View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7380_low_29 (Length: 347)
Name: NF7380_low_29
Description: NF7380
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7380_low_29 |
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Alignment Details
Target: chr7 (Bit Score: 325; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 1 - 333
Target Start/End: Complemental strand, 44676693 - 44676361
Alignment:
| Q |
1 |
atacgatatatatcccaaaatgttttccaaaaaagtgaacctgcttcaattgttacacttccacccacccctacactagagaccgagaaaatggttatgg |
100 |
Q |
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| T |
44676693 |
atacgatatatatcccaaaatgttttccaaaaaagtgaacctgcttcaattgttacacttccacccacccctacactagagaccgagaaaatggttatgg |
44676594 |
T |
|
| Q |
101 |
gctcagtaaatgggccttgttctagtggtgaaaataatgatattgaagctgattgtgaccgtatgtttggaccagatctgaaggtcattaatgatggtga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44676593 |
gctcagtaaatgggccttgttctagtggtgaaaataatgatattgaagctgattgtgaccgtatgtttggaccagatctgaaggtcattaatgatggtga |
44676494 |
T |
|
| Q |
201 |
gttgttagattttaatgatattatcatggatgctttggaggtggaagaggtaaaagaaagtaatgatgaaaatgtggctgtgattaatgaaagagtggtg |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |
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| T |
44676493 |
gttgttagattttaatgatattatcatggatgctttggaggtggaagaggtaaaagaaagtaatgatgaaaatgtggttgtgattaatgaaatagtggtg |
44676394 |
T |
|
| Q |
301 |
ggggacaaagacaccaacacaaatggaacaaag |
333 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
44676393 |
ggggacaaagacaccaacacaaatggaacaaag |
44676361 |
T |
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