View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7380_high_29 (Length: 330)

Name: NF7380_high_29
Description: NF7380
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7380_high_29
NF7380_high_29
[»] chr8 (29 HSPs)
chr8 (18-330)||(40902444-40902756)
chr8 (27-214)||(30149497-30149676)
chr8 (269-330)||(20760711-20760772)
chr8 (269-330)||(10989292-10989353)
chr8 (269-330)||(15011080-15011141)
chr8 (267-330)||(5720918-5720981)
chr8 (268-330)||(43599302-43599364)
chr8 (269-330)||(8559573-8559634)
chr8 (270-330)||(42228764-42228824)
chr8 (271-330)||(35561660-35561719)
chr8 (269-330)||(15010872-15010934)
chr8 (269-326)||(8559733-8559790)
chr8 (269-330)||(10989085-10989146)
chr8 (269-326)||(33435875-33435932)
chr8 (269-330)||(45122303-45122364)
chr8 (269-330)||(4196001-4196063)
chr8 (269-330)||(30176515-30176576)
chr8 (269-326)||(43901072-43901129)
chr8 (269-329)||(8559851-8559910)
chr8 (269-330)||(15856965-15857026)
chr8 (269-317)||(15857171-15857219)
chr8 (274-330)||(30117487-30117543)
chr8 (285-330)||(3538026-3538071)
chr8 (269-330)||(16454686-16454747)
chr8 (269-326)||(18313776-18313833)
chr8 (269-326)||(25186764-25186821)
chr8 (269-326)||(33435671-33435728)
chr8 (269-302)||(43599510-43599543)
chr8 (270-330)||(37537146-37537206)
[»] chr3 (54 HSPs)
chr3 (269-330)||(5440569-5440630)
chr3 (269-330)||(4191173-4191234)
chr3 (269-330)||(50692315-50692376)
chr3 (266-330)||(39078822-39078886)
chr3 (268-330)||(22339732-22339794)
chr3 (269-330)||(50692518-50692579)
chr3 (269-329)||(54591517-54591577)
chr3 (271-330)||(49477528-49477587)
chr3 (269-330)||(9264137-9264198)
chr3 (269-330)||(9264344-9264405)
chr3 (269-330)||(9264551-9264612)
chr3 (269-330)||(37058822-37058883)
chr3 (269-330)||(54495523-54495584)
chr3 (267-330)||(22407699-22407762)
chr3 (277-328)||(26366731-26366782)
chr3 (268-330)||(51338492-51338554)
chr3 (268-330)||(53640223-53640285)
chr3 (269-330)||(37223567-37223628)
chr3 (269-330)||(40230485-40230546)
chr3 (269-327)||(21832745-21832803)
chr3 (276-330)||(34992576-34992630)
chr3 (276-330)||(34992868-34992922)
chr3 (276-330)||(39956725-39956779)
chr3 (269-330)||(51642686-51642748)
chr3 (269-330)||(4029695-4029756)
chr3 (269-330)||(21833516-21833577)
chr3 (269-330)||(33798850-33798911)
chr3 (269-330)||(39956518-39956579)
chr3 (269-330)||(40230690-40230751)
chr3 (269-330)||(42258902-42258963)
chr3 (269-328)||(25627974-25628033)
chr3 (268-326)||(40926445-40926503)
chr3 (268-330)||(47702475-47702537)
chr3 (272-330)||(53761449-53761507)
chr3 (269-330)||(21832250-21832311)
chr3 (269-330)||(22407492-22407553)
chr3 (269-314)||(29369793-29369838)
chr3 (269-330)||(35011856-35011917)
chr3 (269-330)||(35015477-35015538)
chr3 (268-317)||(48308521-48308570)
chr3 (269-330)||(51642479-51642540)
chr3 (269-330)||(53640016-53640077)
chr3 (269-321)||(1353399-1353451)
chr3 (290-330)||(50203908-50203948)
chr3 (269-328)||(10758821-10758880)
chr3 (296-330)||(5440631-5440665)
chr3 (276-330)||(19820579-19820632)
chr3 (269-326)||(25578736-25578792)
chr3 (289-330)||(29763747-29763788)
chr3 (269-326)||(32034083-32034140)
chr3 (269-326)||(38421977-38422034)
chr3 (273-326)||(40927026-40927079)
chr3 (269-322)||(44145453-44145506)
chr3 (289-330)||(54369051-54369092)
[»] chr5 (48 HSPs)
chr5 (267-330)||(43490514-43490577)
chr5 (269-330)||(48155-48216)
chr5 (269-330)||(28358086-28358147)
chr5 (269-330)||(34457295-34457356)
chr5 (269-330)||(2908613-2908674)
chr5 (269-330)||(38376723-38376784)
chr5 (269-330)||(43490307-43490368)
chr5 (269-328)||(5127966-5128025)
chr5 (269-330)||(3762898-3762959)
chr5 (269-330)||(11632423-11632484)
chr5 (269-328)||(18914214-18914273)
chr5 (269-328)||(18914421-18914480)
chr5 (269-328)||(39268010-39268069)
chr5 (276-330)||(34457095-34457149)
chr5 (269-330)||(13413576-13413637)
chr5 (269-330)||(24125054-24125115)
chr5 (277-330)||(35527039-35527092)
chr5 (268-328)||(15510708-15510768)
chr5 (274-330)||(30870936-30870992)
chr5 (269-328)||(39268218-39268277)
chr5 (269-327)||(18107532-18107590)
chr5 (269-330)||(2908820-2908881)
chr5 (269-330)||(28156231-28156291)
chr5 (269-326)||(29008064-29008121)
chr5 (269-330)||(37781895-37781956)
chr5 (275-323)||(35527199-35527247)
chr5 (275-330)||(40169092-40169147)
chr5 (269-330)||(48362-48421)
chr5 (269-330)||(35527325-35527387)
chr5 (268-321)||(15286844-15286897)
chr5 (289-330)||(15510555-15510596)
chr5 (269-306)||(28156028-28156065)
chr5 (271-328)||(32501205-32501262)
chr5 (269-330)||(36307974-36308034)
chr5 (269-330)||(37656783-37656844)
chr5 (268-328)||(36878317-36878377)
chr5 (271-330)||(3015672-3015731)
chr5 (269-303)||(17130062-17130096)
chr5 (269-330)||(3015468-3015529)
chr5 (269-330)||(10668352-10668413)
chr5 (269-302)||(13413782-13413815)
chr5 (269-318)||(15287045-15287094)
chr5 (277-330)||(17135519-17135572)
chr5 (269-330)||(18107825-18107886)
chr5 (269-326)||(21019925-21019982)
chr5 (289-330)||(22196604-22196645)
chr5 (289-330)||(38131776-38131817)
chr5 (270-326)||(18873249-18873305)
[»] chr6 (27 HSPs)
chr6 (268-330)||(16877061-16877123)
chr6 (269-330)||(15101162-15101223)
chr6 (269-330)||(16590176-16590237)
chr6 (269-330)||(16605143-16605204)
chr6 (269-329)||(6623477-6623537)
chr6 (269-330)||(11313433-11313494)
chr6 (267-330)||(11316833-11316896)
chr6 (267-330)||(28149783-28149846)
chr6 (269-327)||(19712458-19712516)
chr6 (268-330)||(25998808-25998870)
chr6 (268-330)||(26098333-26098395)
chr6 (269-330)||(18494325-18494386)
chr6 (269-330)||(24558575-24558636)
chr6 (269-326)||(26394543-26394600)
chr6 (272-329)||(30539415-30539472)
chr6 (275-330)||(16876881-16876936)
chr6 (269-330)||(11317040-11317101)
chr6 (269-330)||(25999015-25999076)
chr6 (290-330)||(5269324-5269364)
chr6 (269-330)||(15102676-15102737)
chr6 (269-330)||(15102803-15102863)
chr6 (289-330)||(19054505-19054546)
chr6 (266-323)||(19291976-19292033)
chr6 (269-330)||(24558780-24558841)
chr6 (269-330)||(26098746-26098807)
chr6 (289-330)||(26339893-26339934)
chr6 (289-329)||(30539247-30539287)
[»] chr1 (42 HSPs)
chr1 (267-329)||(29273277-29273339)
chr1 (269-330)||(39649135-39649196)
chr1 (268-330)||(52846900-52846962)
chr1 (269-330)||(15392017-15392078)
chr1 (277-330)||(43361603-43361656)
chr1 (277-330)||(43361808-43361861)
chr1 (268-330)||(9380891-9380953)
chr1 (268-330)||(48558372-48558434)
chr1 (269-330)||(11590412-11590473)
chr1 (269-330)||(12314570-12314631)
chr1 (269-330)||(39648929-39648989)
chr1 (269-329)||(29265910-29265970)
chr1 (268-330)||(25799111-25799173)
chr1 (268-330)||(38871206-38871268)
chr1 (269-330)||(2997107-2997168)
chr1 (269-330)||(13959394-13959455)
chr1 (268-319)||(39648826-39648877)
chr1 (269-319)||(24382213-24382263)
chr1 (269-327)||(45395544-45395602)
chr1 (269-330)||(1233918-1233979)
chr1 (269-330)||(2997312-2997373)
chr1 (269-330)||(29413340-29413401)
chr1 (269-330)||(42845072-42845133)
chr1 (269-325)||(5222686-5222742)
chr1 (286-330)||(15391828-15391872)
chr1 (269-328)||(24382621-24382680)
chr1 (271-330)||(29413136-29413195)
chr1 (267-330)||(33342329-33342391)
chr1 (276-330)||(15391747-15391801)
chr1 (276-326)||(22826800-22826850)
chr1 (271-329)||(49828665-49828723)
chr1 (289-330)||(2697382-2697423)
chr1 (289-330)||(4022176-4022217)
chr1 (289-330)||(9381111-9381152)
chr1 (289-330)||(9381315-9381356)
chr1 (281-330)||(10017379-10017428)
chr1 (269-330)||(11018846-11018907)
chr1 (269-330)||(21538985-21539046)
chr1 (289-330)||(40521544-40521585)
chr1 (289-330)||(43423291-43423332)
chr1 (269-330)||(46098675-46098736)
chr1 (269-302)||(52921546-52921579)
[»] chr7 (37 HSPs)
chr7 (269-330)||(9378992-9379053)
chr7 (269-330)||(39808648-39808709)
chr7 (269-330)||(6782818-6782879)
chr7 (269-330)||(6783030-6783091)
chr7 (269-330)||(9378785-9378846)
chr7 (269-330)||(29252568-29252629)
chr7 (269-328)||(16565090-16565149)
chr7 (269-328)||(16600513-16600572)
chr7 (267-326)||(35866694-35866753)
chr7 (269-318)||(6214298-6214347)
chr7 (269-330)||(48113989-48114050)
chr7 (268-328)||(16564885-16564945)
chr7 (268-328)||(16600717-16600777)
chr7 (269-326)||(23390582-23390639)
chr7 (269-330)||(23396601-23396662)
chr7 (269-326)||(31357730-31357787)
chr7 (269-330)||(33855683-33855744)
chr7 (269-325)||(4258056-4258112)
chr7 (269-324)||(4258261-4258316)
chr7 (269-330)||(2179646-2179708)
chr7 (268-330)||(33855472-33855534)
chr7 (292-330)||(39808515-39808553)
chr7 (268-330)||(47856042-47856103)
chr7 (269-326)||(10903332-10903389)
chr7 (269-326)||(10903539-10903596)
chr7 (269-326)||(33833942-33833999)
chr7 (275-330)||(31374763-31374818)
chr7 (276-330)||(8681883-8681937)
chr7 (268-330)||(40137747-40137809)
chr7 (289-330)||(1661242-1661283)
chr7 (269-326)||(5266351-5266408)
chr7 (269-330)||(6751556-6751617)
chr7 (269-302)||(6751788-6751821)
chr7 (269-330)||(21557008-21557069)
chr7 (269-330)||(23821727-23821788)
chr7 (269-326)||(33834147-33834204)
chr7 (290-330)||(7135294-7135334)
[»] chr4 (43 HSPs)
chr4 (269-330)||(12016734-12016795)
chr4 (269-330)||(12016942-12017003)
chr4 (269-330)||(21498523-21498584)
chr4 (269-330)||(25753656-25753717)
chr4 (269-330)||(43943665-43943726)
chr4 (269-330)||(54210369-54210430)
chr4 (266-330)||(5488356-5488420)
chr4 (269-330)||(28497265-28497326)
chr4 (269-330)||(1923042-1923103)
chr4 (269-330)||(27634377-27634438)
chr4 (269-330)||(29113441-29113502)
chr4 (269-330)||(39110899-39110960)
chr4 (269-330)||(49380931-49380992)
chr4 (274-329)||(50307273-50307328)
chr4 (269-330)||(28245985-28246046)
chr4 (269-329)||(53559357-53559417)
chr4 (269-328)||(33629651-33629710)
chr4 (268-330)||(23350790-23350852)
chr4 (269-327)||(26806503-26806561)
chr4 (269-326)||(8560026-8560083)
chr4 (269-330)||(17076991-17077052)
chr4 (269-330)||(17077195-17077256)
chr4 (269-330)||(28395170-28395230)
chr4 (269-326)||(47491901-47491958)
chr4 (269-330)||(56511289-56511350)
chr4 (269-330)||(56511496-56511557)
chr4 (270-330)||(3055776-3055836)
chr4 (286-330)||(49544341-49544385)
chr4 (268-302)||(33629595-33629629)
chr4 (289-330)||(990559-990600)
chr4 (269-326)||(3640198-3640255)
chr4 (269-330)||(5066051-5066112)
chr4 (269-302)||(11786857-11786890)
chr4 (269-302)||(11799024-11799057)
chr4 (269-330)||(22865762-22865822)
chr4 (269-302)||(28245783-28245816)
chr4 (269-302)||(33629855-33629888)
chr4 (269-330)||(33797160-33797221)
chr4 (269-326)||(45684229-45684286)
chr4 (289-330)||(51469493-51469534)
chr4 (269-330)||(53863897-53863958)
chr4 (290-330)||(4645865-4645905)
chr4 (290-330)||(23018483-23018523)
[»] chr2 (41 HSPs)
chr2 (269-330)||(19859917-19859978)
chr2 (269-330)||(19860029-19860090)
chr2 (269-330)||(20999040-20999101)
chr2 (269-330)||(883652-883713)
chr2 (265-330)||(6986467-6986532)
chr2 (269-330)||(12419830-12419891)
chr2 (269-330)||(12431890-12431951)
chr2 (269-330)||(16006969-16007030)
chr2 (269-330)||(17727396-17727457)
chr2 (269-330)||(34775349-34775410)
chr2 (269-330)||(29695390-29695451)
chr2 (266-330)||(13839310-13839374)
chr2 (274-329)||(883847-883902)
chr2 (269-330)||(884049-884110)
chr2 (269-330)||(25621336-25621397)
chr2 (269-330)||(29684003-29684064)
chr2 (269-330)||(33986026-33986087)
chr2 (269-329)||(10570927-10570987)
chr2 (269-330)||(12432097-12432158)
chr2 (269-330)||(18607304-18607365)
chr2 (269-330)||(21734408-21734469)
chr2 (269-330)||(27545167-27545228)
chr2 (269-330)||(29684211-29684272)
chr2 (269-326)||(31761124-31761181)
chr2 (269-326)||(39386662-39386719)
chr2 (276-328)||(29101749-29101801)
chr2 (269-321)||(33985829-33985881)
chr2 (271-330)||(1218931-1218990)
chr2 (269-328)||(8044599-8044658)
chr2 (269-320)||(40009966-40010017)
chr2 (269-326)||(3435541-3435598)
chr2 (269-330)||(7257659-7257720)
chr2 (269-330)||(15518659-15518720)
chr2 (269-326)||(32667175-32667232)
chr2 (274-330)||(26847293-26847349)
chr2 (269-330)||(14127238-14127299)
chr2 (289-330)||(18901915-18901956)
chr2 (269-326)||(29676286-29676343)
chr2 (269-326)||(32666969-32667026)
chr2 (274-326)||(4721859-4721911)
chr2 (290-330)||(43688472-43688512)
[»] scaffold0989 (1 HSPs)
scaffold0989 (270-330)||(2998-3058)
[»] scaffold0434 (2 HSPs)
scaffold0434 (269-330)||(13505-13566)
scaffold0434 (267-330)||(13296-13359)
[»] scaffold0054 (1 HSPs)
scaffold0054 (269-330)||(21314-21376)
[»] scaffold0029 (1 HSPs)
scaffold0029 (268-330)||(76842-76905)
[»] scaffold0060 (1 HSPs)
scaffold0060 (270-330)||(59518-59575)
[»] scaffold1138 (1 HSPs)
scaffold1138 (276-326)||(1928-1978)


Alignment Details
Target: chr8 (Bit Score: 301; Significance: 1e-169; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 18 - 330
Target Start/End: Complemental strand, 40902756 - 40902444
Alignment:
Q  18 agttcaacagcaggctgattttcttcatggttcagatttggactccaactccatttccagttctgcacaccatcggatgcagacagtttctgtgctacta 117  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40902756 agttcaacagcaggctgattttcttcatggttcagatttcgactccaactccatttccagttctgcacaccatcggatgcagacagtttctgtgctacta 40902657  T
Q  118 tgaattgcttgtcagaagctaaactgaacgggtatggaaattgatgacagattggctgatccacttgccataactccttctagaataacgtgttttcacc 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  40902656 tgaattgcttgtcagaagctaaactgaacgggtatggaaattgatgacagattggctgatccacttgccataactccttctagaataacgcgttttcacc 40902557  T
Q  218 gtttccgatctcttttccaacaactttcgcgaaccagtttgtgtcagcatctattgggaaaaacccaagttccacatcggatagacaaggctcttgagaa 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  40902556 gtttccgatctcttttccaacaactttcgcgaaccagtttgtgtcagcatctattgggaaaaacccaagttccacatcggatagacaagactcttgagaa 40902457  T
Q  318 gagtttataaaga 330  Q
    |||||||||||||    
T  40902456 gagtttataaaga 40902444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 27 - 214
Target Start/End: Complemental strand, 30149676 - 30149497
Alignment:
Q  27 gcaggctgattttcttcatggttcagatttggactccaactccatttccagttctgcacaccatcggatgcagacagtttctgtgctactatgaattgct 126  Q
