View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7384_low_2 (Length: 834)

Name: NF7384_low_2
Description: NF7384
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7384_low_2
NF7384_low_2
[»] chr3 (28 HSPs)
chr3 (18-827)||(5395479-5396296)
chr3 (512-822)||(5390739-5391049)
chr3 (19-97)||(39723212-39723290)
chr3 (18-99)||(5391897-5391978)
chr3 (25-97)||(45541591-45541663)
chr3 (175-218)||(5391827-5391870)
chr3 (18-109)||(39723371-39723462)
chr3 (37-85)||(36101600-36101648)
chr3 (37-85)||(36139910-36139958)
chr3 (35-85)||(3044247-3044297)
chr3 (26-86)||(21367698-21367759)
chr3 (45-86)||(33883748-33883789)
chr3 (26-86)||(36887535-36887595)
chr3 (25-97)||(47249464-47249536)
chr3 (32-83)||(5166357-5166408)
chr3 (39-86)||(39602202-39602249)
chr3 (28-79)||(41724250-41724301)
chr3 (521-612)||(50829736-50829826)
chr3 (521-612)||(50846027-50846117)
chr3 (36-86)||(1217789-1217839)
chr3 (43-85)||(25925774-25925816)
chr3 (36-78)||(30923887-30923929)
chr3 (37-79)||(53762384-53762426)
chr3 (26-84)||(53952081-53952139)
chr3 (36-85)||(36445857-36445906)
chr3 (44-85)||(45432936-45432977)
chr3 (30-83)||(52412887-52412940)
chr3 (41-86)||(52440656-52440701)
[»] chr8 (17 HSPs)
chr8 (522-745)||(26245477-26245700)
chr8 (30-81)||(11569440-11569491)
chr8 (42-85)||(20672782-20672825)
chr8 (37-86)||(2594987-2595036)
chr8 (37-78)||(3254264-3254305)
chr8 (37-86)||(9835890-9835939)
chr8 (28-85)||(12851208-12851265)
chr8 (41-86)||(30389130-30389175)
chr8 (37-85)||(41606893-41606941)
chr8 (37-85)||(42215296-42215344)
chr8 (26-85)||(13459677-13459736)
chr8 (43-97)||(3161619-3161673)
chr8 (27-85)||(10383917-10383975)
chr8 (26-83)||(32840964-32841022)
chr8 (26-86)||(10120787-10120848)
chr8 (26-83)||(11376737-11376794)
chr8 (37-85)||(31751546-31751595)
[»] chr6 (24 HSPs)
chr6 (19-219)||(17770586-17770803)
chr6 (24-140)||(1575728-1575844)
chr6 (19-97)||(696622-696700)
chr6 (18-109)||(696450-696541)
chr6 (25-84)||(31624123-31624182)
chr6 (26-85)||(24670452-24670511)
chr6 (18-84)||(1575928-1575994)
chr6 (36-85)||(6647419-6647468)
chr6 (36-85)||(7785733-7785782)
chr6 (96-145)||(8331708-8331757)
chr6 (26-83)||(33832252-33832309)
chr6 (25-85)||(4420675-4420735)
chr6 (25-85)||(9027610-9027670)
chr6 (41-85)||(13908495-13908539)
chr6 (37-85)||(28641739-28641787)
chr6 (37-85)||(34403887-34403935)
chr6 (44-83)||(821833-821872)
chr6 (26-97)||(10616692-10616763)
chr6 (19-97)||(23272013-23272088)
chr6 (43-85)||(6536979-6537021)
chr6 (43-97)||(17770450-17770504)
chr6 (25-82)||(8364954-8365011)
chr6 (26-86)||(9912169-9912230)
chr6 (26-83)||(33089540-33089597)
[»] chr7 (19 HSPs)
chr7 (24-140)||(15740532-15740648)
chr7 (19-97)||(43219616-43219694)
chr7 (19-97)||(11048047-11048125)
chr7 (18-123)||(11047861-11047966)
chr7 (18-109)||(43219775-43219866)
chr7 (18-84)||(15740382-15740448)
chr7 (25-86)||(9038143-9038203)
chr7 (28-81)||(25670567-25670620)
chr7 (30-86)||(18749800-18749856)
chr7 (37-85)||(25596065-25596113)
chr7 (30-78)||(36598339-36598387)
chr7 (30-78)||(42281497-42281545)
chr7 (41-84)||(6552286-6552329)
chr7 (30-85)||(12234872-12234927)
chr7 (26-97)||(19719026-19719097)
chr7 (30-85)||(20553135-20553190)
chr7 (26-81)||(36537944-36537999)
chr7 (31-85)||(39551532-39551586)
chr7 (44-85)||(7244712-7244753)
[»] chr5 (23 HSPs)
chr5 (25-81)||(7674684-7674740)
chr5 (26-85)||(10125697-10125756)
chr5 (28-80)||(22020356-22020408)
chr5 (26-84)||(499710-499768)
chr5 (41-85)||(17258877-17258921)
chr5 (38-85)||(12467165-12467212)
chr5 (30-84)||(2880530-2880584)
chr5 (36-86)||(41957440-41957490)
chr5 (37-85)||(14331399-14331447)
chr5 (45-85)||(37526197-37526237)
chr5 (45-85)||(37690634-37690674)
chr5 (37-84)||(1899187-1899234)
chr5 (36-86)||(9202736-9202787)
chr5 (26-81)||(11707091-11707146)
chr5 (26-85)||(35963273-35963332)
chr5 (30-84)||(10272414-10272468)
chr5 (26-84)||(29845414-29845471)
chr5 (25-82)||(2568693-2568750)
chr5 (37-86)||(6587097-6587146)
chr5 (36-85)||(8177521-8177570)
chr5 (25-86)||(10280577-10280637)
chr5 (31-84)||(11700362-11700415)
chr5 (43-84)||(25461312-25461353)
[»] chr1 (35 HSPs)
chr1 (37-85)||(6292525-6292573)
chr1 (26-85)||(28689431-28689490)
chr1 (37-86)||(30815643-30815692)
chr1 (26-86)||(38503443-38503504)
chr1 (41-85)||(10199402-10199446)
chr1 (26-86)||(34290267-34290327)
chr1 (25-85)||(43338148-43338208)
chr1 (26-85)||(31517719-31517778)
chr1 (43-85)||(37593680-37593722)
chr1 (36-85)||(27140510-27140559)
chr1 (28-85)||(33723363-33723420)
chr1 (27-84)||(35925723-35925780)
chr1 (41-86)||(41195187-41195232)
chr1 (42-86)||(5886989-5887033)
chr1 (37-85)||(10854765-10854813)
chr1 (37-85)||(11639406-11639454)
chr1 (37-85)||(38170680-38170728)
chr1 (39-82)||(1565527-1565570)
chr1 (43-86)||(10809376-10809419)
chr1 (26-85)||(21012822-21012881)
chr1 (36-78)||(3223706-3223748)
chr1 (44-86)||(4576836-4576878)
chr1 (35-85)||(4868432-4868482)
chr1 (44-86)||(10799493-10799535)
chr1 (28-86)||(31118074-31118132)
chr1 (43-85)||(46252678-46252720)
chr1 (43-84)||(1509961-1510002)
chr1 (25-86)||(7136976-7137037)
chr1 (37-86)||(10744332-10744381)
chr1 (36-85)||(11695893-11695942)
chr1 (41-86)||(12564493-12564538)
chr1 (44-85)||(25479613-25479654)
chr1 (36-85)||(26184780-26184829)
chr1 (44-81)||(29635383-29635420)
chr1 (44-85)||(47877141-47877182)
[»] chr4 (15 HSPs)
chr4 (26-84)||(6978941-6978999)
chr4 (30-79)||(1132967-1133016)
chr4 (30-84)||(21592989-21593043)
chr4 (25-97)||(13126553-13126626)
chr4 (26-79)||(25571298-25571351)
chr4 (33-78)||(29263409-29263454)
chr4 (36-85)||(52746829-52746878)
chr4 (26-86)||(23459659-23459719)
chr4 (26-85)||(1137744-1137803)
chr4 (40-83)||(24747353-24747396)
chr4 (37-84)||(44249318-44249365)
chr4 (31-85)||(24929525-24929579)
chr4 (30-84)||(29467607-29467661)
chr4 (28-85)||(4691880-4691937)
chr4 (32-85)||(22236090-22236143)
[»] chr2 (23 HSPs)
chr2 (25-86)||(7035544-7035606)
chr2 (25-85)||(1647268-1647328)
chr2 (26-85)||(38809358-38809417)
chr2 (26-84)||(27237872-27237930)
chr2 (27-85)||(40158750-40158808)
chr2 (37-86)||(680534-680583)
