View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7380_low_10 (Length: 464)

Name: NF7380_low_10
Description: NF7380
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7380_low_10
NF7380_low_10
[»] chr7 (41 HSPs)
chr7 (233-446)||(43494525-43494738)
chr7 (7-181)||(1418193-1418370)
chr7 (7-189)||(38225289-38225473)
chr7 (75-177)||(1417610-1417712)
chr7 (75-177)||(38225923-38226025)
chr7 (7-176)||(24453608-24453775)
chr7 (64-177)||(8375990-8376106)
chr7 (132-189)||(45099128-45099185)
chr7 (132-189)||(7668472-7668529)
chr7 (132-189)||(18977774-18977831)
chr7 (133-189)||(3903345-3903402)
chr7 (132-189)||(21496988-21497045)
chr7 (132-189)||(46428822-46428879)
chr7 (132-187)||(25343244-25343299)
chr7 (132-189)||(27948435-27948493)
chr7 (132-189)||(46428176-46428234)
chr7 (132-177)||(3029203-3029248)
chr7 (132-189)||(25342487-25342544)
chr7 (132-181)||(25599020-25599069)
chr7 (132-181)||(26636101-26636150)
chr7 (132-189)||(30660583-30660640)
chr7 (133-189)||(37395505-37395562)
chr7 (132-189)||(37949595-37949652)
chr7 (133-189)||(45099899-45099956)
chr7 (133-181)||(23889812-23889860)
chr7 (133-189)||(24719325-24719381)
chr7 (133-189)||(37706418-37706474)
chr7 (132-189)||(3772531-3772589)
chr7 (132-178)||(13785598-13785644)
chr7 (132-189)||(16664130-16664188)
chr7 (132-189)||(17638490-17638548)
chr7 (132-178)||(30661460-30661506)
chr7 (132-189)||(37950472-37950530)
chr7 (132-189)||(19067627-19067684)
chr7 (133-178)||(19068401-19068446)
chr7 (132-177)||(25343305-25343350)
chr7 (132-181)||(26636865-26636914)
chr7 (133-189)||(36378801-36378858)
chr7 (132-177)||(40273562-40273607)
chr7 (109-177)||(24389598-24389666)
chr7 (146-174)||(24453747-24453775)
[»] chr2 (29 HSPs)
chr2 (7-189)||(22301184-22301367)
chr2 (10-181)||(26752026-26752190)
chr2 (75-189)||(22301817-22301931)
chr2 (75-176)||(26752670-26752771)
chr2 (36-177)||(24120502-24120641)
chr2 (132-189)||(1296370-1296427)
chr2 (132-189)||(9276334-9276392)
chr2 (132-189)||(11751073-11751131)
chr2 (132-189)||(15774193-15774250)
chr2 (133-189)||(20632915-20632971)
chr2 (123-178)||(9540333-9540388)
chr2 (132-178)||(24933838-24933884)
chr2 (132-189)||(29512361-29512419)
chr2 (123-180)||(34812851-34812908)
chr2 (109-177)||(18174102-18174170)
chr2 (153-189)||(24755019-24755055)
chr2 (133-177)||(27177915-27177959)
chr2 (133-181)||(33512096-33512144)
chr2 (126-189)||(9541032-9541095)
chr2 (132-189)||(1297127-1297185)
chr2 (107-177)||(18174649-18174719)
chr2 (132-189)||(23857028-23857086)
chr2 (132-189)||(29559424-29559482)
chr2 (132-178)||(29719448-29719494)
chr2 (132-189)||(8541742-8541799)
chr2 (132-177)||(9275589-9275634)
chr2 (132-181)||(22560572-22560621)
chr2 (132-189)||(23343770-23343827)
chr2 (133-181)||(36237630-36237678)
[»] chr8 (37 HSPs)
chr8 (7-189)||(27442021-27442203)
chr8 (7-101)||(183318-183412)
chr8 (75-177)||(27441469-27441571)
chr8 (75-176)||(183893-183994)
chr8 (132-181)||(26652292-26652341)
chr8 (109-189)||(41974630-41974711)
chr8 (239-287)||(11999733-11999781)
chr8 (134-189)||(37732817-37732872)
chr8 (119-189)||(17725645-17725715)
chr8 (132-189)||(9197824-9197881)
chr8 (132-181)||(32979828-32979877)
chr8 (132-189)||(37064807-37064864)
chr8 (132-181)||(39778917-39778966)
chr8 (132-181)||(39779845-39779894)
chr8 (239-287)||(12010043-12010091)
chr8 (239-287)||(12014618-12014666)
chr8 (255-306)||(11879064-11879115)
chr8 (255-306)||(11894071-11894122)
chr8 (255-306)||(11896480-11896531)
chr8 (132-189)||(9197085-9197143)
chr8 (240-306)||(11868991-11869057)
chr8 (133-178)||(8372915-8372960)
chr8 (132-177)||(11686968-11687013)
chr8 (239-304)||(11975110-11975175)
chr8 (133-181)||(15198295-15198343)
chr8 (255-306)||(11875455-11875506)
chr8 (240-287)||(11992066-11992113)
chr8 (123-177)||(3043245-3043299)
chr8 (132-189)||(3165126-3165184)
chr8 (249-287)||(11980202-11980240)
chr8 (249-287)||(11984559-11984597)
chr8 (132-186)||(31602010-31602064)
chr8 (132-189)||(31642091-31642149)
chr8 (132-189)||(38576306-38576364)
chr8 (133-177)||(3043970-3044014)
chr8 (133-181)||(8373698-8373746)
chr8 (239-287)||(12004951-12004999)
[»] chr5 (28 HSPs)
chr5 (7-168)||(1553419-1553580)
chr5 (75-177)||(1554030-1554132)
chr5 (132-189)||(4084870-4084927)
chr5 (132-189)||(29046019-29046076)
chr5 (133-189)||(234691-234747)
chr5 (133-189)||(14478911-14478967)
chr5 (109-189)||(17071775-17071855)
chr5 (110-189)||(19128759-19128839)
chr5 (133-181)||(19360481-19360529)
chr5 (119-177)||(7632097-7632155)
chr5 (252-306)||(25858947-25859001)
chr5 (133-189)||(237826-237883)
chr5 (137-174)||(1283520-1283557)
chr5 (137-174)||(10554541-10554578)
chr5 (132-181)||(13306273-13306322)
chr5 (133-189)||(19359693-19359750)
chr5 (132-189)||(29087915-29087972)
chr5 (149-181)||(31081997-31082029)
chr5 (107-189)||(17071213-17071296)
chr5 (107-189)||(34600250-34600333)
chr5 (132-178)||(6476795-6476841)
chr5 (132-189)||(22799764-22799822)
chr5 (132-189)||(28705154-28705212)
chr5 (132-189)||(28705883-28705941)
chr5 (132-189)||(33471093-33471150)
chr5 (109-177)||(34600812-34600880)
chr5 (132-176)||(36038698-36038742)
chr5 (133-177)||(43510234-43510278)
[»] scaffold0085 (4 HSPs)
scaffold0085 (62-165)||(16581-16684)
scaffold0085 (133-189)||(22076-22132)
scaffold0085 (132-181)||(15021-15070)
scaffold0085 (132-181)||(15080-15129)
[»] chr3 (34 HSPs)
chr3 (7-141)||(982324-982457)
chr3 (77-146)||(35718410-35718479)
chr3 (132-181)||(10847290-10847339)
chr3 (132-189)||(33277509-33277566)
chr3 (132-181)||(14871152-14871201)
chr3 (132-189)||(20213536-20213593)
chr3 (132-189)||(51827499-51827556)
chr3 (123-189)||(13477047-13477114)
chr3 (78-149)||(35719158-35719228)
chr3 (123-189)||(37988214-37988281)
chr3 (132-189)||(20212970-20213028)
chr3 (119-181)||(45081395-45081457)
chr3 (132-189)||(48648193-48648251)
chr3 (132-181)||(44029774-44029823)
chr3 (132-189)||(48765075-48765132)
chr3 (132-188)||(265103-265159)
chr3 (94-189)||(33276882-33276978)
chr3 (132-180)||(37520566-37520614)
chr3 (119-187)||(44699812-44699880)
chr3 (119-187)||(46150721-46150789)
chr3 (92-189)||(8949925-8950024)
chr3 (94-189)||(10847876-10847971)
chr3 (132-174)||(981673-981715)
chr3 (132-178)||(21727534-21727580)
chr3 (132-189)||(27082766-27082824)
chr3 (132-178)||(48507037-48507083)
chr3 (132-189)||(48764467-48764525)
chr3 (132-177)||(17603171-17603216)
chr3 (132-181)||(52266458-52266507)
chr3 (148-181)||(52605504-52605537)
chr3 (132-177)||(54458670-54458715)
chr3 (133-189)||(40872814-40872870)
chr3 (101-181)||(52281765-52281845)
chr3 (146-174)||(55373727-55373755)
[»] chr1 (31 HSPs)
chr1 (132-189)||(37852513-37852570)
chr1 (132-189)||(28181523-28181580)
chr1 (132-189)||(12760765-12760823)
chr1 (123-181)||(25671168-25671226)
chr1 (151-189)||(36389765-36389803)
chr1 (132-189)||(36390372-36390430)
chr1 (132-189)||(12761501-12761558)
chr1 (132-189)||(25469091-25469148)
chr1 (132-181)||(30663981-30664030)
chr1 (132-189)||(7406234-7406292)
chr1 (132-178)||(7559204-7559250)
chr1 (132-177)||(4439211-4439256)
chr1 (132-177)||(13262835-13262880)
chr1 (132-189)||(49681678-49681735)
chr1 (133-177)||(17171933-17171977)
chr1 (133-189)||(36689071-36689127)
chr1 (133-189)||(36705171-36705227)
chr1 (94-189)||(37853102-37853198)
chr1 (151-181)||(9778996-9779026)
chr1 (132-189)||(19172580-19172638)
chr1 (151-189)||(26118663-26118701)
chr1 (132-178)||(34309235-34309281)
chr1 (132-189)||(49680800-49680858)
chr1 (132-177)||(4433852-4433897)
chr1 (132-181)||(13263521-13263570)
chr1 (133-178)||(27256718-27256763)
chr1 (132-181)||(30663356-30663405)
chr1 (132-189)||(30932800-30932857)
chr1 (133-178)||(34308474-34308519)
chr1 (152-189)||(46909387-46909424)
chr1 (132-181)||(50271788-50271837)
[»] chr6 (15 HSPs)
chr6 (133-189)||(20833972-20834028)
chr6 (132-181)||(8489284-8489333)
chr6 (132-189)||(26529517-26529574)
chr6 (132-189)||(33436278-33436335)
chr6 (132-188)||(19311831-19311887)
chr6 (132-189)||(10171265-10171323)
chr6 (132-178)||(19323771-19323817)
chr6 (133-178)||(2512439-2512484)
chr6 (132-189)||(10171970-10172027)
chr6 (146-176)||(9441240-9441270)
chr6 (132-189)||(26528812-26528870)
chr6 (132-189)||(33435329-33435387)
chr6 (109-189)||(21133208-21133289)
chr6 (109-177)||(3623728-3623796)
chr6 (146-174)||(19311847-19311875)
[»] chr4 (30 HSPs)
chr4 (123-189)||(31329713-31329780)
chr4 (132-189)||(44469483-44469540)
chr4 (132-181)||(44792641-44792690)
chr4 (132-189)||(26147037-26147095)
chr4 (132-178)||(40347556-40347602)
chr4 (107-189)||(47688459-47688541)
chr4 (132-181)||(598524-598573)
chr4 (132-177)||(599306-599351)
chr4 (132-181)||(8247695-8247744)
chr4 (132-189)||(11939446-11939503)
chr4 (137-174)||(16903664-16903701)
chr4 (132-181)||(24374788-24374837)
chr4 (132-189)||(30573714-30573771)
chr4 (132-181)||(44791723-44791772)
chr4 (109-189)||(47687899-47687980)
chr4 (101-181)||(9365168-9365248)
chr4 (134-189)||(40495085-40495141)
chr4 (133-189)||(53772798-53772854)
chr4 (92-177)||(142488-142574)
chr4 (132-189)||(2446166-2446224)
chr4 (132-189)||(7841784-7841839)
chr4 (132-189)||(8248525-8248583)
chr4 (132-189)||(8266190-8266248)
chr4 (132-189)||(20774185-20774243)
chr4 (132-178)||(56262480-56262526)
chr4 (132-178)||(56263077-56263123)
chr4 (152-189)||(1465311-1465348)
chr4 (133-177)||(2444375-2444419)
chr4 (132-176)||(8265365-8265409)
chr4 (146-174)||(16903689-16903717)
[»] scaffold0002 (1 HSPs)
scaffold0002 (132-189)||(428906-428963)
[»] scaffold0176 (1 HSPs)
scaffold0176 (132-189)||(26581-26639)
[»] scaffold1207 (1 HSPs)
scaffold1207 (132-189)||(1577-1634)
[»] scaffold0418 (1 HSPs)
scaffold0418 (134-189)||(6891-6947)
[»] scaffold0086 (1 HSPs)
scaffold0086 (132-189)||(8296-8354)
[»] scaffold0504 (1 HSPs)
scaffold0504 (133-189)||(5385-5442)
[»] scaffold0164 (1 HSPs)
scaffold0164 (132-189)||(11661-11718)
[»] scaffold0096 (1 HSPs)
scaffold0096 (133-189)||(39885-39942)