    |||||| |||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||   || ||||||||||||||||| |||||| ||    
T  30149676 gcaggcagattttgttcatggttcagatttcgactccaacttcatttccagttctgcacaccatcggtctcatacagtttctgtgctactgtgaattcct 30149577  T
Q  127 tgtcagaagctaaactgaacgggtatggaaattgatgacagattggctgatccacttgccataactccttctagaataacgtgttttc 214  Q
    ||||||||||||||| |||| ||| |||||||||        ||||||||| | ||||||||||||||||| ||||||| ||||||||    
T  30149576 tgtcagaagctaaacagaacaggtttggaaattg--------ttggctgattcccttgccataactccttccagaataatgtgttttc 30149497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 20760772 - 20760711
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  20760772 tattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaaga 20760711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 10989353 - 10989292
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  10989353 tattggaaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaaga 10989292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 15011141 - 15011080
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  15011141 tattggaaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaaga 15011080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 267 - 330
Target Start/End: Complemental strand, 5720981 - 5720918
Alignment:
Q  267 tctattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||| |||||| |||||||||||||| ||| |||||||||||||||||||||||    
T  5720981 tctattgggaaaaatccaagtcccacatcggatagataagactcttgagaagagtttataaaga 5720918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 268 - 330
Target Start/End: Original strand, 43599302 - 43599364
Alignment:
Q  268 ctattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||| ||||| |||||||||||||| ||| |||||||||||||||||||||||    
T  43599302 ctattgggaaaaactcaagtcccacatcggatagataagactcttgagaagagtttataaaga 43599364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 8559573 - 8559634
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| |||||||||||||| ||| |||||||||||||| ||||||||    
T  8559573 tattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagtatataaaga 8559634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 42228764 - 42228824
Alignment:
Q  270 attgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||| | |||| |||||||||||||||||| |||||||||||||||||||||||    
T  42228764 attgggaaaaatctaagtcccacatcggatagacaagactcttgagaagagtttataaaga 42228824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 271 - 330
Target Start/End: Original strand, 35561660 - 35561719
Alignment:
Q  271 ttgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||| |||||||||||||| |||  ||||||||||||||||||||||    
T  35561660 ttgggaaaaacccaagtcccacatcggatagataagattcttgagaagagtttataaaga 35561719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 15010934 - 15010872
Alignment:
Q  269 tattgggaaaaaccc-aagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||| |||| |||||||||||||||||| |||||||||||| ||||||||||    
T  15010934 tattgggaaaaaccccaagtcccacatcggatagacaagactcttgagaagaatttataaaga 15010872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 269 - 326
Target Start/End: Complemental strand, 8559790 - 8559733
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttata 326  Q
    ||||||||||||||||||| |||||||||||||| ||| |||||||||||||| ||||    
T  8559790 tattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagtatata 8559733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 10989146 - 10989085
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||| |||||||||||| ||||||| | |||||||| |||||||||||||||||||||||    
T  10989146 tattggaaaaaacccaagtcccacatcaggtagacaagactcttgagaagagtttataaaga 10989085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 269 - 326
Target Start/End: Original strand, 33435875 - 33435932
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttata 326  Q
    ||||||||||||||||||| |||||||||||||| ||| ||||||| |||||||||||    
T  33435875 tattgggaaaaacccaagtcccacatcggatagataagactcttgataagagtttata 33435932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 45122303 - 45122364
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| ||||||| |||||| ||| |||||||||||||| ||||||||    
T  45122303 tattgggaaaaacccaagtcccacatctgatagataagactcttgagaagagtatataaaga 45122364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 4196063 - 4196001
Alignment:
Q  269 tattgggaaaaaccc-aagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||| |||  |||||||||||||||||| |||||||||||||||||| ||||    
T  4196063 tattgggaaaaaccccaaggcccacatcggatagacaagactcttgagaagagtttatcaaga 4196001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 30176576 - 30176515
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||| ||||| ||||||||||||||| || |||||||  ||||||||||||||    
T  30176576 tattgggaaaaactcaagtcccacatcggatagacgagactcttgatgagagtttataaaga 30176515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 326
Target Start/End: Complemental strand, 43901129 - 43901072
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttata 326  Q
    |||||||||||||||| || |||||||||||||| ||| ||||||| |||||||||||    
T  43901129 tattgggaaaaacccatgtcccacatcggatagataagactcttgataagagtttata 43901072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 269 - 329
Target Start/End: Complemental strand, 8559910 - 8559851
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaag 329  Q
    ||||||||||||||||||| ||||||||||||||  || |||||||||||||| |||||||    
T  8559910 tattgggaaaaacccaagtcccacatcggataga-tagactcttgagaagagtatataaag 8559851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 15856965 - 15857026
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||| |||||| || ||| ||||| ||| |||| ||||||||||||||||||    
T  15856965 tattgggaaaaacctaagttcaacgtcgaatagataagactctcgagaagagtttataaaga 15857026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 317
Target Start/End: Original strand, 15857171 - 15857219
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaa 317  Q
    ||||||||||||| ||||| |||||||||||||| ||| ||||||||||    
T  15857171 tattgggaaaaactcaagtcccacatcggatagataagactcttgagaa 15857219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 330
Target Start/End: Complemental strand, 30117543 - 30117487
Alignment:
Q  274 ggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||| ||||||||||||||  || |||||||  ||||||||||||||    
T  30117543 ggaaaaacccaagtcccacatcggatagatgagactcttgatgagagtttataaaga 30117487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 3538026 - 3538071
Alignment:
Q  285 agttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||| ||||||||||||| | | |||||||||||||||||||||||    
T  3538026 agtttcacatcggatagatatgactcttgagaagagtttataaaga 3538071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 16454747 - 16454686
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||| ||||| ||||||  ||||||||||||| ||| ||||| |||||||| ||||||||    
T  16454747 tattggaaaaaaaccaagtctcacatcggatagataagactcttaagaagagtatataaaga 16454686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 326
Target Start/End: Original strand, 18313776 - 18313833
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttata 326  Q
    |||||||||||| |||||| |||||||||||||| ||| ||||||  || ||||||||    
T  18313776 tattgggaaaaatccaagtcccacatcggatagataagactcttgttaaaagtttata 18313833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 326
Target Start/End: Original strand, 25186764 - 25186821
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttata 326  Q
    |||||| ||||||| |||| |||||||||||||| ||| ||||||| || ||||||||    
T  25186764 tattggaaaaaacctaagtcccacatcggatagataagactcttgataaaagtttata 25186821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 326
Target Start/End: Original strand, 33435671 - 33435728
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttata 326  Q
    ||||||||||||| |||||  ||||||||||||| ||  ||||||| |||||||||||    
T  33435671 tattgggaaaaactcaagtctcacatcggatagataaaactcttgataagagtttata 33435728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 302
Target Start/End: Original strand, 43599510 - 43599543
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggataga 302  Q
    ||||||||||||||||||| ||||||||||||||    
T  43599510 tattgggaaaaacccaagtcccacatcggataga 43599543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 37537206 - 37537146
Alignment:
Q  270 attgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||| ||||| |||||||| ||||| ||| || ||||||||||| | ||||||    
T  37537206 attgggaaaaactcaagtcccacatcgaatagataagacttttgagaagagtatgtaaaga 37537146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 5440569 - 5440630
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5440569 tattgggaaaaacccaagttccacatcggatagacaagactcttgagaagagtttataaaga 5440630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 4191234 - 4191173
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  4191234 tattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaaga 4191173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 50692315 - 50692376
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  50692315 tattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaaga 50692376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 266 - 330
Target Start/End: Complemental strand, 39078886 - 39078822
Alignment:
Q  266 atctattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||    
T  39078886 atctattgggaaaaacccaagtcccatatcggatagacaagactcttgagaagagtttataaaga 39078822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 268 - 330
Target Start/End: Original strand, 22339732 - 22339794
Alignment:
Q  268 ctattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||    
T  22339732 ctattgggaaaaatccaagtcccacatcggatagacaagactcttgagaagagtttataaaga 22339794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 50692518 - 50692579
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||    
T  50692518 tattgggaaaaacccaagtcccacatcggatagacaagactcttgataagagtttataaaga 50692579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 269 - 329
Target Start/End: Complemental strand, 54591577 - 54591517
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaag 329  Q
    |||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||    
T  54591577 tattgggaaaaatccaagtcccacatcggatagacaagactcttgagaagagtttataaag 54591517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 271 - 330
Target Start/End: Original strand, 49477528 - 49477587
Alignment:
Q  271 ttgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||    
T  49477528 ttgggaaaaacccaagtcccacatcggatagataagactcttgagaagagtttataaaga 49477587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 9264198 - 9264137
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| |||||||||||||| ||| |||||||||||||| ||||||||    
T  9264198 tattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagtatataaaga 9264137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 9264405 - 9264344
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||| |||||| |||||||||||||||||| |||||||||||||| ||||||||    
T  9264405 tattgggaaaaatccaagtcccacatcggatagacaagactcttgagaagagtatataaaga 9264344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 9264612 - 9264551
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| |||||||||||||| ||| |||||||||||||| ||||||||    
T  9264612 tattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagtatataaaga 9264551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 37058883 - 37058822
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| ||||||| |||||||||| |||||||||||||| ||||||||    
T  37058883 tattgggaaaaacccaagtcccacatcagatagacaagactcttgagaagagtatataaaga 37058822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 54495523 - 54495584
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||| |||||| |||||||||||||| ||| |||||||||||||||||||||||    
T  54495523 tattgggaaaaatccaagtcccacatcggatagataagactcttgagaagagtttataaaga 54495584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 267 - 330
Target Start/End: Complemental strand, 22407762 - 22407699
Alignment:
Q  267 tctattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||| |||||| |||||||||||||||||| |||| ||||||||| ||||||||    
T  22407762 tctattgggaaaaatccaagtcccacatcggatagacaagactctcgagaagagtatataaaga 22407699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 277 - 328
Target Start/End: Original strand, 26366731 - 26366782
Alignment:
Q  277 aaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaa 328  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  26366731 aaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaa 26366782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 268 - 330
Target Start/End: Complemental strand, 51338554 - 51338492
Alignment:
Q  268 ctattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||||||||| ||||||| |||||| ||| |||||||||||||| ||||||||    
T  51338554 ctattgggaaaaacccaagtcccacatcagatagataagactcttgagaagagtatataaaga 51338492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 268 - 330
Target Start/End: Complemental strand, 53640285 - 53640223
Alignment:
Q  268 ctattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||||||||| ||||||| |||||| ||| |||||||||||||| ||||||||    
T  53640285 ctattgggaaaaacccaagtcccacatcagatagataagactcttgagaagagtatataaaga 53640223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 37223567 - 37223628
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||| |||| |||||||||||||| ||| ||| |||||||||||||||||||    
T  37223567 tattgggaaaaacctaagtcccacatcggatagataagactcctgagaagagtttataaaga 37223628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 40230546 - 40230485
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||||||||||||||||||  || |||||||  ||||||||||||||    