chr2 (37-86)||(29316765-29316814)
chr2 (25-86)||(44606088-44606149)
chr2 (37-85)||(35379006-35379054)
chr2 (26-97)||(787352-787423)
chr2 (30-85)||(8820275-8820330)
chr2 (26-85)||(28677638-28677697)
chr2 (26-85)||(35378511-35378570)
chr2 (25-79)||(5902527-5902581)
chr2 (37-83)||(33256774-33256820)
chr2 (26-84)||(45314901-45314959)
chr2 (36-81)||(10567093-10567138)
chr2 (36-85)||(14666580-14666629)
chr2 (41-86)||(33319807-33319851)
chr2 (26-86)||(40682373-40682434)
chr2 (36-85)||(41809234-41809283)
chr2 (28-85)||(43717117-43717174)
chr2 (37-78)||(44438829-44438870)


Alignment Details
Target: chr3 (Bit Score: 709; Significance: 0; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 709; E-Value: 0
Query Start/End: Original strand, 18 - 827
Target Start/End: Complemental strand, 5396296 - 5395479
Alignment:
Q  18 gtttgccaagaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataagtcatcgaagatactgatttaacttgattttcc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5396296 gtttgccaagaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataagtcatcgaagatactgatttaacttgattttcc 5396197  T
Q  118 catttaccctttgagaaggataccaaagtcccctgccataccctgaataattatggtcataaaatatagtttgaatgttaacaatgtgatgtgaacaata 217  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  5396196 catttaccctttgagaaggataccaaagtccccggccaaaccctgaataattatggtgataaaatatagtttgaatgttaacaatgtgatgtgaacaata 5396097  T
Q  218 ag---------------tgaagaggttaagctcaatttttaattatgagttcttacttttccacaattttcaattttcatataatttacagttacttggt 302  Q
    ||               |||||| ||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||    
T  5396096 aggaaaagttagagaagtgaagaagttaagctcaatttttaattatgagttcttacttttccacaattttca-------tataatttacagttacttggt 5396004  T
Q  303 tcacactttgagtgagaaatactattaatttaatagcttagtactagttttgatcaacggctgtgactccttcgcatattttcactaattttcattcgct 402  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5396003 tcacactttgagtgggaaatactattaatttaatagcttagtactagttttgatcaacggctgtgactccttcgcatattttcactaattttcattcgct 5395904  T
Q  403 atatttagcattttccttaaatgttatatatctattttgccaagtgagcttgttattgatttgttcgtttcagttccagttcgtgactcttttgtgactt 502  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5395903 atatttagcattttccttaaatgttatatatctattttgccaagtgagcttgttattgatttgttcgtttcagttccagttcgtgactcttttgtgactt 5395804  T
Q  503 gttaattatagaggcaatatgcaggcgagtgataggtttaacataaattcccaactcgagcatctgcaagctaaatatgttggaactggtcatgctgata 602  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5395803 gttaattatagaggcaatatgcaggcgagtgataggtttaacataaattcccaactcgagcatctgcaagctaaatatgttggaactggtcatgctgata 5395704  T
Q  603 tcaatagatttgaatgggctgtgaatattcaacgtgatagctatgcttcgtatattggccattaccctttactttcttacttttctattgctcaaaacga 702  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  5395703 tcaacagatttgaatgggctgtgaatattcaacgtgatagctatgcttcgtatattggccattaccctttactttcttacttttctattgctcaaaatga 5395604  T
Q  703 atctattggtagacagcgttacacttttatgcaggtaatttttattcactacttttcaatttgattcatgttcaatgcctagatcgttactattttcttt 802  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  5395603 atctattggtagacagcgttacacttttatgcaggtaatttttattcactacttttcaatttgattcatgtttaatgcctagatcgttactattttcttt 5395504  T
Q  803 catcgaacatagacaatattcttcg 827  Q
    |||| ||||||||||||||| ||||    
T  5395503 catcaaacatagacaatatttttcg 5395479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 512 - 822
Target Start/End: Complemental strand, 5391049 - 5390739
Alignment:
Q  512 agaggcaatatgcaggcgagtgataggtttaacataaattcccaactcgagcatctgcaagctaaatatgttggaactggtcatgctgatatcaatagat 611  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5391049 agagacaatatgcaggcgagtgataggtttaacataaattcccaactcgagcatctgcaagctaaatatgttggaactggtcatgctgatatcaatagat 5390950  T
Q  612 ttgaatgggctgtgaatattcaacgtgatagctatgcttcgtatattggccattaccctttactttcttacttttctattgctcaaaacgaatctattgg 711  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5390949 ttgaatgggctgtgaatattcaacgtgatagctatgcttcgtatattggccattaccctttactttcttacttttctattgctcaaaacgaatctattgg 5390850  T
Q  712 tagacagcgttacacttttatgcaggtaatttttattcactacttttcaatttgattcatgttcaatgcctagatcgttactattttctttcatcgaaca 811  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5390849 tagacagcgttacacttttatgcaggtaatttttattcactacttttcaatttgattcatgttcaatgcctagatcgttactattttctttcatcaaaca 5390750  T
Q  812 tagacaatatt 822  Q
     ||||||||||    
T  5390749 cagacaatatt 5390739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 39723212 - 39723290
Alignment:
Q  19 tttgccaagaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataagtcatcgaagata 97  Q
    |||| |||||||||||  ||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||    
T  39723212 tttggcaagaacttatcaaaacagcttatgacatgttcataagctgttttcagcttattctcataagtcatcgaagata 39723290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 5391978 - 5391897
Alignment:
Q  18 gtttgccaagaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataagtcatcgaagatact 99  Q
    ||||| ||| |||||||  ||||||||||||||||||| ||||| |||||||| |||||||||||||||  |||||||||||    
T  5391978 gtttggcaataacttatgaaaacagcttatgacatgttcataagctgttttcaacttattttcataagtattcgaagatact 5391897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 45541663 - 45541591
Alignment:
Q  25 aagaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataagtcatcgaagata 97  Q
    ||||||||||  ||||||||||||||||||| ||||| ||||||||| ||||| |||||||| ||| ||||||    
T  45541663 aagaacttatgaaaacagcttatgacatgttcataagctgttttcaggttattctcataagttatccaagata 45541591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 218
Target Start/End: Complemental strand, 5391870 - 5391827
Alignment:
Q  175 cataaaatatagtttgaatgttaacaatgtgatgtgaacaataa 218  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  5391870 cataacatatagtttgaatgttaacaatgtgatgtgaacaataa 5391827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 39723371 - 39723462
Alignment:
Q  18 gtttgccaagaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataagtcatcgaagatactgatttaactt 109  Q
