| | |||||| |||||||||||||||||||||||| |    
T  40952066 aggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatcttttttttcatttcaatttggtcctttttgtccattttta 40952165  T
Q  261 tatgaatttttaagcttaaaat 282  Q
    |||  ||||| |||||| ||||    
T  40952166 tatacattttcaagcttcaaat 40952187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 162 - 282
Target Start/End: Complemental strand, 1099207 - 1099087
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||||||||| |   ||||||||||||||||||| | | ||||||||||||||| | |||||| |||||||||||||||||||||||| ||    
T  1099207 aggcaaaattacatttttattaccttaacttaatttcaggtaacaatttggtcctttatctttttttcatttcaatttggtcctttttgtccatttttat 1099108  T
Q  262 atgaatttttaagcttaaaat 282  Q
    ||  ||||| |||||| ||||    
T  1099107 atacattttcaagcttcaaat 1099087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 163 - 283
Target Start/End: Complemental strand, 14729760 - 14729640
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||| ||||||||||  |||||||||||| | |||| ||| ||||||||||||||| | |||||| ||||||||| ||||||||||||||||||    
T  14729760 ggcaaaattaaatttttagtcccttaacttaattttaagtaacagtttggtcctttatctttttttcatttcaatttggtcttttttgtccattttcata 14729661  T
Q  263 tgaatttttaagcttaaaatt 283  Q
    |  ||||| |||||| |||||    
T  14729660 tacattttcaagcttcaaatt 14729640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 293 - 361
Target Start/End: Original strand, 39589706 - 39589774
Alignment:
Q  293 attttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39589706 attttcatatggtccttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 39589774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 161 - 283
Target Start/End: Complemental strand, 37092496 - 37092373
Alignment:
Q  161 aaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatat-cattttaatttggtcctttttgtccattttc 259  Q
    |||| ||||||||| |||||| || |||| |||||||||||||| ||| ||||||||||||||| | | ||||| |||||||||||||||||||||||||    
T  37092496 aaggtaaaattacacttttagactcttaagttaatttcaggtaacagtttggtcctttatcttttttttcatttcaatttggtcctttttgtccattttc 37092397  T
Q  260 atatgaatttttaagcttaaaatt 283  Q
    ||||  ||||| |||||| |||||    
T  37092396 atatacattttcaagcttcaaatt 37092373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 279 - 361
Target Start/End: Complemental strand, 3168291 - 3168209
Alignment:
Q  279 aaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||||||||||||||||||| || | ||||||| | |||||||||||||||||||||||||||||||||| ||||    
T  3168291 aaattcatgattttattttcttatggtctttcaatcttcaattatatgatcctcgtctatgtttgcataagaatattatattt 3168209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 161 - 282
Target Start/End: Complemental strand, 3279504 - 3279383
Alignment:
Q  161 aaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttca 260  Q
    |||||||||||||| ||||||||  |||||||||||| | |||| ||| ||||| ||||||||| | |||||| |||||||||||||||||||||||| |    
T  3279504 aaggcaaaattacacttttagtcccttaacttaattttaagtaacagtttggtcatttatctttttttcatttcaatttggtcctttttgtccattttta 3279405  T
Q  261 tatgaatttttaagcttaaaat 282  Q
    |||  ||||| |||||| ||||    
T  3279404 tatacattttcaagcttcaaat 3279383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 165 - 282
Target Start/End: Complemental strand, 7610574 - 7610458
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatg 264  Q
    |||||||||| ||||||||| ||||||||||||||||||| ||| ||||||||||| ||| | |||||| ||||||||| |||||||||||||||| ||     
T  7610574 caaaattacacttttagtctcttaacttaatttcaggtaacagtttggtcctttat-tttttttcatttcaatttggtcttttttgtccattttcaaata 7610476  T
Q  265 aatttttaagcttaaaat 282  Q
     ||||| |||||| ||||    
T  7610475 cattttcaagcttcaaat 7610458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 154 - 282
Target Start/End: Complemental strand, 12854899 - 12854770
Alignment:
Q  154 ttaattaaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatc-tttatatcattttaatttggtcctttttgtc 252  Q
    ||||| ||||||||||||| | |||||||   ||||||||||||||||||| ||| |||||||||||| ||| | |||||| ||||||||||||||| ||    
T  12854899 ttaataaaaggcaaaattagacttttagttccttaacttaatttcaggtaacagtttggtcctttatcttttttttcatttcaatttggtcctttttatc 12854800  T
Q  253 cattttcatatgaatttttaagcttaaaat 282  Q
    |||||||||||  ||||| |||||| ||||    
T  12854799 cattttcatatacattttcaagctttaaat 12854770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 281 - 361
Target Start/End: Original strand, 2492782 - 2492861
Alignment:
Q  281 attcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||||||||||||||||| || | |||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  2492782 attcatgattttattttcttatggtctttcaatcttcaaatctatgat-ctcgtctatgtttacataagaatattagattt 2492861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 150 - 282
Target Start/End: Original strand, 14871721 - 14871853
Alignment:
Q  150 ttgtttaattaaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtccttttt 249  Q
    |||||| ||||  |||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| |||||||| ||||||    
T  14871721 ttgttttattattggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggttcttttt 14871820  T
Q  250 gtccattttcatatgaatttttaagcttaaaat 282  Q
     |||| ||| ||||  ||||| |||||| ||||    
T  14871821 atccagttttatatacattttcaagcttcaaat 14871853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 161 - 282
Target Start/End: Original strand, 16736799 - 16736922
Alignment:
Q  161 aaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattt--taatttggtcctttttgtccatttt 258  Q
    |||||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | ||||||   |||||||||||||||||| |||||    
T  16736799 aaggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaaaatttggtcctttttgtctatttt 16736898  T
Q  259 catatgaatttttaagcttaaaat 282  Q
     ||||  ||||| |||||| ||||    
T  16736899 tatatacattttcaagcttcaaat 16736922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 33429536 - 33429652
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||||| ||||| ||  ||||||||||||||||||| | | ||||||||||||||| | |||||| |||||||||||||||||||||||| ||||      
T  33429536 aaaattacacttttaatcctttaacttaatttcaggtaacaatttggtcctttatctttttttcatttcaatttggtcctttttgtccatttttatatac 33429635  T
Q  266 atttttaagcttaaaat 282  Q
    ||||| |||||| ||||    
T  33429636 attttcaagcttcaaat 33429652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 163 - 282
Target Start/End: Complemental strand, 22621361 - 22621242
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  |||||||||||| |||||| ||| | || |||||||||| | |||||| |||||| |||||||||||||||||||||    
T  22621361 ggcaaaattacacttttagtcccttaacttaattttaggtaatagtttagttctttatctttttttcatttcaatttgatcctttttgtccattttcata 22621262  T
Q  263 tgaatttttaagcttaaaat 282  Q
    |  ||||| |||||| ||||    
T  22621261 tacattttcaagcttcaaat 22621242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 157 - 282
Target Start/End: Complemental strand, 12875988 - 12875862
Alignment:
Q  157 attaaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatc-tttatatcattttaatttggtcctttttgtccat 255  Q
    |||||||||||||||| ||||||||||| |||||||||||| |||||| ||| ||||| |||||| ||| | |||||| ||||| || ||||| ||||||    
T  12875988 attaaaggcaaaattatatttttagtcttttaacttaattttaggtaacagtttggtcatttatcttttttttcatttcaattttgttcttttggtccat 12875889  T
Q  256 tttcatatgaatttttaagcttaaaat 282  Q
    ||| ||||| ||||| |||||| ||||    
T  12875888 ttttatatggattttcaagctttaaat 12875862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 166 - 283
Target Start/End: Complemental strand, 1643850 - 1643733
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||||| ||||||||  |||||||||||| | |||| ||| ||||| || |||||| | |||||| |||||||||||||||||||||||||||||      
T  1643850 aaaattacacttttagtcccttaacttaattttaagtaacagtttggtctttcatctttttttcatttcaatttggtcctttttgtccattttcatatac 1643751  T
Q  266 atttttaagcttaaaatt 283  Q
    ||||| |||||| |||||    
T  1643750 attttcaagcttcaaatt 1643733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 165 - 262
Target Start/End: Complemental strand, 2467371 - 2467274
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    ||||||||||||||||||   ||||||||||||||||||| | | || |||| ||||||| | |||||| ||||||||||||||||||||||||||||    
T  2467371 caaaattacatttttagttccttaacttaatttcaggtaacaatatgatcctctatctttttttcatttcaatttggtcctttttgtccattttcata 2467274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 157 - 282
Target Start/End: Complemental strand, 31618486 - 31618362
Alignment:
Q  157 attaaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccatt 256  Q
    |||||||| ||||||||||||||| ||  ||||||||| ||||| ||| ||| ||||| ||||||||| | ||||||||||||||||| ||||||| |||    
T  31618486 attaaaggtaaaattacatttttaatcccttaacttaaattcagataacagtttggtcttttatcttt-tttcattttaatttggtcccttttgtcaatt 31618388  T
Q  257 ttcatatgaatttttaagcttaaaat 282  Q
    |||||||  ||||| |||||| ||||    
T  31618387 ttcatatacattttcaagcttcaaat 31618362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 162 - 282
Target Start/End: Complemental strand, 32772307 - 32772186
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtccttta-tctttatatcattttaatttggtcctttttgtccattttca 260  Q
    ||||||||||||| |||| |||  ||||||||||||||||||| ||| |||||||||| | ||| | |||||| |||||||||||||||||||||||| |    
T  32772307 aggcaaaattacactttttgtcctttaacttaatttcaggtaacagtttggtcctttattttttttttcatttcaatttggtcctttttgtccattttta 32772208  T
Q  261 tatgaatttttaagcttaaaat 282  Q
    |||  ||||| |||||| ||||    
T  32772207 tatacattttcaagcttcaaat 32772186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 186 - 282
Target Start/End: Complemental strand, 13577554 - 13577458
Alignment:
Q  186 ttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaat 282  Q
    ||||||||||||||||||| ||| || |||||||| ||||| |||||| |||||||||||||||||||||||| ||||  ||||| |||||| ||||    
T  13577554 ttaacttaatttcaggtaacagtttgatcctttatttttatttcatttcaatttggtcctttttgtccatttttatatacattttcaagcttcaaat 13577458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 163 - 282
Target Start/End: Complemental strand, 39589891 - 39589771
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatc-tttatatcattttaatttggtcctttttgtccattttcat 261  Q
    |||||||||| | ||||||||  |||| |||||||||||||| ||| |||||||||||| ||| | |||||| |||||| ||||||||||||||||||||    
T  39589891 ggcaaaattatacttttagtcctttaatttaatttcaggtaacagtttggtcctttatcttttttttcatttcaatttgatcctttttgtccattttcat 39589792  T
Q  262 atgaatttttaagcttaaaat 282  Q
    ||  ||||| |||||| ||||    
T  39589791 atacattttcaagcttcaaat 39589771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 166 - 277
Target Start/End: Original strand, 30129478 - 30129588
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||||| ||||||||  ||||||||||||||||||| | | ||||| ||||||||| | | ||||||||||| ||||||||||||||||||||||      
T  30129478 aaaattacacttttagtcctttaacttaatttcaggtaacaatttggtcttttatcttttttt-attttaatttgatcctttttgtccattttcatatac 30129576  T
Q  266 atttttaagctt 277  Q
    ||||| ||||||    
T  30129577 attttcaagctt 30129588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 176 - 263
Target Start/End: Original strand, 37943539 - 37943625
Alignment:
Q  176 ttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatat 263  Q
    ||||||||| ||||||||||||||||||| ||| | ||||||||||||| | |||||| |||||||||||||||||||||||| ||||    
T  37943539 ttttagtctcttaacttaatttcaggtaatagtttagtcctttatcttt-tttcatttcaatttggtcctttttgtccatttttatat 37943625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 165 - 263
Target Start/End: Original strand, 8357068 - 8357165
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatat 263  Q
    |||||||| ||||||||||  ||||||||||||||||||| ||| |||| |||||| ||| | |||||| |||| ||||||||||||||||||||||||    
T  8357068 caaaattatatttttagtcccttaacttaatttcaggtaatagtttggttctttat-tttttttcatttcaattgggtcctttttgtccattttcatat 8357165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 163 - 281
Target Start/End: Original strand, 40881462 - 40881580
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||| ||||||| ||||||||  || |||||||||||| ||| ||| || || ||||||||| | |||||| ||||||||| ||||||||||||||||||    
T  40881462 ggcataattacaattttagtcccttgacttaatttcagataacagtttgatcttttatctttttttcatttcaatttggtcatttttgtccattttcata 40881561  T
Q  263 tgaatttttaagcttaaaa 281  Q
    |  ||||| ||||||||||    
T  40881562 tacattttcaagcttaaaa 40881580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 283
Target Start/End: Original strand, 5239281 - 5239398
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||||||||||||||  ||||||||||| ||| ||| | | ||||||||||||||| | |||||| | ||||||  |||||||||||||||||||      
T  5239281 aaaattacatttttagtcctttaacttaattacagataacaatttggtcctttatctttttttcatttcattttggttttttttgtccattttcatatac 5239380  T
Q  266 atttttaagcttaaaatt 283  Q
    ||||| |||||| |||||    
T  5239381 attttcaagcttcaaatt 5239398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 14729578 - 14729638
Alignment:
Q  295 tttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatatt 355  Q
    |||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||    
T  14729578 tttcttatggtcttttagtctttaaatctatgatccttgtctatgtttgcataagaatatt 14729638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 230 - 304
Target Start/End: Complemental strand, 35160675 - 35160601
Alignment:
Q  230 attttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttatgg 304  Q
    |||||||||| | |||||| ||| |||| |||||||||||| |||||| ||||||||||||||||||||||||||    
T  35160675 attttaattttgaccttttggtcaatttgcatatgaattttcaagcttcaaattcatgattttattttcttatgg 35160601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 282
Target Start/End: Original strand, 42610780 - 42610900
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatat-cattttaatttggtcctttttgtccattttcat 261  Q
    |||||||||| | ||||||||  |||| |||||||||||||| ||| ||||| ||||| ||| | | ||||| |||||| ||||||||||||||||||||    
T  42610780 ggcaaaattatacttttagtcctttaatttaatttcaggtaacagtttggtcatttattttttttttcatttcaatttgatcctttttgtccattttcat 42610879  T
Q  262 atgaatttttaagcttaaaat 282  Q
    ||  ||||| |||||| ||||    
T  42610880 atacattttcaagcttcaaat 42610900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 282
Target Start/End: Original strand, 18707257 - 18707389
Alignment:
Q  157 attaaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttat-------ctttatatcattttaatttggtccttttt 249  Q
    |||| ||||||||||||| ||||| ||  ||||||||||||||||||| ||| ||||| |||||       |||| | |||||| |||||||||||||||    
T  18707257 attataggcaaaattacacttttaatcctttaacttaatttcaggtaacagtttggtcttttatcttttacctttttttcatttcaatttggtccttttt 18707356  T
Q  250 gtccattttcatatgaatttttaagcttaaaat 282  Q
    ||||||||| ||||  ||||| |||||| ||||    
T  18707357 gtccatttttatatacattttcaagcttcaaat 18707389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 18717881 - 18717809
Alignment:
Q  186 ttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccatttt 258  Q
    ||||||||||||| ||||| ||| |||| |||||||||| | |||||||||||||| ||||||||| ||||||    
T  18717881 ttaacttaatttctggtaacagtttggttctttatctttttttcattttaatttggacctttttgttcatttt 18717809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 282
Target Start/End: Original strand, 3168094 - 3168212
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| |||||||   |||||||||||||| |||| ||| ||||| ||||||||| | |||||| ||||| ||| |||||||||||||  |||    
T  3168094 ggcaaaattacacttttagttccttaacttaatttcaagtaacagtttggtcatttatcttt-tttcatttcaatttagtcatttttgtccatttatata 3168192  T
Q  263 tgaatttttaagcttaaaat 282  Q
    |  ||||| |||||| ||||    
