View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7381_high_11 (Length: 229)
Name: NF7381_high_11
Description: NF7381
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7381_high_11 |
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Alignment Details
Target: chr1 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 18468502 - 18468727
Alignment:
| Q |
1 |
cagcaccactcatcgcaccactaggaaggccgccattacatatctaagaaggagtttggaaatagggagggttgtggcggcgataagcttttagagaggg |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
18468502 |
cagcaccactcatcgcaccactaggaaggccgccattacatatctaagaaggagtttggaaatagggagggttgtggcggcgagaagcttttagagaggg |
18468601 |
T |
|
| Q |
101 |
ttcaaatccccaattttcacccattgagctaacttttgggggttgagtttcctttagtttgtcaccatcaacccttaaatttgaacacctttatatttca |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
18468602 |
ttcaaatccccaattttcacccattgagctaacttttgggggttgagtttcctttagtttgtcaccatcaacccttaaatttgaacacctttatatttca |
18468701 |
T |
|
| Q |
201 |
tacattcatttaacacactattttct |
226 |
Q |
| |
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|||||||||||||||||||||||||| |
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| T |
18468702 |
tacattcatttaacacactattttct |
18468727 |
T |
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