    ||||| ||| |||||||  ||||||||||||||||||| ||||| |||||| |||||||  || ||||||||| |||||  |||||||||||    
T  39723371 gtttggcaaaaacttatgaaaacagcttatgacatgttcataagctgtttttagcttatcctcttaagtcatcaaagatcttgatttaactt 39723462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 85
Target Start/End: Complemental strand, 36101648 - 36101600
Alignment:
Q  37 aaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    ||||||||||||||||||| | ||| |||||||||||||||||||||||    
T  36101648 aaacagcttatgacatgttcacaagctgttttcagcttattttcataag 36101600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 85
Target Start/End: Complemental strand, 36139958 - 36139910
Alignment:
Q  37 aaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    ||||||||||||||||||| | ||| |||||||||||||||||||||||    
T  36139958 aaacagcttatgacatgttcacaagctgttttcagcttattttcataag 36139910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 85
Target Start/End: Original strand, 3044247 - 3044297
Alignment:
Q  35 tgaaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    ||||||| ||||||||||||| ||||| |||||||| ||||||||||||||    
T  3044247 tgaaacaacttatgacatgttcataagctgttttcaacttattttcataag 3044297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 21367759 - 21367698
Alignment:
Q  26 agaacttattgaaacagcttatgacat-gttaataaggtgttttcagcttattttcataagt 86  Q
    |||||||||  |||||||||||||||| ||| | ||| ||||||||||||||||||||||||    
T  21367759 agaacttatgaaaacagcttatgacattgttcacaagctgttttcagcttattttcataagt 21367698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 33883748 - 33883789
Alignment:
Q  45 tatgacatgttaataaggtgttttcagcttattttcataagt 86  Q
    ||||||||||| ||||| ||||||||||||||||||||||||    
T  33883748 tatgacatgttcataagttgttttcagcttattttcataagt 33883789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 36887595 - 36887535
Alignment:
Q  26 agaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataagt 86  Q
    |||||||||  ||| | ||| ||||||||| ||||| ||||||||||||||||||||||||    
T  36887595 agaacttatcaaaagaacttttgacatgttcataagatgttttcagcttattttcataagt 36887535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 47249464 - 47249536
Alignment:
Q  25 aagaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataagtcatcgaagata 97  Q
    ||||||||||  ||||  ||||||||||||| ||||| ||||||  ||||||||||||||||| || ||||||    
T  47249464 aagaacttatgaaaaccacttatgacatgttcataagttgtttttggcttattttcataagtcctccaagata 47249536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 5166408 - 5166357
Alignment:
Q  32 tattgaaacagcttatgacatgttaataaggtgttttcagcttattttcata 83  Q
    |||| ||||||| ||||||||||| ||||| |||||||| ||||||||||||    
T  5166408 tattaaaacagcatatgacatgttcataagctgttttcatcttattttcata 5166357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 86
Target Start/End: Original strand, 39602202 - 39602249
Alignment:
Q  39 acagcttatgacatgttaataaggtgttttcagcttattttcataagt 86  Q
    ||||||||||||||||| ||||  |||||||| |||||||||||||||    
T  39602202 acagcttatgacatgttcataaattgttttcaacttattttcataagt 39602249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 41724301 - 41724250
Alignment:
Q  28 aacttattgaaacagcttatgacatgttaataaggtgttttcagcttatttt 79  Q
    ||||||| |||||| ||||||||||||  ||||| |||||||||||||||||    
T  41724301 aacttatggaaacaacttatgacatgtccataagttgttttcagcttatttt 41724250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 521 - 612
Target Start/End: Complemental strand, 50829826 - 50829736
Alignment:
Q  521 atgcaggcgagtgataggtttaacataaattcccaactcgagcatctgcaagctaaatatgttggaactggtcatgctgatatcaatagatt 612  Q
    ||||||||| ||||||| ||| |||| |||||  ||||||||||||| |||||||||||| ||| |||| | ||| ||||||| || |||||    
T  50829826 atgcaggcg-gtgatagtttttacatcaattcttaactcgagcatctccaagctaaatatattgaaacttgccattctgatatgaacagatt 50829736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 521 - 612
Target Start/End: Original strand, 50846027 - 50846117
Alignment:
Q  521 atgcaggcgagtgataggtttaacataaattcccaactcgagcatctgcaagctaaatatgttggaactggtcatgctgatatcaatagatt 612  Q
    ||||||||| ||||||| ||| |||| |||||  ||||||||||||| |||||||||||| ||| |||| | ||| ||||||| || |||||    
T  50846027 atgcaggcg-gtgatagtttttacatcaattcttaactcgagcatctccaagctaaatatattgaaacttgccattctgatatgaacagatt 50846117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 86
Target Start/End: Original strand, 1217789 - 1217839
Alignment:
Q  36 gaaacagcttatgacatgttaataaggtgttttcagcttattttcataagt 86  Q
    |||||||||||||||||||  ||||| |||||||| |||| ||||||||||    
T  1217789 gaaacagcttatgacatgtccataagttgttttcatcttactttcataagt 1217839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 25925816 - 25925774
Alignment:
Q  43 cttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    ||||||||||||| ||||| |||||||| ||||||||||||||    
T  25925816 cttatgacatgttcataagctgttttcaacttattttcataag 25925774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 78
Target Start/End: Original strand, 30923887 - 30923929
Alignment:
Q  36 gaaacagcttatgacatgttaataaggtgttttcagcttattt 78  Q
    |||||||||||||||||||  ||||| ||||||||||||||||    
T  30923887 gaaacagcttatgacatgtctataagctgttttcagcttattt 30923929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 79
Target Start/End: Original strand, 53762384 - 53762426
Alignment:
Q  37 aaacagcttatgacatgttaataaggtgttttcagcttatttt 79  Q
    ||||||||||||||||||| ||||| |||||||| ||||||||    
T  53762384 aaacagcttatgacatgttcataagctgttttcaacttatttt 53762426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 53952139 - 53952081
Alignment:
Q  26 agaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataa 84  Q
    |||||||||  |||||||| || ||||||| || || ||||||||||||||||||||||    
T  53952139 agaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 53952081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 85
Target Start/End: Complemental strand, 36445906 - 36445857
Alignment:
Q  36 gaaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    ||||| |||||||||||||| || || |||||||| ||||||||||||||    