T  3168193 tatattttcaagcttcaaat 3168212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 168 - 282
Target Start/End: Complemental strand, 13697627 - 13697513
Alignment:
Q  168 aattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatgaat 267  Q
    ||||||| ||||| ||  ||||||||||||||| ||| ||  ||||| ||||||||| | | |||||||||||||| ||||  |||||||| |||| |||    
T  13697627 aattacacttttaatcccttaacttaatttcagataacagattggtcatttatctttttttaattttaatttggtcattttcatccatttttatataaat 13697528  T
Q  268 ttttaagcttaaaat 282  Q
    ||| |||||| ||||    
T  13697527 tttcaagcttcaaat 13697513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 186 - 282
Target Start/End: Original strand, 13455699 - 13455795
Alignment:
Q  186 ttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaat 282  Q
    |||||||||||| | |||| | | || | |||||||||| | |||||| |||||||||| ||||||||||||| ||||  |||||||||||| ||||    
T  13455699 ttaacttaattttaagtaacaatttgattctttatctttttttcatttcaatttggtccattttgtccatttttatatacatttttaagcttcaaat 13455795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 163 - 269
Target Start/End: Original strand, 17759796 - 17759907
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatat-----cattttaatttggtcctttttg-tccatt 256  Q
    |||||||||| | ||||||||  |||||||||||| |||||| ||| ||||||||||| |||||||      |||||||||| |||||||||| ||||||    
T  17759796 ggcaaaattataattttagtcatttaacttaattttaggtaacagtttggtcctttat-tttatatttttaaattttaattttgtcctttttgttccatt 17759894  T
Q  257 ttcatatgaattt 269  Q
    | |||||||||||    
T  17759895 tgcatatgaattt 17759907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 8874343 - 8874469
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatc------tttatatcattttaatttggtcctttttgtccat 255  Q
    ||||||||||||||||||||||| |||||||||||||| |||| | | | || |||||||      ||| | | |||| ||||| |||||||| ||||||    
T  8874343 aggcaaaattacatttttagtctcttaacttaatttcaagtaacaatttagttctttatctttttttttttttaatttcaattttgtccttttagtccat 8874442  T
Q  256 tttcatatgaatttttaagcttaaaat 282  Q
    ||||| ||| ||||| |||||| ||||    
T  8874443 tttcaaatgtattttcaagctttaaat 8874469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 217
Target Start/End: Complemental strand, 42645088 - 42645034
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctt 217  Q
    ||||||||||||| ||||||||| ||||||||||||||||||| ||| ||||||||    
T  42645088 aggcaaaattacacttttagtct-ttaacttaatttcaggtaacagtttggtcctt 42645034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 328
Target Start/End: Original strand, 261227 - 261309
Alignment:
Q  246 ttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgat 328  Q
    |||||||| ||| |||||| ||||||||| |||||||||||  |||||||||||||||  | |||| |||| |||| ||||||    
T  261227 ttttgtccgtttgcatatggatttttaagtttaaaattcatatttttattttcttatgaccttttaatctttaaatatatgat 261309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 282
Target Start/End: Complemental strand, 2961134 - 2961089
Alignment:
Q  237 tttggtcctttttgtccattttcatatgaatttttaagcttaaaat 282  Q
    |||||||||||||||||||||| |||| ||||||||||||| ||||    
T  2961134 tttggtcctttttgtccatttttatataaatttttaagcttcaaat 2961089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 282
Target Start/End: Complemental strand, 2969602 - 2969557
Alignment:
Q  237 tttggtcctttttgtccattttcatatgaatttttaagcttaaaat 282  Q
    |||||||||||||||||||||| |||| ||||||||||||| ||||    
T  2969602 tttggtcctttttgtccatttttatataaatttttaagcttcaaat 2969557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 253 - 354
Target Start/End: Original strand, 23226698 - 23226799
Alignment:
Q  253 cattttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaat 352  Q
    ||||| |||||||||||| ||  || ||||||||  |||||||||||||||  | || | |||| ||||||||| || || ||||||||| |||||||||    
T  23226698 catttacatatgaattttcaaatttcaaattcatagttttattttcttatgacctttcaatctttaaatctatggtcttcatctatgtttacataagaat 23226797  T
Q  353 at 354  Q
    ||    
T  23226798 at 23226799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 270
Target Start/End: Complemental strand, 17760068 - 17759969
Alignment:
Q  170 ttacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatgaattt 269  Q
    ||||| ||||| ||| |||||||||||| |||||| | | ||||  ||||||||| | | |||| ||||| ||| |||| ||||||||||||||||||||    
T  17760068 ttacacttttaatctcttaacttaattttaggtaacaatttggttatttatcttttt-taatttaaattttgtctttttagtccattttcatatgaattt 17759970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 238 - 297
Target Start/End: Original strand, 10626577 - 10626636
Alignment:
Q  238 ttggtcctttttgtccattttcatatgaatttttaagcttaaaattcatgattttatttt 297  Q
    ||||||||||| |||||||| ||||||||||| ||| ||| ||||  |||||||||||||    
T  10626577 ttggtccttttggtccatttgcatatgaatttgtaaccttcaaatctatgattttatttt 10626636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 270
Target Start/End: Original strand, 14729450 - 14729552
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatg 264  Q
    |||||||||| ||||||||  ||||||| |||| |||||| ||| | ||| |||||||||   |||||| ||||| ||| ||||  ||||||| ||||||    
T  14729450 caaaattacacttttagtcctttaactttattttaggtaacagtttagtcttttatcttt---tcatttcaattttgtcattttgatccatttacatatg 14729546  T
Q  265 aatttt 270  Q
    ||||||    
T  14729547 aatttt 14729552  T

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Target: chr5; HSP #89
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 204
Target Start/End: Complemental strand, 15858303 - 15858264
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaa 204  Q
    |||||||| |||||||||||||||||||||||| ||||||    
T  15858303 caaaattatatttttagtctgttaacttaattttaggtaa 15858264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 282
Target Start/End: Complemental strand, 2492912 - 2492858
Alignment:
Q  228 tcattttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaat 282  Q
    |||||||||||||||| |||||||||||||| ||||  ||||| |||||| ||||    
T  2492912 tcattttaatttggtcttttttgtccatttttatatacattttcaagcttcaaat 2492858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 150; Significance: 3e-79; HSPs: 70)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 164 - 361
Target Start/End: Original strand, 29596403 - 29596600
Alignment:
Q  164 gcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatat 263  Q
    ||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| |||||||||||||||||||||||||||||    
T  29596403 gcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatat 29596502  T
Q  264 gaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  29596503 gaatttttaagcttaaaattcatgattttattttcttatggtctttcaatcttcaaatctatgatactcgtctatgtttgcataagaatattagattt 29596600  T

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Target: chr8; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 162 - 361
Target Start/End: Complemental strand, 39198931 - 39198733
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| ||||| ||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| |||||||||||| ||||||||||||||    
T  39198931 aggcaaaattacacttttaatcccttaacttaatttcaggtaacagtttggtcctttatcttttt-tcatttcaatttggtccttattgtccattttcat 39198833  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39198832 atgaaattttaagcttaaaattcatgattttattttcttatggtctttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 39198733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 163 - 361
Target Start/End: Original strand, 33278935 - 33279134
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgt-ccattttcat 261  Q
    |||||||||||| ||||||||| ||||||||||||||||||| | | ||||| |||| |||| | |||||| ||||||||||||||| | ||||||||||    
T  33278935 ggcaaaattacacttttagtctcttaacttaatttcaggtaacaatttggtcttttacctttttttcatttcaatttggtccttttttttccattttcat 33279034  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  33279035 atgaatttttaagcttaaaattcatgattttattttcttatggtctttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 33279134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 166 - 361
Target Start/End: Complemental strand, 42685099 - 42684904
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||||  ||||||||| |||||||||||| | |||| | | ||||||||||||||| | |||||| ||||||||| |||||||||||||||||||||    
T  42685099 aaaattactcttttagtctcttaacttaattttaagtaacaatttggtcctttatctttttttcatttcaatttggtcttttttgtccattttcatatga 42685000  T
Q  266 atttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  42684999 atttttaagcttaaaattcatgattttattttcttatggtctttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 42684904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 161 - 361
Target Start/End: Original strand, 8156707 - 8156906
Alignment:
Q  161 aaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttca 260  Q
    |||| ||||||| | ||||||||| |||||||||||||| |||| ||| || |||||||||||| | |||||| ||||||||||||||||||||||||||    
T  8156707 aaggtaaaattatacttttagtctcttaacttaatttcaagtaacagtttgatcctttatcttttt-tcatttcaatttggtcctttttgtccattttca 8156805  T
Q  261 tatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagatt 360  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  8156806 tatgaaattttaagcttaaaattcatgattttattttcttatggtctttcagtcttcaaatctataatcctggtctatgtttgcataagaatattagatt 8156905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 167 - 361
Target Start/End: Complemental strand, 17495033 - 17494839
Alignment:
Q  167 aaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatgaa 266  Q
    |||||||| ||||||||  ||||||||||||||||||| | | ||||| ||||||||| | |||||| ||||||||| ||||| |||||||| |||||||    
T  17495033 aaattacacttttagtcccttaacttaatttcaggtaacattttggtcatttatctttttttcatttcaatttggtcatttttatccatttttatatgaa 17494934  T
Q  267 tttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  17494933 tttttaagcttaaaattcatgattttattttcttatggtctttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatataagattt 17494839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 163 - 361
Target Start/End: Complemental strand, 34199149 - 34198951
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||| ||||  |||||||||||| |||||| ||| ||||||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  34199149 ggcaaaattacactttcagtcccttaacttaattttaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcata 34199050  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||| |||||||||||||||||||||||||||||||||| ||| ||  ||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  34199049 tgaatctttaagcttaaaattcatgattttattttcttatagtctttcggtcttcaaatctatgatcctcttctatgtttgcataagaatattaaattt 34198951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 165 - 361
Target Start/End: Original strand, 18805748 - 18805943
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatg 264  Q
    ||||||||||||||||||   ||||||||||||||||||| ||| ||||||||||||||| | |||||| ||||||||| ||||| ||||||||||||||    
T  18805748 caaaattacatttttagttccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcatttttatccattttcatatg 18805847  T
Q  265 aatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||||||||||||||||||| ||||||||||||| || | ||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  18805848 aatttttaagcttaaaattcatgatttt-ttttcttatggtctttcaatcttcaaatatatgatcctcgtatatgtttgcataagaatattagattt 18805943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 186 - 361
Target Start/End: Original strand, 36556558 - 36556733
Alignment:
Q  186 ttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaattca 285  Q
    ||||||||||||||||||| ||| ||||||||||| ||| | |||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||||    
T  36556558 ttaacttaatttcaggtaacagtttggtcctttatttttttttcattttaatttggtcatttttgtccattttcatatgaacttttaagtttaaaattca 36556657  T
Q  286 tgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||||| || | ||||||||| ||||||| |||||||||||| ||||||||||||||||||    
T  36556658 tgattttattttcttatggtctttcaatcttcaaatttatgatcatcgtctatgtttacataagaatattagattt 36556733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 161 - 355
Target Start/End: Original strand, 30463912 - 30464106
Alignment:
Q  161 aaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttca 260  Q
    |||||||||||||||||||||||  ||||||| |||| |||||| ||| | ||||||||||||| | |||||| ||||| ||| ||||  ||||||| ||    
T  30463912 aaggcaaaattacatttttagtcccttaactttattttaggtaacagtttagtcctttatctttttttcatttcaattttgtcattttgatccatttaca 30464011  T
Q  261 tatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatatt 355  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||| |||||||||||||||||||||||    
T  30464012 tatgaatttttaagcttaaaattcatgattttattttcttatggtctttcagtgttcaaatctatgatccttgtctatgtttgcataagaatatt 30464106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 163 - 361
Target Start/End: Original strand, 41617048 - 41617238
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||| ||||||||||||||| ||| ||| |||| |||||||||| | |||||||||||||||| ||||||||||||||||||    
T  41617048 ggcaaaattacacttttagtctcttaacttaatttcagataacagtttggttctttatctttttttcattttaatttggtcatttttgtccattttcata 41617147  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||        ||||||||||||||||||||||||||| || | |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  41617148 tgaattttt--------aattcatgattttattttcttatggtctttcaatcttcaaatctatgattctcgtctatgtttgcataagaatattagattt 41617238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 163 - 355
Target Start/End: Complemental strand, 30253940 - 30253748
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  ||||||| |||| |||||| ||| | ||||||||||||| | |||||| ||||| ||||||||  ||||||| ||||    
T  30253940 ggcaaaattacacttttagtcccttaactttattttaggtaacagtttagtcctttatctttttttcatttcaattttgtccttttgatccatttacata 30253841  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatatt 355  Q
    ||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||    
T  30253840 tgaatttttaagcttaaaagtcatgattttattttcttatggtctttcagtcttcaaatctatgatccttgtctatgtttgcataagaatatt 30253748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 166 - 355
Target Start/End: Original strand, 27712767 - 27712956
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||||| ||||||||  |||| || |||| |||||| ||| | ||||||||||||| | |||||| ||||| ||||||||  ||||||| |||||||    
T  27712767 aaaattacacttttagtcccttaattttattttaggtaacagtttagtcctttatctttttttcatttcaattttgtccttttgatccatttacatatga 27712866  T
Q  266 atttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatatt 355  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||    
T  27712867 atttttaagcttaaaattcatgattttattttcttatggtctttcagtcttcaaatctatgatccttgtctatgtttgcataagaatatt 27712956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 162 - 361
Target Start/End: Original strand, 18929701 - 18929897
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    |||||||||||||  |||||||  ||||||||||||||| ||| ||| ||||||||||||||| | |||||| |||||||||||||||||| ||||||||    
T  18929701 aggcaaaattacacatttagtcccttaacttaatttcagataacagtatggtcctttatctttttttcatttcaatttggtcctttttgtctattttcat 18929800  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
      || ||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||| |||||||| ||||||||    
T  18929801 --gagtttttaaacttaaaattcatgattttattttcttatggtccttcagtctttaaatctatgatcttcgtctatgtttgtataagaat-ttagattt 18929897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 163 - 355
Target Start/End: Complemental strand, 21661041 - 21660849
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    ||||||||||||  |||||||  ||||||| |||| ||||||  || | ||||||||||||| | |||||| ||||| ||||||||  ||||||| ||||    