T  40230546 tattgggaaaaacccaagttccacatcggatagatgagactcttgatgagagtttataaaga 40230485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 327
Target Start/End: Complemental strand, 21832803 - 21832745
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataa 327  Q
    |||||| |||| | ||||| |||||||||||||||||| ||||||||||||||||||||    
T  21832803 tattggaaaaatctcaagtcccacatcggatagacaagactcttgagaagagtttataa 21832745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 276 - 330
Target Start/End: Original strand, 34992576 - 34992630
Alignment:
Q  276 aaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||| ||||||| |||||| ||| |||||||||||||||||||||||    
T  34992576 aaaaacccaagtcccacatcagatagataagactcttgagaagagtttataaaga 34992630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 276 - 330
Target Start/End: Original strand, 34992868 - 34992922
Alignment:
Q  276 aaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||| ||||||| |||||| ||| |||||||||||||||||||||||    
T  34992868 aaaaacccaagtcccacatcagatagataagactcttgagaagagtttataaaga 34992922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 276 - 330
Target Start/End: Complemental strand, 39956779 - 39956725
Alignment:
Q  276 aaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||| ||||| ||||||| |||||||||| |||||||||||||||||||||||    
T  39956779 aaaaactcaagtcccacatcagatagacaagactcttgagaagagtttataaaga 39956725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 51642748 - 51642686
Alignment:
Q  269 tattgggaaaaacccaa-gttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||| || |||||||||||||| ||| |||||||||||||| ||||||||    
T  51642748 tattgggaaaaacccaaagtcccacatcggatagataagactcttgagaagagtatataaaga 51642686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 4029756 - 4029695
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||| ||  ||||| |||||||||||||| ||| |||||||||||||||||||||||    
T  4029756 tattgggaataatgcaagtcccacatcggatagataagactcttgagaagagtttataaaga 4029695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 21833516 - 21833577
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||| ||||||||||||| |||||| ||||| ||||| |||| ||||||||||||||||||    
T  21833516 tattgagaaaaacccaagtcccacattggataaacaagactctggagaagagtttataaaga 21833577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 33798911 - 33798850
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||| |||||||||| | |||||||||||||||||| ||||| |||||||| ||||||||    
T  33798911 tattggaaaaaacccaaatcccacatcggatagacaagactcttaagaagagtatataaaga 33798850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 39956579 - 39956518
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||| |||||| ||||||| ||||||||||  |||| |||||||||||||||||    
T  39956579 tattgggaaaaatccaagtcccacatcagatagacaagaatcttaagaagagtttataaaga 39956518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 40230751 - 40230690
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||| ||||||||||||||||||||||||||||  || |||||||  ||||||||||||||    
T  40230751 tattgagaaaaacccaagttccacatcggatagatgagactcttgatgagagtttataaaga 40230690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 42258902 - 42258963
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||| |||||| |||||||||||||| |||  ||||||||||||| ||||||||    
T  42258902 tattgggaaaaatccaagtcccacatcggatagataagattcttgagaagagtatataaaga 42258963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 269 - 328
Target Start/End: Complemental strand, 25628033 - 25627974
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaa 328  Q
    ||||||||||||||||||| |||||||||||||| |||  |||| |||||||| ||||||    
T  25628033 tattgggaaaaacccaagtcccacatcggatagataagattcttcagaagagtatataaa 25627974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 326
Target Start/End: Original strand, 40926445 - 40926503
Alignment:
Q  268 ctattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttata 326  Q
    |||||||||||||| || || |||||||||||||| ||| ||||||| |||||||||||    
T  40926445 ctattgggaaaaacacatgtcccacatcggatagataagactcttgataagagtttata 40926503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 330
Target Start/End: Complemental strand, 47702537 - 47702475
Alignment:
Q  268 ctattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||| ||||| ||||||||||||||  || |||||||||||||| ||| ||||    
T  47702537 ctattgggaaaaacacaagtcccacatcggatagatgagactcttgagaagagtatatgaaga 47702475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 330
Target Start/End: Complemental strand, 53761507 - 53761449
Alignment:
Q  272 tgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||||| |||| ||||||||| ||| | ||||| |||||||||||||||    
T  53761507 tgggaaaaacccaagtcccacttcggatagataagacccttgataagagtttataaaga 53761449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 21832311 - 21832250
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||| ||| |||| ||||  ||||||||||||||||| |||||||||| ||||||||||||    
T  21832311 tattgagaacaacctaagtctcacatcggatagacaagactcttgagaaaagtttataaaga 21832250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 22407553 - 22407492
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||| | |||| |||||||||||||||||  |||| ||||||||| ||||||||    
T  22407553 tattgggaaaaatctaagtcccacatcggatagacaaaactctcgagaagagtatataaaga 22407492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 314
Target Start/End: Original strand, 29369793 - 29369838
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttga 314  Q
    ||||||||||||||||||| |||||||||||||| ||| |||||||    
T  29369793 tattgggaaaaacccaagtcccacatcggatagataagactcttga 29369838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 35011856 - 35011917
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| |||||| |  |||| ||| ||||||| |||||||||||||||    
T  35011856 tattgggaaaaacccaagtcccacattgagtagataagactcttgataagagtttataaaga 35011917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 35015477 - 35015538
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||| |||||| |||||||||||||| ||  ||||||| || ||||||||||||    
T  35015477 tattgggaaaaagccaagtcccacatcggatagataaaactcttgataaaagtttataaaga 35015538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 317
Target Start/End: Complemental strand, 48308570 - 48308521
Alignment:
Q  268 ctattgggaaaaacccaagttccacatcggatagacaaggctcttgagaa 317  Q
    ||||||||||||| |||||| |||||||| ||||||||| ||||||||||    
T  48308570 ctattgggaaaaatccaagtcccacatcgaatagacaagactcttgagaa 48308521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 51642540 - 51642479
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||| ||||||||||||| |||| | ||||||| ||| |||||||||||||| ||||||||    
T  51642540 tattgcgaaaaacccaagtcccacgttggatagataagactcttgagaagagtatataaaga 51642479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 53640077 - 53640016
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||| |||||| ||| |||||||||| ||| ||||||| |||||| ||||||||    
T  53640077 tattgggaaaaatccaagtcccatatcggatagataagactcttgacaagagtatataaaga 53640016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 321
Target Start/End: Original strand, 1353399 - 1353451
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagt 321  Q
    |||| |||||||||||||| |||||||| |||||||||  |||||||||||||    
T  1353399 tattaggaaaaacccaagtcccacatcgcatagacaagattcttgagaagagt 1353451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 330
Target Start/End: Complemental strand, 50203948 - 50203908
Alignment:
Q  290 cacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  50203948 cacatcggatagataagactcttgagaagagtttataaaga 50203908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 269 - 328
Target Start/End: Complemental strand, 10758880 - 10758821
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaa 328  Q
    |||||| |||||| ||||| |||||||||||||| ||| |||||||||||| | ||||||    
T  10758880 tattggaaaaaactcaagtcccacatcggatagataagactcttgagaagattatataaa 10758821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 330
Target Start/End: Original strand, 5440631 - 5440665
Alignment:
Q  296 ggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||| |||||||||||||||||||||||    
T  5440631 ggatagacaagactcttgagaagagtttataaaga 5440665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 330
Target Start/End: Complemental strand, 19820632 - 19820579
Alignment:
Q  276 aaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||| ||||||||||||||| | ||  |||||||||||||||||||||||    
T  19820632 aaaaacccatgttccacatcggata-ataaaactcttgagaagagtttataaaga 19820579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 326
Target Start/End: Complemental strand, 25578792 - 25578736
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttata 326  Q
    |||||||||||||||| || |||||||||||||| ||| || |||| |||||||||||    
T  25578792 tattgggaaaaacccatgtcccacatcggatagataagact-ttgataagagtttata 25578736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 29763788 - 29763747
Alignment:
Q  289 ccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||| ||| ||||||| |||||||||||||||    
T  29763788 ccacatcggatagataagactcttgataagagtttataaaga 29763747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 326
Target Start/End: Original strand, 32034083 - 32034140
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttata 326  Q
    ||||||||||||| || || |||||||| ||||| ||| ||||||| |||||||||||    
T  32034083 tattgggaaaaactcatgtcccacatcgaatagataagactcttgataagagtttata 32034140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 326
Target Start/End: Original strand, 38421977 - 38422034
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttata 326  Q
    |||||||||||||| |||| |||||||||||||| ||| || || | |||||||||||    
T  38421977 tattgggaaaaacctaagtcccacatcggatagataagactattaataagagtttata 38422034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 326
Target Start/End: Original strand, 40927026 - 40927079
Alignment:
Q  273 gggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttata 326  Q
    |||||||| ||| || |||||||||||||| ||| ||||||| |||||||||||    
T  40927026 gggaaaaatccatgtcccacatcggatagataagactcttgataagagtttata 40927079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 322
Target Start/End: Complemental strand, 44145506 - 44145453
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtt 322  Q
    ||||||||||||||||| | |||||||||||||| | | ||||||| |||||||    
T  44145506 tattgggaaaaacccaaatcccacatcggatagatatgactcttgataagagtt 44145453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 54369051 - 54369092
Alignment:
Q  289 ccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||| | | |||||||||||||||||||||||    
T  54369051 ccacatcggatagataggactcttgagaagagtttataaaga 54369092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 3e-23; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 267 - 330
Target Start/End: Complemental strand, 43490577 - 43490514
Alignment:
Q  267 tctattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  43490577 tctattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaaga 43490514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 48216 - 48155
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  48216 tattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaaga 48155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 28358147 - 28358086
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  28358147 tattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaaga 28358086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 34457295 - 34457356
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  34457295 tattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaaga 34457356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 2908674 - 2908613
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||    
T  2908674 tattgggaaaaacccaagtcccacatcggatagacaagactcttgagaatagtttataaaga 2908613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 38376723 - 38376784
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||    
T  38376723 tattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagtttataaaga 38376784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 43490368 - 43490307
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||    
T  43490368 tattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagtttataaaga 43490307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 269 - 328
Target Start/End: Complemental strand, 5128025 - 5127966
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaa 328  Q
    |||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  5128025 tattggaaaaaatccaagttctacatcggatagacaaggctcttgagaagagtttataaa 5127966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 3762898 - 3762959
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||||| || |||||||||||||| ||| |||||||||||||||||||||||    
T  3762898 tattgggaaaaacccatgtcccacatcggatagataagactcttgagaagagtttataaaga 3762959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 11632423 - 11632484
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||| ||||| |||||| |||||||||||||||||| |||||||||||||||||||||||    
T  11632423 tattggaaaaaatccaagtcccacatcggatagacaagactcttgagaagagtttataaaga 11632484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 269 - 328
Target Start/End: Complemental strand, 18914273 - 18914214
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaa 328  Q
    ||||||||||||||||||| ||||||||||||| |||| |||||||||| ||||||||||    
T  18914273 tattgggaaaaacccaagtcccacatcggatagtcaagactcttgagaaaagtttataaa 18914214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 269 - 328
Target Start/End: Complemental strand, 18914480 - 18914421
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaa 328  Q
    ||||||||||||||||||| ||||||||||||| |||| |||||||||| ||||||||||    
