View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7380_high_45 (Length: 240)
Name: NF7380_high_45
Description: NF7380
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7380_high_45 |
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Alignment Details
Target: chr3 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 5 - 220
Target Start/End: Original strand, 33315425 - 33315640
Alignment:
| Q |
5 |
gcttaatgttccgcaagatcagcatcaagaacacctctgatgaaatgttcttgaggtgcttgtttgtgcatttttctgtctctaaaattcatgacaaata |
104 |
Q |
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| T |
33315425 |
gcttaatgttccgcaagatcagcatcaagaacacctctgatgaaatgttcttgaggtgcttgtttgtgcagttttctgtctctaaaattcatgacaaata |
33315524 |
T |
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| Q |
105 |
aagcatattaactaaaaaatattggatcatgctttaaaattttccataatgtagttttagaggttatgataaagaagtttctcaagatatcataaattaa |
204 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33315525 |
aagcatattaactaaaaaatattggatcatgctttaaaattttccataatgtagttttagaggttatgataaagaagtttctcaagatatcataaattaa |
33315624 |
T |
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| Q |
205 |
gcattatctttaagac |
220 |
Q |
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|||||||||||||||| |
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| T |
33315625 |
gcattatctttaagac |
33315640 |
T |
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