T  21661041 ggcaaaattacacatttagtcccttaactttattttaggtaacggtttagtcctttatctttttttcatttcaattttgtccttttgatccatttacata 21660942  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatatt 355  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| | |||||||||||||||||||||||    
T  21660941 tgaatttttaagcttaaaattcatgattttattttcttatggtctttcagtcttcaaatctatgatctttgtctatgtttgcataagaatatt 21660849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 163 - 355
Target Start/End: Complemental strand, 28828530 - 28828338
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  ||||||| |||| |||||| | | | ||||||||||||| | |||||| ||||| ||||||||  |||||||  |||    
T  28828530 ggcaaaattacacttttagtcccttaactttattttaggtaataatttagtcctttatctttttttcatttcaattttgtccttttgatccatttaaata 28828431  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatatt 355  Q
    ||||||||||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||    
T  28828430 tgaatttttaagcttaaaattcatgcttttattttcttatggtctttcagtcttcaaatctatgatccttgtctatgtttgcataagaatatt 28828338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 165 - 355
Target Start/End: Original strand, 37727201 - 37727391
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatg 264  Q
    |||||||||| ||||||||  ||||||| ||||||||||| ||| | ||||||||||||||| | |||| ||||| ||||||||  ||||||| |||| |    
T  37727201 caaaattacacttttagtcccttaactttatttcaggtaacagtttagtcctttatctttatttaatttcaattttgtccttttgatccatttacatacg 37727300  T
Q  265 aatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatatt 355  Q
    ||||||||||||||||||| |||||||||||||||||||||| || ||||||||||| |||| |||| |||||||||||||||||||||||    
T  37727301 aatttttaagcttaaaattaatgattttattttcttatggtctttcagtcttcaaatttatgttccttgtctatgtttgcataagaatatt 37727391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 228 - 352
Target Start/End: Complemental strand, 29726776 - 29726652
Alignment:
Q  228 tcattttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatga 327  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || | |||||||||||||||    
T  29726776 tcatttcaatttggtcctttttgtccattttcatatgaatttttaagcttaaaatttatgattttattttcttatggtctttcaatcttcaaatctatga 29726677  T
Q  328 tcctcgtctatgtttgcataagaat 352  Q
    |||||||||||||||||||||||||    
T  29726676 tcctcgtctatgtttgcataagaat 29726652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 163 - 358
Target Start/End: Complemental strand, 40277543 - 40277341
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatat-------cattttaatttggtcctttttgtccat 255  Q
    |||||||||||| ||||||||  |||||||||||| |||||| ||| ||||| ||||||||| | |       ||||||||||||||| |||| || |||    
T  40277543 ggcaaaattacacttttagtcacttaacttaattttaggtaatagtttggtcttttatctttcttttttttttcattttaatttggtcattttcgttcat 40277444  T
Q  256 tttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatatt 355  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||| |||||    
T  40277443 tttcatatacatttttaagcttaaaattcatgattttattttcttatggtcttccagtcttcaaatctatgatcctcgtctatgtttgcataagtatatt 40277344  T
Q  356 aga 358  Q
    |||    
T  40277343 aga 40277341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 162 - 355
Target Start/End: Complemental strand, 4968326 - 4968132
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttg-tccattttca 260  Q
    ||||||||||||| |||||||   ||||  | ||||||||||| ||| | ||||||||||||| | |||||| ||||| |||||||||| ||||||| ||    
T  4968326 aggcaaaattacacttttagttcattaatcttatttcaggtaacagtttagtcctttatctttttttcatttcaattttgtcctttttgatccatttaca 4968227  T
Q  261 tatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatatt 355  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |  ||||||||||||||||||||||    
T  4968226 tatgaacttttaagcttaaaattcatgattttattttcttatggtctttcagtcttcaaatctatgatctttatctatgtttgcataagaatatt 4968132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 162 - 355
Target Start/End: Original strand, 9887133 - 9887327
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttg-tccattttca 260  Q
    ||||||||||||| |||||||   ||||  | ||||||||||| ||| | ||||||||||||| | |||||| ||||| |||||||||| ||||||| ||    
T  9887133 aggcaaaattacacttttagttcattaatcttatttcaggtaacagtttagtcctttatctttttttcatttcaattttgtcctttttgatccatttaca 9887232  T
Q  261 tatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatatt 355  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |  ||||||||||||||||||||||    
T  9887233 tatgaacttttaagcttaaaattcatgattttattttcttatggtctttcagtcttcaaatctatgatctttatctatgtttgcataagaatatt 9887327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 160 - 361
Target Start/End: Complemental strand, 26938501 - 26938302
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttc 259  Q
    |||| |||||||||| ||||||||  |||||||||||| |||||| | | | ||||||||| ||| |  ||||| ||||||||| |||||||||||||||    
T  26938501 aaagacaaaattacacttttagtcccttaacttaattttaggtaacaatttagtcctttattttttt--catttcaatttggtcatttttgtccattttc 26938404  T
Q  260 atatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagat 359  Q
    ||||  | ||||||||||||||||||||||||||||||||||||||| || |||||| |||||||| ||||| ||||||||||| |||||||||||||||    
T  26938403 atatacagttttaagcttaaaattcatgattttattttcttatggtctttcagtctttaaatctataatcctggtctatgtttgtataagaatattagat 26938304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 161 - 361
Target Start/End: Original strand, 34632223 - 34632423
Alignment:
Q  161 aaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttca 260  Q
    |||||||||||||| ||||  ||  ||||||| |||| |||||| | | | ||||||||||||| | |||||| ||||| ||||||||  ||||||| ||    
T  34632223 aaggcaaaattacacttttgatcccttaactttattttaggtaacaatttagtcctttatctttttttcatttcaattttgtccttttgatccatttaca 34632322  T
Q  261 tatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagatt 360  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||| | |||||||||||||||| ||||||| |||    
T  34632323 tatgaatttttaagcttaaaattcataattttattttcttatggtctttcagtcttcaaatctatgatcattgtctatgtttgcataaaaatattaaatt 34632422  T
Q  361 t 361  Q
    |    
T  34632423 t 34632423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 160 - 355
Target Start/End: Original strand, 1235581 - 1235776
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttc 259  Q
    ||||| ||||||||| ||||| ||  |||| || |||| |||||| ||| | ||| ||||||||| | |||||| ||||| |||||||   ||||||| |    
T  1235581 aaaggtaaaattacacttttaatcatttaattttattttaggtaacagtttagtcatttatctttttttcatttcaattttgtcctttcgatccatttac 1235680  T
Q  260 atatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatatt 355  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||| | |||||||||||||||||||||||    
T  1235681 atatgaatttttaagcttaaaattcatgattttattttcttatggtctttcagtcttcaaatctataatctttgtctatgtttgcataagaatatt 1235776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 218 - 361
Target Start/End: Complemental strand, 33527199 - 33527056
Alignment:
Q  218 tatctttatatcattttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttc 317  Q
    ||||||| | |||||| | ||||||| |||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||    
T  33527199 tatctttttttcatttcagtttggtcgtttttgtttattttcatatgaaattttaagcttaaaattcatgattttattttcttatggtctttcagtcttc 33527100  T
Q  318 aaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||||||||||  ||||||||||| ||||    
T  33527099 aaatctatgatcctcgtctatgtttgtttaagaatattatattt 33527056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 163 - 355
Target Start/End: Complemental strand, 10925416 - 10925224
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  ||||||| |||| |||||  | | |  |||||||||||| | |||||| |||||  || ||||  ||||||| ||||    
T  10925416 ggcaaaattacacttttagtcccttaactttattttaggtatcaatttaatcctttatctttttttcatttcaattttatctttttgatccatttacata 10925317  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatatt 355  Q
    |||||||||||||||||||||||||||||||||||||||||||| || | |||||| |||||||||||| || ||||||||||||||||||||    
T  10925316 tgaatttttaagcttaaaattcatgattttattttcttatggtctttcaatcttcagatctatgatccttgtttatgtttgcataagaatatt 10925224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 166 - 283
Target Start/End: Complemental strand, 34632536 - 34632419
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||||||||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| |||||||||||||||||||||||||||||      
T  34632536 aaaattacatttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatac 34632437  T
Q  266 atttttaagcttaaaatt 283  Q
    ||||| |||||| |||||    
T  34632436 attttcaagcttcaaatt 34632419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 162 - 357
Target Start/End: Original strand, 2241470 - 2241666
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    |||||||||| || ||||||||  ||||||||||||||||||| ||| |||||||||||||||   |||||| | ||| |||||||| |||||||| | |    
T  2241470 aggcaaaatttcacttttagtcccttaacttaatttcaggtaatagtttggtcctttatcttttcttcatttcagttttgtccttttggtccatttgcgt 2241569  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatc-ctcgtctatgtttgcataagaatattag 357  Q
    ||| ||||| |||||| ||||||||| |||||||||||||||| |    | |||||||||||||||||  || ||||||||||||||  ||||||||    
T  2241570 atggattttcaagcttcaaattcatggttttattttcttatggcctcccaatcttcaaatctatgatctttcatctatgtttgcatagaaatattag 2241666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 163 - 283
Target Start/End: Complemental strand, 27713078 - 27712958
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  27713078 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcata 27712979  T
Q  263 tgaatttttaagcttaaaatt 283  Q
    |  ||||| |||||| |||||    
T  27712978 tacattttcaagcttcaaatt 27712958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 162 - 282
Target Start/End: Complemental strand, 36556850 - 36556730
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||||||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| |||||||||||||||||||||||| ||    
T  36556850 aggcaaaattacatttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccatttttat 36556751  T
Q  262 atgaatttttaagcttaaaat 282  Q
    ||  ||||| |||||| ||||    
T  36556750 atacattttcaagcttcaaat 36556730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 163 - 277
Target Start/End: Original strand, 10925103 - 10925217
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||||||||||| | |||||||||||||| |||| ||| ||||||||||||||| | ||||||||||||||||||||||||| |||||||||    
T  10925103 ggcaaaattacatttttagtttcttaacttaatttcaagtaacagtttggtcctttatctttttttcattttaatttggtcctttttgtctattttcata 10925202  T
Q  263 tgaatttttaagctt 277  Q
    |  ||||| ||||||    
T  10925203 tacattttcaagctt 10925217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 163 - 277
Target Start/End: Complemental strand, 26187442 - 26187328
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||| ||||||||||||||| | |||||| ||||| |||||||| |||||||||||||    
T  26187442 ggcaaaattacaattttagtccgttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaattttgtccttttggtccattttcata 26187343  T
Q  263 tgaatttttaagctt 277  Q
    || ||||| ||||||    
T  26187342 tggattttcaagctt 26187328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 156 - 283
Target Start/End: Original strand, 34198828 - 34198955
Alignment:
Q  156 aattaaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccat 255  Q
    |||| ||||||||||||||||||||||   ||||||||||||||||||| ||| ||||||||||||  | | |||||| |||||||||||||||||||||    
T  34198828 aatttaaggcaaaattacatttttagttctttaacttaatttcaggtaacagtttggtcctttatcaatttttcatttcaatttggtcctttttgtccat 34198927  T
Q  256 tttcatatgaatttttaagcttaaaatt 283  Q
    ||||||||  ||||| |||||| |||||    
T  34198928 tttcatatacattttcaagcttcaaatt 34198955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 162 - 283
Target Start/End: Original strand, 21660725 - 21660847
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatc-attttaatttggtcctttttgtccattttca 260  Q
    ||||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | || |||| ||||||||| ||||||||||||||||    
T  21660725 aggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttctatttcaatttggtcttttttgtccattttca 21660824  T
Q  261 tatgaatttttaagcttaaaatt 283  Q
    |||  |||||||||||| |||||    
T  21660825 tatacatttttaagcttcaaatt 21660847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 165 - 283
Target Start/End: Original strand, 30253628 - 30253746
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatg 264  Q
    |||||||||| ||||||||  ||||||||||||||||||| ||| ||||| ||||||||| | |||||| |||||||||||||||||||||||||||||     
T  30253628 caaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcatttatctttttttcatttcaatttggtcctttttgtccattttcatata 30253727  T
Q  265 aatttttaagcttaaaatt 283  Q
     ||||| |||||| |||||    
T  30253728 cattttcaagcttcaaatt 30253746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 161 - 354
Target Start/End: Complemental strand, 43497518 - 43497330
Alignment:
Q  161 aaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttca 260  Q
    |||||||||||||| ||||| ||  |||||||||||| |||||| | | ||||     |||||| | |||||| ||||| |||||||| |||||||| ||    
T  43497518 aaggcaaaattacaattttaatcccttaacttaattttaggtaatattttggt-----atctttttttcatttcaatttcgtccttttggtccatttgca 43497424  T
Q  261 tatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatat 354  Q
    |||||||||| |||||| ||||||||| ||||||||| ||||||   || | ||||||||| |||| || || |||||||||||||||||||||    
T  43497423 tatgaattttcaagcttcaaattcatggttttatttttttatggcatttcaatcttcaaatttatggtcttcatctatgtttgcataagaatat 43497330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 233 - 356
Target Start/End: Original strand, 26187198 - 26187321
Alignment:
Q  233 ttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctc 332  Q
    ||||||| |||||||| |||||||| |||||||||||| |||||| ||||||||| ||||||||| |||||| | |  | |||||||||||||| || ||    
T  26187198 ttaattttgtccttttggtccatttacatatgaattttcaagcttcaaattcatggttttatttttttatggccttccaatcttcaaatctatggtcttc 26187297  T
Q  333 gtctatgtttgcataagaatatta 356  Q
     |||||||||||||||||||||||    
T  26187298 ttctatgtttgcataagaatatta 26187321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 163 - 361
Target Start/End: Complemental strand, 12649797 - 12649596
Alignment:
Q  163 ggcaaaattacatttttag-tctgttaacttaatttcaggtaagagtgtggtcctttatctttatat--cattttaatttggtcctttttgtccattttc 259  Q
    |||||| |||||||||||| ||  |||||||||||| ||||||   | ||||| ||||||||| | |  ||||| |||||  | ||||| ||||||||||    
T  12649797 ggcaaatttacatttttagctcctttaacttaattttaggtaactatttggtcttttatctttttttttcatttaaatttttttcttttggtccattttc 12649698  T
Q  260 atatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagat 359  Q
    ||||||||||| || ||| ||||||||| |||||||||||||||||| || | |||| |||| | || ||  | ||||||||||||||||||||||||||    
T  12649697 atatgaattttcaaacttcaaattcatggttttattttcttatggtctttcaatctttaaatatgtggtctccatctatgtttgcataagaatattagat 12649598  T
Q  360 tt 361  Q
    ||    
T  12649597 tt 12649596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 160 - 282
Target Start/End: Original strand, 26938183 - 26938305
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttc 259  Q
    ||||||||||||| | ||||||||  ||||||||||||||||||| | | ||||||||||||||| | |||||| ||||||||| |||||||||||||||    
T  26938183 aaaggcaaaattataattttagtcccttaacttaatttcaggtaacaatttggtcctttatctttttttcatttcaatttggtcatttttgtccattttc 26938282  T
Q  260 atatgaatttttaagcttaaaat 282  Q
    ||||  ||||| |||||| ||||    
T  26938283 atatacattttcaagcttcaaat 26938305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 162 - 283
