View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7382_low_7 (Length: 316)
Name: NF7382_low_7
Description: NF7382
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7382_low_7 |
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Alignment Details
Target: chr1 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 16 - 292
Target Start/End: Complemental strand, 7417634 - 7417358
Alignment:
| Q |
16 |
atctcataacaaccaccacaacaaatgttaacaatccatttgagtattcttcactatatccagctcctcttaatgctttcatggctggtacgcaattctt |
115 |
Q |
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| T |
7417634 |
atctcataacaaccacaacaacaaatgttaacaatccatttgagtattcttcactatatccagctcctcttaatgctttcatggctggtacgcaattctt |
7417535 |
T |
|
| Q |
116 |
cccacctccaagatcctaaagagacgtacctatttctctctatctatatatctatttgaataattatttgagtttgagttgaaacaaaccattaagtann |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7417534 |
cccacctccaagatcctaaagagacgtacctatttctctctatctatatatctatttgaataattatttgagtttgagttgaaacaaaccattaagtatt |
7417435 |
T |
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| Q |
216 |
nnnnnnatggatcaatgttaattaatttctatgtataatcttaattaacattatattatatggatcagctctgaatt |
292 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7417434 |
ttttttatggatcaatgttaattaatttctatgtataatcttaattaacattatattatatggatcagctctgaatt |
7417358 |
T |
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