Alignment Details
Target: chr7 (Bit Score: 202; Significance: 1e-110; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 233 - 446
Target Start/End: Complemental strand, 43494738 - 43494525
Alignment:
Q  233 tatatacaggtatgcggtggtgacaggagcaaacaaaggaattggatttgagatatgcaagcaattggcttctataggaattacagtgattgtaacagca 332  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  43494738 tatatataggtatgcggtggtgacaggagcaaacaaaggaattggatttgagatatgcaatcaattggcttctataggaattacagtgattgtaacagca 43494639  T
Q  333 agagatgagtgtaggggtcttcaagcttttgataaactcaaacaagagtttgaccttgccatgtctcacagtgacaatgtgattttccatcaccttgatg 432  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  43494638 agagatgagtgtaggggtcttcaagcttttgataaactcaaacaagagtttgaccttgccatgtctcacagtgacaaagtgattttccatcaccttgatg 43494539  T
Q  433 tggttgaccctaaa 446  Q
    ||||||||||||||    
T  43494538 tggttgaccctaaa 43494525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 7 - 181
Target Start/End: Original strand, 1418193 - 1418370
Alignment:
Q  7 tttggtggttagcgcaaaggagaaggtgtgagtgtgcaaattaggggggattaagtggagaacggttcacgtgagttaatttcacagtaattaggaccct 106  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||    
T  1418193 tttggtggttagcgcaaaggagaaggtgtgagtgtgcagattaggggggatcaagtggagaacggttcacgtgagttaatttcacaataattaggacgct 1418292  T
Q  107 tggattaaacataataaatggctacgatttggtgttaacggattcgttgacacca---ggtgtcaacggatcctgact 181  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||    
T  1418293 tggattaaacataataaatggctacgatttggtgttaacggattcgttgacaccacctggtgtcaacggatcctgact 1418370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 7 - 189
Target Start/End: Complemental strand, 38225473 - 38225289
Alignment:
Q  7 tttggtggttagcgcaaaggagaaggtgtgagtgtgcaaattaggggggattaagtggagaacggttcacgtgagtt-aatttcacagtaattaggaccc 105  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  38225473 tttggtggttagcgcaaaggagaaggtgtgagagtgcagattaggggggatcaagtggagaacggttcacgtgagtttaatttcacagtaattagaaccc 38225374  T
Q  106 ttggattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||    
T  38225373 ttggattaaacataataaatggctatgatttggtgttaacggattcgttgacacctggtgtcaacggatcatgactcatatatat 38225289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 75 - 177
Target Start/End: Complemental strand, 1417712 - 1417610
Alignment:
Q  75 acgtgagttaatttcacagtaattaggacccttggattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggat 174  Q
    |||||||||||||| ||| |||| |||||||||||||||||  || ||||||| || |||||||||| |||| ||||||||||||| |||||||||||||    
T  1417712 acgtgagttaattttacattaatcaggacccttggattaaatgtattaaatggttaagatttggtgtcaacgaattcgttgacacctggtgtcaacggat 1417613  T
Q  175 cct 177  Q
    |||    
T  1417612 cct 1417610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 75 - 177
Target Start/End: Original strand, 38225923 - 38226025
Alignment:
Q  75 acgtgagttaatttcacagtaattaggacccttggattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggat 174  Q
    |||||||||||||| ||| ||||  ||||||||||||||||  || ||||||| || |||||||||| |||| ||||||||||||| |||||||||||||    
T  38225923 acgtgagttaattttacaataatctggacccttggattaaatgtattaaatggttaagatttggtgtcaacgaattcgttgacacctggtgtcaacggat 38226022  T
Q  175 cct 177  Q
    |||    
T  38226023 cct 38226025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 7 - 176
Target Start/End: Original strand, 24453608 - 24453775
Alignment:
Q  7 tttggtggttagcgcaaaggagaaggtgtgagtgtgcaaattaggggggattaagtggagaacggttcacgtgagttaatttcacagtaattaggaccct 106  Q
    |||| ||||||| |||||| |||| | | ||||||||| |||||| ||||| || |||||||  |||||||||||||||||||| | |||||| ||||||    
T  24453608 tttgttggttagagcaaagaagaatgag-gagtgtgcagattaggagggatcaaatggagaaaagttcacgtgagttaatttca-aataattatgaccct 24453705  T
Q  107 tggattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcc 176  Q
    |||||||||  || |||||  ||| |||||||||| |||  || |||||||||| |||||||||| ||||    
T  24453706 tggattaaatgtattaaataactaagatttggtgtcaacaaatccgttgacacctggtgtcaacgaatcc 24453775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 64 - 177
Target Start/End: Complemental strand, 8376106 - 8375990
Alignment:
Q  64 gagaacggttcacgtgagttaatttcacagtaattaggacccttggattaaacataataaatggctacgatttggtgt---taacggattcgttgacacc 160  Q
    ||||| |||||| |||||||||||| ||| ||||||||||||||||||||||  || |||||||||| ||||| ||||   ||| |||||||||||||||    
T  8376106 gagaaaggttcatgtgagttaattttacaataattaggacccttggattaaatgtattaaatggctaagatttagtgtcaataatggattcgttgacacc 8376007  T
Q  161 aggtgtcaacggatcct 177  Q
     |||| ||| |||||||    
T  8376006 tggtgccaatggatcct 8375990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 45099185 - 45099128
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    ||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||    
T  45099185 gatttggtgttaacgaattcgttgacacctgatgtcaacggatcctgactatatatat 45099128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 7668529 - 7668472
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    |||||||||| |||| || |||||||||| ||||||||||||||||||||||||||||    
T  7668529 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactatatatat 7668472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 18977774 - 18977831
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    ||||||||||||||| || |||||||||| |||||||| |||||||||||||||||||    
T  18977774 gatttggtgttaacgaatccgttgacacctggtgtcaatggatcctgactatatatat 18977831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 3903345 - 3903402
Alignment:
Q  133 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgac-tatatatat 189  Q
    ||||||||| ||||||| |||||||||| ||||||||||||||||||| |||||||||    
T  3903345 atttggtgtcaacggatccgttgacacctggtgtcaacggatcctgacttatatatat 3903402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 21496988 - 21497045
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    |||||||||| |||| ||||||||||||| | |||||||||||||||| |||||||||    
T  21496988 gatttggtgtcaacgaattcgttgacacctgttgtcaacggatcctgattatatatat 21497045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 46428822 - 46428879
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    |||||| ||| |||| ||||||||||||| |||||||||||||||||||| |||||||    
T  46428822 gatttgatgtcaacgaattcgttgacacctggtgtcaacggatcctgactctatatat 46428879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 132 - 187
Target Start/End: Original strand, 25343244 - 25343299
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatat 187  Q
    |||||||||| |||| |||| |||||||| |||||||||||||||||||| |||||    
T  25343244 gatttggtgtcaacgaattcattgacacctggtgtcaacggatcctgactctatat 25343299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 27948493 - 27948435
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    |||||||||| |||| ||||||||||||| |||||||||||||||| ||| ||||||||    
T  27948493 gatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctaactcatatatat 27948435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 46428234 - 46428176
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    |||||||||| |||| || |||||||||| |||||||||||||||||||| ||||||||    
T  46428234 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcatatatat 46428176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 3029203 - 3029248
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcct 177  Q
    |||||||||| |||| ||||||||||||| ||||||||||||||||    
T  3029203 gatttggtgtcaacgaattcgttgacacctggtgtcaacggatcct 3029248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 25342544 - 25342487
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    |||||||||| |||| || |||||||||| |||||||||||||||| ||| |||||||    
T  25342544 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctaactctatatat 25342487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 25599069 - 25599020
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 181  Q
    |||||||||| |||| || |||||||||| ||||||||||||||||||||    
T  25599069 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgact 25599020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 26636150 - 26636101
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 181  Q
    |||||||||| |||| || |||||||||| ||||||||||||||||||||    
T  26636150 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgact 26636101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 30660640 - 30660583
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    |||||||||| |||| || |||||||||| |||||||||||||||| ||| |||||||    
T  30660640 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctaactctatatat 30660583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 37395505 - 37395562
Alignment:
Q  133 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    |||||||||||||| || |||||||||| |||||||||||||||| ||| ||||||||    
T  37395505 atttggtgttaacgaatccgttgacacctggtgtcaacggatcctaactcatatatat 37395562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 37949652 - 37949595
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    |||||||||| |||| || |||||||||| ||||||||||||||||| || |||||||    
T  37949652 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgtctctatatat 37949595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 45099899 - 45099956
Alignment:
Q  133 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    ||||||||| |||| || |||||||||| |||||||||||||||||||| ||||||||    
T  45099899 atttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcatatatat 45099956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 23889812 - 23889860
Alignment:
Q  133 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 181  Q
    ||||||||| |||| |||||||||||||||||| ||||||||| |||||    
T  23889812 atttggtgtcaacgaattcgttgacaccaggtgccaacggatcttgact 23889860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 24719381 - 24719325
Alignment:
Q  133 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    ||||||||| |||| || |||||||| | |||||||||||||||| |||||||||||    
T  24719381 atttggtgtcaacgaatccgttgacatctggtgtcaacggatcctaactatatatat 24719325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 37706474 - 37706418
Alignment:
Q  133 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    |||||||||||||| || |||||| ||| |||||||| ||||||||||| |||||||    
T  37706474 atttggtgttaacgaatccgttgatacctggtgtcaatggatcctgactctatatat 37706418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 3772531 - 3772589
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    |||||||||| |||| || |||||||||| |||||||||||||||| ||| ||||||||    