T  36445906 gaaactgcttatgacatgttcattagttgttttcatcttattttcataag 36445857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 45432936 - 45432977
Alignment:
Q  44 ttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    |||||||||||| ||||| |||||||||||||||| ||||||    
T  45432936 ttatgacatgttcataagttgttttcagcttatttccataag 45432977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 52412887 - 52412940
Alignment:
Q  30 cttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcata 83  Q
    ||||| |||||| | ||||||||||| ||||| |||||||||||||||| ||||    
T  52412887 cttatagaaacaacctatgacatgtttataagctgttttcagcttatttccata 52412940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 52440656 - 52440701
Alignment:
Q  41 agcttatgacatgttaataaggtgttttcagcttattttcataagt 86  Q
    ||||||||||||||| ||||| |||||||| || ||||||||||||    
T  52440656 agcttatgacatgttcataagttgttttcaactaattttcataagt 52440701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 180; Significance: 9e-97; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 180; E-Value: 9e-97
Query Start/End: Original strand, 522 - 745
Target Start/End: Original strand, 26245477 - 26245700
Alignment:
Q  522 tgcaggcgagtgataggtttaacataaattcccaactcgagcatctgcaagctaaatatgttggaactggtcatgctgatatcaatagatttgaatgggc 621  Q
    ||||||||||||||||||||||||||||||| ||||| || ||||| ||||||||||| ||||||||||| |||||||||||||| ||||||||||||||    
T  26245477 tgcaggcgagtgataggtttaacataaattcgcaacttgaacatcttcaagctaaatacgttggaactggacatgctgatatcaacagatttgaatgggc 26245576  T
Q  622 tgtgaatattcaacgtgatagctatgcttcgtatattggccattaccctttactttcttacttttctattgctcaaaacgaatctattggtagacagcgt 721  Q
    |||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26245577 tgtgaatattcaacgtgatagctatgcttcatacattggccattatcctttactttcttacttttctatcgctcaaaacgaatctattggtagacagcgt 26245676  T
Q  722 tacacttttatgcaggtaattttt 745  Q
    ||||||||||||||||||||||||    
T  26245677 tacacttttatgcaggtaattttt 26245700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 30 - 81
Target Start/End: Original strand, 11569440 - 11569491
Alignment:
Q  30 cttattgaaacagcttatgacatgttaataaggtgttttcagcttattttca 81  Q
    ||||| |||||||||||||||||||  ||||| |||||||||||||||||||    
T  11569440 cttatggaaacagcttatgacatgtacataagttgttttcagcttattttca 11569491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 85
Target Start/End: Complemental strand, 20672825 - 20672782
Alignment:
Q  42 gcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    |||||||||||||| ||||| |||||||||||||||||||||||    
T  20672825 gcttatgacatgttcataagctgttttcagcttattttcataag 20672782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 2594987 - 2595036
Alignment:
Q  37 aaacagcttatgacatgttaataaggtgttttcagcttattttcataagt 86  Q
    ||||| ||||||||||||| ||||| ||||||||||||||| ||||||||    
T  2594987 aaacaacttatgacatgttcataagttgttttcagcttattctcataagt 2595036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 78
Target Start/End: Complemental strand, 3254305 - 3254264
Alignment:
Q  37 aaacagcttatgacatgttaataaggtgttttcagcttattt 78  Q
    ||||||||||||||||||| ||||| ||||||||||||||||    
T  3254305 aaacagcttatgacatgttcataagctgttttcagcttattt 3254264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 9835890 - 9835939
Alignment:
Q  37 aaacagcttatgacatgttaataaggtgttttcagcttattttcataagt 86  Q
    ||||||||||||||||||| ||||| |||||||| ||||||| |||||||    
T  9835890 aaacagcttatgacatgttcataagctgttttcatcttatttccataagt 9835939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 12851265 - 12851208
Alignment:
Q  28 aacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    |||||||  ||||||||||| ||||||| ||||| ||||||| |||||||||||||||    
T  12851265 aacttatgaaaacagcttataacatgttcataagatgttttcggcttattttcataag 12851208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 30389175 - 30389130
Alignment:
Q  41 agcttatgacatgttaataaggtgttttcagcttattttcataagt 86  Q
    |||| |||||||||| ||||| ||||||||||||||||||||||||    
T  30389175 agctaatgacatgttcataagttgttttcagcttattttcataagt 30389130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 85
Target Start/End: Original strand, 41606893 - 41606941
Alignment:
Q  37 aaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    ||||||||||||||||||| | ||| |||||||||||||||| ||||||    
T  41606893 aaacagcttatgacatgttcaaaagttgttttcagcttatttccataag 41606941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 85
Target Start/End: Original strand, 42215296 - 42215344
Alignment:
Q  37 aaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    |||||||||||||| |||| ||||| |||||||||||||||| ||||||    
T  42215296 aaacagcttatgacttgttcataagctgttttcagcttatttacataag 42215344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 13459736 - 13459677
Alignment:
Q  26 agaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    |||||||||  |||||||||||||||| || ||||  |||||||||| ||||||||||||    
T  13459736 agaacttatgaaaacagcttatgacattttcataaactgttttcagcctattttcataag 13459677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 3161619 - 3161673
Alignment:
Q  43 cttatgacatgttaataaggtgttttcagcttattttcataagtcatcgaagata 97  Q
    ||||||||||||| ||||  ||||||||||||||||| ||||| ||| |||||||    
T  3161619 cttatgacatgttcataaaatgttttcagcttatttttataagccattgaagata 3161673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 10383975 - 10383917
Alignment:
Q  27 gaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    ||||||||  |||||||||||||||| || ||||| ||||| |||||||||| ||||||    
T  10383975 gaacttatgaaaacagcttatgacattttcataagctgtttacagcttatttccataag 10383917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 32840964 - 32841022
Alignment:
Q  26 agaacttattgaaacagcttatgacat-gttaataaggtgttttcagcttattttcata 83  Q
    |||||||||  ||||| |||||||||| ||| ||||| |||||||||||||||||||||    
T  32840964 agaacttatgaaaacaacttatgacattgttcataagttgttttcagcttattttcata 32841022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 10120848 - 10120787
Alignment:
Q  26 agaacttattgaaacagcttatgacatgt-taataaggtgttttcagcttattttcataagt 86  Q
    |||||||||  |||||||||||||||| | | ||| | ||||||||||||||||||||||||    