T  18914480 tattgggaaaaacccaagtcccacatcggatagtcaagactcttgagaaaagtttataaa 18914421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 269 - 328
Target Start/End: Original strand, 39268010 - 39268069
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaa 328  Q
    ||||||||||||||||||| |||||||||||||| ||| ||||||| |||||||||||||    
T  39268010 tattgggaaaaacccaagtcccacatcggatagataagactcttgataagagtttataaa 39268069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 330
Target Start/End: Original strand, 34457095 - 34457149
Alignment:
Q  276 aaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||| ||| |||||||||||||| |||||||||||||||||||||||    
T  34457095 aaaaacccaagtcccatatcggatagacaagactcttgagaagagtttataaaga 34457149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 13413576 - 13413637
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| |||||||  ||||| ||| |||||||||||||||||||||||    
T  13413576 tattgggaaaaacccaagtcccacatcaaatagataagactcttgagaagagtttataaaga 13413637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 24125054 - 24125115
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| | |||||||||| ||||| |||||||||||||| ||||||||    
T  24125054 tattgggaaaaacccaagtcctacatcggataaacaagactcttgagaagagtatataaaga 24125115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 277 - 330
Target Start/End: Complemental strand, 35527092 - 35527039
Alignment:
Q  277 aaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||| |||||||||||||| ||| |||||||||||||||||||||||    
T  35527092 aaaacccaagtcccacatcggatagataagactcttgagaagagtttataaaga 35527039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 268 - 328
Target Start/End: Complemental strand, 15510768 - 15510708
Alignment:
Q  268 ctattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaa 328  Q
    ||||| ||| |||||| |||||||||||||||||||| | |||||||||||||||||||||    
T  15510768 ctattaggagaaacccgagttccacatcggatagacatgactcttgagaagagtttataaa 15510708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 274 - 330
Target Start/End: Complemental strand, 30870992 - 30870936
Alignment:
Q  274 ggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||| |||||||||||||||| |||  ||||||||||||||||||||||    
T  30870992 ggaaaaacccaaattccacatcggatagataagattcttgagaagagtttataaaga 30870936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 269 - 328
Target Start/End: Original strand, 39268218 - 39268277
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaa 328  Q
    ||||||||||||||||||| |||||||||||||| ||  ||||||| |||||||||||||    
T  39268218 tattgggaaaaacccaagtcccacatcggatagataaaactcttgataagagtttataaa 39268277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 327
Target Start/End: Complemental strand, 18107590 - 18107532
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataa 327  Q
    ||||||||||||||||||| |||||||||||||| ||| |||||||  |||||||||||    
T  18107590 tattgggaaaaacccaagtcccacatcggatagataagactcttgatgagagtttataa 18107532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 2908881 - 2908820
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||| |||||| ||||||| |||||||||| || ||||||| ||||||||||||    
T  2908881 tattgggaaaaatccaagtcccacatcagatagacaagacttttgagaatagtttataaaga 2908820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 28156231 - 28156291
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| ||||||||||| | |||  |||||||||||||||||||||||    
T  28156231 tattgggaaaaacccaagtcccacatcggat-ggcaaaactcttgagaagagtttataaaga 28156291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 326
Target Start/End: Original strand, 29008064 - 29008121
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttata 326  Q
    |||||||||||||||| ||||||||||||||||| ||| ||||||| | |||||||||    
T  29008064 tattgggaaaaacccatgttccacatcggatagataagactcttgataggagtttata 29008121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 37781956 - 37781895
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||| |||||  ||||||||||||| ||| |||||||||||||| ||||||||    
T  37781956 tattgggaaaaactcaagtctcacatcggatagataagactcttgagaagagtatataaaga 37781895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 275 - 323
Target Start/End: Complemental strand, 35527247 - 35527199
Alignment:
Q  275 gaaaaacccaagttccacatcggatagacaaggctcttgagaagagttt 323  Q
    ||||||||||||| |||||||||||||| ||| ||||||||||||||||    
T  35527247 gaaaaacccaagtcccacatcggatagataagactcttgagaagagttt 35527199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 275 - 330
Target Start/End: Complemental strand, 40169147 - 40169092
Alignment:
Q  275 gaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||| ||||||| |||||| ||| |||||||||||||| ||||||||    
T  40169147 gaaaaacccaagtcccacatcagatagataagactcttgagaagagtatataaaga 40169092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 48421 - 48362
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| ||||||   ||||||||| |||||||||| ||||||||||||    
T  48421 tattgggaaaaacccaagtcccacatt--atagacaagactcttgagaaaagtttataaaga 48362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 35527387 - 35527325
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctctt-gagaagagtttataaaga 330  Q
    ||||||||||||||||||| |||||||||||||  ||| ||||| |||||||||||| |||||    
T  35527387 tattgggaaaaacccaagtcccacatcggatagctaagactcttagagaagagtttacaaaga 35527325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 321
Target Start/End: Original strand, 15286844 - 15286897
Alignment:
Q  268 ctattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagt 321  Q
    ||||||||||||| ||||||  ||||||||||||| ||| ||||||||||||||    
T  15286844 ctattgggaaaaatccaagtctcacatcggatagataagactcttgagaagagt 15286897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 15510596 - 15510555
Alignment:
Q  289 ccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||||| | |||||||||||||||||||||||    
T  15510596 ccacatcggatagacacgactcttgagaagagtttataaaga 15510555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 306
Target Start/End: Original strand, 28156028 - 28156065
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaag 306  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  28156028 tattgggaaaaacccaagtcccacatcggatagacaag 28156065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 271 - 328
Target Start/End: Original strand, 32501205 - 32501262
Alignment:
Q  271 ttgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaa 328  Q
    |||||||||| |||||| |||||||||||||| ||| ||||||| |||||||| ||||    
T  32501205 ttgggaaaaatccaagtcccacatcggatagataagactcttgataagagtttgtaaa 32501262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 36308034 - 36307974
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||| |||||  |||||||||||||||||||| ||| ||||||| |||||||||||||||    
T  36308034 tattggaaaaaattcaagttccacatcggatagataagactcttga-aagagtttataaaga 36307974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 37656844 - 37656783
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||| |||||| |||||  ||||||||||||| ||| |||||||||||||| ||||||||    
T  37656844 tattggaaaaaactcaagtctcacatcggatagataagactcttgagaagagtatataaaga 37656783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 328
Target Start/End: Original strand, 36878317 - 36878377
Alignment:
Q  268 ctattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaa 328  Q
    ||||||||||||||| |||| ||||||| |||||| ||| || |||| |||||||||||||    
T  36878317 ctattgggaaaaaccaaagtcccacatcagatagataagacttttgataagagtttataaa 36878377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 330
Target Start/End: Complemental strand, 3015731 - 3015672
Alignment:
Q  271 ttgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||| ||||||||||||||  || |||||||  |||||| |||||||    
T  3015731 ttgggaaaaacccaagtcccacatcggatagatgagactcttgatgagagttcataaaga 3015672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 303
Target Start/End: Complemental strand, 17130096 - 17130062
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagac 303  Q
    ||||||||||||||||||| |||||||||||||||    
T  17130096 tattgggaaaaacccaagtcccacatcggatagac 17130062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 3015529 - 3015468
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||  ||||||||||||||  || |||||||  |||||| |||||||    
T  3015529 tattgggaaaaacccaagccccacatcggatagatgagactcttgatgagagttcataaaga 3015468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 10668352 - 10668413
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| |||||||  ||||| ||  ||||||| ||||||||| |||||    
T  10668352 tattgggaaaaacccaagtcccacatcaaatagataaaactcttgataagagtttacaaaga 10668413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 302
Target Start/End: Original strand, 13413782 - 13413815
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggataga 302  Q
    ||||||||||||||||||| ||||||||||||||    
T  13413782 tattgggaaaaacccaagtcccacatcggataga 13413815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 318
Target Start/End: Original strand, 15287045 - 15287094
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaag 318  Q
    ||||||||||||||||||| | | |||||||||| ||| |||||||||||    
T  15287045 tattgggaaaaacccaagtcctatatcggatagataagactcttgagaag 15287094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 330
Target Start/End: Original strand, 17135519 - 17135572
Alignment:
Q  277 aaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||| ||||| |||||||||||| | ||| ||||||| |||||||||||||||    
T  17135519 aaaactcaagtcccacatcggataaataagactcttgataagagtttataaaga 17135572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 18107825 - 18107886
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||| | |||||||| || || ||| ||||||| |||| ||||||||||    
T  18107825 tattgggaaaaacccaattcccacatcgaatcgataagactcttgataagaatttataaaga 18107886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 326
Target Start/End: Complemental strand, 21019982 - 21019925
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttata 326  Q
    ||||||||||||| || ||||||||||||||| | ||| ||||||| |||||| ||||    
T  21019982 tattgggaaaaactcatgttccacatcggatatataagactcttgataagagtctata 21019925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 22196645 - 22196604
Alignment:
Q  289 ccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||| | | |||||||||||||||||||||||    
T  22196645 ccacatcggatagatatgactcttgagaagagtttataaaga 22196604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 38131776 - 38131817
Alignment:
Q  289 ccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||| | | |||||||||||||||||||||||    
T  38131776 ccacatcggatagataggactcttgagaagagtttataaaga 38131817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 18873305 - 18873249
Alignment:
Q  270 attgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttata 326  Q
    |||||||||| |||| || |||||||||||||| ||| || |||| |||||||||||    
T  18873305 attgggaaaagcccatgtcccacatcggatagataagactattgataagagtttata 18873249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 268 - 330
Target Start/End: Complemental strand, 16877123 - 16877061
Alignment:
Q  268 ctattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  16877123 ctattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaaga 16877061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 15101223 - 15101162
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||    
T  15101223 tattgggaaaaatccaagtcccacatcggatagacaagactcttgagaagagtttataaaga 15101162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 16590176 - 16590237
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| |||||||||||||||||| |||||| ||||| ||||||||||    
T  16590176 tattgggaaaaacccaagtcccacatcggatagacaagactcttgggaagaatttataaaga 16590237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 16605204 - 16605143
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| |||||||||||||||||| |||||| ||||| ||||||||||    
T  16605204 tattgggaaaaacccaagtcccacatcggatagacaagactcttgggaagaatttataaaga 16605143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 269 - 329
Target Start/End: Complemental strand, 6623537 - 6623477
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaag 329  Q
    ||||||||||||||||||| |||||||||||||| ||| |||||||||||||| |||||||    
T  6623537 tattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagtatataaag 6623477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 11313494 - 11313433
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||| | |||||||||||||| ||| |||||||||||||| ||||||||    
T  11313494 tattgggaaaaacccaaatcccacatcggatagataagactcttgagaagagtatataaaga 11313433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 330
Target Start/End: Original strand, 11316833 - 11316896
Alignment:
Q  267 tctattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||| ||||||||||||||||||||  || |||||||  ||||||||||||||    
T  11316833 tctattgggaaaaactcaagttccacatcggatagatgagactcttgatgagagtttataaaga 11316896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 330
Target Start/End: Original strand, 28149783 - 28149846
Alignment:
Q  267 tctattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||||||| || |||||||||||||| ||  ||||||| |||||||||||||||    
T  28149783 tctattgggaaaaacccatgtcccacatcggatagataaaactcttgataagagtttataaaga 28149846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 327
Target Start/End: Complemental strand, 19712516 - 19712458
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataa 327  Q
    |||||||||||| ||| ||||||||||||||||| ||| |||||||||| |||||||||    
T  19712516 tattgggaaaaatccatgttccacatcggatagataagactcttgagaatagtttataa 19712458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 268 - 330
Target Start/End: Original strand, 25998808 - 25998870
Alignment:
Q  268 ctattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||||||||| |||||||||||||| ||| ||| ||| || ||||||||||||    