T  3772531 gatttggtgtcaacgaatacgttgacacctggtgtcaacggatcctaactcatatatat 3772589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 13785598 - 13785644
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctg 178  Q
    |||||||||| |||| || |||||||||| |||||||||||||||||    
T  13785598 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctg 13785644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 16664130 - 16664188
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    ||||| |||| ||||||| |||||||||| |||||||||||||||| ||| ||||||||    
T  16664130 gatttagtgtcaacggatccgttgacacctggtgtcaacggatcctaactcatatatat 16664188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 17638490 - 17638548
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    ||||| |||| ||||||| |||||||||| |||||||||||||||| ||| ||||||||    
T  17638490 gatttagtgtcaacggatccgttgacacctggtgtcaacggatcctaactcatatatat 17638548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 30661460 - 30661506
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctg 178  Q
    |||||||||| |||| || |||||||||| |||||||||||||||||    
T  30661460 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctg 30661506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 37950472 - 37950530
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    |||||||||| |||| || |||||||||| |||||||||||||||| ||| ||||||||    
T  37950472 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctaactcatatatat 37950530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 19067684 - 19067627
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    |||||||||| |||| || |||||||||  |||||||||||||||||  |||||||||    
T  19067684 gatttggtgtcaacgaatccgttgacacgtggtgtcaacggatcctgtatatatatat 19067627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 19068401 - 19068446
Alignment:
Q  133 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctg 178  Q
    ||||||||| |||| || |||||||||| |||||||||||||||||    
T  19068401 atttggtgtcaacgaatacgttgacacctggtgtcaacggatcctg 19068446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 25343350 - 25343305
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcct 177  Q
    |||||||||| |||| || |||||||||| ||||||||||||||||    
T  25343350 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 25343305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 26636865 - 26636914
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 181  Q
    |||||||||| |||| || ||||||||||  |||||||||||||||||||    
T  26636865 gatttggtgtcaacgaatccgttgacaccttgtgtcaacggatcctgact 26636914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 36378858 - 36378801
Alignment:
Q  133 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    ||||||||| |||| || ||| |||||||||||||||| |||||||||| ||||||||    
T  36378858 atttggtgtcaacgaatccgtcgacaccaggtgtcaacagatcctgactcatatatat 36378801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 40273607 - 40273562
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcct 177  Q
    |||||||||| |||| |||| |||||||| ||||||||||||||||    
T  40273607 gatttggtgtcaacgaattcattgacacctggtgtcaacggatcct 40273562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 109 - 177
Target Start/End: Original strand, 24389598 - 24389666
Alignment:
Q  109 gattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcct 177  Q
    ||||||| | ||||||||| |  |||||||||| || | || |||||||||| ||||||||||||||||    
T  24389598 gattaaataaaataaatggttgagatttggtgtcaatgaatccgttgacacctggtgtcaacggatcct 24389666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 146 - 174
Target Start/End: Complemental strand, 24453775 - 24453747
Alignment:
Q  146 ggattcgttgacaccaggtgtcaacggat 174  Q
    |||||||||||||||||||||||||||||    
T  24453775 ggattcgttgacaccaggtgtcaacggat 24453747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 152; Significance: 3e-80; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 7 - 189
Target Start/End: Complemental strand, 22301367 - 22301184
Alignment:
Q  7 tttggtggttagcgcaaaggagaaggtgtgagtgtgcaaattaggggggattaagtggagaacggttcacgtgagttaatttcacagtaattaggaccct 106  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  22301367 tttggtggttagcgcaaaggagaaggtgtgagagtgcagattaggggggatcaagtggagaacggttcacgtgagttaatttcacagtaattagaaccct 22301268  T
Q  107 tggattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  22301267 tggattaaacataataaatggctatgatttggtgttaacggattcgttgacacctggtgtcaacggatcctgactcatatatat 22301184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 10 - 181
Target Start/End: Complemental strand, 26752190 - 26752026
Alignment:
Q  10 ggtggttagcgcaaaggagaaggtgtgagtgtgcaaattaggggggattaagtggagaacggttcacgtgagttaatttcacagtaattaggacccttgg 109  Q
    |||||||||||||||||||||||||||||       |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  26752190 ggtggttagcgcaaaggagaaggtgtgag-------attaggggggatcaagtggagaacggttcacgtgagttaatttcacaataattaggacccttgg 26752098  T
Q  110 attaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 181  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  26752097 attaaacataataaatggctacgatttagtgttaacggattcgttgacacctggtgtcaacggatcctgact 26752026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 75 - 189
Target Start/End: Original strand, 22301817 - 22301931
Alignment:
Q  75 acgtgagttaatttcacagtaattaggacccttggattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggat 174  Q
    |||||||||||||| ||| ||||  ||||||||||||||||  || ||||||| || |||||||||| |||| ||||||||||||| |||||||||||||    
T  22301817 acgtgagttaattttacaataatcgggacccttggattaaatgtattaaatggttaagatttggtgtcaacgaattcgttgacacctggtgtcaacggat 22301916  T
Q  175 cctgactatatatat 189  Q
    |||  ||||||||||    
T  22301917 cctatctatatatat 22301931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 75 - 176
Target Start/End: Original strand, 26752670 - 26752771
Alignment:
Q  75 acgtgagttaatttcacagtaattaggacccttggattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggat 174  Q
    |||||||||||||| |||||||| |||||||||||||||||  || ||||||| || |||||| ||| |||| ||||||||||||| |||||||||||||    
T  26752670 acgtgagttaattttacagtaatcaggacccttggattaaatgtattaaatggttaagatttgatgtcaacgaattcgttgacacctggtgtcaacggat 26752769  T
Q  175 cc 176  Q
    ||    
T  26752770 cc 26752771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 36 - 177
Target Start/End: Complemental strand, 24120641 - 24120502
Alignment:
Q  36 gagtgtgcaaattaggggggattaagtggagaacggttcacgtgagttaatttcacagtaattaggacccttggattaaacataataaatggctacgatt 135  Q
    ||||||||||||||||||  || |  ||||||| |||||| |||||||||||| ||| || |||||||| ||| ||||||  || |||||||||| ||||    
T  24120641 gagtgtgcaaattagggg--atcagatggagaaaggttcatgtgagttaattttacaatagttaggaccattgaattaaatgtattaaatggctaagatt 24120544  T
Q  136 tggtgttaacggattcgttgacaccaggtgtcaacggatcct 177  Q
    | |||| || ||||| |||||||||  |||||||| ||||||    
T  24120543 tagtgtcaatggattggttgacacctagtgtcaacagatcct 24120502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 1296427 - 1296370
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    |||||||||| |||| ||||||||||||| |||||||||||||||||||| |||||||    
T  1296427 gatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctgactctatatat 1296370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 9276334 - 9276392
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    |||||||||| |||| ||||||||||||| |||||||||||||||||||| ||||||||    
T  9276334 gatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctgactcatatatat 9276392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 11751073 - 11751131
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||| ||| ||||||||    
T  11751073 gatttggtgttaacgaattcgttgacacctggtgtcaacggatcctaactcatatatat 11751131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 15774250 - 15774193
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    |||||||||| |||  ||||||||||||||||||||||||||||||  ||||||||||    
T  15774250 gatttggtgtcaacaaattcgttgacaccaggtgtcaacggatcctatctatatatat 15774193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 20632915 - 20632971
Alignment:
Q  133 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    ||||| ||| || ||||||||| ||||| ||||||||||||||||||||||||||||    
T  20632915 atttgatgtcaatggattcgttaacacctggtgtcaacggatcctgactatatatat 20632971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 123 - 178
Target Start/End: Complemental strand, 9540388 - 9540333
Alignment:
Q  123 aatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctg 178  Q
    ||||| || |||||||||| |||| ||||||||||||| |||||||||||||||||    
T  9540388 aatggttaagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctg 9540333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 24933884 - 24933838
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctg 178  Q
    |||||||||| || | |||||||||||||||||||||||||||||||    
T  24933884 gatttggtgtcaatgaattcgttgacaccaggtgtcaacggatcctg 24933838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 29512419 - 29512361
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    |||||||||| |||  |||||||||||||||||||||||||||| ||||| ||||||||    
T  29512419 gatttggtgtcaacaaattcgttgacaccaggtgtcaacggatcatgactcatatatat 29512361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 34812851 - 34812908
Alignment:
Q  123 aatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgac 180  Q
    ||||| || ||||||||||||||| || |||||||| | |||||||||||||||||||    
T  34812851 aatggttaggatttggtgttaacgaatccgttgacaactggtgtcaacggatcctgac 34812908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 109 - 177
Target Start/End: Complemental strand, 18174170 - 18174102
Alignment:
Q  109 gattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcct 177  Q
    ||||||| | |||||| || | ||||||||||| |||| ||||||| ||||| ||||||||||||||||    
T  18174170 gattaaataaaataaacggttgcgatttggtgtcaacgaattcgttaacacctggtgtcaacggatcct 18174102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 189
Target Start/End: Original strand, 24755019 - 24755055
Alignment:
Q  153 ttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    |||||||| ||||||||||||||||||||||||||||    
T  24755019 ttgacacctggtgtcaacggatcctgactatatatat 24755055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 27177959 - 27177915
Alignment:
Q  133 atttggtgttaacggattcgttgacaccaggtgtcaacggatcct 177  Q
    ||||||||| |||| ||||||||||||| ||||||||||||||||    
T  27177959 atttggtgtcaacgaattcgttgacacctggtgtcaacggatcct 27177915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 33512144 - 33512096
Alignment:
Q  133 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 181  Q