T  10120848 agaacttatgaaaacagcttatgacatttatcatatgctgttttcagcttattttcataagt 10120787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 11376794 - 11376737
Alignment:
Q  26 agaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcata 83  Q
    |||||||||  ||| ||||| |||||||||||||   |||||||||||||||||||||    
T  11376794 agaacttatgaaaatagcttgtgacatgttaatatcttgttttcagcttattttcata 11376737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 85
Target Start/End: Original strand, 31751546 - 31751595
Alignment:
Q  37 aaacagcttatgacat-gttaataaggtgttttcagcttattttcataag 85  Q
    |||||||||||||||| ||| ||||| | |||||||||||||||||||||    
T  31751546 aaacagcttatgacattgttcataagctattttcagcttattttcataag 31751595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 4e-37; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 17770586 - 17770803
Alignment:
Q  19 tttgccaagaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataagtcatcgaagatactgatttaacttgattttccc 118  Q
    |||| ||||||||| |  ||||||||||||||||||| |||||||| ||||| |||||||| |||| |||||||||||||||| ||||||| ||||||||    
T  17770586 tttgacaagaacttgtgaaaacagcttatgacatgttcataaggtgctttcaacttatttttataa-tcatcgaagatactgacttaacttaattttccc 17770684  T
Q  119 atttaccctttgagaaggat------------------accaaagtcccctgccataccctgaataattatggtcataaaatatagtttgaatgttaaca 200  Q
    || |||||||||||||||||                  ||||||||||  || || ||||||||||||| |||| |||| ||||||||||||||||||||    
T  17770685 atataccctttgagaaggataccaaagctaccaaagccaccaaagtccattgtcaaaccctgaataattttggtgataatatatagtttgaatgttaaca 17770784  T
Q  201 atgtgatgtgaacaataag 219  Q
    |||||||||||||||||||    
T  17770785 atgtgatgtgaacaataag 17770803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 24 - 140
Target Start/End: Complemental strand, 1575844 - 1575728
Alignment:
Q  24 caagaacttattgaaacagcttatga-catgttaataaggtgttttcagcttattttcataagtcatcgaagatactgatttaacttgattttcccattt 122  Q
    |||||||||||  ||||||||||||| |||||  |||||||||||||| ||||||||||||| |||| ||||||||||  ||||||||||||||||||||    
T  1575844 caagaacttatgaaaacagcttatgaacatgtccataaggtgttttcaacttattttcataa-tcattgaagatactggcttaacttgattttcccattt 1575746  T
Q  123 accctttgagaaggatac 140  Q
     | |||||||||||||||    
T  1575745 gctctttgagaaggatac 1575728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 696700 - 696622
Alignment:
Q  19 tttgccaagaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataagtcatcgaagata 97  Q
    |||| |||||||||||  ||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||    
T  696700 tttggcaagaacttatcaaaacagcttatgacatgttcataagctgttttcagcttattctcataagtcatcgaagata 696622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 109
Target Start/End: Complemental strand, 696541 - 696450
Alignment:
Q  18 gtttgccaagaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataagtcatcgaagatactgatttaactt 109  Q
    ||||| ||| |||||||  ||||||||||||||||||| ||||| |||||| |||||||  || |||||||||||||||  |||||||||||    
T  696541 gtttggcaaaaacttatgaaaacagcttatgacatgttcataagctgtttttagcttatcctcttaagtcatcgaagatcttgatttaactt 696450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 31624182 - 31624123
Alignment:
Q  25 aagaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataa 84  Q
    ||||||||||  ||||||||||||||||||| ||||| |||||||| |||||||||||||    
T  31624182 aagaacttatgaaaacagcttatgacatgttcataagctgttttcaacttattttcataa 31624123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 24670511 - 24670452
Alignment:
Q  26 agaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    ||||||||| |||||| |||||||||||| |||| | |||| ||||||||||||||||||    
T  24670511 agaacttatagaaacaacttatgacatgtcaatatgctgttatcagcttattttcataag 24670452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 1575994 - 1575928
Alignment:
Q  18 gtttgccaagaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataa 84  Q
    ||||| |||||||||||  ||||| ||||||||||||| ||||| |||||| | |||||||||||||    
T  1575994 gtttggcaagaacttatgaaaacaacttatgacatgttcataagctgtttttaacttattttcataa 1575928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 85
Target Start/End: Complemental strand, 6647468 - 6647419
Alignment:
Q  36 gaaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    |||| ||||||||||||||| ||||| |||||||| ||||||||||||||    
T  6647468 gaaatagcttatgacatgttcataagatgttttcaacttattttcataag 6647419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 85
Target Start/End: Original strand, 7785733 - 7785782
Alignment:
Q  36 gaaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    |||||||||||||||||||  ||||| |||||||||||||||| ||||||    
T  7785733 gaaacagcttatgacatgtctataagttgttttcagcttatttccataag 7785782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 8331757 - 8331708
Alignment:
Q  96 tactgatttaacttgattttcccatttaccctttgagaaggataccaaag 145  Q
    ||||||||||||||||||| ||||||| |||| ||| |||||||||||||    
T  8331757 tactgatttaacttgatttacccatttgccctctgacaaggataccaaag 8331708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 33832252 - 33832309
Alignment:
Q  26 agaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcata 83  Q
    |||||||||  ||||| ||||||||||||| ||||| |||||| ||||||||||||||    
T  33832252 agaacttatgaaaacaacttatgacatgtttataagttgtttttagcttattttcata 33832309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 4420735 - 4420675
Alignment:
Q  25 aagaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    |||| ||||| ||||||  |||||||||||| ||||| |||||||||||||||| ||||||    
T  4420735 aagagcttatagaaacaaattatgacatgttcataagctgttttcagcttatttccataag 4420675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 9027670 - 9027610
Alignment:
Q  25 aagaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    |||| ||||| |||| | ||||||||||||  ||||| |||||||||||||||||||||||    
T  9027670 aagagcttatggaaataacttatgacatgtccataagttgttttcagcttattttcataag 9027610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 13908539 - 13908495
Alignment:
Q  41 agcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    |||||||||||||||  |||| |||||||||||||||||||||||    
