View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7380_low_23 (Length: 378)
Name: NF7380_low_23
Description: NF7380
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7380_low_23 |
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Alignment Details
Target: chr7 (Bit Score: 340; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 340; E-Value: 0
Query Start/End: Original strand, 1 - 360
Target Start/End: Original strand, 40432458 - 40432817
Alignment:
| Q |
1 |
caaagacctattatcaaaaaacaattagcaatagatatgcttaacatcaaagaaggaaaattaatcatcctacgactaaatctagtcatgttgtccatta |
100 |
Q |
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| T |
40432458 |
caaagacctattatcaaaacacaattagcaatagatatgcttaacatcaaagaaggaaaattaatcatcctacgactaaatctagtcatgttgtccatta |
40432557 |
T |
|
| Q |
101 |
caacctttggagaaacaaaaatatcctagactatttgtaacatagggtcaatgtagcatagcaaaccatttgttagtgcagaatcagaagttaaagcggc |
200 |
Q |
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| T |
40432558 |
caacctttggagaaacaaaaatatcctagactatttgtaacatagggtcaatgtagcatagcaaaccatttgttagtgcagaatctgaagtcaaagcggc |
40432657 |
T |
|
| Q |
201 |
cttcaatatgttcaaacactgcaccaacaaaaccattagatataggcaataatgcattcaattattataccaaacacataacaatgcattggtgatagag |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40432658 |
cttcaatatgttcaaacactgcaccaacaaaaccattagaaataggcaataatgcattcaattattataccaaacacataacaatgcattggtgatagag |
40432757 |
T |
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| Q |
301 |
gttttgattttcttacctcttttagcccaaaagtgacggccttgttcttcaagtcattta |
360 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
40432758 |
gttttgattttcttacctcttttagcccaaaagtgacggccttgttcttcacgtcattta |
40432817 |
T |
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