Target Start/End: Original strand, 148292 - 148413
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| |||| |||  |||||||||||| |||||| | | ||||||||||||||| | |||||| |||||||||||||||||||||||||||    
T  148292 aggcaaaattacacttttggtcccttaacttaattttaggtaacaatttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcat 148391  T
Q  262 atgaatttttaagcttaaaatt 283  Q
    ||  ||||| |||||| |||||    
T  148392 atacattttcaagcttcaaatt 148413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 288 - 361
Target Start/End: Complemental strand, 148482 - 148409
Alignment:
Q  288 attttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  148482 attttattttcttatggtccttcagtcttcaaatctatgatcctcatctatgtttgcataagaatattaaattt 148409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 166 - 295
Target Start/End: Original strand, 34213388 - 34213517
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||||| ||||||||  ||||||| |||| |||||| ||| ||||||||||||||||| | |||| ||||| ||||||||  |||||||  ||||||    
T  34213388 aaaattacacttttagtcccttaactttattttaggtaacagtttggtcctttatctttatttaatttcaattttgtccttttgatccatttatatatga 34213487  T
Q  266 atttttaagcttaaaattcatgattttatt 295  Q
    |||||||| ||||||||| |||||||||||    
T  34213488 atttttaaccttaaaattaatgattttatt 34213517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 166 - 263
Target Start/End: Complemental strand, 41617351 - 41617254
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatat 263  Q
    |||||||||||||||| |  ||||||||||||||||||| ||| ||||||||||||||| | |||||||||||||||| |||||||||||||| ||||    
T  41617351 aaaattacatttttagccccttaacttaatttcaggtaacagtttggtcctttatctttttttcattttaatttggtcatttttgtccatttttatat 41617254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 166 - 258
Target Start/End: Complemental strand, 148576 - 148484
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccatttt 258  Q
    ||||||||||||||||||  ||||||||||||||||||| ||| | ||||||||||||| | |||||| ||||||||||||||||||||||||    
T  148576 aaaattacatttttagtcccttaacttaatttcaggtaacagtttagtcctttatctttttttcatttcaatttggtcctttttgtccatttt 148484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 162 - 282
Target Start/End: Complemental strand, 8157023 - 8156903
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||| |||||||||   ||||||||||||||||||| ||| ||||||||||||||| | |||||| ||||||||| ||||||||||||||| |    
T  8157023 aggcaaaattatatttttagttccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcttttttgtccattttcgt 8156924  T
Q  262 atgaatttttaagcttaaaat 282  Q
    ||  ||||| |||||| ||||    
T  8156923 atacattttcaagcttcaaat 8156903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 161 - 282
Target Start/End: Complemental strand, 33279254 - 33279131
Alignment:
Q  161 aaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattt--taatttggtcctttttgtccatttt 258  Q
    |||||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | ||||||   ||||||||||||||||||||||||    
T  33279254 aaggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaaaatttggtcctttttgtccatttt 33279155  T
Q  259 catatgaatttttaagcttaaaat 282  Q
     ||||  ||||| |||||| ||||    
T  33279154 tatatacattttcaagcttcaaat 33279131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 40277237 - 40277336
Alignment:
Q  178 ttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatgaatttttaagctt 277  Q
    ||||||| ||||||||||||||||||| ||| ||||||||||||||| | |||||| ||||||||| |||||||||||||||||||  ||||| ||||||    
T  40277237 ttagtctcttaacttaatttcaggtaatagtttggtcctttatctttttttcatttcaatttggtcatttttgtccattttcatatacattttcaagctt 40277336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 163 - 361
Target Start/End: Original strand, 24419442 - 24419640
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    ||||||||||| |||||| ||  |||||||||||| |||||| | | ||||||||||| ||| | |||||| | |||  |||||||||| ||||| ||||    
T  24419442 ggcaaaattacgtttttaatcctttaacttaattttaggtaataatttggtcctttatatttttttcatttcattttcatcctttttgttcatttgcata 24419541  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||  | ||| |||||||||||| ||  || || | || | |||||||||||| | || |  |||||||||| |||||||||||||||||    
T  24419542 tgaatttttaagtctcaaagtcatgattttatgtttctagggcctttcaatcttcaaatctacggtctttatctatgtttgtataagaatattagattt 24419640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 165 - 283
Target Start/End: Original strand, 28828218 - 28828336
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatg 264  Q
    |||||||||| ||||||||  |||||||||||||| |||| | | ||||||||||||||| | |||||| ||||||||||| |||||||||||||||||     
T  28828218 caaaattacacttttagtcccttaacttaatttcaagtaacaatttggtcctttatctttttttcatttcaatttggtcctgtttgtccattttcatata 28828317  T
Q  265 aatttttaagcttaaaatt 283  Q
     ||||| |||||| |||||    
T  28828318 tattttcaagcttcaaatt 28828336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 165 - 263
Target Start/End: Original strand, 33526942 - 33527040
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatat 263  Q
    |||||||||||||||||||  ||||||||||||||| ||| ||| ||||| ||||||||| | |||||| ||||| |||||||||||||||||||||||    
T  33526942 caaaattacatttttagtcccttaacttaatttcagataacagtttggtcttttatctttttttcatttcaattttgtcctttttgtccattttcatat 33527040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 163 - 282
Target Start/End: Complemental strand, 29596716 - 29596597
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||| ||||||||||  |||| |||||||||| ||| | | ||||||||||||||| | | ||||||||||||||||||||||||||||| |||    
T  29596716 ggcaaaattatatttttagtcctttaatttaatttcagataatattttggtcctttatcttttttttattttaatttggtcctttttgtccatttttata 29596617  T
Q  263 tgaatttttaagcttaaaat 282  Q
    |  ||||| |||||| ||||    
T  29596616 tacattttcaagctttaaat 29596597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 159 - 262
Target Start/End: Original strand, 39198611 - 39198716
Alignment:
Q  159 taaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtccttta--tctttatatcattttaatttggtcctttttgtccatt 256  Q
    |||||||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||  | ||| | |||||| ||||||||| ||||||||||||    
T  39198611 taaaggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttacctttttttttcatttcaatttggtcttttttgtccatt 39198710  T
Q  257 ttcata 262  Q
    ||||||    
T  39198711 ttcata 39198716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 161 - 270
Target Start/End: Complemental strand, 2241791 - 2241682
Alignment:
Q  161 aaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttca 260  Q
    |||||||||||||| ||||||||  |||||||| || || |||| ||| ||||||||||||||| | |||||| ||||| |||||||| |||||||| ||    
T  2241791 aaggcaaaattacacttttagtcccttaacttagttccatgtaacagtttggtcctttatctttttttcatttcaattttgtccttttggtccatttgca 2241692  T
Q  261 tatgaatttt 270  Q
    ||||||||||    
T  2241691 tatgaatttt 2241682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 166 - 283
Target Start/End: Complemental strand, 30464225 - 30464108
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||||| ||||||||  ||||||||||||||  ||| ||| || |||||||||||| | |||||| ||||||||||||||||| |||||||||||      
T  30464225 aaaattacacttttagtcctttaacttaatttcaaataacagtttgatcctttatctttttttcatttgaatttggtcctttttgtgcattttcatatac 30464126  T
Q  266 atttttaagcttaaaatt 283  Q
    ||||| |||||| |||||    
T  30464125 attttcaagcttcaaatt 30464108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 42684786 - 42684907
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatc-tttatatcattttaatttggtcctttttgtccattttca 260  Q
    ||||||||||||| ||||||||  ||||||||||||||||||| ||| |||| ||||||| ||| | |||||| ||||||||| |||||||| ||||| |    
T  42684786 aggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggttctttatcttttttttcatttcaatttggtcatttttgtcaattttta 42684885  T
Q  261 tatgaatttttaagcttaaaat 282  Q
    |||  ||||| |||||| ||||    
T  42684886 tatacattttcaagcttcaaat 42684907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 282
Target Start/End: Complemental strand, 38229923 - 38229805
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    ||||||||||||||||||||   |||||||||||| || ||| | | | ||| ||||||||| | |||||| ||||| |||||||||||||||||| |||    
T  38229923 ggcaaaattacatttttagttctttaacttaattttagataacaatttagtcatttatcttttt-tcatttcaattttgtcctttttgtccatttttata 38229825  T
Q  263 tgaatttttaagcttaaaat 282  Q
    || ||||| |||||||||||    
T  38229824 tggattttcaagcttaaaat 38229805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 163 - 260
Target Start/End: Complemental strand, 37727502 - 37727404
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatc-tttatatcattttaatttggtcctttttgtccattttca 260  Q
    |||||||||||| ||||||||  |||| |||||||||||||| | | ||||||||| || ||| | |||||| ||||||||||||||||||||||||||    
T  37727502 ggcaaaattacaattttagtcccttaatttaatttcaggtaacaatttggtcctttgtcttttttttcatttcaatttggtcctttttgtccattttca 37727404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 186 - 283
Target Start/End: Complemental strand, 1235874 - 1235778
Alignment:
Q  186 ttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaatt 283  Q
    ||||||||||||||||||| ||| |||| |||||||||| | ||||||||| |||||| ||||||||||| |||||||  ||||| |||||| |||||    
T  1235874 ttaacttaatttcaggtaatagtttggttctttatcttttt-tcattttaacttggtcatttttgtccatcttcatatacattttcaagcttcaaatt 1235778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 164 - 263
Target Start/End: Complemental strand, 18930011 - 18929913
Alignment:
Q  164 gcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatat 263  Q
    ||||||||||||||||| ||  ||||||||||||||| ||| ||| ||||| |||| |||| | |  |||||||||||| ||||||||||||||||||||    
T  18930011 gcaaaattacatttttaatcatttaacttaatttcagataacagtttggtcttttacctttttttttttttaatttggt-ctttttgtccattttcatat 18929913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 282
Target Start/End: Original strand, 43497208 - 43497326
Alignment:
Q  164 gcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatat 263  Q
    ||||||||| | ||||||||  |||||||||||| || ||| | | || |||||||||||| | | ||||||||||||||||||| ||| ||||||||||    
T  43497208 gcaaaattatacttttagtcccttaacttaattttagataacaatttgatcctttatctttttttaattttaatttggtccttttggtcgattttcatat 43497307  T
Q  264 gaatttttaagcttaaaat 282  Q
      ||||| |||||| ||||    
T  43497308 agattttcaagcttcaaat 43497326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 269
Target Start/End: Original strand, 2785755 - 2785857
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||||| ||||| || |||||||||||||||||||| | | || || ||||||||| | |||||||| ||| |||||||| |||||||| ||||||     
T  2785755 aaaattacacttttaatccgttaacttaatttcaggtaaaaatttgatcatttatcttt-tttcattttatttttgtccttttagtccatttgcatatgg 2785853  T
Q  266 attt 269  Q
    ||||    
T  2785854 attt 2785857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 177 - 283
Target Start/End: Original strand, 4968024 - 4968130
Alignment:
Q  177 tttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatgaatttttaagct 276  Q
    |||||||  ||||||||||||| ||||| | | |  |||||||||||| | |||||| ||| |||||||||||||||||||||| ||  ||||| |||||    
T  4968024 tttagtcccttaacttaatttctggtaacaatttattcctttatctttttttcatttcaatatggtcctttttgtccattttcacatacattttcaagct 4968123  T
Q  277 taaaatt 283  Q
    | |||||    
T  4968124 ttaaatt 4968130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 177 - 283
Target Start/End: Complemental strand, 9887435 - 9887329
Alignment:
Q  177 tttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatgaatttttaagct 276  Q
    |||||||  ||||||||||||| ||||| | | |  |||||||||||| | |||||| ||| |||||||||||||||||||||| ||  ||||| |||||    
T  9887435 tttagtcccttaacttaatttctggtaacaatttattcctttatctttttttcatttcaatatggtcctttttgtccattttcacatacattttcaagct 9887336  T
Q  277 taaaatt 283  Q
    | |||||    
T  9887335 ttaaatt 9887329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 263
Target Start/End: Complemental strand, 18806056 - 18805959
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatat 263  Q
    ||||||||| ||||||||  || ||||||||| |||||| | | |||| |||| ||||| | ||||||| |||||||| ||||| |||||||||||||    
T  18806056 aaaattacacttttagtccctttacttaattttaggtaacaatttggttctttgtctttttttcattttcatttggtcttttttatccattttcatat 18805959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 270
Target Start/End: Complemental strand, 24419756 - 24419649
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||| ||||||| ||  |||||||||||| |||||| | | || |||||||| ||| | |||||| ||||| ||| |||| ||||||||| |||    
T  24419756 ggcaaaattatatttttaatcccttaacttaattttaggtaataatttgatcctttatttttttttcatttcaattttgtcattttagtccatttttata 24419657  T
Q  263 tgaatttt 270  Q
    || |||||    
T  24419656 tggatttt 24419649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 361
Target Start/End: Original strand, 38229689 - 38229808
Alignment:
Q  242 tcctttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtt 341  Q
    |||||||| | ||||| |||||||||||| |||  | ||| || ||||||||||||  || |||| || | |||||||||||| | || |  ||||||||    
T  38229689 tcctttttattcatttgcatatgaattttcaagtctcaaagtcttgattttatttttctagggtctttcaatcttcaaatctacggtctttatctatgtt 38229788  T
Q  342 tgcataagaatattagattt 361  Q
    || |||||||||||||||||    
T  38229789 tgtataagaatattagattt 38229808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 282
Target Start/End: Complemental strand, 35560969 - 35560851
Alignment:
Q  164 gcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatat 263  Q
    ||||||||||| |||||||   |||||||||||| |||||| ||| |  || ||||||||| | |||||| |||||  |||||||  |||| || |||||    
T  35560969 gcaaaattacacttttagttctttaacttaattttaggtaacagtttaatcatttatctttttttcatttcaattttatccttttgatccagttacatat 35560870  T
Q  264 gaatttttaagcttaaaat 282  Q
    | |||||||||||| ||||    
T  35560869 ggatttttaagcttcaaat 35560851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 298
Target Start/End: Original strand, 24566493 - 24566554
Alignment:
Q  237 tttggtcctttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttc 298  Q
    |||||| ||||| |||||||| |||||| |||||||||||| ||||  ||||||||||||||    
T  24566493 tttggtacttttagtccatttgcatatggatttttaagctttaaatctatgattttattttc 24566554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 282
Target Start/End: Original strand, 12649503 - 12649599
Alignment:
Q  186 ttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaat 282  Q
    ||||||| |||| |||||| | | ||||| ||||||||| | |||||| |||||  ||||||| ||| ||||||||||| ||||| |||||| ||||    
T  12649503 ttaactttattttaggtaacaatttggtcttttatctttttttcatttaaattttttccttttggtctattttcatatggattttcaagcttcaaat 12649599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 7672941 - 7672824
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttat-ctttatatcattttaatttggtcctttttgtccattttcatatg 264  Q
    ||||||| ||||||||||  |||| ||||||||| |||  | | | ||| ||||| |||| | |||||| ||||| ||| |||| ||| |||| ||||||    
T  7672941 aaaattatatttttagtcccttaatttaatttcaagtaccaatttagtcttttattctttttttcatttcaattttgtcattttcgtctatttgcatatg 7672842  T
Q  265 aatttttaagcttaaaat 282  Q
    ||||||||||||| ||||    
T  7672841 aatttttaagcttcaaat 7672824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 148; Significance: 5e-78; HSPs: 89)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 166 - 361
Target Start/End: Complemental strand, 11724928 - 11724733
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||||| ||||||||| ||||||||||||||| ||| ||| |||| |||||||||| | |||||| |||||||||||||||||||||||||||||||    
T  11724928 aaaattacacttttagtctcttaacttaatttcagataaaagtttggttctttatctttttttcatttcaatttggtcctttttgtccattttcatatga 11724829  T