T  13908539 agcttatgacatgttcgtaagctgttttcagcttattttcataag 13908495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 85
Target Start/End: Original strand, 28641739 - 28641787
Alignment:
Q  37 aaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    ||||||||||| ||||||| ||||| |||||| ||||||||||||||||    
T  28641739 aaacagcttataacatgttcataagctgtttttagcttattttcataag 28641787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 85
Target Start/End: Complemental strand, 34403935 - 34403887
Alignment:
Q  37 aaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    ||||| ||||||||||||| |||||||||||||| ||||||| ||||||    
T  34403935 aaacaacttatgacatgttcataaggtgttttcaccttatttccataag 34403887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 83
Target Start/End: Complemental strand, 821872 - 821833
Alignment:
Q  44 ttatgacatgttaataaggtgttttcagcttattttcata 83  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  821872 ttatgacatgttcataagctgttttcagcttattttcata 821833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 10616692 - 10616763
Alignment:
Q  26 agaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataagtcatcgaagata 97  Q
    |||||||||  ||||| ||||||||||||| ||||| ||||||||| ||||||| |||| || || ||||||    
T  10616692 agaacttatcaaaacaccttatgacatgttcataagctgttttcagtttatttttataaatcctctaagata 10616763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 23272013 - 23272088
Alignment:
Q  19 tttgccaagaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataagtcatcgaagata 97  Q
    |||| |||||||||||  ||||||||||||||  | | ||||| ||||||||||||||| ||||||| |||||||||||    
T  23272013 tttggcaagaacttatcaaaacagcttatgac--gatcataagctgttttcagcttattctcataag-catcgaagata 23272088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 6537021 - 6536979
Alignment:
Q  43 cttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    ||||||||||||| ||||| |||||||||||||||| ||||||    
T  6537021 cttatgacatgttcataagttgttttcagcttatttccataag 6536979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 17770450 - 17770504
Alignment:
Q  43 cttatgacatgttaataaggtgttttcagcttattttcataagtcatcgaagata 97  Q
    ||||||||||||| ||||  | |||||| ||||||||||||||||||| ||||||    
T  17770450 cttatgacatgttcataaactattttcaacttattttcataagtcatcaaagata 17770504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 8364954 - 8365011
Alignment:
Q  25 aagaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcat 82  Q
    |||||||||| |||| | || |||||||||| | ||| ||||||||||||||||||||    
T  8364954 aagaacttatggaaataactgatgacatgtttacaagctgttttcagcttattttcat 8365011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 9912169 - 9912230
Alignment:
Q  26 agaacttattgaaacagcttatgacat-gttaataaggtgttttcagcttattttcataagt 86  Q
    |||||||||  || ||||||||||||| ||| ||||| |||||| |||||||||||||||||    
T  9912169 agaacttatgaaaccagcttatgacattgttcataagctgttttgagcttattttcataagt 9912230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 33089597 - 33089540
Alignment:
Q  26 agaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcata 83  Q
    |||||||||  |||||||||| |||||||| ||||| ||||||  |||||||||||||    
T  33089597 agaacttatgaaaacagcttaggacatgtttataagttgttttacgcttattttcata 33089540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 2e-26; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 24 - 140
Target Start/End: Original strand, 15740532 - 15740648
Alignment:
Q  24 caagaacttattgaaacagcttatga-catgttaataaggtgttttcagcttattttcataagtcatcgaagatactgatttaacttgattttcccattt 122  Q
    |||||||||||  ||||||||||||| |||||  |||||||||||||| ||||||||||||| |||| ||||||||||  ||||||||||||||||||||    
T  15740532 caagaacttatgaaaacagcttatgaacatgtccataaggtgttttcaacttattttcataa-tcattgaagatactggcttaacttgattttcccattt 15740630  T
Q  123 accctttgagaaggatac 140  Q
     | |||||||||||||||    
T  15740631 gctctttgagaaggatac 15740648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 43219616 - 43219694
Alignment:
Q  19 tttgccaagaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataagtcatcgaagata 97  Q
    |||| |||||||||||  ||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||    
T  43219616 tttggcaagaacttatcaaaacagcttatgacatgttcataagctgttttcagcttattctcataagtcatcgaagata 43219694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 11048125 - 11048047
Alignment:
Q  19 tttgccaagaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataagtcatcgaagata 97  Q
    |||| |||||||||||  ||||| ||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||    
T  11048125 tttggcaagaacttatcaaaacaacttatgacatgttcataagctgttttcagcttattctcataagtcatcgaagata 11048047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 18 - 123
Target Start/End: Complemental strand, 11047966 - 11047861
Alignment:
Q  18 gtttgccaagaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataagtcatcgaagatactgatttaacttgattttcc 117  Q
    ||||| ||| |||||||  ||||| ||||||||||||| ||||| |||||| |||||||  |||||||||||| |||||  |||||||||||| ||||||    
T  11047966 gtttggcaaaaacttataaaaacaacttatgacatgttcataagctgtttttagcttatcctcataagtcatcaaagatcttgatttaacttggttttcc 11047867  T
Q  118 cattta 123  Q
    ||||||    
T  11047866 cattta 11047861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 43219775 - 43219866
Alignment:
Q  18 gtttgccaagaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataagtcatcgaagatactgatttaactt 109  Q
    ||||| ||| |||||||  ||||||||||||||||||| ||||| |||||| |||||||  || |||||||||||||||  |||||||||||    
T  43219775 gtttggcaaaaacttatgaaaacagcttatgacatgttcataagctgtttttagcttatcctcttaagtcatcgaagatcttgatttaactt 43219866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 15740382 - 15740448
Alignment:
Q  18 gtttgccaagaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataa 84  Q
    ||||| |||||||||||  ||||| ||||||||||||| ||||| |||||| | |||||||||||||    
T  15740382 gtttggcaagaacttatgaaaacaacttatgacatgttcataagctgtttttaacttattttcataa 15740448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 86
Target Start/End: Complemental strand, 9038203 - 9038143