T  25998808 ctattgggaaaaacccaagtcccacatcggatagataagactcatgataatagtttataaaga 25998870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 268 - 330
Target Start/End: Original strand, 26098333 - 26098395
Alignment:
Q  268 ctattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||||||||| |||||||||||||| ||| ||| ||| || ||||||||||||    
T  26098333 ctattgggaaaaacccaagtcccacatcggatagataagactcatgataatagtttataaaga 26098395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 18494386 - 18494325
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||| | ||||||| |||||||||| |||||||||| | ||||||||||    
T  18494386 tattgggaaaaacccaaatcccacatcagatagacaagactcttgagaataatttataaaga 18494325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 24558575 - 24558636
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||| |||||| ||||||| |||||| ||| |||||||||||||| ||||||||    
T  24558575 tattgggaaaaatccaagtcccacatcagatagataagactcttgagaagagtatataaaga 24558636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 326
Target Start/End: Original strand, 26394543 - 26394600
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttata 326  Q
    ||||||||||||| || ||||||||||||||||| ||| ||||||| |||||||||||    
T  26394543 tattgggaaaaactcatgttccacatcggatagataagactcttgataagagtttata 26394600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 329
Target Start/End: Original strand, 30539415 - 30539472
Alignment:
Q  272 tgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaag 329  Q
    |||||||||||||||| |||||||||||||| ||| || |||| ||||||||||||||    
T  30539415 tgggaaaaacccaagtcccacatcggatagataagacttttgataagagtttataaag 30539472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 275 - 330
Target Start/End: Complemental strand, 16876936 - 16876881
Alignment:
Q  275 gaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||| |||||| |||||| ||||||||||| |||||||||| ||||||||||||    
T  16876936 gaaaaatccaagtcccacataggatagacaagactcttgagaatagtttataaaga 16876881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 11317040 - 11317101
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| ||||||||||||||  |  |||||||  ||||||||||||||    
T  11317040 tattgggaaaaacccaagtcccacatcggatagatgaaactcttgatgagagtttataaaga 11317101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 25999015 - 25999076
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| ||||||||||| || ||| ||| ||| || ||||||||||||    
T  25999015 tattgggaaaaacccaagtcccacatcggattgataagactcatgataatagtttataaaga 25999076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 330
Target Start/End: Complemental strand, 5269364 - 5269324
Alignment:
Q  290 cacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  5269364 cacatcggatagataagactcttgagaagagtttataaaga 5269324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 15102737 - 15102676
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| |||||||  |||||  || |||||||  ||||||||||||||    
T  15102737 tattgggaaaaacccaagtcccacatcaaatagatgagactcttgatgagagtttataaaga 15102676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 15102863 - 15102803
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| ||||||| ||||||  || |||||||  ||||||||||||||    
T  15102863 tattgggaaaaacccaagt-ccacatcagatagatgagactcttgatgagagtttataaaga 15102803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 19054505 - 19054546
Alignment:
Q  289 ccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||| ||  |||||||||||||||||||||||    
T  19054505 ccacatcggatagataacactcttgagaagagtttataaaga 19054546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 323
Target Start/End: Complemental strand, 19292033 - 19291976
Alignment:
Q  266 atctattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagttt 323  Q
    ||||||| | ||||||| |||| |||||||||||||| ||| ||||||| ||||||||    
T  19292033 atctatttgcaaaaaccaaagtcccacatcggatagataagactcttgataagagttt 19291976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 24558780 - 24558841
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||| ||||||| | ||  ||||||||||||| ||| ||||| |||||||||||||||||    
T  24558780 tattggaaaaaacctatgtctcacatcggatagataagactctttagaagagtttataaaga 24558841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 26098746 - 26098807
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| | ||||||||| || ||| ||| ||| || ||||||||||||    
T  26098746 tattgggaaaaacccaagtcctacatcggattgataagactcatgataatagtttataaaga 26098807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 26339934 - 26339893
Alignment:
Q  289 ccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||| |||  ||||||||||||||||||||||    
T  26339934 ccacatcggatagataagaatcttgagaagagtttataaaga 26339893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 329
Target Start/End: Original strand, 30539247 - 30539287
Alignment:
Q  289 ccacatcggatagacaaggctcttgagaagagtttataaag 329  Q
    |||||||||||||| ||| ||||||| ||||||||||||||    
T  30539247 ccacatcggatagataagactcttgataagagtttataaag 30539287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 1e-22; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 267 - 329
Target Start/End: Complemental strand, 29273339 - 29273277
Alignment:
Q  267 tctattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaag 329  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  29273339 tctattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaag 29273277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 39649196 - 39649135
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||    
T  39649196 tattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagtttataaaga 39649135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 268 - 330
Target Start/End: Complemental strand, 52846962 - 52846900
Alignment:
Q  268 ctattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||||||||| |||||||||||||| ||| |||||||||||||| ||||||||    
T  52846962 ctattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagtatataaaga 52846900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 15392017 - 15392078
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| |||||||||||||| ||| |||||||||||||| ||||||||    
T  15392017 tattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagtatataaaga 15392078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 277 - 330
Target Start/End: Complemental strand, 43361656 - 43361603
Alignment:
Q  277 aaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  43361656 aaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaaga 43361603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 277 - 330
Target Start/End: Complemental strand, 43361861 - 43361808
Alignment:
Q  277 aaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  43361861 aaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaaga 43361808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 268 - 330
Target Start/End: Original strand, 9380891 - 9380953
Alignment:
Q  268 ctattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||| ||| || |||||    
T  9380891 ctattgggaaaaacccaagtcccacatcggatagacaagactcttgagaatagtataaaaaga 9380953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 268 - 330
Target Start/End: Complemental strand, 48558434 - 48558372
Alignment:
Q  268 ctattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||||||||| ||| |||||||||| ||| |||||||||||||| ||||||||    
T  48558434 ctattgggaaaaacccaagtcccatatcggatagataagactcttgagaagagtatataaaga 48558372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 11590412 - 11590473
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||| ||| |||||| ||| |||||||||||||||||| |||||||||||||||||||||||    
T  11590412 tattaggagaaacccgagtcccacatcggatagacaagactcttgagaagagtttataaaga 11590473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 12314570 - 12314631
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||| |||||| |||||||||||||||||| |||||||||||||  ||||||||    
T  12314570 tattgggaaaaatccaagtcccacatcggatagacaagactcttgagaagagcatataaaga 12314631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 39648989 - 39648929
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| |||||||| ||||| ||| |||||||||||||||||||||||    
T  39648989 tattgggaaaaacccaagtcccacatcg-atagataagactcttgagaagagtttataaaga 39648929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 269 - 329
Target Start/End: Original strand, 29265910 - 29265970
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaag 329  Q
    ||||||||||||||||||| ||||||||||| || ||| |||||||||||||| |||||||    
T  29265910 tattgggaaaaacccaagtcccacatcggatggataagactcttgagaagagtatataaag 29265970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 268 - 330
Target Start/End: Original strand, 25799111 - 25799173
Alignment:
Q  268 ctattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||| || ||||||| |||||| ||  |||||||||||||||||||||||    
T  25799111 ctattgggaaaaacccatgtcccacatcagatagataaaactcttgagaagagtttataaaga 25799173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 268 - 330
Target Start/End: Complemental strand, 38871268 - 38871206
Alignment:
Q  268 ctattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||||||||| ||||||| |||||| ||| ||||||| || ||||||||||||    
T  38871268 ctattgggaaaaacccaagtcccacatcagatagataagactcttgataaaagtttataaaga 38871206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 2997168 - 2997107
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||| |||| |||||||||||||| ||  |||||||||||||| ||||||||    
T  2997168 tattgggaaaaacctaagtcccacatcggatagataaaactcttgagaagagtatataaaga 2997107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 13959394 - 13959455
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||| ||| |||||  ||||||||||||| ||| |||||||||||||||||||||||    
T  13959394 tattgggaataacgcaagtctcacatcggatagataagactcttgagaagagtttataaaga 13959455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 268 - 319
Target Start/End: Original strand, 39648826 - 39648877
Alignment:
Q  268 ctattgggaaaaacccaagttccacatcggatagacaaggctcttgagaaga 319  Q
    |||||||||||| ||||||| |||||||||||||| ||| ||||||||||||    
T  39648826 ctattgggaaaatcccaagtcccacatcggatagataagactcttgagaaga 39648877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 319
Target Start/End: Complemental strand, 24382263 - 24382213
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaaga 319  Q
    ||||||||||| ||||||| |||||||||||||| ||| ||||||||||||    
T  24382263 tattgggaaaatcccaagtcccacatcggatagataagactcttgagaaga 24382213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 327
Target Start/End: Original strand, 45395544 - 45395602
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataa 327  Q
    ||||||||||||||||||| ||| ||| |||||| ||| ||||||| ||||||||||||    
T  45395544 tattgggaaaaacccaagtcccatatcagatagataagactcttgataagagtttataa 45395602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 1233918 - 1233979
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||| |||||||||||| ||||||||||||||  || |||||||  ||||||||||||||    
T  1233918 tattggtaaaaacccaagtcccacatcggatagatgagactcttgatgagagtttataaaga 1233979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 2997373 - 2997312
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||| |||||||| ||| | |||||||||||||| ||| |||||||||||||| ||||||||    
T  2997373 tattaggaaaaactcaaatcccacatcggatagataagactcttgagaagagtatataaaga 2997312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 29413340 - 29413401
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| | || |||| |||| ||| ||||||| |||||||||||||||    
T  29413340 tattgggaaaaacccaagtcctacttcgggtagataagactcttgataagagtttataaaga 29413401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 42845133 - 42845072
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||| |||||||| ||||| ||||||| |||||| ||| ||||||| |||||||||||||||    
T  42845133 tattaggaaaaactcaagtaccacatcagatagataagactcttgataagagtttataaaga 42845072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 325
Target Start/End: Original strand, 5222686 - 5222742
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttat 325  Q
    |||||||||||||| |||| ||||||| |||||| ||| ||||||| ||||||||||    
T  5222686 tattgggaaaaacctaagtcccacatctgatagataagactcttgataagagtttat 5222742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 330
Target Start/End: Original strand, 15391828 - 15391872
Alignment:
Q  286 gttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||| ||| |||||||||||||| ||||||||    
T  15391828 gttccacatcggatagataagactcttgagaagagtatataaaga 15391872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 269 - 328
Target Start/End: Complemental strand, 24382680 - 24382621
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaa 328  Q
    ||||| |||||| |||||| |||||||||||||| ||| ||||| | |||||||||||||    
T  24382680 tattgagaaaaaaccaagtcccacatcggatagataagactcttaaaaagagtttataaa 24382621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 330
Target Start/End: Original strand, 29413136 - 29413195
Alignment:
Q  271 ttgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||| |||||||| |||| |||| |||| ||| ||||||| |||||||||||||||    
T  29413136 ttgggaaagacccaagtcccacttcgggtagataagactcttgataagagtttataaaga 29413195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 330
Target Start/End: Complemental strand, 33342391 - 33342329
Alignment:
Q  267 tctattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||| ||||||| ||||||| ||||||  || |||||||||||||| ||||||||    
T  33342391 tctattgggaaaa-cccaagtcccacatcagatagatgagactcttgagaagagtatataaaga 33342329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 330
Target Start/End: Original strand, 15391747 - 15391801
Alignment:
Q  276 aaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||| |||||| |||||||||||||| ||| |||||||||| ||| ||||||||    
