View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7381_high_8 (Length: 275)
Name: NF7381_high_8
Description: NF7381
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7381_high_8 |
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Alignment Details
Target: chr1 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 18 - 270
Target Start/End: Original strand, 18467983 - 18468235
Alignment:
| Q |
18 |
acaaacaagaagctaaatgataatttcttgcctattcagaaccatattgaaccattaaaagccgcaacaacgaaccagccacacaaccaaagagaacaat |
117 |
Q |
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| T |
18467983 |
acaaacaagaaactaaatgacaatttcttgcctattcagaaccatattgaaccattaaaagccgcaacaacgaaccagccacacaaccaaagagaacaat |
18468082 |
T |
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| Q |
118 |
caagtgacaacctgaaactttaagaaatattgttataacaaccaaagcaaacaccaaaaccaccatgagttgagattcacgacggcactttgcctctttc |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
18468083 |
caagtgacaacctgaaactttaagaaatattgttataacaaccaaagcaaacaccaaaaccaccatgagttgagattcacgacggcactttgcctctttc |
18468182 |
T |
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| Q |
218 |
tatatttgaaaaccatccaatacaaccttcatcaacgcaatgaaccaccaaac |
270 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
18468183 |
tatatttgaaaaccatccaatacaaccttcgtcaacgcaatgaaccaccaaac |
18468235 |
T |
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