Alignment:
Q  25 aagaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataagt 86  Q
    ||||||||||  ||||||||||||||||||| ||||  ||||||||||||||||||| ||||    
T  9038203 aagaacttataaaaacagcttatgacatgttcataa-ttgttttcagcttattttcacaagt 9038143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 25670567 - 25670620
Alignment:
Q  28 aacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttca 81  Q
    |||||||  ||||| ||||||||||||||||||  |||||||||||||||||||    
T  25670567 aacttatgaaaacaacttatgacatgttaataaattgttttcagcttattttca 25670620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 18749800 - 18749856
Alignment:
Q  30 cttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataagt 86  Q
    ||||| ||||||||||| |||||||| |||||  ||||||||||||||| |||||||    
T  18749800 cttatagaaacagcttacgacatgttcataagcagttttcagcttatttccataagt 18749856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 85
Target Start/End: Complemental strand, 25596113 - 25596065
Alignment:
Q  37 aaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    ||||||||||||||| |||| |||| |||||||| ||||||||||||||    
T  25596113 aaacagcttatgacaagttactaagttgttttcaacttattttcataag 25596065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 36598339 - 36598387
Alignment:
Q  30 cttattgaaacagcttatgacatgttaataaggtgttttcagcttattt 78  Q
    ||||| |||||| ||||||||||||| ||||| ||||||||||||||||    
T  36598339 cttatggaaacatcttatgacatgttcataagctgttttcagcttattt 36598387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 42281497 - 42281545
Alignment:
Q  30 cttattgaaacagcttatgacatgttaataaggtgttttcagcttattt 78  Q
    ||||| ||||||||||||||||||| |||||  ||||||||||||||||    
T  42281497 cttatagaaacagcttatgacatgtaaataatttgttttcagcttattt 42281545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 84
Target Start/End: Original strand, 6552286 - 6552329
Alignment:
Q  41 agcttatgacatgttaataaggtgttttcagcttattttcataa 84  Q
    |||||||||||| || ||||| ||||||||||||||||||||||    
T  6552286 agcttatgacatattcataagctgttttcagcttattttcataa 6552329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 12234872 - 12234927
Alignment:
Q  30 cttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    ||||| |||||| ||||||||||||  ||||| |||||||||||||||| ||||||    
T  12234872 cttatagaaacaacttatgacatgtctataagctgttttcagcttatttccataag 12234927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 97
Target Start/End: Complemental strand, 19719097 - 19719026
Alignment:
Q  26 agaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataagtcatcgaagata 97  Q
    |||||||||  ||||| ||||||||||||| ||||  |||||||||||||| || |||||| ||| ||||||    
T  19719097 agaacttatgaaaacaacttatgacatgttcataaactgttttcagcttatctttataagtgatccaagata 19719026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 20553190 - 20553135
Alignment:
Q  30 cttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    ||||| ||||||||||| |||||||| ||||| ||||||||| |||||| ||||||    
T  20553190 cttatggaaacagcttacgacatgttcataagttgttttcagattatttccataag 20553135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 36537999 - 36537944
Alignment:
Q  26 agaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttca 81  Q
    ||||||||| |||||| ||||||||||||| ||||| |||||| ||||| ||||||    
T  36537999 agaacttatggaaacaacttatgacatgttcataagttgtttttagctttttttca 36537944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 85
Target Start/End: Original strand, 39551532 - 39551586
Alignment:
Q  31 ttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    |||| |||||| ||||||||||||  |||||||||| ||||||||||| ||||||    
T  39551532 ttatggaaacaacttatgacatgtccataaggtgttgtcagcttatttccataag 39551586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 7244753 - 7244712
Alignment:
Q  44 ttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    |||||||||| | ||||| |||||||||||||||||||||||    
T  7244753 ttatgacatgctcataagttgttttcagcttattttcataag 7244712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 3e-16; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 7674740 - 7674684
Alignment:
Q  25 aagaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttca 81  Q
    |||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||    
T  7674740 aagaacttatggaaacaacttatgacatgtttataaggtgttttcagcttattttca 7674684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 10125697 - 10125756
Alignment:
Q  26 agaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    |||||||||  ||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  10125697 agaacttatgtaaacaacttatgacatgttgataaggtgttttcagcttattttcataag 10125756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 22020408 - 22020356
Alignment:
Q  28 aacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttc 80  Q
    ||||||||||||||||||||||||||| |||||| |||||||| |||||||||    
T  22020408 aacttattgaaacagcttatgacatgtcaataagttgttttcaacttattttc 22020356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 499710 - 499768
Alignment:
Q  26 agaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataa 84  Q
    |||||||||  ||||||||||||||||||||| ||| |||||||||||||||| |||||    
T  499710 agaacttatgaaaacagcttatgacatgttaacaagttgttttcagcttatttccataa 499768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 85
Target Start/End: Original strand, 17258877 - 17258921
Alignment:
Q  41 agcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||    
T  17258877 agcttatgacatgttcataagctgttttcagcttattttcataag 17258921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 38 - 85
Target Start/End: Complemental strand, 12467212 - 12467165
Alignment:
Q  38 aacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    |||| ||||||||||||| ||||| |||||||||||||||||||||||    
T  12467212 aacaacttatgacatgtttataagctgttttcagcttattttcataag 12467165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 84
Target Start/End: Original strand, 2880530 - 2880584
Alignment:
Q  30 cttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataa 84  Q
    ||||| ||||||||| |||| ||||| |||||||||||||||||||||| |||||    