T  15391747 aaaaaaccaagtcccacatcggatagataagactcttgagaaaagtatataaaga 15391801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 326
Target Start/End: Complemental strand, 22826850 - 22826800
Alignment:
Q  276 aaaaacccaagttccacatcggatagacaaggctcttgagaagagtttata 326  Q
    ||||||||| || |||||||||||||| ||| ||||||| |||||||||||    
T  22826850 aaaaacccatgtcccacatcggatagataagactcttgataagagtttata 22826800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 329
Target Start/End: Original strand, 49828665 - 49828723
Alignment:
Q  271 ttgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaag 329  Q
    ||||||||||||||||| ||||||| |||||| | | ||||||| |||| |||||||||    
T  49828665 ttgggaaaaacccaagtcccacatctgatagataggactcttgataagattttataaag 49828723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 2697423 - 2697382
Alignment:
Q  289 ccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||| | | |||||||||||||||||||||||    
T  2697423 ccacatcggatagataggactcttgagaagagtttataaaga 2697382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 4022217 - 4022176
Alignment:
Q  289 ccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||| | | |||||||||||||||||||||||    
T  4022217 ccacatcggatagataggactcttgagaagagtttataaaga 4022176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 9381111 - 9381152
Alignment:
Q  289 ccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||||||| |||||||||||||| || |||||    
T  9381111 ccacatcggatagacaagactcttgagaagagtataaaaaga 9381152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 9381315 - 9381356
Alignment:
Q  289 ccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||||||| |||||||||||| | ||||||||    
T  9381315 ccacatcggatagacaagactcttgagaagaatatataaaga 9381356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 330
Target Start/End: Complemental strand, 10017428 - 10017379
Alignment:
Q  281 cccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||| ||||||| |||||| ||| ||||||| |||||||||||||||    
T  10017428 cccaagtgccacatcagatagataagactcttgataagagtttataaaga 10017379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 11018846 - 11018907
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||  ||||| ||||||| ||||   ||| |||||||||||||||||||||||    
T  11018846 tattgggaaaaattcaagtcccacatcagataactaagactcttgagaagagtttataaaga 11018907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 21539046 - 21538985
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||| ||| || ||| |||||||| | ||| |||||||||||| ||||||||||    
T  21539046 tattgggaaaaatccatgtcccatatcggataaataagactcttgagaagaatttataaaga 21538985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 40521585 - 40521544
Alignment:
Q  289 ccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||| |||  ||||||||||||||||||||||    
T  40521585 ccacatcggatagataagattcttgagaagagtttataaaga 40521544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 43423291 - 43423332
Alignment:
Q  289 ccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||| ||  |||||||||||||||||||||||    
T  43423291 ccacatcggatagataacactcttgagaagagtttataaaga 43423332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 46098675 - 46098736
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||| |||||| |||||||||| || |||||| ||  |||||||||||||| ||||||||    
T  46098675 tattggaaaaaactcaagttccacgtcagatagataaaactcttgagaagagtatataaaga 46098736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 302
Target Start/End: Complemental strand, 52921579 - 52921546
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggataga 302  Q
    ||||||||||||||||||| ||||||||||||||    
T  52921579 tattgggaaaaacccaagtcccacatcggataga 52921546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 5e-22; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 9378992 - 9379053
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  9378992 tattgggaaaaacccaagttccacatcggatagataagactcttgagaagagtttataaaga 9379053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 39808709 - 39808648
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  39808709 tattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaaga 39808648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 6782818 - 6782879
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||||||||  ||||||||||||| ||| |||||||||||||||||||||||    
T  6782818 tattgggaaaaacccaagtctcacatcggatagataagactcttgagaagagtttataaaga 6782879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 6783030 - 6783091
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||||||||  ||||||||||||| ||| |||||||||||||||||||||||    
T  6783030 tattgggaaaaacccaagtctcacatcggatagataagactcttgagaagagtttataaaga 6783091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 9378785 - 9378846
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| |||||||| ||||| ||| |||||||||||||||||||||||    
T  9378785 tattgggaaaaacccaagtcccacatcgaatagataagactcttgagaagagtttataaaga 9378846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 29252568 - 29252629
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| |||| ||||||||| ||| |||||||||||||||||||||||    
T  29252568 tattgggaaaaacccaagtcccacgtcggatagataagactcttgagaagagtttataaaga 29252629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 269 - 328
Target Start/End: Original strand, 16565090 - 16565149
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaa 328  Q
    ||||||||||||||||||| |||||||||||||| ||| ||||||| |||||||||||||    
T  16565090 tattgggaaaaacccaagtcccacatcggatagataagactcttgataagagtttataaa 16565149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 269 - 328
Target Start/End: Complemental strand, 16600572 - 16600513
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaa 328  Q
    ||||||||||||||||||| |||||||||||||| ||| ||||||| |||||||||||||    
T  16600572 tattgggaaaaacccaagtcccacatcggatagataagactcttgataagagtttataaa 16600513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 267 - 326
Target Start/End: Complemental strand, 35866753 - 35866694
Alignment:
Q  267 tctattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttata 326  Q
    ||||||||||||||||||||| |||||||||||||| ||| ||||||| |||||||||||    
T  35866753 tctattgggaaaaacccaagtcccacatcggatagataagactcttgataagagtttata 35866694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 269 - 318
Target Start/End: Complemental strand, 6214347 - 6214298
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaag 318  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  6214347 tattgggaaaaacccaagtcccacatcggatagacaagactcttgagaag 6214298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 48113989 - 48114050
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||| ||||||||| |||||||||||||| ||| ||||||| |||||||||||||||    
T  48113989 tattgggaataacccaagtcccacatcggatagataagactcttgataagagtttataaaga 48114050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 268 - 328
Target Start/End: Original strand, 16564885 - 16564945
Alignment:
Q  268 ctattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaa 328  Q
    |||||||||||||||||||| |||||||||||||| ||| ||||| | |||||||||||||    
T  16564885 ctattgggaaaaacccaagtcccacatcggatagataagactcttaataagagtttataaa 16564945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 268 - 328
Target Start/End: Complemental strand, 16600777 - 16600717
Alignment:
Q  268 ctattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaa 328  Q
    |||||||||||||||||||| |||||||||||||| ||| ||||| | |||||||||||||    
T  16600777 ctattgggaaaaacccaagtcccacatcggatagataagactcttaataagagtttataaa 16600717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 326
Target Start/End: Original strand, 23390582 - 23390639
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttata 326  Q
    |||||||||||||||| || |||||||||||||| ||| ||||||| |||||||||||    
T  23390582 tattgggaaaaacccatgtcccacatcggatagataagactcttgataagagtttata 23390639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 23396601 - 23396662
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||| |||||| ||||| |||||||| ||| |||||||||||||| ||||||||    
T  23396601 tattgggaaaaatccaagtcccacaacggatagataagactcttgagaagagtatataaaga 23396662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 326
Target Start/End: Complemental strand, 31357787 - 31357730
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttata 326  Q
    |||||||||||||||| || |||||||||||||| ||| ||||||| |||||||||||    
T  31357787 tattgggaaaaacccatgtcccacatcggatagataagactcttgataagagtttata 31357730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 33855683 - 33855744
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| |||||||||||||| ||| ||| ||| || ||||||||||||    
T  33855683 tattgggaaaaacccaagtcccacatcggatagataagactcatgataatagtttataaaga 33855744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 269 - 325
Target Start/End: Complemental strand, 4258112 - 4258056
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttat 325  Q
    |||||||||||||||||||  ||||||||||||| ||| ||||||| ||||||||||    
T  4258112 tattgggaaaaacccaagtctcacatcggatagataagactcttgataagagtttat 4258056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 269 - 324
Target Start/End: Complemental strand, 4258316 - 4258261
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagttta 324  Q
    ||||||||||||| ||||| |||||||||||||| ||| ||||||| |||||||||    
T  4258316 tattgggaaaaactcaagtcccacatcggatagataagactcttgataagagttta 4258261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 2179646 - 2179708
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgag-aagagtttataaaga 330  Q
    ||||||||||||  ||||| |||||||||||||| ||| |||||||| |||||||||||||||    
T  2179646 tattgggaaaaattcaagtcccacatcggatagataagactcttgagaaagagtttataaaga 2179708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 330
Target Start/End: Original strand, 33855472 - 33855534
Alignment:
Q  268 ctattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||||||||| ||| |||||||||| ||| ||| ||| || ||||||||||||    
T  33855472 ctattgggaaaaacccaagtcccatatcggatagataagactcgtgataatagtttataaaga 33855534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 330
Target Start/End: Complemental strand, 39808553 - 39808515
Alignment:
Q  292 catcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  39808553 catcggatagacaagactcttgagaagagtttataaaga 39808515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 330
Target Start/End: Complemental strand, 47856103 - 47856042
Alignment:
Q  268 ctattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||| ||||| | |||||||||||||| ||| ||||||| |||||||||||||||    
T  47856103 ctattgggaaaa-cccaaatcccacatcggatagataagactcttgataagagtttataaaga 47856042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 326
Target Start/End: Complemental strand, 10903389 - 10903332
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttata 326  Q
    ||||||||||||| || || |||||||||||||| ||| ||||||| |||||||||||    
T  10903389 tattgggaaaaacacatgtcccacatcggatagataagactcttgataagagtttata 10903332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 326
Target Start/End: Complemental strand, 10903596 - 10903539
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttata 326  Q
    ||||||||||||| || || |||||||||||||| ||| ||||||| |||||||||||    
T  10903596 tattgggaaaaactcatgtcccacatcggatagataagactcttgataagagtttata 10903539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 326
Target Start/End: Original strand, 33833942 - 33833999
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttata 326  Q
    |||||| ||||||||| || |||||||||||||| ||| ||||||| |||||||||||    
T  33833942 tattggaaaaaacccatgtcccacatcggatagataagactcttgataagagtttata 33833999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 275 - 330
Target Start/End: Original strand, 31374763 - 31374818
Alignment:
Q  275 gaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||| |||||| | |||||||||||| ||| || ||||||||||||||||||||    
T  31374763 gaaaaatccaagtcctacatcggatagataagactattgagaagagtttataaaga 31374818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 330
Target Start/End: Original strand, 8681883 - 8681937
Alignment:
Q  276 aaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||| |||||| ||||||| |||||| ||| ||||||| |||||||||||||||    
T  8681883 aaaaatccaagtcccacatcagatagataagactcttgataagagtttataaaga 8681937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 330
Target Start/End: Complemental strand, 40137809 - 40137747
Alignment:
Q  268 ctattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||| ||||||||||  |||||| ||||||||| | ||||| | |||||||||||||||    
T  40137809 ctattgggcaaaacccaagccccacattggatagacaggactcttaataagagtttataaaga 40137747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 1661283 - 1661242
Alignment:
Q  289 ccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||| ||  |||||||||||||||||||||||    
T  1661283 ccacatcggatagataaaactcttgagaagagtttataaaga 1661242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 326
Target Start/End: Original strand, 5266351 - 5266408
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttata 326  Q
    |||||||||||||||| || ||||||| |||||| ||| ||||||| ||||| |||||    
T  5266351 tattgggaaaaacccatgtcccacatcagatagataagactcttgataagagattata 5266408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 6751617 - 6751556
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| ||| ||||||||||  || |||||||  |||||||| |||||    
T  6751617 tattgggaaaaacccaagtcccaaatcggatagatgagactcttgatgagagtttacaaaga 6751556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 302
Target Start/End: Complemental strand, 6751821 - 6751788
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggataga 302  Q
    ||||||||||||||||||| ||||||||||||||    
