View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7382_high_9 (Length: 256)
Name: NF7382_high_9
Description: NF7382
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7382_high_9 |
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Alignment Details
Target: chr5 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 15 - 237
Target Start/End: Complemental strand, 6386487 - 6386262
Alignment:
| Q |
15 |
tggtggtgtgatttagttgatgcatgtgtaaaaaagttatacaatgtcaatacgtacaagttgaaaacttaatacatttaatttaaattcattaacgaat |
114 |
Q |
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| T |
6386487 |
tggtggtgtgatttaattgatgcatgtgtaaaaaagttatacaatatcaatacgcacaagttgaaaacttaatacatttaatttaaattcattaacgaat |
6386388 |
T |
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| Q |
115 |
atttatataatcaaacatattcgtaagattgttgaaaacgaatgacttaatcacatctaacatcacacataattgattgtgatctacc---agaattcat |
211 |
Q |
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| T |
6386387 |
atttatataatcaaacatattcgtaagattgttgaaaacgaatgacttaatcacatctaacatcacacataattgattgtgatctaccaagagaattcat |
6386288 |
T |
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| Q |
212 |
tttcggtgtatcaaagttgaactcta |
237 |
Q |
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|||||||||||||||||||||||||| |
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| T |
6386287 |
tttcggtgtatcaaagttgaactcta |
6386262 |
T |
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