    |||| |||| |||| |||||||||||| |||||||||||||||||||||    
T  33512144 atttagtgtcaacgaattcgttgacactaggtgtcaacggatcctgact 33512096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 189
Target Start/End: Original strand, 9541032 - 9541095
Alignment:
Q  126 ggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    ||||| |||||||||| |||| ||||||||||| |  ||| |||||||||||| ||||||||||    
T  9541032 ggctaagatttggtgtcaacgaattcgttgacatctcgtgccaacggatcctgtctatatatat 9541095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 1297127 - 1297185
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    |||||||||| |||| || |||||||||| |||||||||||||||| ||| ||||||||    
T  1297127 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctaactcatatatat 1297185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 177
Target Start/End: Original strand, 18174649 - 18174719
Alignment:
Q  107 tggattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcct 177  Q
    ||||||||| | |||||| || |  |||||||||| |||| ||||||||||||| | ||||||||||||||    
T  18174649 tggattaaataaaataaacggttgagatttggtgtcaacgaattcgttgacacctgatgtcaacggatcct 18174719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 23857028 - 23857086
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    |||||||||| |||  || ||||||||||||||||||||||||||| ||| ||||||||    
T  23857028 gatttggtgtcaaccaatccgttgacaccaggtgtcaacggatcctaactcatatatat 23857086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 29559424 - 29559482
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    |||||||||| |||| ||||||||||||| ||||||||| |||||| ||| ||||||||    
T  29559424 gatttggtgtcaacgaattcgttgacacctggtgtcaacagatcctaactcatatatat 29559482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 29719494 - 29719448
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctg 178  Q
    |||||||||| |||| || |||||||||| |||||||||||||||||    
T  29719494 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctg 29719448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 8541799 - 8541742
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    ||||| |||| |||| ||||||||| ||| | |||||||||||||||||| |||||||    
T  8541799 gattttgtgtcaacgaattcgttgagacctgatgtcaacggatcctgactctatatat 8541742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 9275634 - 9275589
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcct 177  Q
    |||||||||| |||| || |||||||||| ||||||||||||||||    
T  9275634 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 9275589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 22560572 - 22560621
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 181  Q
    |||||||||| |||| || |||||||||| | ||||||||||||||||||    
T  22560572 gatttggtgtcaacgaatccgttgacacctgatgtcaacggatcctgact 22560621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 23343827 - 23343770
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    |||||| ||| |||| || |||||||| | ||||||||| ||||||||||||||||||    
T  23343827 gatttgatgtcaacgaatccgttgacatctggtgtcaacagatcctgactatatatat 23343770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 36237678 - 36237630
Alignment:
Q  133 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 181  Q
    ||||||||| || | || |||||||||| ||||||||||||||||||||    
T  36237678 atttggtgtcaatgaatccgttgacacctggtgtcaacggatcctgact 36237630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 140; Significance: 4e-73; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 7 - 189
Target Start/End: Original strand, 27442021 - 27442203
Alignment:
Q  7 tttggtggttagcgcaaaggagaaggtgtgagtgtgcaaattaggggggattaagtggagaacggttcacgtgagttaatttcacagtaattaggaccct 106  Q
    |||||||||||||||||||||||||||||||| ||| | |||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||    
T  27442021 tttggtggttagcgcaaaggagaaggtgtgagagtg-agattaggggggatcaagtggagaatggttcacgtgagttaatttcacagtaattagaaccct 27442119  T
Q  107 tggattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  27442120 tggattaaacataataaatggctatgatttggtgttaacggattcgttgacacctggtgtcaacggatcctgactcatatatat 27442203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 7 - 101
Target Start/End: Complemental strand, 183412 - 183318
Alignment:
Q  7 tttggtggttagcgcaaaggagaaggtgtgagtgtgcaaattaggggggattaagtggagaacggttcacgtgagttaatttcacagtaattagg 101  Q
    |||||| ||| |||||||||||||||| |||||||||| ||||| |||||| ||||||||||||||||| |||||||||||||||| ||||||||    
T  183412 tttggtagttggcgcaaaggagaaggtttgagtgtgcagattagcggggatcaagtggagaacggttcatgtgagttaatttcacaataattagg 183318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 75 - 177
Target Start/End: Complemental strand, 27441571 - 27441469
Alignment:
Q  75 acgtgagttaatttcacagtaattaggacccttggattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggat 174  Q
    |||||||||||||| ||| ||||  | ||||||||||||||  || ||||||| || |||||| ||| |||| ||||||||||||| |||||||||||||    
T  27441571 acgtgagttaattttacaataatcggaacccttggattaaatgtattaaatggttaagatttgatgtcaacgaattcgttgacacctggtgtcaacggat 27441472  T
Q  175 cct 177  Q
    |||    
T  27441471 cct 27441469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 75 - 176
Target Start/End: Original strand, 183893 - 183994
Alignment:
Q  75 acgtgagttaatttcacagtaattaggacccttggattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggat 174  Q
    |||||||||||||| ||| |||| ||||| |||||||||||  || ||||| | || ||||||||||||||| ||||||||||| | ||| |||||| ||    
T  183893 acgtgagttaattttacaataatcaggacacttggattaaatgtattaaatagttaagatttggtgttaacgaattcgttgacatctggtatcaacgaat 183992  T
Q  175 cc 176  Q
    ||    
T  183993 cc 183994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 26652341 - 26652292
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 181  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  26652341 gatttggtgttaacgaattcgttgacacctggtgtcaacggatcctgact 26652292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 189
Target Start/End: Complemental strand, 41974711 - 41974630
Alignment:
Q  109 gattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    ||||||| ||||| |||||||  |||||||||| |||| || |||||||||| |||||||||||||||||||| ||||||||    
T  41974711 gattaaatataatgaatggctgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcatatatat 41974630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 239 - 287
Target Start/End: Complemental strand, 11999781 - 11999733
Alignment:
Q  239 caggtatgcggtggtgacaggagcaaacaaaggaattggatttgagata 287  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  11999781 caggtatgcagtggtgacaggatcaaacaaaggaattggatttgagata 11999733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 134 - 189
Target Start/End: Complemental strand, 37732872 - 37732817
Alignment:
Q  134 tttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    |||||||| |||| || ||||||||||||||||||||||||||||||| |||||||    
T  37732872 tttggtgtcaacgaatccgttgacaccaggtgtcaacggatcctgactctatatat 37732817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 119 - 189
Target Start/End: Original strand, 17725645 - 17725715
Alignment:
Q  119 aataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    ||||||||| || |||||||||| |||| ||||||||||||| | ||||||||||||||| || |||||||    
T  17725645 aataaatggataggatttggtgtcaacgaattcgttgacacctgctgtcaacggatcctgtctctatatat 17725715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 9197824 - 9197881
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    |||||||||| |||| ||||||||||||  |||||||||||||||||||| |||||||    
T  9197824 gatttggtgtcaacgaattcgttgacacttggtgtcaacggatcctgactctatatat 9197881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 32979828 - 32979877
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 181  Q
    ||||||||||||||  ||||||||||||| ||||||||||||||||||||    
T  32979828 gatttggtgttaacaaattcgttgacacctggtgtcaacggatcctgact 32979877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 37064864 - 37064807
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    |||||||||| || | ||||||||||||| ||||||||| ||||||||||||||||||    
T  37064864 gatttggtgtcaatgaattcgttgacacctggtgtcaacagatcctgactatatatat 37064807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 39778966 - 39778917
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 181  Q
    ||||||||||||||| ||||||||||||| |||||||| |||||||||||    
T  39778966 gatttggtgttaacgaattcgttgacacctggtgtcaatggatcctgact 39778917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 39779845 - 39779894
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 181  Q
    ||||||||||||||| ||||||||||||| |||||||| |||||||||||    
T  39779845 gatttggtgttaacgaattcgttgacacctggtgtcaatggatcctgact 39779894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 239 - 287
Target Start/End: Complemental strand, 12010091 - 12010043
Alignment:
Q  239 caggtatgcggtggtgacaggagcaaacaaaggaattggatttgagata 287  Q
    ||||||||| ||||||||||||||||||||||||||||| || ||||||    
T  12010091 caggtatgcagtggtgacaggagcaaacaaaggaattgggttagagata 12010043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 239 - 287
Target Start/End: Complemental strand, 12014666 - 12014618
Alignment:
Q  239 caggtatgcggtggtgacaggagcaaacaaaggaattggatttgagata 287  Q
    ||||||||| |||||||| |||||||||||||| |||||||||||||||    
T  12014666 caggtatgcagtggtgactggagcaaacaaagggattggatttgagata 12014618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 306
Target Start/End: Complemental strand, 11879115 - 11879064
Alignment:
Q  255 acaggagcaaacaaaggaattggatttgagatatgcaagcaattggcttcta 306  Q
    |||||||||||||||||||| |||||||   |||||||||||||||||||||    
T  11879115 acaggagcaaacaaaggaataggatttgcagtatgcaagcaattggcttcta 11879064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 306
Target Start/End: Complemental strand, 11894122 - 11894071
Alignment:
Q  255 acaggagcaaacaaaggaattggatttgagatatgcaagcaattggcttcta 306  Q
    |||||||||||||||||||| |||||||   |||||||||||||||||||||    
T  11894122 acaggagcaaacaaaggaataggatttgcagtatgcaagcaattggcttcta 11894071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 306
Target Start/End: Complemental strand, 11896531 - 11896480
Alignment:
Q  255 acaggagcaaacaaaggaattggatttgagatatgcaagcaattggcttcta 306  Q
    |||||||||||||||||||| |||||||   |||||||||||||||||||||    
T  11896531 acaggagcaaacaaaggaataggatttgcagtatgcaagcaattggcttcta 11896480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 9197143 - 9197085
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    |||||||||| |||| ||||||||||||| ||||||||||||| |||||| ||||||||    
T  9197143 gatttggtgtcaacgaattcgttgacacctggtgtcaacggattctgactcatatatat 9197085  T