T  6751821 tattgggaaaaacccaagtcccacatcggataga 6751788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 21557008 - 21557069
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||| |||||| ||||| |||||||||||||| |   ||||||| |||||||||||||||    
T  21557008 tattggaaaaaactcaagtcccacatcggatagatagaactcttgataagagtttataaaga 21557069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 23821788 - 23821727
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||||||||| ||||||||||| | ||| || ||||  | ||||||||||||    
T  23821788 tattgggaaaaacccaagtttcacatcggataaataagacttttgatgacagtttataaaga 23821727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 326
Target Start/End: Original strand, 33834147 - 33834204
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttata 326  Q
    |||||||||||| ||| || ||||||| |||||| ||| ||||||| |||||||||||    
T  33834147 tattgggaaaaatccatgtcccacatcagatagataagactcttgataagagtttata 33834204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 330
Target Start/End: Complemental strand, 7135334 - 7135294
Alignment:
Q  290 cacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||| | | |||||||||||||||||||||||    
T  7135334 cacatcggatagataggactcttgagaagagtttataaaga 7135294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 5e-22; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 12016795 - 12016734
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  12016795 tattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaaga 12016734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 12017003 - 12016942
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  12017003 tattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaaga 12016942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 21498523 - 21498584
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||    
T  21498523 tattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtatataaaga 21498584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 25753717 - 25753656
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||    
T  25753717 tattgggaaaaacccaagtcccacatcggatagacaagactcttgataagagtttataaaga 25753656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 43943665 - 43943726
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||    
T  43943665 tattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagtttataaaga 43943726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 54210369 - 54210430
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||    
T  54210369 tattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtatataaaga 54210430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 266 - 330
Target Start/End: Original strand, 5488356 - 5488420
Alignment:
Q  266 atctattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||||||||||| |||||||||||| | ||| |||||||||||||||||||||||    
T  5488356 atctattgggaaaaacccaagtcccacatcggataaataagactcttgagaagagtttataaaga 5488420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 28497326 - 28497265
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| |||||||||||||| ||| ||||||| |||||||||||||||    
T  28497326 tattgggaaaaacccaagtcccacatcggatagataagactcttgataagagtttataaaga 28497265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 1923103 - 1923042
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||||| || ||||||| |||||| ||| |||||||||||||||||||||||    
T  1923103 tattgggaaaaacccatgtcccacatcagatagataagactcttgagaagagtttataaaga 1923042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 27634438 - 27634377
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||| |||| |||||||||||||| ||| |||||||||||||| ||||||||    
T  27634438 tattgggaaaaaccaaagtcccacatcggatagataagactcttgagaagagtatataaaga 27634377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 29113441 - 29113502
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||||| || ||||||| |||||| ||| |||||||||||||||||||||||    
T  29113441 tattgggaaaaacccatgtcccacatcagatagataagactcttgagaagagtttataaaga 29113502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 39110899 - 39110960
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||| ||||| |||||||||||||| ||| |||||||||||||| ||||||||    
T  39110899 tattgggaaaaactcaagtcccacatcggatagataagactcttgagaagagtatataaaga 39110960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 49380992 - 49380931
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||| ||||||  ||||||||||||| ||| |||||||||||||||||||||||    
T  49380992 tattgggaaaaatccaagtctcacatcggatagataagactcttgagaagagtttataaaga 49380931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 329
Target Start/End: Original strand, 50307273 - 50307328
Alignment:
Q  274 ggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaag 329  Q
    |||||||||||||| |||||||||||||| ||| ||||||| ||||||||||||||    
T  50307273 ggaaaaacccaagtcccacatcggatagataagactcttgacaagagtttataaag 50307328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 28245985 - 28246046
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| ||||||||||||||  || |||||||  ||||||||||||||    
T  28245985 tattgggaaaaacccaagtcccacatcggatagatgagactcttgatgagagtttataaaga 28246046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 269 - 329
Target Start/End: Complemental strand, 53559417 - 53559357
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaag 329  Q
    |||||||||||| |||||| |||||||||||||| ||  |||||||||||||| |||||||    
T  53559417 tattgggaaaaaaccaagtcccacatcggatagataaaactcttgagaagagtatataaag 53559357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 269 - 328
Target Start/End: Original strand, 33629651 - 33629710
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaa 328  Q
    |||||||||||||||||||||||||| |||||||  || |||||||  ||||||||||||    
T  33629651 tattgggaaaaacccaagttccacattggatagatgagactcttgatgagagtttataaa 33629710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 330
Target Start/End: Original strand, 23350790 - 23350852
Alignment:
Q  268 ctattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||||||| | |||||||||||| | ||| ||||||| |||||| ||||||||    
T  23350790 ctattgggaaaaacccaaatcccacatcggataaataagactcttgataagagtatataaaga 23350852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 327
Target Start/End: Original strand, 26806503 - 26806561
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataa 327  Q
    ||||||||||||||||||| ||| |||||||||| | | ||||||| ||||||||||||    
T  26806503 tattgggaaaaacccaagtcccaaatcggatagataggactcttgataagagtttataa 26806561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 326
Target Start/End: Complemental strand, 8560083 - 8560026
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttata 326  Q
    |||||||||||  |||||| |||||||||||||| ||| ||||||| |||||||||||    
T  8560083 tattgggaaaagtccaagtcccacatcggatagataagactcttgataagagtttata 8560026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 17077052 - 17076991
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| ||||||||||||||  || |||||||  |||||| |||||||    
T  17077052 tattgggaaaaacccaagtcccacatcggatagatgagactcttgatgagagttcataaaga 17076991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 17077256 - 17077195
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| ||||||||||||||  || |||||||  |||||| |||||||    
T  17077256 tattgggaaaaacccaagtcccacatcggatagatgagactcttgatgagagttcataaaga 17077195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 28395170 - 28395230
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| |||||| ||||||| ||| ||||||| |||||| ||||||||    
T  28395170 tattgggaaaaacccaagtcccacattggatagataagactcttga-aagagtatataaaga 28395230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 326
Target Start/End: Complemental strand, 47491958 - 47491901
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttata 326  Q
    |||||||||||||||| || |||||||||||||| ||| ||||||| | |||||||||    
T  47491958 tattgggaaaaacccatgtcccacatcggatagataagactcttgataggagtttata 47491901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 56511289 - 56511350
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| |||||| |  |||| ||| ||||||| |||||||||||||||    
T  56511289 tattgggaaaaacccaagtcccacattgagtagataagactcttgataagagtttataaaga 56511350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 56511496 - 56511557
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| |||||| |  |||| ||| ||||||| |||||||||||||||    
T  56511496 tattgggaaaaacccaagtcccacattgagtagataagactcttgataagagtttataaaga 56511557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 3055776 - 3055836
Alignment:
Q  270 attgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||||||| |||||| ||||||| | | |||||||  ||||||||||||||    
T  3055776 attgggaaaaacccaagtcccacattggatagataggactcttgatgagagtttataaaga 3055836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 330
Target Start/End: Original strand, 49544341 - 49544385
Alignment:
Q  286 gttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||| |||  ||||||||||||||||||||||    
T  49544341 gttccacatcggatagataagattcttgagaagagtttataaaga 49544385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 302
Target Start/End: Original strand, 33629595 - 33629629
Alignment:
Q  268 ctattgggaaaaacccaagttccacatcggataga 302  Q
    |||||||||||||||||||| ||||||||||||||    
T  33629595 ctattgggaaaaacccaagtcccacatcggataga 33629629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 990559 - 990600
Alignment:
Q  289 ccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||| ||  |||||||||||||||||||||||    
T  990559 ccacatcggatagataacactcttgagaagagtttataaaga 990600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 326
Target Start/End: Original strand, 3640198 - 3640255
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttata 326  Q
    ||||||||||||| || || |||| ||||||||| ||| ||||||| |||||||||||    
T  3640198 tattgggaaaaactcatgtcccacgtcggatagataagactcttgataagagtttata 3640255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 5066051 - 5066112
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||  ||||| ||||||| |||| | ||| |||||||||||||| ||||||||    
T  5066051 tattgggaaaaattcaagtcccacatcagataaataagactcttgagaagagtatataaaga 5066112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 302
Target Start/End: Complemental strand, 11786890 - 11786857
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggataga 302  Q
    |||||||||||||| |||||||||||||||||||    
T  11786890 tattgggaaaaacctaagttccacatcggataga 11786857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 302
Target Start/End: Complemental strand, 11799057 - 11799024
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggataga 302  Q
    |||||||||||||| |||||||||||||||||||    
T  11799057 tattgggaaaaacctaagttccacatcggataga 11799024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 22865762 - 22865822
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||| ||||| |||||||||||||| ||| | ||||| || ||||||||||||    
T  22865762 tattgggaaaaactcaagt-ccacatcggatagataagacccttgataatagtttataaaga 22865822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 302
Target Start/End: Original strand, 28245783 - 28245816
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggataga 302  Q
    ||||||||||||||||||| ||||||||||||||    
T  28245783 tattgggaaaaacccaagtcccacatcggataga 28245816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 302
Target Start/End: Original strand, 33629855 - 33629888
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggataga 302  Q
    ||||||||||||||||||| ||||||||||||||    
T  33629855 tattgggaaaaacccaagtcccacatcggataga 33629888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 33797221 - 33797160
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||| | | |||||| ||||||| | | ||||||| |||||||||||||||    
T  33797221 tattgggaaaaacccgaatcccacattggatagataggactcttgataagagtttataaaga 33797160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 326
Target Start/End: Complemental strand, 45684286 - 45684229
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttata 326  Q
    |||||||||||||||| || |||||||||||||| | | ||||||| || ||||||||    
T  45684286 tattgggaaaaacccatgtcccacatcggatagatacgactcttgataaaagtttata 45684229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 51469493 - 51469534
Alignment:
Q  289 ccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||| | | |||||||||||||||||||||||    
T  51469493 ccacatcggatagataggactcttgagaagagtttataaaga 51469534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 53863897 - 53863958
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||| ||||||||||||| | |||||||||||| ||| || |||| || ||||||||||||    
T  53863897 tattgagaaaaacccaagtccaacatcggatagataagacttttgataatagtttataaaga 53863958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 330
Target Start/End: Original strand, 4645865 - 4645905
Alignment:
Q  290 cacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||| ||| |||||||||||||| ||||||||    
T  4645865 cacatcggatagataagactcttgagaagagtatataaaga 4645905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 330
Target Start/End: Original strand, 23018483 - 23018523
Alignment:
Q  290 cacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||| | | |||||||||||||||||||||||    
T  23018483 cacatcggatagatatgactcttgagaagagtttataaaga 23018523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 5e-22; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 19859917 - 19859978
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  19859917 tattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaaga 19859978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 19860029 - 19860090
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  19860029 tattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaaga 19860090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 20999101 - 20999040