Q  266 atttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11724828 atttttaagcttaaaattcatgattttattttcttatggtctttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 11724733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 163 - 361
Target Start/End: Original strand, 35411877 - 35412075
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  ||||||||||||| |||||  || ||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  35411877 ggcaaaattacacttttagtcccttaacttaatttctggtaactgtttggtcctttatctttttttcattttaatttggtcctttttgtccattttcata 35411976  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  35411977 tgaaattttaagcttaaaattcatgattttattttcttatggtcttttggttttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 35412075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 161 - 361
Target Start/End: Complemental strand, 9027341 - 9027141
Alignment:
Q  161 aaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttca 260  Q
    |||||||||||||| ||||| ||  ||||||||||||||||||| ||| | ||||||||||||| | |||||| ||||||||||||||||||||||||||    
T  9027341 aaggcaaaattacacttttaatcccttaacttaatttcaggtaacagtttagtcctttatctttttttcatttcaatttggtcctttttgtccattttca 9027242  T
Q  261 tatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagatt 360  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9027241 tatgaatttttaagcttagaattcatgattttattttcttatggtctttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatt 9027142  T
Q  361 t 361  Q
    |    
T  9027141 t 9027141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 166 - 361
Target Start/End: Original strand, 17549071 - 17549267
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatat-cattttaatttggtcctttttgtccattttcatatg 264  Q
    ||||||||||||||||||  ||||||||||||||||||| ||| | ||||||||||||| | | ||||||||||||||||||||||||||||||||||||    
T  17549071 aaaattacatttttagtcccttaacttaatttcaggtaacagtttagtcctttatcttttttttcattttaatttggtcctttttgtccattttcatatg 17549170  T
Q  265 aatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||| ||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  17549171 aatttttaagtttaaaattcatgattttattttcttatggtctttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 17549267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 157 - 361
Target Start/End: Complemental strand, 30488400 - 30488196
Alignment:
Q  157 attaaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccatt 256  Q
    |||| ||||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| ||||||||| ||||||||||||    
T  30488400 attataggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcttttttgtccatt 30488301  T
Q  257 ttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatatta 356  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||| || | ||||||||||||||||||||||||||||||||||||||||||||    
T  30488300 ttcatatgaatttttaatcttaaaattcatgattttattttctcatggtctttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatatta 30488201  T
Q  357 gattt 361  Q
    |||||    
T  30488200 gattt 30488196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 162 - 361
Target Start/End: Complemental strand, 341627 - 341428
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| ||||| ||  |||||||||||| |||||| ||| ||||||||||||||| | |||||| |||||||||||||||||||||||||||    
T  341627 aggcaaaattacagttttaatcccttaacttaattttaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcat 341528  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||  |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  341527 atacatttttaagcttaaaattcatgattttattttcttatgatcttttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 341428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 163 - 361
Target Start/End: Complemental strand, 26499725 - 26499527
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| ||||||||| ||||||||||||||||||    
T  26499725 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcatttttgtccattttcata 26499626  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||| ||||||| ||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  26499625 tgaacttttaagtttaaaattcatgattttattttcttatggtctttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 26499527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 160 - 361
Target Start/End: Original strand, 42950516 - 42950717
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttc 259  Q
    ||||| ||||||| ||||||| ||| ||||||||||||||| ||| | | ||| ||||||||||| | |||||| |||||||||||||||||||||||||    
T  42950516 aaaggtaaaattatatttttaatctcttaacttaatttcagataacattttggacctttatctttttttcatttcaatttggtcctttttgtccattttc 42950615  T
Q  260 atatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagat 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  42950616 atatgaatttttaagcttaaaattcatgattttattttcttatggtctttcagtcttcaaatctatgatcctcttctatgtttgcataagaatattagat 42950715  T
Q  360 tt 361  Q
    ||    
T  42950716 tt 42950717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 164 - 361
Target Start/End: Original strand, 33274396 - 33274595
Alignment:
Q  164 gcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatat--cattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||||||||||  ||||||||||||||||||| ||| | ||| ||||||||||| |  ||||| |||| | ||||||||||||||||||||    
T  33274396 gcaaaattacatttttagtcccttaacttaatttcaggtaacagtttagtcttttatctttatttttcatttcaattcgatcctttttgtccattttcat 33274495  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33274496 atgaatttttaagcttaaaattcatgattttattttcttatggtctttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 33274595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 160 - 361
Target Start/End: Original strand, 10192081 - 10192283
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtccttt-atctttatatcattttaatttggtcctttttgtccatttt 258  Q
    ||||||||||||||| ||||||||  ||||||||||||||||||| | | ||||||||| |||||| | |||||| ||||||| ||||||||||||||||    
T  10192081 aaaggcaaaattacacttttagtcccttaacttaatttcaggtaacaatttggtccttttatctttttttcatttcaatttggccctttttgtccatttt 10192180  T
Q  259 catatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattaga 358  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||| ||||||||||||||||||||||||||||||||||||    
T  10192181 catatgaatttttaagcttaaaattcatgattttattttcttatggtctttcaatcttcaaatttatgatcctcgtctatgtttgcataagaatattaga 10192280  T
Q  359 ttt 361  Q
    |||    
T  10192281 ttt 10192283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 163 - 361
Target Start/End: Original strand, 44490304 - 44490502
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| |||||||   ||||||||||||||||||| ||| | ||||||||||||| | | |||| ||||||||||||||||||||||||||||    
T  44490304 ggcaaaattacacttttagttccttaacttaatttcaggtaacagtttagtcctttatctttttttaatttcaatttggtcctttttgtccattttcata 44490403  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    | || ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44490404 taaaattttaagcttaaaattcatgattttattttcttatggtctttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 44490502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 164 - 361
Target Start/End: Complemental strand, 28789180 - 28788983
Alignment:
Q  164 gcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatat 263  Q
    ||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| |||||||||||||||||||||||||| ||    
T  28789180 gcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcaaat 28789081  T
Q  264 gaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||| ||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||| |||| |||||||||||||||||    
T  28789080 gaaattttaagcttaaaattcatgattttattttcttatggtctttcagtgttcaaatctatgatcctcgtctatatttgtataagaatattagattt 28788983  T

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Target: chr2; HSP #13
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 161 - 361
Target Start/End: Original strand, 42030537 - 42030737
Alignment:
Q  161 aaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttca 260  Q
    |||||||||||||| ||||||||  |||||||||||||| |||| |||  |||||||||||||| | |||||| ||||||||||||||||||||||||||    
T  42030537 aaggcaaaattacacttttagtcccttaacttaatttcaagtaacagttaggtcctttatctttttttcatttcaatttggtcctttttgtccattttca 42030636  T
Q  261 tatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagatt 360  Q
    |||||| |||||||||||||||||||||||||||||| |||||||| || | ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  42030637 tatgaaattttaagcttaaaattcatgattttatttttttatggtctttcaatcttcaaatctatgatcttcgtctatgtttgcataagaatattagatt 42030736  T
Q  361 t 361  Q
    |    
T  42030737 t 42030737  T

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Target: chr2; HSP #14
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 186 - 361
Target Start/End: Original strand, 1650526 - 1650701
Alignment:
Q  186 ttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaattca 285  Q
    ||||||||||||||||||| ||| ||||||||||||||| | |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  1650526 ttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggttctttttgtccattttcatatgaatttttaagcttaaaattca 1650625  T
Q  286 tgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1650626 tgattttattttcttatggtctttcaatcttcaaatctatgatccgcgtctatgtttgcataagaatattagattt 1650701  T

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Target: chr2; HSP #15
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 163 - 361
Target Start/End: Original strand, 23926391 - 23926589
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| |||||||   ||||||||||||||||||| ||| | ||| ||||||||| | |||||| ||||||||| ||||||||||||||||||    
T  23926391 ggcaaaattacacttttagttccttaacttaatttcaggtaacagtttcgtcatttatctttttttcatttcaatttggtcatttttgtccattttcata 23926490  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||||||||||||||||||| |||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23926491 tgaatttttaagcttaaaattcatgattttatttttttatggtctttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 23926589  T

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Target: chr2; HSP #16
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 166 - 361
Target Start/End: Original strand, 9911912 - 9912110
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatat---cattttaatttggtcctttttgtccattttcata 262  Q
    ||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |   ||||| ||||||||||||||||||||||||||||    
T  9911912 aaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatcttttttttttcatttcaatttggtcctttttgtccattttcata 9912011  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||| ||||||||||||||||||||||||||||||| || | |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  9912012 tgaatttttaagtttaaaattcatgattttattttcttatggtctttcaatcttcaaatctatgattctcgtctatgtttgcataagaatattagattt 9912110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 166 - 361
Target Start/End: Original strand, 1270112 - 1270307
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||||||||||||||  ||||||||||||||  ||| ||| |||| |||||||||  | |||||| |||||| |||||||||| |||||||||||||    
T  1270112 aaaattacatttttagtcccttaacttaatttcacataacagtttggttctttatcttattttcatttcaatttgttcctttttgttcattttcatatga 1270211  T
Q  266 atttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1270212 atttttaagcttaaaattcatgattttattttcttatggtctttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 1270307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 171 - 361
Target Start/End: Original strand, 29421701 - 29421891
Alignment:
Q  171 tacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatgaatttt 270  Q
    |||| ||||||||  ||||||||||||||| ||| ||| || |||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||    
T  29421701 tacacttttagtcccttaacttaatttcagctaacagtttgatcctttatctttttttcatttcaatttggtcctttttgtccattttcatatgaatttt 29421800  T
Q  271 taagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||||||||| |||||||||| || | |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  29421801 taagcttaaaattcatgattttattctcttatggtctttcaatcttcaaatctatgatcctcgtctatgtttgcataaaaatattagattt 29421891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 164 - 361
Target Start/End: Original strand, 15461256 - 15461453
Alignment:
Q  164 gcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatat 263  Q
    ||||||||||| ||||| ||  ||||| ||||||||||||  ||| || |||||||||||| | |||||| |||||||||||||||||||||||||||||    
T  15461256 gcaaaattacacttttaatcccttaacgtaatttcaggtaccagtttgatcctttatctttttttcatttcaatttggtcctttttgtccattttcatat 15461355  T
Q  264 gaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||||||| |||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  15461356 gaatttttaagcttaaaattcataatttaattttcttatggtcttttaatcttcaaatctatgatcctcgtctatgtttgcataaaaatattagattt 15461453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 166 - 361
Target Start/End: Original strand, 11122647 - 11122842
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||| ||||||| ||| ||||||||||||||||||| ||| ||||||||||| | | | |||||| ||||||||| ||||||||||||||| |||||    
T  11122647 aaaattatatttttaatctcttaacttaatttcaggtaacagtttggtcctttatatatttttcatttcaatttggtcatttttgtccattttcgtatga 11122746  T
Q  266 atttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  11122747 atttttaagctcaaaattcatgattttattttcttatggtctttcagtcttcaaatctatgatcctcgtctatgtttgcataaaaatataagattt 11122842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 162 - 361
Target Start/End: Original strand, 29174921 - 29175122
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatat--cattttaatttggtcctttttgtccattttc 259  Q
    ||||||||||||||||||||||  ||||||||||||||||||| ||| |  | |||||||||| | |  | ||| |||||||||||||||||||||||||    
T  29174921 aggcaaaattacatttttagtcccttaacttaatttcaggtaacagtcttattctttatctttttttttcttttcaatttggtcctttttgtccattttc 29175020  T
Q  260 atatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagat 359  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||    
T  29175021 atatgaatttttaagcttaaaattcatgatattatttttttatggtctttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagat 29175120  T
Q  360 tt 361  Q
    ||    
T  29175121 tt 29175122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 160 - 361
Target Start/End: Original strand, 40657297 - 40657498
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttc 259  Q
    ||||| ||||||||| || |||||  ||||||||| ||||||||| ||| ||||||||||||||| | |||||| |||||||||||||||||||||||||    
T  40657297 aaaggaaaaattacacttatagtcccttaacttaacttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttc 40657396  T
Q  260 atatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagat 359  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||  ||||||||||| ||||||||||| ||    
T  40657397 atatgaaattttaagcttaaaattcatgattttattttcttatggtcttccagtcttcaaatctatgatccttatctatgtttgcttaagaatattatat 40657496  T
Q  360 tt 361  Q
    ||    
T  40657497 tt 40657498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 163 - 361
Target Start/End: Original strand, 3321996 - 3322191
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||| |||| ||||||| |||||| ||| ||||||||||||||| | |||||||||||||||||||||||| ||||||||||    
T  3321996 ggcaaaattacagttttagtctcttaatttaattttaggtaacagtttggtcctttatctttttttcattttaatttggtcctttttgttcattttcata 3322095  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |  |||||| ||||||||||||||||||||||||||||||| || |||||||||||||| |||||   |||||||||||||||||||||||||||||||    