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Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 306
Target Start/End: Complemental strand, 11869057 - 11868991
Alignment:
Q  240 aggtatgcggtggtgacaggagcaaacaaaggaattggatttgagatatgcaagcaattggcttcta 306  Q
    |||||||| || || |||||||||||||||||||| |||||||   ||||||| |||||||||||||    
T  11869057 aggtatgcagttgttacaggagcaaacaaaggaataggatttgcagtatgcaatcaattggcttcta 11868991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 8372960 - 8372915
Alignment:
Q  133 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctg 178  Q
    ||||||||| |||| || ||||||||||||||||||||||||||||    
T  8372960 atttggtgtcaacgaatccgttgacaccaggtgtcaacggatcctg 8372915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 11686968 - 11687013
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcct 177  Q
    ||||| |||| |||| ||||||||||||||||||||||||||||||    
T  11686968 gatttagtgtcaacgaattcgttgacaccaggtgtcaacggatcct 11687013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 239 - 304
Target Start/End: Complemental strand, 11975175 - 11975110
Alignment:
Q  239 caggtatgcggtggtgacaggagcaaacaaaggaattggatttgagatatgcaagcaattggcttc 304  Q
    ||||||||| |||||||| |||||||||||||||||||| ||||| |||   |||||||| |||||    
T  11975175 caggtatgcagtggtgactggagcaaacaaaggaattgggtttgaaatagttaagcaattagcttc 11975110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 15198295 - 15198343
Alignment:
Q  133 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 181  Q
    ||||||||| |||  |||||||||||||||||||||| |||||||||||    
T  15198295 atttggtgtcaacaaattcgttgacaccaggtgtcaaaggatcctgact 15198343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 306
Target Start/End: Complemental strand, 11875506 - 11875455
Alignment:
Q  255 acaggagcaaacaaaggaattggatttgagatatgcaagcaattggcttcta 306  Q
    |||||||||||||||||||| |||||||   ||||||| |||||||||||||    
T  11875506 acaggagcaaacaaaggaataggatttgcagtatgcaatcaattggcttcta 11875455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 287
Target Start/End: Complemental strand, 11992113 - 11992066
Alignment:
Q  240 aggtatgcggtggtgacaggagcaaacaaaggaattggatttgagata 287  Q
    |||||||| ||||||||||| ||||||||||||||||| || ||||||    
T  11992113 aggtatgcagtggtgacaggtgcaaacaaaggaattgggttagagata 11992066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 3043299 - 3043245
Alignment:
Q  123 aatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcct 177  Q
    ||||| || |||||||||| || | ||| ||||||||||||||||||||||||||    
T  3043299 aatggttaggatttggtgtcaatgaatttgttgacaccaggtgtcaacggatcct 3043245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 3165126 - 3165184
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    |||||||||| |||| || |||||||||| | |||||||||||||||||| ||||||||    
T  3165126 gatttggtgtcaacgaatccgttgacacctgatgtcaacggatcctgactcatatatat 3165184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 287
Target Start/End: Complemental strand, 11980240 - 11980202
Alignment:
Q  249 gtggtgacaggagcaaacaaaggaattggatttgagata 287  Q
    |||||||||||| ||||||||||||||||||| ||||||    
T  11980240 gtggtgacaggatcaaacaaaggaattggattagagata 11980202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 287
Target Start/End: Complemental strand, 11984597 - 11984559
Alignment:
Q  249 gtggtgacaggagcaaacaaaggaattggatttgagata 287  Q
    |||||||| |||||||||||||||||||| |||||||||    
T  11984597 gtggtgactggagcaaacaaaggaattgggtttgagata 11984559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 186
Target Start/End: Complemental strand, 31602064 - 31602010
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatata 186  Q
    |||||||||| |||| ||||||||||||| ||||||||| |||||| ||| ||||    
T  31602064 gatttggtgtcaacgaattcgttgacacctggtgtcaaccgatcctaactctata 31602010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 31642091 - 31642149
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    |||||||||| |||| ||||||||||| | |||||||| ||||||||||| ||||||||    
T  31642091 gatttggtgtcaacgaattcgttgacatctggtgtcaatggatcctgactcatatatat 31642149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 38576306 - 38576364
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    |||||||||| |||| || |||||||||| |||||||||||||||| ||| ||||||||    
T  38576306 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctaactcatatatat 38576364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 3043970 - 3044014
Alignment:
Q  133 atttggtgttaacggattcgttgacaccaggtgtcaacggatcct 177  Q
    ||||||||| |||| ||||||||||||| |||||| |||||||||    
T  3043970 atttggtgtcaacgaattcgttgacacctggtgtcgacggatcct 3044014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 8373698 - 8373746
Alignment:
Q  133 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 181  Q
    ||||||||| |||| || |||||||||  ||||||||||||||||||||    
T  8373698 atttggtgtcaacgaatccgttgacacttggtgtcaacggatcctgact 8373746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 239 - 287
Target Start/End: Complemental strand, 12004999 - 12004951
Alignment:
Q  239 caggtatgcggtggtgacaggagcaaacaaaggaattggatttgagata 287  Q
    ||||||||| |||||||| ||| | ||||||||||||||||| ||||||    
T  12004999 caggtatgcagtggtgactggatcgaacaaaggaattggattagagata 12004951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 138; Significance: 6e-72; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 7 - 168
Target Start/End: Complemental strand, 1553580 - 1553419
Alignment:
Q  7 tttggtggttagcgcaaaggagaaggtgtgagtgtgcaaattaggggggattaagtggagaacggttcacgtgagttaatttcacagtaattaggaccct 106  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  1553580 tttggtggttagcgcaaaggagaaggtgtgagagtgcagattaggggggatcaagtggagaacggttcacgtgagttaatttcacagtaattagaaccct 1553481  T
Q  107 tggattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtca 168  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  1553480 tggattaaacataataaatggctatgatttggtgttaacggattcgttgacacctggtgtca 1553419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 75 - 177
Target Start/End: Original strand, 1554030 - 1554132
Alignment:
Q  75 acgtgagttaatttcacagtaattaggacccttggattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggat 174  Q
    |||||||||||||| ||| ||||  ||||||||||||||||  || ||||||| || |||||||||| |||| ||||||||||||| |||||||||||||    
T  1554030 acgtgagttaattttacaataatcgggacccttggattaaatgtattaaatggttaagatttggtgtcaacgaattcgttgacacctggtgtcaacggat 1554129  T
Q  175 cct 177  Q
    |||    
T  1554130 cct 1554132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 4084927 - 4084870
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||    
T  4084927 gatttggtgtcaacgaattcgttgacaccaggtgtcaacggatcctgactctatatat 4084870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 29046076 - 29046019
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    |||||||||| |||| || |||||||||| |||||||||||||||||||| |||||||    
T  29046076 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactctatatat 29046019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 234747 - 234691
Alignment:
Q  133 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    ||||||||| |||| || |||||||||| |||||||||||||||||||| |||||||    
T  234747 atttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactctatatat 234691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 14478967 - 14478911
Alignment:
Q  133 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    ||||||||| |||| || |||||||||| | ||||||||||||||||||||||||||    
T  14478967 atttggtgtcaacgaatccgttgacacctgatgtcaacggatcctgactatatatat 14478911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 109 - 189
Target Start/End: Original strand, 17071775 - 17071855
Alignment:
Q  109 gattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    ||||||| | |||||| || | ||||||||||| |||| ||||||| ||||| |||||||||||||||| ||| |||||||    
T  17071775 gattaaataaaataaacggttgcgatttggtgtcaacgaattcgttaacacctggtgtcaacggatcctaactctatatat 17071855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 19128839 - 19128759
Alignment:
Q  110 attaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    |||||| | |||||| || || |||||||||| |||| || |||||||||| |||||||||||||||||||| ||||||||    
T  19128839 attaaataaaataaacggttaagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcatatatat 19128759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 19360481 - 19360529
Alignment:
Q  133 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 181  Q
    ||||||||| |||| ||||||||||||| ||||||||||||||||||||    
T  19360481 atttggtgtcaacgaattcgttgacacctggtgtcaacggatcctgact 19360529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 119 - 177
Target Start/End: Complemental strand, 7632155 - 7632097
Alignment:
Q  119 aataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcct 177  Q
    ||||||||| || |||||||||| |||| || |||||||||| ||||||||||||||||    
T  7632155 aataaatggataagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 7632097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 252 - 306
Target Start/End: Original strand, 25858947 - 25859001
Alignment:
Q  252 gtgacaggagcaaacaaaggaattggatttgagatatgcaagcaattggcttcta 306  Q
    ||||||||||||||||  |||||||||||||  |||||||||||||||| |||||    
T  25858947 gtgacaggagcaaacaggggaattggatttgcaatatgcaagcaattggtttcta 25859001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 237826 - 237883
Alignment:
Q  133 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    ||||||||| |||| || |||||||||| |||||||||||||||||||| ||||||||    
T  237826 atttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcatatatat 237883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 137 - 174
Target Start/End: Complemental strand, 1283557 - 1283520
Alignment:
Q  137 ggtgttaacggattcgttgacaccaggtgtcaacggat 174  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  1283557 ggtgtcaacggattcgttgacaccaggtgtcaacggat 1283520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 137 - 174
Target Start/End: Original strand, 10554541 - 10554578
Alignment:
Q  137 ggtgttaacggattcgttgacaccaggtgtcaacggat 174  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  10554541 ggtgtcaacggattcgttgacaccaggtgtcaacggat 10554578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 13306273 - 13306322
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 181  Q
    |||||| ||| |||| ||||||||||| ||||||||||||||||||||||    
T  13306273 gatttgatgtcaacgaattcgttgacatcaggtgtcaacggatcctgact 13306322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 19359750 - 19359693
Alignment:
Q  133 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    ||||||||| |||| || |||||||||| |||||||||||||||||||| ||||||||    
T  19359750 atttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcatatatat 19359693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 29087972 - 29087915
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    |||||||||| || | || |||||||||| |||||||||||||||||||| |||||||    
T  29087972 gatttggtgtcaatgaatccgttgacacctggtgtcaacggatcctgactctatatat 29087915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 181
Target Start/End: Complemental strand, 31082029 - 31081997
Alignment:
Q  149 ttcgttgacaccaggtgtcaacggatcctgact 181  Q
    |||||||||||||||||||||||||||||||||    
T  31082029 ttcgttgacaccaggtgtcaacggatcctgact 31081997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 189
Target Start/End: Complemental strand, 17071296 - 17071213
Alignment:
Q  107 tggattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    ||||||||| | |||||| || |  |||||||||| |||| ||||||||||||| | |||||||||||||| ||| ||||||||    
T  17071296 tggattaaataaaataaacggttgagatttggtgtcaacgaattcgttgacacctgatgtcaacggatcctaactcatatatat 17071213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 189
Target Start/End: Complemental strand, 34600333 - 34600250
Alignment:
Q  107 tggattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgac-tatatatat 189  Q