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  20999101 tattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaaga 20999040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 883713 - 883652
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||    
T  883713 tattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagtttataaaga 883652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 265 - 330
Target Start/End: Complemental strand, 6986532 - 6986467
Alignment:
Q  265 catctattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||||| |||||| |||||||||||||| ||| |||||||||||||||||||||||    
T  6986532 catctattgggaaaaatccaagtcccacatcggatagataagactcttgagaagagtttataaaga 6986467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 12419830 - 12419891
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||    
T  12419830 tattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagtttataaaga 12419891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 12431890 - 12431951
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||    
T  12431890 tattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagtttataaaga 12431951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 16006969 - 16007030
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||    
T  16006969 tattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtatataaaga 16007030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 17727396 - 17727457
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||    
T  17727396 tattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagtttataaaga 17727457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 34775349 - 34775410
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||    
T  34775349 tattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagaatttataaaga 34775410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 29695451 - 29695390
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||||||||  ||||||||||||| ||| |||||||||||||||||||||||    
T  29695451 tattgggaaaaacccaagtctcacatcggatagataagactcttgagaagagtttataaaga 29695390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 266 - 330
Target Start/End: Complemental strand, 13839374 - 13839310
Alignment:
Q  266 atctattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||| |||||||| |||||| ||||||||||||||||| |||||||||||||||| ||||||    
T  13839374 atctatttggaaaaactcaagtttcacatcggatagacaagactcttgagaagagtttctaaaga 13839310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 274 - 329
Target Start/End: Original strand, 883847 - 883902
Alignment:
Q  274 ggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaag 329  Q
    |||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||    
T  883847 ggaaaaacccaagtcccatatcggatagacaagactcttgagaagagtttataaag 883902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 884049 - 884110
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| ||||||||||||||  || |||||||||||||| ||||||||    
T  884049 tattgggaaaaacccaagtcccacatcggatagatgagactcttgagaagagtatataaaga 884110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 25621397 - 25621336
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||||||||  ||||||||||||| ||| |||||||||||||| ||||||||    
T  25621397 tattgggaaaaacccaagtctcacatcggatagataagactcttgagaagagtatataaaga 25621336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 29684003 - 29684064
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| || |||| |||||||||| |||||||||||||| ||||||||    
T  29684003 tattgggaaaaacccaagtcccgcatcagatagacaagactcttgagaagagtatataaaga 29684064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 33986087 - 33986026
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||| | |||||||||||||| ||| |||||||||||||| ||||||||    
T  33986087 tattgggaaaaacccaactcccacatcggatagataagactcttgagaagagtatataaaga 33986026  T

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Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 269 - 329
Target Start/End: Original strand, 10570927 - 10570987
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaag 329  Q
    ||||||||||||||||||| ||||||| |||||| ||| |||||||||||||| |||||||    
T  10570927 tattgggaaaaacccaagtcccacatcagatagataagactcttgagaagagtatataaag 10570987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 12432097 - 12432158
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||| ||||| |||||| |||||||||||||| |||  ||||||||||||||||||||||    
T  12432097 tattggaaaaaatccaagtcccacatcggatagataagaatcttgagaagagtttataaaga 12432158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 18607365 - 18607304
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||| |||||  ||||||||||||||||| ||||| |||||||| ||||||||    
T  18607365 tattgggaaaaacacaagtctcacatcggatagacaagactcttaagaagagtatataaaga 18607304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 21734408 - 21734469
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||  | |||||||||||||| ||| |||||||||||||| ||||||||    
T  21734408 tattgggaaaaacccacatcccacatcggatagataagactcttgagaagagtatataaaga 21734469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 27545228 - 27545167
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||| ||||| ||| || |||||||||||||| ||| |||||||||||||||||||||||    
T  27545228 tattggaaaaaatccatgtcccacatcggatagataagactcttgagaagagtttataaaga 27545167  T

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Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 29684211 - 29684272
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||||||||||| |||||  |||||||  |||||||||||||| ||||||||    
T  29684211 tattgggaaaaacccaagttccgcatcgattagacaaaactcttgagaagagtatataaaga 29684272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 326
Target Start/End: Original strand, 31761124 - 31761181
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttata 326  Q
    |||||||||||||| |||| |||||||||||||| ||| || ||||||||||||||||    
T  31761124 tattgggaaaaacctaagtcccacatcggatagataagacttttgagaagagtttata 31761181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 326
Target Start/End: Original strand, 39386662 - 39386719
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttata 326  Q
    |||||||||||||||| || |||||||||||||| ||| ||||||| |||||||||||    
T  39386662 tattgggaaaaacccatgtcccacatcggatagataagactcttgataagagtttata 39386719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 276 - 328
Target Start/End: Original strand, 29101749 - 29101801
Alignment:
Q  276 aaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaa 328  Q
    |||||| ||||| |||||||||||||||||| | |||||||||||||||||||    
T  29101749 aaaaactcaagtcccacatcggatagacaagacacttgagaagagtttataaa 29101801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 269 - 321
Target Start/End: Complemental strand, 33985881 - 33985829
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagt 321  Q
    |||||| |||||||||||| |||||||||||||| ||| ||||||||||||||    
T  33985881 tattggcaaaaacccaagtcccacatcggatagataagactcttgagaagagt 33985829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 330
Target Start/End: Complemental strand, 1218990 - 1218931
Alignment:
Q  271 ttgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||| |||||| |||||||||||||||||||| ||  || ||||||||||||||||||||    
T  1218990 ttggaaaaaactcaagttccacatcggatagataaaactattgagaagagtttataaaga 1218931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 269 - 328
Target Start/End: Complemental strand, 8044658 - 8044599
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaa 328  Q
    ||||||||||||||||||| || |||| |||||| ||| ||||||| |||||||||||||    
T  8044658 tattgggaaaaacccaagtcccgcatcagatagataagactcttgataagagtttataaa 8044599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 269 - 320
Target Start/End: Original strand, 40009966 - 40010017
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagag 320  Q
    ||||||||||||||||||| |||||||||||||| ||  |||||||||||||    
T  40009966 tattgggaaaaacccaagtcccacatcggatagataaaactcttgagaagag 40010017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 326
Target Start/End: Complemental strand, 3435598 - 3435541
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttata 326  Q
    |||||| |||||  ||||| |||||||||||||| ||| |||||||||||||||||||    
T  3435598 tattggaaaaaattcaagtcccacatcggatagataagactcttgagaagagtttata 3435541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 7257720 - 7257659
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||| | |||| ||| |||||||||| ||| |||||||||| ||||||||||||    
T  7257720 tattgggaaaaatctaagtcccatatcggatagataagactcttgagaatagtttataaaga 7257659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 15518659 - 15518720
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||| ||| |||||| |||||||||| ||| ||||||| |||||| ||||||||    
T  15518659 tattgggaaaaatccatgttccaaatcggatagataagactcttgaaaagagtatataaaga 15518720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 326
Target Start/End: Original strand, 32667175 - 32667232
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttata 326  Q
    |||||||||||||| |||| ||||||| |||||| ||| ||||||| |||||||||||    
T  32667175 tattgggaaaaaccgaagtcccacatcagatagataagactcttgataagagtttata 32667232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 330
Target Start/End: Complemental strand, 26847349 - 26847293
Alignment:
Q  274 ggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||| |||||| ||||||| | | ||||||| |||||||||||||||    
T  26847349 ggaaaaacccaagtcccacattggatagataggactcttgataagagtttataaaga 26847293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 14127299 - 14127238
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||| |||| ||||||| |||| | ||| ||||||| |||| ||||||||||    
T  14127299 tattgggaaaaaccgaagtcccacatcagataaataagactcttgataagaatttataaaga 14127238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 18901956 - 18901915
Alignment:
Q  289 ccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||| ||| ||||||| |||||||||||||||    
T  18901956 ccacatcggatagataagactcttgaaaagagtttataaaga 18901915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 326
Target Start/End: Original strand, 29676286 - 29676343
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttata 326  Q
    ||||||||||||| || ||  ||||||||||||| ||| ||||||| |||||||||||    
T  29676286 tattgggaaaaacacatgtctcacatcggatagataagactcttgataagagtttata 29676343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 326
Target Start/End: Original strand, 32666969 - 32667026
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttata 326  Q
    ||||||||||||||||||| || ||| ||||| | ||| ||||||| |||||||||||    
T  32666969 tattgggaaaaacccaagtccctcattggataaataagactcttgataagagtttata 32667026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 326
Target Start/End: Complemental strand, 4721911 - 4721859
Alignment:
Q  274 ggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttata 326  Q
    ||||||||||| || ||||||||||||||  || ||||||| |||||||||||    
T  4721911 ggaaaaacccatgtcccacatcggatagattagactcttgataagagtttata 4721859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 330
Target Start/End: Complemental strand, 43688512 - 43688472
Alignment:
Q  290 cacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||| | | |||||||||||||||||||||||    
T  43688512 cacatcggatagataggactcttgagaagagtttataaaga 43688472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0989 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 3058 - 2998
Alignment:
Q  270 attgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  3058 attgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaaga 2998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 13505 - 13566
Alignment:
Q  269 tattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||    
T  13505 tattgggaaaaacccaagtcccaaatcggatagacaagactcttgagaagagtttataaaga 13566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 267 - 330
Target Start/End: Original strand, 13296 - 13359
Alignment:
Q  267 tctattgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||||||| || || |||||||||||||||||| |||||||||||||||||||||||    
T  13296 tctattgggaaaaactcaggtcccacatcggatagacaagactcttgagaagagtttataaaga 13359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 21376 - 21314
Alignment:
Q  269 tattgggaaaa-acccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    ||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  21376 tattgggaaaatacccaagtcccacatcggatagacaagactcttgagaagagtttataaaga 21314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 268 - 330
Target Start/End: Original strand, 76842 - 76905
Alignment:
Q  268 ctattgggaaaa-acccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||| |||||||| |||||||||||||| ||| |||||||||||||||||||||||    
T  76842 ctattgggaaaaaacccaagtcccacatcggatagataagactcttgagaagagtttataaaga 76905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 59518 - 59575
Alignment:
Q  270 attgggaaaaacccaagttccacatcggatagacaaggctcttgagaagagtttataaaga 330  Q
    |||||||||||||||||| |||||||||||||| |   |||||||||||||| ||||||||    
T  59518 attgggaaaaacccaagtcccacatcggatagata---ctcttgagaagagtatataaaga 59575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1138 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1138
Description:

Target: scaffold1138; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 326
Target Start/End: Complemental strand, 1978 - 1928
Alignment:
Q  276 aaaaacccaagttccacatcggatagacaaggctcttgagaagagtttata 326  Q
    ||||||||||||  ||||||||||||| ||| ||||||| |||||||||||    
T  1978 aaaaacccaagtctcacatcggatagataagactcttgataagagtttata 1928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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