T  3322096 tacatttttgagcttaaaattcatgattttattttcttatgatcttttagtcttcaaatttatga---tcgtctatgtttgcataagaatattagattt 3322191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 159 - 361
Target Start/End: Complemental strand, 13421395 - 13421190
Alignment:
Q  159 taaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatc---attttaatttggtcctttttgtccat 255  Q
    |||||||||| ||||| ||||||||  |||||||||||| |||||| ||| || |||||||||||| | |    |||| |||||||||||||||||||||    
T  13421395 taaaggcaaagttacacttttagtcccttaacttaattttaggtaacagtttgttcctttatctttttttttttatttcaatttggtcctttttgtccat 13421296  T
Q  256 tttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatatt 355  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||||| ||||||||||||||||||||    
T  13421295 ttttatatgaatttttaagcttaaaattcatgattttattttcttatgatctttcagtcttcaaatctatgatcctcgtttatgtttgcataagaatatt 13421196  T
Q  356 agattt 361  Q
    ||||||    
T  13421195 agattt 13421190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 166 - 361
Target Start/End: Complemental strand, 22899330 - 22899135
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||| ||||||||||  ||||||||||||||||||| ||| |||| |||||||||| | |||||| ||||||||| |||||||  ||||||||||||    
T  22899330 aaaattatatttttagtcccttaacttaatttcaggtaacagtttggttctttatctttttttcatttcaatttggtcatttttgtttattttcatatga 22899231  T
Q  266 atttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    | ||||||| |||||||| |||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  22899230 aattttaagtttaaaatttatgattttattttcttatggtctttcagtgttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 22899135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 160 - 361
Target Start/End: Original strand, 1479025 - 1479225
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttc 259  Q
    ||||||||||||||| |||||||   ||||||||||||||||||| | | ||||| ||||||||| | |||||| |||||| | ||||||||| ||||||    
T  1479025 aaaggcaaaattacacttttagttccttaacttaatttcaggtaataatttggtcatttatctttttttcatttcaatttgatactttttgtctattttc 1479124  T
Q  260 atatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagat 359  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  1479125 atatgaatttttaagcttaaaattcatgatttt-tttttttatggtctttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatataagat 1479223  T
Q  360 tt 361  Q
    ||    
T  1479224 tt 1479225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 166 - 361
Target Start/End: Complemental strand, 3889182 - 3888987
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||||| ||||||||  ||||||||||||||||||| ||| || |||||||| ||| | |||||| |||||||||||||||||| |||||||||| |    
T  3889182 aaaattacacttttagtcccttaacttaatttcaggtaacagtttgatcctttatttttttttcatttcaatttggtcctttttgtctattttcatataa 3889083  T
Q  266 atttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||| ||||||||||||||||||||||||| |||||| ||   ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  3889082 atttttaatcttaaaattcatgattttattttctcatggtctttcgatcttccaatctatgatcctcgtctatgtttgcataagaatattagattt 3888987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 162 - 361
Target Start/End: Complemental strand, 18449668 - 18449472
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| |||||||   |||| ||||| |||||||| ||| | ||| ||||||||| | |||||| |||||||||||||||||||||||||||    
T  18449668 aggcaaaattacacttttagtgccttaatttaatatcaggtaacagtttagtcttttatctttttttcatttcaatttggtcctttttgtccattttcat 18449569  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||| |||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||   |||||||||||||||||||||||||||||||    
T  18449568 atgaaattttaagcttaaaatttatgattttattttcttatggtctttgagtcttcaaatctatga---tcgtctatgtttgcataagaatattagattt 18449472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 155 - 361
Target Start/End: Complemental strand, 16350920 - 16350708
Alignment:
Q  155 taattaaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcatt----ttaatttggtcctttttg 250  Q
    |||||| ||||||||||| ||||||||||| ||||||||||||||||||| ||| ||||| ||| | ||||| |  ||    ||||||||||||||||||    
T  16350920 taattataggcaaaattatatttttagtcttttaacttaatttcaggtaatagtttggtcttttttatttatttatttatttttaatttggtcctttttg 16350821  T
Q  251 tccattttcatatgaattttt--aagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataa 348  Q
    |||||||||||||||||||||  |||||||||||| |||||||||||||||||||||  || | | ||||||||||||||||||||||||||||||||||    
T  16350820 tccattttcatatgaatttttttaagcttaaaatttatgattttattttcttatggtatttcaatattcaaatctatgatcctcgtctatgtttgcataa 16350721  T
Q  349 gaatattagattt 361  Q
    |||||||||||||    
T  16350720 gaatattagattt 16350708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 210 - 361
Target Start/End: Original strand, 31556794 - 31556945
Alignment:
Q  210 tggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctt 309  Q
    ||||||||||||||| | |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||    
T  31556794 tggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatataaatttttaagcttaaaattcatgattttatttacttatggtcttt 31556893  T
Q  310 tagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
     | ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  31556894 caatcttcaaatctatgatcctcgtctatgtttgcataagaatatttgattt 31556945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 165 - 361
Target Start/End: Original strand, 22485996 - 22486194
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatat-cattttaatttggtcctttttgtccattttcatat 263  Q
    |||||||||||||||||||| |||||||||||| || ||| ||| ||||||||||| ||| | | ||||| ||||| ||||||||  ||||||| |||||    
T  22485996 caaaattacatttttagtctcttaacttaattttagataacagtttggtcctttattttttttttcatttcaattttgtccttttgatccatttacatat 22486095  T
Q  264 gaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatcta-tgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  22486096 gaatttttaagcttaaaattcatgattttattttcttatagtctttgagtcttcaaatctatttatcctcgtctatgtttgcataagaatattagattt 22486194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 166 - 361
Target Start/End: Original strand, 22195927 - 22196121
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||||| ||||||||  |||||||||||| |||||| ||| ||||| |||||| || | |||||| ||||||||| |||||||||||||| ||||      
T  22195927 aaaattacagttttagtcccttaacttaattttaggtaacagtttggtcatttatcctttt-tcatttcaatttggtcatttttgtccatttttatatac 22196025  T
Q  266 atttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||| ||||||||||||||||||| ||||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  22196026 atttttaaacttaaaattcatgattttactttcttatgatcttttagtcttcaaatctatgatcatcgtctatgtttgcataagaatattagattt 22196121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 163 - 361
Target Start/End: Original strand, 10714008 - 10714206
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| |||| |||  ||||||| |||| |||||| | | | ||||||||||||| | |||||| ||||| ||||||||  ||||||| ||||    
T  10714008 ggcaaaattacacttttggtcccttaactttattttaggtaacaatttagtcctttatctttttttcatttcaattttgtccttttgatccatttacata 10714107  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  10714108 tgaattattaagcttaaaattcatgattttattttcttatggtctttcagtcttcaaatctatgatccttgtctatgtttgcataagaatattaaattt 10714206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 216 - 361
Target Start/End: Complemental strand, 11723968 - 11723822
Alignment:
Q  216 tttatctttatatcattttaattt-ggtcctttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtc 314  Q
    ||||||||| | |||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  11723968 tttatctttttttcattttaattttggtcatttttgtccatttttatatgaatttttaagcttaaaattcatgattttattttcttatggttcttcagtc 11723869  T
Q  315 ttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  11723868 ttcaaatctatgatcctcgtatatatttgcataagaatattagattt 11723822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 186 - 355
Target Start/End: Original strand, 2450111 - 2450280
Alignment:
Q  186 ttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaattca 285  Q
    ||||||| |||| |||||| ||| | ||||||||||||| | |||||||||||| ||| ||||  ||||||| |||||||||||||||||||||||||||    
T  2450111 ttaactttattttaggtaacagtttagtcctttatctttttttcattttaattttgtctttttgatccatttacatatgaatttttaagcttaaaattca 2450210  T
Q  286 tgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatatt 355  Q
    ||||||||||||||||||||| || ||| ||||||||||||||| | |||||||||||||||||||||||    
T  2450211 tgattttattttcttatggtctttcagtgttcaaatctatgatcattgtctatgtttgcataagaatatt 2450280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 228 - 361
Target Start/End: Complemental strand, 19079508 - 19079375
Alignment:
Q  228 tcattttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatga 327  Q
    |||||| || |||||| |||||||||||||||||||  ||||||| |||| ||||||||||||||||||||||||| || || |||||||||||||||||    
T  19079508 tcatttcaaattggtcttttttgtccattttcatatacatttttatgcttgaaattcatgattttattttcttatgatctttaagtcttcaaatctatga 19079409  T
Q  328 tcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||| |||||||||| |||||||||||||||||    
T  19079408 tcctcatctatgtttgtataagaatattagattt 19079375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 156 - 283
Target Start/End: Complemental strand, 10714329 - 10714202
Alignment:
Q  156 aattaaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccat 255  Q
    ||||||||||||||||||| ||||||||  ||||||||||||||||||| ||| ||||| ||||||||| | |||||| |||||||||||||||||||||    
T  10714329 aattaaaggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcatttatctttttttcatttcaatttggtcctttttgtccat 10714230  T
Q  256 tttcatatgaatttttaagcttaaaatt 283  Q
    ||||||||  ||||| |||||| |||||    
T  10714229 tttcatatacattttcaagcttcaaatt 10714202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 341311 - 341431
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| |||||||||||||||||||||||||||    
T  341311 aggcaaaattacagttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcat 341410  T
Q  262 atgaatttttaagcttaaaat 282  Q
    ||  ||||| |||||| ||||    
T  341411 atacattttcaagcttcaaat 341431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 163 - 282
Target Start/End: Complemental strand, 35412191 - 35412072
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  35412191 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcata 35412092  T
Q  263 tgaatttttaagcttaaaat 282  Q
    |  ||||| |||||| ||||    
T  35412091 tacattttcaagcttcaaat 35412072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 163 - 274
Target Start/End: Complemental strand, 38574932 - 38574821
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||||||||||||  |||||||||||||| |||| ||| ||||||||||||||| | |||||| ||||||||| ||||| ||||||||||||    
T  38574932 ggcaaaattacatttttagtcccttaacttaatttcatgtaacagtttggtcctttatctttttttcatttcaatttggtcatttttatccattttcata 38574833  T
Q  263 tgaatttttaag 274  Q
    ||||||||||||    
T  38574832 tgaatttttaag 38574821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 162 - 282
Target Start/End: Complemental strand, 31557064 - 31556942
Alignment:
Q  162 aggcaaaattaca-tttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatat-cattttaatttggtcctttttgtccattttc 259  Q
    ||||||||||||| |||||||||  ||||||||||||||||||| ||| ||||| ||||||||| | | ||||| |||||||||||||||||||||||||    
T  31557064 aggcaaaattacactttttagtcccttaacttaatttcaggtaacagtttggtcatttatcttttttttcatttcaatttggtcctttttgtccattttc 31556965  T
Q  260 atatgaatttttaagcttaaaat 282  Q
    |||||||||||||||||| ||||    
T  31556964 atatgaatttttaagcttcaaat 31556942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 160 - 282
Target Start/End: Complemental strand, 44490621 - 44490499
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttc 259  Q
    ||||||||||||||| ||||||||  ||||| ||||||||||||| ||| ||||||||||||||| | |||||| |||||||||||||||||||||||||    
T  44490621 aaaggcaaaattacacttttagtcccttaacataatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttc 44490522  T
Q  260 atatgaatttttaagcttaaaat 282  Q
    ||||  ||||| |||||| ||||    
T  44490521 atatatattttcaagcttcaaat 44490499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 164 - 361
Target Start/End: Complemental strand, 29154376 - 29154180
Alignment:
Q  164 gcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatat 263  Q
    ||||||||||| ||||||||  |||||||||||| |||||| ||| ||||| ||||||||| | |||||| ||||| ||| |||| ||| |||| |||||    
T  29154376 gcaaaattacaattttagtcccttaacttaattttaggtaacagtttggtcttttatctttttttcatttcaattttgtctttttggtctatttgcatat 29154277  T
Q  264 gaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||| |||||| ||||||||| |||||||||||||| | | || | |||| || | |||| |  || ||||||||||||||| ||||||||||||    
T  29154276 gaattttcaagcttcaaattcatggttttattttcttat-gacattaaatctttaactttatggtgttcatctatgtttgcataaaaatattagattt 29154180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 161 - 282
Target Start/End: Complemental strand, 29422008 - 29421888
Alignment:
Q  161 aaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttca 260  Q
    |||||||||||| ||||||||||  ||||||||||||||||||| ||| ||||||||||||||| | |||||| |||||||||||||||||| |||||||    
T  29422008 aaggcaaaattatatttttagtcctttaacttaatttcaggtaacagtttggtcctttatcttt-tttcatttcaatttggtcctttttgtcgattttca 29421910  T
Q  261 tatgaatttttaagcttaaaat 282  Q
    |||| ||||| |||||| ||||    
T  29421909 tatgcattttcaagcttcaaat 29421888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 166 - 262
Target Start/End: Original strand, 28788870 - 28788966
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    ||||||||| ||||||||| ||||||||||||||||||| ||| ||||||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  28788870 aaaattacacttttagtctcttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcata 28788966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 160 - 263
Target Start/End: Complemental strand, 1650820 - 1650717
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttc 259  Q
    ||||||||||||||| ||||||||  ||||||||||||||||||| ||| | ||||||||||||| | |||||| ||||||||||||||||||||||||     
T  1650820 aaaggcaaaattacacttttagtcccttaacttaatttcaggtaacagttttgtcctttatctttttttcatttcaatttggtcctttttgtccattttt 1650721  T
Q  260 atat 263  Q
    ||||    
T  1650720 atat 1650717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 11723704 - 11723825
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatc-tttatatcattttaatttggtcctttttgtccattttca 260  Q
    ||||||||||||||||||||||  ||||||| ||||||||||| ||| |||||||||||| ||| | | |||| ||||||||| ||||||||||||||||    
T  11723704 aggcaaaattacatttttagtcccttaactttatttcaggtaacagtttggtcctttatctttttttttatttcaatttggtcatttttgtccattttca 11723803  T
Q  261 tatgaatttttaagcttaaaat 282  Q
    |||  ||||| |||||| ||||    
T  11723804 tatacattttcaagcttcaaat 11723825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 162 - 263
Target Start/End: Original strand, 18449355 - 18449456
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    |||||||||||||  |||||||  |||| |||||||||||||| ||| |||||||| |||||| | |||||||||||| |||||||||||||||||||||    
T  18449355 aggcaaaattacacatttagtcccttaatttaatttcaggtaacagtttggtccttcatctttttttcattttaatttagtcctttttgtccattttcat 18449454  T
Q  262 at 263  Q
    ||    
T  18449455 at 18449456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 163 - 283
Target Start/End: Complemental strand, 2450402 - 2450282
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||||||||||||  |||| ||||||| || ||| ||| ||||||||||||||| |  ||||| ||||||||| ||||||||||||||||||    