    ||||||||| | |||||| || |  |||||||||| |||| ||||||||||||| | |||||||||||||| || |||||||||    
T  34600333 tggattaaataaaataaacggttgagatttggtgtcaacgaattcgttgacacctgatgtcaacggatcctaacttatatatat 34600250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 6476795 - 6476841
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctg 178  Q
    |||||||||| |||| || |||||||||| |||||||||||||||||    
T  6476795 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctg 6476841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 22799764 - 22799822
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgac-tatatatat 189  Q
    |||||||||| |||| |||| |||||||| ||||||||||||| ||||| |||||||||    
T  22799764 gatttggtgtcaacgaattcattgacacctggtgtcaacggattctgacttatatatat 22799822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 28705212 - 28705154
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    |||||||||| |||| || |||||||||| ||||||||||||| |||||| ||||||||    
T  28705212 gatttggtgtaaacgaatccgttgacacctggtgtcaacggatactgactcatatatat 28705154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 28705883 - 28705941
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    ||||| |||| |||| || |||||||||| |||||||||||||||||||| ||||||||    
T  28705883 gatttagtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcatatatat 28705941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 33471093 - 33471150
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    |||||| ||| |||| ||||||||||||  ||||||||| |||||| |||||||||||    
T  33471093 gatttgttgtcaacgaattcgttgacacgtggtgtcaacagatcctaactatatatat 33471150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 109 - 177
Target Start/End: Original strand, 34600812 - 34600880
Alignment:
Q  109 gattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcct 177  Q
    ||||||| | |||||| || | ||||||||||| |||| ||||||| ||||| |||||||| |||||||    
T  34600812 gattaaataaaataaacggttgcgatttggtgtcaacgaattcgttaacacctggtgtcaagggatcct 34600880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 36038742 - 36038698
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcc 176  Q
    ||||||||||||||| || |||||| ||| |||||||||||||||    
T  36038742 gatttggtgttaacgaatccgttgatacctggtgtcaacggatcc 36038698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 43510278 - 43510234
Alignment:
Q  133 atttggtgttaacggattcgttgacaccaggtgtcaacggatcct 177  Q
    |||||||||||||| ||  ||||||||| ||||||||||||||||    
T  43510278 atttggtgttaacgaatctgttgacacctggtgtcaacggatcct 43510234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 64; Significance: 8e-28; HSPs: 4)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 62 - 165
Target Start/End: Original strand, 16581 - 16684
Alignment:
Q  62 tggagaacggttcacgtgagttaatttcacagtaattaggacccttggattaaacataataaatggctacgatttggtgttaacggattcgttgacacca 161  Q
    ||||||| ||||||||||||||||||||||| |||||| |||||||||||||||  || |||||||||| ||||||||||||||  || |||||||||||    
T  16581 tggagaaaggttcacgtgagttaatttcacaataattatgacccttggattaaatgtattaaatggctaagatttggtgttaacaaatccgttgacacca 16680  T
Q  162 ggtg 165  Q
    ||||    
T  16681 ggtg 16684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 22076 - 22132
Alignment:
Q  133 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    ||||||||| |||| || |||||||||| ||||||||||||||||| || |||||||    
T  22076 atttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgtctctatatat 22132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 15070 - 15021
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 181  Q
    |||||||||| || | || ||||||||| |||||||||||||||||||||    
T  15070 gatttggtgtcaatgaatccgttgacactaggtgtcaacggatcctgact 15021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 15129 - 15080
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 181  Q
    |||||||||| || | || ||||||||| |||||||||||||||||||||    
T  15129 gatttggtgtcaatgaatccgttgacactaggtgtcaacggatcctgact 15080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 8e-25; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 7 - 141
Target Start/End: Original strand, 982324 - 982457
Alignment:
Q  7 tttggtggttagcgcaaaggagaaggtgtgagtgtgcaaattaggggggattaagtggagaacggttcacgtgagttaatttcacagtaattaggaccct 106  Q
    |||| ||||||| | ||||||||| | | ||||||||| |||||| ||||| || |||||||  |||||||||||||||||||||| |||||| ||||||    
T  982324 tttgttggttagaggaaaggagaacgag-gagtgtgcagattaggagggatcaaatggagaaaagttcacgtgagttaatttcacaataattatgaccct 982422  T
Q  107 tggattaaacataataaatggctacgatttggtgt 141  Q
    |||||||||  || |||||||||| ||||||||||    
T  982423 tggattaaatgtattaaatggctaagatttggtgt 982457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 77 - 146
Target Start/End: Complemental strand, 35718479 - 35718410
Alignment:
Q  77 gtgagttaatttcacagtaattaggacccttggattaaacataataaatggctacgatttggtgttaacg 146  Q
    |||||||||||||||| ||||||||||  |||||||||||||| |||||||||| |||||||||| ||||    
T  35718479 gtgagttaatttcacaataattaggacatttggattaaacatattaaatggctaagatttggtgtcaacg 35718410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 10847339 - 10847290
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 181  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  10847339 gatttagtgttaacgaattcgttgacaccaggtgtcaacggatcctgact 10847290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 33277509 - 33277566
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    ||||||||||||||| ||||||||||||| ||||||||||||| |||||| |||||||    
T  33277509 gatttggtgttaacgaattcgttgacacctggtgtcaacggattctgactctatatat 33277566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 14871201 - 14871152
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 181  Q
    |||||||||| |||| ||||||||||||| ||||||||||||||||||||    
T  14871201 gatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctgact 14871152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 20213536 - 20213593
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    |||||||||| |||| |||||| |||||| |||||||||||||||||||| |||||||    
T  20213536 gatttggtgtcaacgaattcgtcgacacctggtgtcaacggatcctgactctatatat 20213593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 51827499 - 51827556
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    |||||||||  |||| || ||||||||||||||||||||||||| |||||||||||||    
T  51827499 gatttggtgacaacgaatccgttgacaccaggtgtcaacggatcttgactatatatat 51827556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 123 - 189
Target Start/End: Complemental strand, 13477114 - 13477047
Alignment:
Q  123 aatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    ||||| || |||||||||| || | ||||||||||||| |||||||||||||||||||| ||||||||    
T  13477114 aatggttaggatttggtgtcaatgaattcgttgacacctggtgtcaacggatcctgactcatatatat 13477047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 78 - 149
Target Start/End: Original strand, 35719158 - 35719228
Alignment:
Q  78 tgagttaatttcacagtaattaggacccttggattaaacataataaatggctacgatttggtgttaacggat 149  Q
    ||||||||||||||| |||||||||||||| | |||||||| || |||||||| |||||| ||| |||||||    
T  35719158 tgagttaatttcacaataattaggaccctttgtttaaacat-attaatggctaagatttgatgtcaacggat 35719228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 123 - 189
Target Start/End: Original strand, 37988214 - 37988281
Alignment:
Q  123 aatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    |||||||  |||||||||| |||| ||||||||||||| |||||||| ||||||||||| ||||||||    
T  37988214 aatggctgagatttggtgtcaacgaattcgttgacacctggtgtcaatggatcctgactcatatatat 37988281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 20213028 - 20212970
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    |||||||||| |||| ||||||||||||| ||||||||||||| |||||| ||||||||    
T  20213028 gatttggtgtcaacgaattcgttgacacctggtgtcaacggattctgactcatatatat 20212970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 45081395 - 45081457
Alignment:
Q  119 aataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 181  Q
    ||||||||| |  |||||||||| |||| || ||||||||| |||||||||||||||||||||    
T  45081395 aataaatggttgagatttggtgtcaacgaatccgttgacactaggtgtcaacggatcctgact 45081457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 48648251 - 48648193
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    |||||||||| |||| || |||||||||| |||||||||||||||||||| ||||||||    
T  48648251 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcatatatat 48648193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 44029774 - 44029823
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 181  Q
    ||||| || |||||| ||||||||||||||| ||||||||||||||||||    
T  44029774 gatttagtattaacgaattcgttgacaccagatgtcaacggatcctgact 44029823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 48765075 - 48765132
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    |||||||||| |||| || | |||||||| |||||||| |||||||||||||||||||    
T  48765075 gatttggtgtcaacgaatccattgacacctggtgtcaatggatcctgactatatatat 48765132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 132 - 188
Target Start/End: Original strand, 265103 - 265159
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatata 188  Q
    |||||||||| |||| || |||||||||| |||||||||||||| |||||| |||||    
T  265103 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcatgactacatata 265159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 94 - 189
Target Start/End: Complemental strand, 33276978 - 33276882
Alignment:
Q  94 taattaggacccttggattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    ||||| ||||| || |||||||   |||||||||||| |||||||||| |||| || | |||||||||| ||| ||| |||||||||| ||||||||    
T  33276978 taatttggaccattagattaaaagaaataaatggctaggatttggtgtcaacgaatccattgacaccagatgttaacagatcctgactcatatatat 33276882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 37520566 - 37520614
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgac 180  Q
    |||||||||| |||| ||||||||||||| ||| |||||||||||||||    
T  37520566 gatttggtgtcaacgaattcgttgacacctggtatcaacggatcctgac 37520614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 44699812 - 44699880
Alignment:
Q  119 aataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatat 187  Q
    ||||||||| ||  ||||||||| |||| || |||||||||| ||||||| | ||||||||||||||||    
T  44699812 aataaatggttaatatttggtgtcaacgaatccgttgacacctggtgtcagctgatcctgactatatat 44699880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 46150721 - 46150789
Alignment:
Q  119 aataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatat 187  Q
    ||||||||| |  |||||||||| |||| || ||||||||||  ||||||||||||||||||| |||||    
T  46150721 aataaatggttgagatttggtgtcaacgaatccgttgacacctagtgtcaacggatcctgactctatat 46150789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 92 - 189
Target Start/End: Complemental strand, 8950024 - 8949925
Alignment:
Q  92 agtaattaggacccttggattaaacata-ataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgac-tatatatat 189  Q
    |||||||| || |||| ||||||| ||| ||  |||| || ||||| |||| |||||||||||||||||  |||||||||||||||| || |||||||||    
T  8950024 agtaattatgagcctttgattaaaaatagatggatggttaagattttgtgtcaacggattcgttgacacatggtgtcaacggatcctaacttatatatat 8949925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 189
Target Start/End: Original strand, 10847876 - 10847971
Alignment:
Q  94 taattaggacccttggattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    ||||| ||||| || |||||||   |||||||||||| |||||||||| || | ||  ||||||||| ||||| |||||||| ||| |||||||||    
T  10847876 taatttggaccattagattaaaagaaataaatggctaggatttggtgtcaatgaatctgttgacacctggtgttaacggatcttgattatatatat 10847971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 174
Target Start/End: Complemental strand, 981715 - 981673
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggat 174  Q
    |||||||||| |||| ||||||||||||| |||||||||||||    
T  981715 gatttggtgtcaacgaattcgttgacacctggtgtcaacggat 981673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 21727534 - 21727580
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctg 178  Q
    |||||||||| |||| || |||||||||| |||||||||||||||||    
T  21727534 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctg 21727580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 27082824 - 27082766
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    |||||||||| |||| |||||||||||||  ||||||| ||||||||||| ||||||||    
T  27082824 gatttggtgtcaacgaattcgttgacacctagtgtcaatggatcctgactcatatatat 27082766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 48507037 - 48507083
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctg 178  Q
    |||||||||| |||| |||| |||||||| |||||||||||||||||    
T  48507037 gatttggtgtcaacgaattcattgacacctggtgtcaacggatcctg 48507083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 48764525 - 48764467
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    |||||||||| |||| ||||||||||||| | |||||| ||||||||||| ||||||||    
T  48764525 gatttggtgtcaacgaattcgttgacacctgatgtcaatggatcctgactcatatatat 48764467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 17603216 - 17603171
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcct 177  Q
    |||||||||| |||| || |||||||||| ||||||||||||||||    
T  17603216 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 17603171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 52266458 - 52266507
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 181  Q
    |||||||||| |||| ||||||| ||||| ||||| ||||||||||||||    
T  52266458 gatttggtgtcaacgaattcgttaacacctggtgttaacggatcctgact 52266507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 181
Target Start/End: Original strand, 52605504 - 52605537
Alignment:
Q  148 attcgttgacaccaggtgtcaacggatcctgact 181  Q
    ||||||||||||| ||||||||||||||||||||    
T  52605504 attcgttgacacctggtgtcaacggatcctgact 52605537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 54458670 - 54458715
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcct 177  Q
    |||||||||| |||  || |||||||||||||||||||||||||||    
T  54458670 gatttggtgtcaaccaatccgttgacaccaggtgtcaacggatcct 54458715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 40872814 - 40872870
Alignment:
Q  133 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    ||||||||| || | || |||||||||| |||||||||||||| | |||||||||||    
T  40872814 atttggtgtcaatgaatccgttgacacctggtgtcaacggatcttaactatatatat 40872870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 181
Target Start/End: Complemental strand, 52281845 - 52281765
Alignment:
Q  101 gacccttggattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 181  Q
    |||| |||||| ||||| ||||| ||| |  ||| |||||| |||| || |||||||||||||| ||||||||| ||||||    
T  52281845 gaccattggatcaaacaaaataagtggttgagatctggtgtcaacgaatccgttgacaccaggtatcaacggattctgact 52281765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 146 - 174
Target Start/End: Complemental strand, 55373755 - 55373727
Alignment:
Q  146 ggattcgttgacaccaggtgtcaacggat 174  Q
    |||||||||||||||||||||||||||||    
T  55373755 ggattcgttgacaccaggtgtcaacggat 55373727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 8e-22; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 37852570 - 37852513
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  37852570 gatttggtgttaacgaattcgttgacaccaggtgtcaacggatcctgactatatatat 37852513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 28181580 - 28181523
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    |||||||||| |||| |||||||||||||||||||||||||||||| |||||||||||    
T  28181580 gatttggtgtcaacgaattcgttgacaccaggtgtcaacggatcctcactatatatat 28181523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 12760823 - 12760765
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    |||||| |||||||| |||||||||||||||||||||||||||||| ||| ||||||||    
T  12760823 gatttgatgttaacgaattcgttgacaccaggtgtcaacggatcctaactcatatatat 12760765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 123 - 181
Target Start/End: Complemental strand, 25671226 - 25671168
Alignment:
Q  123 aatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 181  Q
    ||||| || ||||||||||||||| || |||| ||||||||||||||||||||||||||    
T  25671226 aatggttaggatttggtgttaacgaatccgttaacaccaggtgtcaacggatcctgact 25671168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 151 - 189
Target Start/End: Complemental strand, 36389803 - 36389765
Alignment:
Q  151 cgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    |||||||||||||||||||||||||||||||||||||||    
T  36389803 cgttgacaccaggtgtcaacggatcctgactatatatat 36389765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 36390372 - 36390430
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    |||||||||| |||||||||||||||||| |||||||||||||||| ||| ||||||||    
T  36390372 gatttggtgtcaacggattcgttgacacctggtgtcaacggatcctaactcatatatat 36390430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 12761501 - 12761558
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    ||||||||||||||| ||||||||||||| |||| ||| ||||||| |||||||||||    
T  12761501 gatttggtgttaacgaattcgttgacacctggtgccaatggatcctaactatatatat 12761558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 25469091 - 25469148
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    |||||||||| |||| || |||||||||| |||||||||||||||||||| |||||||    
T  25469091 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactctatatat 25469148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 30663981 - 30664030
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 181  Q
    |||||||||| |||| || |||||||||||||||||||||||||||||||    
T  30663981 gatttggtgtcaacgaatccgttgacaccaggtgtcaacggatcctgact 30664030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 7406292 - 7406234
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    |||||||||| |||| ||||||| ||||| |||||||||||||||||||| ||||||||    
T  7406292 gatttggtgtcaacgaattcgttaacacctggtgtcaacggatcctgactcatatatat 7406234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 7559204 - 7559250
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctg 178  Q
    |||||||||| ||||||| |||||||||| |||||||||||||||||    
T  7559204 gatttggtgtcaacggatccgttgacacctggtgtcaacggatcctg 7559250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 4439211 - 4439256
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcct 177  Q
    |||||||||| |||| || |||||||||||||||||||||||||||    
T  4439211 gatttggtgtcaacgaatccgttgacaccaggtgtcaacggatcct 4439256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 13262880 - 13262835
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcct 177  Q
    |||||||||| |||| ||||||||||||| ||||||||||||||||    
T  13262880 gatttggtgtcaacgaattcgttgacacctggtgtcaacggatcct 13262835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 49681678 - 49681735
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    |||||||||| |||||||||||||| | | ||||||||||||||||| || |||||||    
T  49681678 gatttggtgtcaacggattcgttgatatctggtgtcaacggatcctgtctctatatat 49681735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 17171977 - 17171933
Alignment:
Q  133 atttggtgttaacggattcgttgacaccaggtgtcaacggatcct 177  Q
    ||||||||| |||| ||||||||||||| ||||||||||||||||    
T  17171977 atttggtgtcaacgaattcgttgacacctggtgtcaacggatcct 17171933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 36689071 - 36689127
Alignment:
Q  133 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    |||| |||| |||||||||||| ||||| |||||||| | |||||||||||||||||    
T  36689071 attttgtgtcaacggattcgttaacacctggtgtcaatgaatcctgactatatatat 36689127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 36705171 - 36705227
Alignment:
Q  133 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    |||| |||| |||||||||||| ||||| |||||||| | |||||||||||||||||    
T  36705171 attttgtgtcaacggattcgttaacacctggtgtcaatgaatcctgactatatatat 36705227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 94 - 189
Target Start/End: Original strand, 37853102 - 37853198
Alignment:
Q  94 taattaggacccttggattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    ||||| ||||| || |||||||   ||||||||||||  ||||||||| |||| || |||||||||| | ||| |||||||||||||| ||||||||    
T  37853102 taatttggaccattagattaaaagaaataaatggctaaaatttggtgtcaacgaatccgttgacacctgatgttaacggatcctgactcatatatat 37853198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 181
Target Start/End: Original strand, 9778996 - 9779026
Alignment:
Q  151 cgttgacaccaggtgtcaacggatcctgact 181  Q
    |||||||||||||||||||||||||||||||    
T  9778996 cgttgacaccaggtgtcaacggatcctgact 9779026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 19172580 - 19172638
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    |||||||||| |||| || |||||||||| |||||||| ||||||||||| ||||||||    
T  19172580 gatttggtgtcaacgaatccgttgacacctggtgtcaatggatcctgactcatatatat 19172638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 189
Target Start/End: Complemental strand, 26118701 - 26118663
Alignment:
Q  151 cgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    |||||||| | ||||||||||||||||||||||||||||    
T  26118701 cgttgacatctggtgtcaacggatcctgactatatatat 26118663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 34309235 - 34309281
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctg 178  Q
    |||||||||| |||| || |||||||||| |||||||||||||||||    
T  34309235 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctg 34309281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 49680858 - 49680800
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    |||||||||| |||| || |||||||||| |||||||||||||||| ||| ||||||||    
T  49680858 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctaactcatatatat 49680800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 4433852 - 4433897
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcct 177  Q
    |||||||||| |||| || |||||||||| ||||||||||||||||    
T  4433852 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 4433897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 13263521 - 13263570
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 181  Q
    |||||||||| |||| || | |||||||| ||||||||||||||||||||    
T  13263521 gatttggtgtcaacgaatccattgacacctggtgtcaacggatcctgact 13263570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 27256718 - 27256763
Alignment:
Q  133 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctg 178  Q
    ||||||||| |||| || |||||||||| |||||||||||||||||    
T  27256718 atttggtgtcaacgaatacgttgacacctggtgtcaacggatcctg 27256763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 30663405 - 30663356
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 181  Q
    |||||||||| |||| || |||||| ||| ||||||||||||||||||||    
T  30663405 gatttggtgtcaacgaatccgttgatacctggtgtcaacggatcctgact 30663356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 30932800 - 30932857
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    |||||||||  |||| || |||||||||| |||||||||||||||| ||| |||||||    
T  30932800 gatttggtgccaacgaatccgttgacacctggtgtcaacggatcctcactctatatat 30932857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 34308519 - 34308474
Alignment:
Q  133 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctg 178  Q
    ||||||||| |||| || |||||||||| |||||||||||||||||    
T  34308519 atttggtgtcaacgaatacgttgacacctggtgtcaacggatcctg 34308474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 46909387 - 46909424
Alignment:
Q  152 gttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    ||||||| | ||||||||||||||||||||||||||||    
T  46909387 gttgacatctggtgtcaacggatcctgactatatatat 46909424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 50271788 - 50271837
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 181  Q
    |||||||||| |||| |||| |||| ||| ||||||||||||||||||||    
T  50271788 gatttggtgtcaacgaattcattgatacctggtgtcaacggatcctgact 50271837  T