T  2450402 ggcaaaattacatttttagtcccttaatttaattttagataacagtttggtcctttatcttttttacatttcaatttggtcttttttgtccattttcata 2450303  T
Q  263 tgaatttttaagcttaaaatt 283  Q
    |  ||||| |||||| |||||    
T  2450302 tacattttcaagcttcaaatt 2450282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 22196234 - 22196118
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||| ||||||||||| |||||||||||| |||||| ||| || |||||||| ||| | | |||||||||||||| |||||||||||||||||||      
T  22196234 aaaattatatttttagtctcttaacttaattttaggtaacagtttgatcctttattttttttttattttaatttggtcttttttgtccattttcatatac 22196135  T
Q  266 atttttaagcttaaaat 282  Q
    ||||| |||||| ||||    
T  22196134 attttcaagcttcaaat 22196118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 162 - 282
Target Start/End: Complemental strand, 42030854 - 42030734
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| ||||||||  ||| ||||||||||| ||| ||| || |||||||||||| | | |||| |||||||||||||||||||||||||||    
T  42030854 aggcaaaattacacttttagtcctttagcttaatttcagataacagtttgatcctttatctttttttaatttcaatttggtcctttttgtccattttcat 42030755  T
Q  262 atgaatttttaagcttaaaat 282  Q
    ||  |||||| ||||| ||||    
T  42030754 atacattttttagcttcaaat 42030734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 159 - 282
Target Start/End: Original strand, 30488076 - 30488199
Alignment:
Q  159 taaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccatttt 258  Q
    |||||||||||||||| ||||| ||  ||||||||||||||||||| | | || || ||||||||| | |||||| ||||||||||||||||||||||||    
T  30488076 taaaggcaaaattacacttttaatcccttaacttaatttcaggtaacaatttgatcatttatctttttttcatttcaatttggtcctttttgtccatttt 30488175  T
Q  259 catatgaatttttaagcttaaaat 282  Q
     ||||  ||||| |||||| ||||    
T  30488176 tatatacattttcaagcttcaaat 30488199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 164 - 282
Target Start/End: Original strand, 3888872 - 3888990
Alignment:
Q  164 gcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatat 263  Q
    ||||||||| ||||||||||  ||||||||||||||||||| ||| || || ||||||||| | |||||| ||||||||| |||||||||||||| ||||    
T  3888872 gcaaaattatatttttagtcccttaacttaatttcaggtaacagtttgatcttttatctttttttcatttcaatttggtcttttttgtccatttttatat 3888971  T
Q  264 gaatttttaagcttaaaat 282  Q
      ||||| |||||| ||||    
T  3888972 acattttcaagcttcaaat 3888990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 164 - 263
Target Start/End: Original strand, 13421073 - 13421174
Alignment:
Q  164 gcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatc--tttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||  ||| | ||||||||||||| || |||||||||||||||||    
T  13421073 gcaaaattacacttttagtcctttaacttaatttcaggtaatagtttggtcctttatctttttttttcattttaatttgatcatttttgtccattttcat 13421172  T
Q  262 at 263  Q
    ||    
T  13421173 at 13421174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 168 - 282
Target Start/End: Complemental strand, 29175233 - 29175119
Alignment:
Q  168 aattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatgaat 267  Q
    ||||||||||||||||  ||||||||||||||||||| ||| || || ||||||||| | |||||||||||||||| ||||||| |||||| ||||  ||    
T  29175233 aattacatttttagtcccttaacttaatttcaggtaatagtttgctcttttatctttttctcattttaatttggtcttttttgttcatttttatatatat 29175134  T
Q  268 ttttaagcttaaaat 282  Q
    ||| |||||| ||||    
T  29175133 tttcaagcttcaaat 29175119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 162 - 263
Target Start/End: Complemental strand, 12937699 - 12937598
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| ||||| ||  ||||||||||||||| ||| ||| | ||||||||||||| | |||||| |||||||||||||||||||||||| ||    
T  12937699 aggcaaaattacacttttaatcccttaacttaatttcagataatagtttagtcctttatctttttttcatttcaatttggtcctttttgtccatttttat 12937600  T
Q  262 at 263  Q
    ||    
T  12937599 at 12937598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 29154063 - 29154183
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||||||| ||||||||  ||||||||||||||| ||| | | ||||||||||||||| | | |||| ||||| |||||||| ||||||||||||    
T  29154063 aggcaaaattacacttttagtcccttaacttaatttcagttaacaatttggtcctttatctttttttaatttcaattttgtccttttggtccattttcat 29154162  T
Q  262 atgaatttttaagcttaaaat 282  Q
    ||| || || |||||| ||||    
T  29154163 atggatcttcaagcttcaaat 29154183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 164 - 263
Target Start/End: Complemental strand, 15461568 - 15461469
Alignment:
Q  164 gcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatat 263  Q
    ||||||||||| ||||||||  ||||||||||||||||||| ||| | ||| ||||||||| | |||||| ||||||||||||||| |||||||| ||||    
T  15461568 gcaaaattacacttttagtcccttaacttaatttcaggtaacagtttagtcatttatctttttttcatttcaatttggtcctttttatccatttttatat 15461469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 161 - 282
Target Start/End: Complemental strand, 9912229 - 9912107
Alignment:
Q  161 aaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtccttt-atctttatatcattttaatttggtcctttttgtccattttc 259  Q
    |||||||||||||| ||||| ||  |||||||||||| |||||| ||| || |||||| |||||| | |||||| ||||||||||||||||||||||||     
T  9912229 aaggcaaaattacacttttaatcccttaacttaattttaggtaacagtttgatccttttatctttttttcatttcaatttggtcctttttgtccattttt 9912130  T
Q  260 atatgaatttttaagcttaaaat 282  Q
    ||||  ||||| |||||| ||||    
T  9912129 atatacattttcaagcttcaaat 9912107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 160 - 282
Target Start/End: Complemental strand, 17549386 - 17549264
Alignment:
Q  160 aaaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttc 259  Q
    ||||||||||||||| ||||| ||  |||||||||||||| |||| ||| |||||||||| |||| | |||||| ||||||||| ||||| ||||||||     
T  17549386 aaaggcaaaattacacttttaatcccttaacttaatttcaagtaacagtttggtcctttacctttttttcatttcaatttggtcttttttatccattttt 17549287  T
Q  260 atatgaatttttaagcttaaaat 282  Q
    ||||  ||||| |||||| ||||    
T  17549286 atatacattttcaagcttcaaat 17549264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 165 - 282
Target Start/End: Original strand, 11724619 - 11724736
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatg 264  Q
    |||||||| ||||||| |   ||||||||||||||||||| ||| |||| |||||||||| | |||||| |||||| ||||||||||||||||| ||||     
T  11724619 caaaattatatttttaattccttaacttaatttcaggtaacagtttggtgctttatctttttttcatttcaatttgatcctttttgtccatttttatata 11724718  T
Q  265 aatttttaagcttaaaat 282  Q
     ||||| |||||| ||||    
T  11724719 cattttcaagcttcaaat 11724736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 161 - 282
Target Start/End: Complemental strand, 22486310 - 22486191
Alignment:
Q  161 aaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttca 260  Q
    ||||||||||| || ||||||||  ||||||||||||||||||| ||| | || |||||||||| | ||||||||||||||| | |||||||||||||||    
T  22486310 aaggcaaaattgcagttttagtcctttaacttaatttcaggtaacagttttgttctttatcttt-tttcattttaatttggtac-ttttgtccattttca 22486213  T
Q  261 tatgaatttttaagcttaaaat 282  Q
    |||  ||||| |||||| ||||    
T  22486212 tatacattttcaagcttcaaat 22486191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 161 - 282
Target Start/End: Complemental strand, 23926707 - 23926586
Alignment:
Q  161 aaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttca 260  Q
    |||| ||||||||| ||||| ||  ||||||||||||||||||| | | || || ||||||||| | |||||| |||||||||||||||||||||||| |    
T  23926707 aaggtaaaattacacttttaatcccttaacttaatttcaggtaacaatttgatcttttatctttttttcatttcaatttggtcctttttgtccattttta 23926608  T
Q  261 tatgaatttttaagcttaaaat 282  Q
    |||  ||||| |||||| ||||    
T  23926607 tatacattttcaagcttcaaat 23926586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 189 - 282
Target Start/End: Original strand, 38574607 - 38574700
Alignment:
Q  189 acttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaat 282  Q
    |||||||||||||||| ||| ||| | ||||||||| | ||||||||||||| ||||||||||||||||||||||  ||||| |||||| ||||    
T  38574607 acttaatttcaggtaacagtttggacttttatctttttttcattttaatttgatcctttttgtccattttcatatatattttcaagcttcaaat 38574700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 163 - 263
Target Start/End: Original strand, 19079260 - 19079359
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||| ||  |||||||||| | |||||| ||| ||||||||||| ||| | |||||| ||||||||||||||||||||||||||||    
T  19079260 ggcaaaattacacttttaatcccttaacttaatattaggtaaaagtttggtcctttattttttt-tcatttcaatttggtcctttttgtccattttcata 19079358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 282
Target Start/End: Complemental strand, 1270391 - 1270304
Alignment:
Q  195 tttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaat 282  Q
    |||||||||| ||| ||||||||||||||| | |||||| |||||||||||||||||||||||| ||||  ||||| |||||| ||||    
T  1270391 tttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccatttttatatacattttcaagcttcaaat 1270304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 290 - 361
Target Start/End: Complemental strand, 20663896 - 20663825
Alignment:
Q  290 tttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||| |||||||||||| || | |||| |||| |||||||||||||||||||||||||||||||||||||||    
T  20663896 tttaatttcttatggtctttcaatctttaaatttatgatcctcgtctatgtttgcataagaatattagattt 20663825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 162 - 249
Target Start/End: Original strand, 26499421 - 26499507
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtccttttt 249  Q
    ||||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||| ||| | |||||| |||||||||||||||    
T  26499421 aggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat-tttttttcatttcaatttggtccttttt 26499507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 263
Target Start/End: Complemental strand, 33274710 - 33274611
Alignment:
Q  164 gcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatat 263  Q
    ||||||||||| ||||||||  |||||||||||| |||||| | | ||||||||||||||  | |||||| |||||||| |||||| |||||||||||||    
T  33274710 gcaaaattacacttttagtcccttaacttaattttaggtaacaatttggtcctttatcttcttttcatttcaatttggttctttttatccattttcatat 33274611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 165 - 282
Target Start/End: Original strand, 16350589 - 16350711
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatat-----cattttaatttggtcctttttgtccattttc 259  Q
    |||||||||||||||| ||  ||||||||||||||||||| | | | ||||||||||||| | |     ||||| |||||||||||||||||||||||||    
T  16350589 caaaattacatttttaatcccttaacttaatttcaggtaacaatttagtcctttatctttcttttttttcatttcaatttggtcctttttgtccattttc 16350688  T
Q  260 atatgaatttttaagcttaaaat 282  Q
    ||||  ||||| |||||| ||||    
T  16350689 atatacattttcaagcttcaaat 16350711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 162 - 304
Target Start/End: Complemental strand, 14952015 - 14951869
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctt----tatatcattttaatttggtcctttttgtccattt 257  Q
    ||||||||||| |||||||||  |||||||| |||||| |||| | | | ||||||||| ||    | | |||||||||||| |||||||| | ||||||    
T  14952015 aggcaaaattatatttttagttcgttaacttgatttcaagtaacattttagtcctttattttattttttttcattttaattttgtccttttaggccattt 14951916  T
Q  258 tcatatgaatttttaagcttaaaattcatgattttattttcttatgg 304  Q
     |||||  ||||| ||||||||||||||||  |||||||||||||||    
T  14951915 gcatatagattttcaagcttaaaattcatgtatttattttcttatgg 14951869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 163 - 282
Target Start/End: Complemental strand, 10192399 - 10192280
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||| | ||||| ||  ||||||||||||||  ||| | | || |||||||||||| | |||||||||||| |||||||||||||||||| |||    
T  10192399 ggcaaaattatacttttaatcccttaacttaatttcaaataacaatttgatcctttatctttttttcattttaattttgtcctttttgtccatttttata 10192300  T
Q  263 tgaatttttaagcttaaaat 282  Q
    |  ||||| |||||| ||||    
T  10192299 tacattttcaagcttcaaat 10192280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 161 - 361
Target Start/End: Complemental strand, 18508775 - 18508571
Alignment:
Q  161 aaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatc----tttatatcattttaatttggtcctttttgtccatt 256  Q
    ||||| |||||||| ||||| ||  ||||||||||||||| ||| | | ||||| ||||||    ||| | |||||| |||||  || |||| || ||||    
T  18508775 aaggctaaattacacttttaatcccttaacttaatttcagctaacaatttggtcttttatccttttttttttcatttcaattttttcattttagttcatt 18508676  T
Q  257 ttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatatta 356  Q
    | ||||||| |||| |||||| ||||||||  |||||||||||||||  | |||  |||| |||||||||  | || ||||||||||||||| |||||||    
T  18508675 tacatatgatttttcaagcttcaaattcattgttttattttcttatgaccttttcatctttaaatctatggccttcatctatgtttgcataaaaatatta 18508576  T
Q  357 gattt 361  Q
     ||||    
T  18508575 aattt 18508571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 161 - 248
Target Start/End: Complemental strand, 42950825 - 42950738
Alignment:
Q  161 aaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttt 248  Q
    |||||||||||||| ||||||||  |||| |||||||||||||| ||| ||||| ||||||||| | |||||| ||||||||| ||||    
T  42950825 aaggcaaaattacacttttagtcccttaatttaatttcaggtaacagtttggtcatttatctttttttcatttcaatttggtcatttt 42950738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 282
Target Start/End: Complemental strand, 3322306 - 3322188
Alignment:
Q  164 gcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatat 263  Q
    ||||||||||| ||||||||  |||| |||||||||  ||| | | | ||| ||||||||| | | |||| |||||||||||||||||||||||||||||    
T  3322306 gcaaaattacaattttagtcacttaatttaatttcaaataacaatttagtcttttatcttttttttatttcaatttggtcctttttgtccattttcatat 3322207  T
Q  264 gaatttttaagcttaaaat 282  Q
      ||||| |||||| ||||    
T  3322206 acattttcaagcttcaaat 3322188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 224
Target Start/End: Complemental strand, 20663970 - 20663911
Alignment:
Q  165 caaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatcttt 224  Q
    |||||||||| ||||||||  ||||||||||||||||||| ||| |||||||||||||||    
T  20663970 caaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatcttt 20663911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 247
Target Start/End: Original strand, 4980637 - 4980726
Alignment:
Q  159 taaaggcaaaattacatttttagtctgttaacttaatttcaggt-aagagtgtggtcctttatctttatatcattttaatttggtccttt 247  Q
    |||||||||||||||| ||||||||  |||||||||||||| || || ||| |||| |||||||||| | |||||| |||||| ||||||    
T  4980637 taaaggcaaaattacacttttagtcccttaacttaatttcatgtaaacagtttggttctttatctttttttcatttcaatttgatccttt 4980726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 38574757 - 38574814
Alignment:
Q  302 tggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagat 359  Q
    |||||||| ||||||||||||||||||  |||||||| ||||||||||||| ||||||    
T  38574757 tggtccttcagtcttcaaatctatgattatcgtctatatttgcataagaatgttagat 38574814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 164 - 224
Target Start/End: Original strand, 29379781 - 29379841
Alignment:
Q  164 gcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatcttt 224  Q
    ||||||||||||||||||||| |||| |||||||||||||| | | | |||||||||||||    
T  29379781 gcaaaattacatttttagtctcttaatttaatttcaggtaacaatttagtcctttatcttt 29379841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 260
Target Start/End: Complemental strand, 1479330 - 1479232
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtccttta-tctttatatcattttaatttggtcctttttgtccattttca 260  Q
    |||||||||| | ||||||||| |||||||||||| |||||| |   |||| ||||| | ||| | |||||| ||||||||||||||||| ||||||||    
T  1479330 ggcaaaattatacttttagtctcttaacttaattttaggtaacaccttggttctttattttttttttcatttcaatttggtcctttttgttcattttca 1479232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 204