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Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 20833972 - 20834028
Alignment:
Q  133 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    ||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||    
T  20833972 atttggtgtcaacggattcgttaacacctggtgtcaacggatcctgactatatatat 20834028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 8489284 - 8489333
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 181  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  8489284 gatttggtgttaacgaattcgttgacacctggtgtcaacggatcctgact 8489333  T

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Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 26529517 - 26529574
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    |||||||||| |||| || |||||||||| |||||||||||||||||||| |||||||    
T  26529517 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactctatatat 26529574  T

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Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 33436278 - 33436335
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    |||||||||| |||| || |||||||| | ||||||||||||||||||||||||||||    
T  33436278 gatttggtgtcaacgaatccgttgacatctggtgtcaacggatcctgactatatatat 33436335  T

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Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 132 - 188
Target Start/End: Original strand, 19311831 - 19311887
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatata 188  Q
    |||||||||| |||| || |||||||||| |||||||||| ||||||||||||||||    
T  19311831 gatttggtgtcaacgaatccgttgacacctggtgtcaacgaatcctgactatatata 19311887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 10171323 - 10171265
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    |||||||||| |||| || |||||||||| |||||||||||||||||||| ||||||||    
T  10171323 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcatatatat 10171265  T

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Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 19323771 - 19323817
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctg 178  Q
    |||||||||| |||| ||||||||||||| |||||||||||||||||    
T  19323771 gatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctg 19323817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 2512484 - 2512439
Alignment:
Q  133 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctg 178  Q
    ||||||||| |||| ||||||||||| |||||||||||||||||||    
T  2512484 atttggtgtcaacgaattcgttgacatcaggtgtcaacggatcctg 2512439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 10171970 - 10172027
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    |||||||||| |||| || |||||||||| |||||||||||||||| ||| |||||||    
T  10171970 gatttggtgtcaacgaatgcgttgacacctggtgtcaacggatcctaactctatatat 10172027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 146 - 176
Target Start/End: Original strand, 9441240 - 9441270
Alignment:
Q  146 ggattcgttgacaccaggtgtcaacggatcc 176  Q
    |||||||||||||||||||||||||||||||    
T  9441240 ggattcgttgacaccaggtgtcaacggatcc 9441270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 26528870 - 26528812
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    |||||||||| |||| || |||||||||| |||||||||||||||| ||| ||||||||    
T  26528870 gatttggtgtcaacgaatgcgttgacacctggtgtcaacggatcctaactcatatatat 26528812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 33435387 - 33435329
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    |||||||||| |||| || |||| |||||||||||||||||||||| ||| ||||||||    
T  33435387 gatttggtgtcaacgaatccgttaacaccaggtgtcaacggatcctaactcatatatat 33435329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 189
Target Start/End: Original strand, 21133208 - 21133289
Alignment:
Q  109 gattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    ||||||| | |||||| || || |||||||||| |||| ||||||| ||||  |||||||||||||||| ||| ||||||||    
T  21133208 gattaaataaaataaacggttaagatttggtgtcaacgaattcgttaacacatggtgtcaacggatcctaactcatatatat 21133289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 109 - 177
Target Start/End: Original strand, 3623728 - 3623796
Alignment:
Q  109 gattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcct 177  Q
    ||||||| | |||||| || | ||||||||||| |||| ||||||| ||| | ||||||||||||||||    
T  3623728 gattaaataaaataaacggttgcgatttggtgtcaacgaattcgttaacatctggtgtcaacggatcct 3623796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 146 - 174
Target Start/End: Complemental strand, 19311875 - 19311847
Alignment:
Q  146 ggattcgttgacaccaggtgtcaacggat 174  Q
    |||||||||||||||||||||||||||||    
T  19311875 ggattcgttgacaccaggtgtcaacggat 19311847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 123 - 189
Target Start/End: Original strand, 31329713 - 31329780
Alignment:
Q  123 aatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    ||||| || ||||||||||||||| || |||||||||| |||||||||||||||||||| ||||||||    
T  31329713 aatggttaggatttggtgttaacgaatccgttgacacctggtgtcaacggatcctgactcatatatat 31329780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 44469540 - 44469483
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    |||||||||| |||| ||||||||||||| ||||||| |||||| |||||||||||||    
T  44469540 gatttggtgtcaacgaattcgttgacacctggtgtcatcggatcatgactatatatat 44469483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 44792641 - 44792690
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 181  Q
    ||||||||||||||| ||||||||||||| |||||||| |||||||||||    
T  44792641 gatttggtgttaacgaattcgttgacacctggtgtcaatggatcctgact 44792690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 26147037 - 26147095
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    |||||||||| |||| ||||||||||||| |||||||||||||||| ||| ||||||||    
T  26147037 gatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctaactcatatatat 26147095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 40347602 - 40347556
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctg 178  Q
    |||||||||| |||||||||||||||||| |||||||| ||||||||    
T  40347602 gatttggtgtaaacggattcgttgacacctggtgtcaatggatcctg 40347556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 189
Target Start/End: Original strand, 47688459 - 47688541
Alignment:
Q  107 tggattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    ||||||||| | |||||| || |  |||||||||| |||| || |||||||||| |||||||||||||||| ||| |||||||    
T  47688459 tggattaaataaaataaacggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctaactctatatat 47688541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 598573 - 598524
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 181  Q
    ||||||||||||||| ||||||||||| | ||||||||| ||||||||||    
T  598573 gatttggtgttaacgaattcgttgacatctggtgtcaacagatcctgact 598524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 599306 - 599351
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcct 177  Q
    |||||||||| |||| || |||||||||||||||||||||||||||    
T  599306 gatttggtgtcaacgaatccgttgacaccaggtgtcaacggatcct 599351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 8247744 - 8247695
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 181  Q
    ||||| |||| |||| || |||||||||||||||||||||||||||||||    
T  8247744 gattttgtgtcaacgaatccgttgacaccaggtgtcaacggatcctgact 8247695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 11939446 - 11939503
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    ||||| |||| |||| || ||||||||| ||||||||||||||||| |||||||||||    
T  11939446 gatttcgtgtcaacgaatccgttgacactaggtgtcaacggatcctaactatatatat 11939503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 137 - 174
Target Start/End: Complemental strand, 16903701 - 16903664
Alignment:
Q  137 ggtgttaacggattcgttgacaccaggtgtcaacggat 174  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  16903701 ggtgtcaacggattcgttgacaccaggtgtcaacggat 16903664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 24374837 - 24374788
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 181  Q
    |||||||||| |||| ||||||||||| | ||||||||||||||||||||    
T  24374837 gatttggtgtcaacgaattcgttgacagctggtgtcaacggatcctgact 24374788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 30573714 - 30573771
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    |||||||||| |||| || |||||||||| |||||||| ||||||||||| |||||||    
T  30573714 gatttggtgtcaacgaatccgttgacacctggtgtcaatggatcctgactctatatat 30573771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 44791772 - 44791723
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 181  Q
    ||||||||||||||| ||||||||||||| |||| ||| |||||||||||    
T  44791772 gatttggtgttaacgaattcgttgacacctggtgccaatggatcctgact 44791723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 109 - 189
Target Start/End: Complemental strand, 47687980 - 47687899
Alignment:
Q  109 gattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    ||||||| | |||||| || | ||||||||||| |||| ||||||| ||||| |||||||||||||||| ||| ||||||||    
T  47687980 gattaaataaaataaacggttgcgatttggtgtcaacgaattcgttaacacctggtgtcaacggatcctaactcatatatat 47687899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 101 - 181
Target Start/End: Complemental strand, 9365248 - 9365168
Alignment:
Q  101 gacccttggattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 181  Q
    |||| |||||| ||||| ||||| ||| |  |||||||||| |||  ||||||||||||| ||||| ||||||||||||||    
T  9365248 gaccattggatcaaacaaaataagtggttgagatttggtgtcaacaaattcgttgacacctggtgttaacggatcctgact 9365168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 134 - 189
Target Start/End: Complemental strand, 40495141 - 40495085
Alignment:
Q  134 tttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    |||||||| |||| ||| ||||||||| |||||||||||||||||||| ||||||||    
T  40495141 tttggtgtcaacgaatttgttgacacctggtgtcaacggatcctgactcatatatat 40495085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 53772854 - 53772798
Alignment:
Q  133 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    ||||||||| |||| || |||||||||| |||||||||||||||| ||| |||||||    
T  53772854 atttggtgtcaacgaatccgttgacacctggtgtcaacggatcctaactctatatat 53772798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 92 - 177
Target Start/End: Original strand, 142488 - 142574
Alignment:
Q  92 agtaattaggacccttggattaaacata-ataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcct 177  Q
    |||||||| || |||| ||||||| ||| ||  |||| || |||||||||| || | ||||||||||||| ||||||||||||||||    
T  142488 agtaattatgagcctttgattaaaaatagatggatggttaagatttggtgtcaatgaattcgttgacacccggtgtcaacggatcct 142574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 2446166 - 2446224
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    ||||||||||||||| ||  ||||||||| |||||||||||||||| ||| ||||||||    
T  2446166 gatttggtgttaacgaatctgttgacacctggtgtcaacggatcctaactcatatatat 2446224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 7841839 - 7841784
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    |||||||||| |||| ||||||||||||||  |||||||||||||| ||| |||||||    
T  7841839 gatttggtgtcaacgaattcgttgacacca--tgtcaacggatcctaactctatatat 7841784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 8248525 - 8248583
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    |||||||||| |||| || |||||||| | |||||||||||||||||||| ||||||||    
T  8248525 gatttggtgtcaacgaatccgttgacatctggtgtcaacggatcctgactcatatatat 8248583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 8266190 - 8266248
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    |||||||||| |||| || |||||||| | |||||||||||||||||||| ||||||||    
T  8266190 gatttggtgtcaacgaatccgttgacatctggtgtcaacggatcctgactcatatatat 8266248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 20774185 - 20774243
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    |||||||||| |||| || |||||||||| |||||||| ||||||||||| ||||||||    
T  20774185 gatttggtgtcaacgaatccgttgacacctggtgtcaatggatcctgactcatatatat 20774243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 56262526 - 56262480
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctg 178  Q
    |||||||||| |||| |||| |||||||| |||||||||||||||||    
T  56262526 gatttggtgtcaacgaattcattgacacctggtgtcaacggatcctg 56262480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 56263077 - 56263123
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctg 178  Q
    |||||||||| |||||||||||||||||| |||||||| ||| ||||    
T  56263077 gatttggtgtaaacggattcgttgacacctggtgtcaatggaacctg 56263123  T

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Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 1465348 - 1465311
Alignment:
Q  152 gttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    ||||||||| |||||||||||||||||||| |||||||    
T  1465348 gttgacacctggtgtcaacggatcctgactctatatat 1465311  T

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Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 2444419 - 2444375
Alignment:
Q  133 atttggtgttaacggattcgttgacaccaggtgtcaacggatcct 177  Q
    ||||||||| |||| || |||||||||| ||||||||||||||||    
T  2444419 atttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 2444375  T

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Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 8265409 - 8265365
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcc 176  Q
    ||||| |||| |||| || ||||||||||||||||||||||||||    
T  8265409 gattttgtgtcaacgaatccgttgacaccaggtgtcaacggatcc 8265365  T

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Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 146 - 174
Target Start/End: Complemental strand, 16903717 - 16903689
Alignment:
Q  146 ggattcgttgacaccaggtgtcaacggat 174  Q
    |||||||||||||||||||||||||||||    
T  16903717 ggattcgttgacaccaggtgtcaacggat 16903689  T

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Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 428906 - 428963
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    |||||||||| |||| ||||||||| ||| |||||||||||||||||||| |||||||    
T  428906 gatttggtgtcaacgaattcgttgataccgggtgtcaacggatcctgactctatatat 428963  T

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Target: scaffold0176 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 26639 - 26581
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    |||||||||| |||| || |||||||||| |||||||||||||||||||| ||||||||    
T  26639 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcatatatat 26581  T

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Target: scaffold1207 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold1207
Description:

Target: scaffold1207; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 1634 - 1577
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    |||||||||| |||| ||||||||||||| ||||||||| |||||||  |||||||||    
T  1634 gatttggtgtcaacgaattcgttgacacctggtgtcaaccgatcctgtatatatatat 1577  T

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Target: scaffold0418 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 134 - 189
Target Start/End: Original strand, 6891 - 6947
Alignment:
Q  134 tttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    |||||||| |||| ||| ||||||||| |||||||||||||||||||| ||||||||    
T  6891 tttggtgtcaacgaatttgttgacacctggtgtcaacggatcctgactcatatatat 6947  T

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Target: scaffold0086 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 8296 - 8354
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    ||||||||||||||| || |||||||||| |||||||| ||||||| ||| ||||||||    
T  8296 gatttggtgttaacgaatacgttgacacctggtgtcaatggatcctaactcatatatat 8354  T

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Target: scaffold0504 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 5385 - 5442
Alignment:
Q  133 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    ||||||||| |||  || |||||||||| |||||||||||||||||||| ||||||||    
T  5385 atttggtgtcaacaaatccgttgacacctggtgtcaacggatcctgactcatatatat 5442  T

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Target: scaffold0164 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0164
Description:

Target: scaffold0164; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 11718 - 11661
Alignment:
Q  132 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatat 189  Q
    |||||||||| |||  ||||||||| | | | ||||||||||||||||||||||||||    
T  11718 gatttggtgtcaactaattcgttgaaatctgatgtcaacggatcctgactatatatat 11661  T

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Target: scaffold0096 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 39942 - 39885
Alignment:
Q  133 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 189  Q
    ||||||||| |||| || |||||||||| ||||||||||||| |||||| ||||||||    
T  39942 atttggtgtcaacgaatccgttgacacctggtgtcaacggattctgactcatatatat 39885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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