Target Start/End: Original strand, 14951704 - 14951742
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaa 204  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  14951704 aaaattacatttttagtctcttaacttaatttcaggtaa 14951742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 316 - 361
Target Start/End: Complemental strand, 38574742 - 38574697
Alignment:
Q  316 tcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||||  |||||||| ||||||||||||||||||||||    
T  38574742 tcaaatctatgattatcgtctatatttgcataagaatattagattt 38574697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 252 - 303
Target Start/End: Complemental strand, 2415550 - 2415499
Alignment:
Q  252 ccattttcatatgaatttttaagcttaaaattcatgattttattttcttatg 303  Q
    |||||| ||||| |||||| |||||||||||||||  |||||||||||||||    
T  2415550 ccatttgcatataaattttcaagcttaaaattcatatttttattttcttatg 2415499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 199 - 282
Target Start/End: Original strand, 22899055 - 22899138
Alignment:
Q  199 aggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaat 282  Q
    |||||| ||| |||||||||||| || | |||||||||||||||  ||||||| |||||| ||||  ||||| |||||| ||||    
T  22899055 aggtaacagtttggtcctttatccttttttcattttaatttggttttttttgttcatttttatatatattttcaagcttcaaat 22899138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 282
Target Start/End: Complemental strand, 40657542 - 40657495
Alignment:
Q  235 aatttggtcctttttgtccattttcatatgaatttttaagcttaaaat 282  Q
    |||||||||||||||||||||||||||||  ||||| |||||| ||||    
T  40657542 aatttggtcctttttgtccattttcatatacattttcaagcttcaaat 40657495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 196
Target Start/End: Original strand, 20663756 - 20663790
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatt 196  Q
    ||||||||||||||||||||||| |||||||||||    
T  20663756 aggcaaaattacatttttagtctcttaacttaatt 20663790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 223
Target Start/End: Original strand, 16403693 - 16403750
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctt 223  Q
    |||||||||| |||| ||  ||||||||||||||||||| ||| |||||||| |||||    
T  16403693 aaaattacatgtttaatcccttaacttaatttcaggtaatagtttggtccttcatctt 16403750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 263
Target Start/End: Complemental strand, 11122922 - 11122858
Alignment:
Q  200 ggtaagagtgtggtcctttatctttatat-cattttaatttggtcctttttgtccattttcatat 263  Q
    ||||| ||| ||||||||||||||| | | ||||| |||||||| ||||||||||||||| ||||    
T  11122922 ggtaacagtttggtcctttatcttttttttcatttcaatttggttctttttgtccatttttatat 11122858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 299
Target Start/End: Original strand, 30842139 - 30842203
Alignment:
Q  235 aatttggtcctttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttct 299  Q
    ||||| ||| |||| || ||||| |||||||||||| |||||| ||||||||  |||||||||||    
T  30842139 aattttgtctttttggttcatttacatatgaattttcaagcttcaaattcatagttttattttct 30842203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 147; Significance: 2e-77; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 163 - 361
Target Start/End: Original strand, 258755 - 258953
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||| | ||||| ||  ||||||||||||||||||| ||| |||||| |||||||| | |||||| ||||||||||||||||||||||||||||    
T  258755 ggcaaaattatacttttaatcccttaacttaatttcaggtaacagtttggtccattatctttttttcatttcaatttggtcctttttgtccattttcata 258854  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  258855 tgaatttttaagcttaaaattcatgattttattttcttatggttcttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 258953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 163 - 282
Target Start/End: Complemental strand, 259069 - 258950
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| || |||||  ||||||||||||||  ||| ||| ||||||||||||||| | |||||| |||||||| |||||||||||||||||||    
T  259069 ggcaaaattacacttctagtcctttaacttaatttcatataatagtttggtcctttatctttttttcatttcaatttggttctttttgtccattttcata 258970  T
Q  263 tgaatttttaagcttaaaat 282  Q
    |  ||||| |||||| ||||    
T  258969 tatattttcaagcttcaaat 258950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 139; Significance: 1e-72; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 163 - 361
Target Start/End: Original strand, 73373 - 73571
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||| ||||||||||  ||||||||||||||||| | ||||||||||||||||||| | |||||| ||||||||| ||||||||||||||||||    
T  73373 ggcaaaattatatttttagtcatttaacttaatttcaggttacagtgtggtcctttatctttttttcatttcaatttggtcttttttgtccattttcata 73472  T
Q  263 tgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    |||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||| |||||||||| ||||||||||||||| ||||||||||||    
T  73473 tgaatttttaagcttaaaattcatgattttattttcttatagtctttcagtcttcaaatatatgatcctcttctatgtttgcataataatattagattt 73571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 163 - 282
Target Start/End: Complemental strand, 73687 - 73568
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||  |||||||||| |||||||| ||| ||||||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  73687 ggcaaaattacacttttagtcccttaacttaatatcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcata 73588  T
Q  263 tgaatttttaagcttaaaat 282  Q
    |  ||||| |||||| ||||    
T  73587 tacattttcaagcttcaaat 73568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 132; Significance: 2e-68; HSPs: 3)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 166 - 361
Target Start/End: Complemental strand, 41590 - 41395
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||||||||||||||  ||||||||||||||  ||| ||| |||| |||||||||  | |||||| |||||| |||||||||| |||||||||||||    
T  41590 aaaattacatttttagtcccttaacttaatttcacataacagtttggttctttatcttattttcatttcaatttgttcctttttgttcattttcatatga 41491  T
Q  266 atttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  41490 atttttaagcttaaaattcatgattttattttcttatggtctttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 41395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 30846 - 30914
Alignment:
Q  195 tttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatat 263  Q
    |||||||||| ||| ||||||||||||||| | |||||| |||||||||||||||||||||||| ||||    
T  30846 tttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccatttttatat 30914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 282
Target Start/End: Original strand, 41326 - 41398
Alignment:
Q  210 tggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaat 282  Q
    ||||||||||||||| | |||||| |||||||||||||||||||||||| ||||  ||||| |||||| ||||    
T  41326 tggtcctttatctttttttcatttcaatttggtcctttttgtccatttttatatacattttcaagcttcaaat 41398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 117; Significance: 2e-59; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 162 - 361
Target Start/End: Original strand, 107851 - 108054
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatat-----cattttaatttggtcctttttgtccatt 256  Q
    ||||||||||||| ||||| ||  ||||||||||||||||||| ||| ||||||||||||||| | |     ||||| ||||||||||||||||||||||    
T  107851 aggcaaaattacacttttaatcccttaacttaatttcaggtaacagtttggtcctttatcttttttttttttcatttcaatttggtcctttttgtccatt 107950  T
Q  257 ttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatatta 356  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||  || | ||||| |||||||||| |||||||||||||||||||||||||||    
T  107951 ttcatatgaatttttaagcttaaa-ttcatgattttattttcttatggtttttcaatcttcgaatctatgattctcgtctatgtttgcataagaatatta 108049  T
Q  357 gattt 361  Q
    |||||    
T  108050 gattt 108054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 163 - 263
Target Start/End: Complemental strand, 108170 - 108070
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||||||| ||||  ||||||||||||||||||  ||| ||||||||||| ||| | |||||| ||||||||||||||| |||||||| |||    
T  108170 ggcaaaattacattttcagtcccttaacttaatttcaggtatcagtttggtcctttatttttttttcatttcaatttggtcctttttatccatttttata 108071  T
Q  263 t 263  Q
    |    
T  108070 t 108070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 113; Significance: 4e-57; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 161 - 361
Target Start/End: Complemental strand, 10235 - 10035
Alignment:
Q  161 aaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttca 260  Q
    |||||||||||| | ||||| ||  ||||||||||||||| ||| | | ||||||||||||||| | |||||| ||||||||  ||||||||||||||||    
T  10235 aaggcaaaattatacttttaatcccttaacttaatttcagataacaatttggtcctttatctttttgtcatttcaatttggtgttttttgtccattttca 10136  T
Q  261 tatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagatt 360  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| || | |||||||||||||||| || ||||||||||| ||||||||| ||||||    
T  10135 tatgaatttttaagtttaaaattcatgattttattttcttatggtctttcaatcttcaaatctatgatacttgtctatgtttgtataagaatactagatt 10036  T
Q  361 t 361  Q
    |    
T  10035 t 10035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 282
Target Start/End: Original strand, 9921 - 10038
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||| | |||||||||||| ||||||  || |||| ||| |||||| | |||||| ||||||||||||||| |||||||| |||    
T  9921 ggcaaaattacacttttagtttcttaacttaattttaggtaatggtttggtactt-atcttttt-tcatttcaatttggtcctttttatccatttttata 10018  T
Q  263 tgaatttttaagcttaaaat 282  Q
    |  ||||| |||||| ||||    
T  10019 tatattttcaagcttcaaat 10038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 162 - 359
Target Start/End: Original strand, 44869 - 45065
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcat 261  Q
    |||||||||| || ||||| ||  ||||||||||||||| ||| ||| |||||||||||||||   |||||| |||||||||||||||||||||||||||    
T  44869 aggcaaaattgcacttttaatcccttaacttaatttcagataacagtttggtcctttatcttttcttcatttcaatttggtcctttttgtccattttcat 44968  T
Q  262 atgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagat 359  Q
    ||||||||||||  ||||||||||| ||||| ||||||||||||| || | |||||||||||| ||||||||||||| ||||||||||||||||||||    
T  44969 atgaatttttaaatttaaaattcataatttttttttcttatggtctttcaatcttcaaatctacgatcctcgtctat-tttgcataagaatattagat 45065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 108; Significance: 4e-54; HSPs: 2)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 230 - 361
Target Start/End: Complemental strand, 4609 - 4478
Alignment:
Q  230 attttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatc 329  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||| |||||||    
T  4609 atttcaatttgttcctttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttatggtctttcaatcttcaaatttatgatc 4510  T
Q  330 ctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||||||||||||||||    
T  4509 ctcgtctatgtttgcataagaatattagattt 4478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 4361 - 4481
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatat----cattttaatttggtcctttttgtccattttcat 261  Q
    ||||||||| |||||||   |||||||||||||| |||| ||| | ||||||||||||| | |    ||||| |||||||||||||||||||||||| ||    
T  4361 aaaattacacttttagttccttaacttaatttcaagtaatagttttgtcctttatctttttttttttcatttcaatttggtcctttttgtccatttttat 4460  T
Q  262 atgaatttttaagcttaaaat 282  Q
    ||  |||||||||||| ||||    
T  4461 atacatttttaagcttcaaat 4481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 108; Significance: 4e-54; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 166 - 361
Target Start/End: Original strand, 257695 - 257890
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||||| ||||| ||  || |||||||||||||||| | | | ||||||||||||| | | |||| |||||| |  || ||||||||||||||||||    
T  257695 aaaattacacttttaatccattgacttaatttcaggtaacaatttcgtcctttatcttttttttatttcaatttgatttttgttgtccattttcatatga 257794  T
Q  266 atttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
    ||||||||||||||||||||| ||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  257795 atttttaagcttaaaattcataattttattttcttatggtctttcagtcttcaaatcaatgatcctcgtctatgtttgcataagaatataagattt 257890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 282
Target Start/End: Complemental strand, 258003 - 257887
Alignment:
Q  162 aggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtccttta-tctttatatcattttaatttggtcctttttgtccattttca 260  Q
    ||||||||||||| ||||||||  ||||||||||     |||| | | |||||||||| ||||| | |||||| ||||||||| ||||||||||||||||    
T  258003 aggcaaaattacacttttagtcccttaacttaat-----gtaataatttggtcctttaatctttttttcatttcaatttggtcttttttgtccattttca 257909  T
Q  261 tatgaatttttaagcttaaaat 282  Q
    | |  ||||| |||||| ||||    
T  257908 tttatattttcaagcttcaaat 257887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0592 (Bit Score: 96; Significance: 5e-47; HSPs: 2)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 210 - 361
Target Start/End: Original strand, 8435 - 8586
Alignment:
Q  210 tggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctt 309  Q
    ||||||||||| ||| | |||||| ||||||||||||||||||||||||||||| || ||||||  ||||||||||||||||||||||||||||||| ||    
T  8435 tggtcctttatttttttttcatttcaatttggtcctttttgtccattttcatataaaattttaaaattaaaattcatgattttattttcttatggtcttt 8534  T
Q  310 tagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 361  Q
     | ||||||||||||||||||  || ||||||||||||||||||||||||||    
T  8535 caatcttcaaatctatgatccctgtttatgtttgcataagaatattagattt 8586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0592; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 163 - 282
Target Start/End: Complemental strand, 8702 - 8583
Alignment:
Q  163 ggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcata 262  Q
    |||||||||||| ||||||||| ||||||||||||||||||| ||| ||||||||||||||| | |||||| ||||||||||||||| |||||||| |||    
T  8702 ggcaaaattacacttttagtcttttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttatccatttttata 8603  T
Q  263 tgaatttttaagcttaaaat 282  Q
    |  ||||| |||||| ||||    
T  8602 tacattttcaagcttcaaat 8583  T

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Target: scaffold0003 (Bit Score: 91; Significance: 5e-44; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 161 - 361
Target Start/End: Original strand, 323420 - 323611
Alignment:
Q  161 aaggcaaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatat-----cattttaatttggtcctttttgtccat 255  Q
    |||||||||||||| ||||||||| ||||||||||||||||||| ||| | ||||||||||||| | |     ||||| ||||||||| |||||||||||    
T  323420 aaggcaaaattacacttttagtctcttaacttaatttcaggtaacagttttgtcctttatcttttttttttttcatttcaatttggtcttttttgtccat 323519  T
Q  256 tttcatatgaatttttaagcttaaaattcatgattttattttcttatggtcctttagtcttcaaatctatgatcctcgtctatgtttgcataagaatatt 355  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||              |||||||||||||||||||||||||||||    
T  323520 tttcatatgaaattttaagcttaaaattcatgattttattttcttatggtctttcag--------------atcctcgtctatgtttgcataagaatatt 323605  T

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Target: scaffold0003; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 323723 - 323608
Alignment:
Q  166 aaaattacatttttagtctgttaacttaatttcaggtaagagtgtggtcctttatctttatatcattttaatttggtcctttttgtccattttcatatga 265  Q
    ||||||| ||||||||||  ||||||||||||||||||| ||| ||||||||||||||| | ||||||||||||| || |||||||||||||||||||      
T  323723 aaaattatatttttagtcccttaacttaatttcaggtaacagtttggtcctttatcttt-tttcattttaatttgatcttttttgtccattttcatatac 323625  T
Q  266 atttttaagcttaaaat 282  Q
    ||||| |||||| ||||    
T  323624 attttcaagcttcaaat 323608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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