T  2880530 cttatggaaacagctaatgatatgttcataaggtgttttcagcttatttccataa 2880584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 86
Target Start/End: Original strand, 41957440 - 41957490
Alignment:
Q  36 gaaacagcttatgacatgttaataaggtgttttcagcttattttcataagt 86  Q
    |||||||||||||||||||  ||||| |||||||| |||||||||||||||    
T  41957440 gaaacagcttatgacatgtccataagttgttttcatcttattttcataagt 41957490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 85
Target Start/End: Complemental strand, 14331447 - 14331399
Alignment:
Q  37 aaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    ||||||||||||||||||  ||||| || ||||||||||||||||||||    
T  14331447 aaacagcttatgacatgtccataagctgatttcagcttattttcataag 14331399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 37526197 - 37526237
Alignment:
Q  45 tatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    ||||||||||||||||| |||||||||||||||| ||||||    
T  37526197 tatgacatgttaataagctgttttcagcttatttccataag 37526237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 37690634 - 37690674
Alignment:
Q  45 tatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    ||||||||||||||||| |||||||||||||||| ||||||    
T  37690634 tatgacatgttaataagctgttttcagcttatttccataag 37690674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 84
Target Start/End: Complemental strand, 1899234 - 1899187
Alignment:
Q  37 aaacagcttatgacatgttaataaggtgttttcagcttattttcataa 84  Q
    ||||||||||||||||||  ||||| |||||||||||||||| |||||    
T  1899234 aaacagcttatgacatgtgcataagttgttttcagcttatttccataa 1899187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 86
Target Start/End: Original strand, 9202736 - 9202787
Alignment:
Q  36 gaaacagcttatgacat-gttaataaggtgttttcagcttattttcataagt 86  Q
    ||||||||||||||||| ||| ||||| ||||| ||||||||||||||||||    
T  9202736 gaaacagcttatgacattgttcataagctgtttccagcttattttcataagt 9202787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 11707146 - 11707091
Alignment:
Q  26 agaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttca 81  Q
    |||||||||  ||| || |||||||||||| ||||| |||||||||||||||||||    
T  11707146 agaacttatcaaaatagattatgacatgtttataagttgttttcagcttattttca 11707091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 35963332 - 35963273
Alignment:
Q  26 agaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    ||||||||| |||| ||| ||||||||||  ||||| |||||||||||||||| ||||||    
T  35963332 agaacttatggaaatagcgtatgacatgtccataagttgttttcagcttatttccataag 35963273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 84
Target Start/End: Original strand, 10272414 - 10272468
Alignment:
Q  30 cttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataa 84  Q
    ||||| |||||| ||||||||||||   |||| ||||||||||||||||||||||    
T  10272414 cttatagaaacaacttatgacatgtctgtaagttgttttcagcttattttcataa 10272468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 29845414 - 29845471
Alignment:
Q  26 agaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataa 84  Q
    ||||||||| |||| ||||||||| | ||||||||| |||||||||||||| |||||||    
T  29845414 agaacttat-gaaaaagcttatgatacgttaataagctgttttcagcttatattcataa 29845471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 2568750 - 2568693
Alignment:
Q  25 aagaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcat 82  Q
    ||||||||||  |||||||||||||||| || ||||| | |||| |||||||||||||    
T  2568750 aagaacttatgaaaacagcttatgacatattcataagttatttttagcttattttcat 2568693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 6587097 - 6587146
Alignment:
Q  37 aaacagcttatgacatgttaataaggtgttttcagcttattttcataagt 86  Q
    ||||||||||||||| ||| ||||| ||||| ||||||||||||| ||||    
T  6587097 aaacagcttatgacaggttcataagctgtttacagcttattttcacaagt 6587146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 85
Target Start/End: Original strand, 8177521 - 8177570
Alignment:
Q  36 gaaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    |||||||||||||| ||||  ||||| ||||||||| |||||||||||||    
T  8177521 gaaacagcttatgatatgtccataagttgttttcaggttattttcataag 8177570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 10280577 - 10280637
Alignment:
Q  25 aagaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataagt 86  Q
    |||||||||| |||||||||||||| ||||  ||||| |||| ||||||||||| |||||||    
T  10280577 aagaacttatggaaacagcttatga-atgtccataagttgttatcagcttatttccataagt 10280637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 11700362 - 11700415
Alignment:
Q  31 ttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataa 84  Q
    |||| |||||| ||||||||||||  ||||| ||||||||| ||||||||||||    
T  11700362 ttatggaaacaacttatgacatgtccataagctgttttcagattattttcataa 11700415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 25461312 - 25461353
Alignment:
Q  43 cttatgacatgttaataaggtgttttcagcttattttcataa 84  Q
    ||||||||||||| || || ||||||||||||||||||||||    
T  25461312 cttatgacatgttcattagctgttttcagcttattttcataa 25461353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 37 - 85
Target Start/End: Complemental strand, 6292573 - 6292525
Alignment:
Q  37 aaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  6292573 aaacagcttatgacatgttcataagctgttttcagcttattttcataag 6292525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 28689431 - 28689490
Alignment:
Q  26 agaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    ||||||||  |||||||||||||||||||  ||||| |||||||||||||||||||||||    
T  28689431 agaacttacggaaacagcttatgacatgtccataagttgttttcagcttattttcataag 28689490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 30815643 - 30815692
Alignment:
Q  37 aaacagcttatgacatgttaataaggtgttttcagcttattttcataagt 86  Q
    ||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  30815643 aaacagcttatgacatgttcataaaatgttttcagcttattttcataagt 30815692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 38503443 - 38503504
Alignment:
Q  26 agaacttattgaaacagcttatgacat-gttaataaggtgttttcagcttattttcataagt 86  Q
    ||||||||| |||||||| |||||||| ||| ||||| ||||||||||||||||||||||||    
T  38503443 agaacttatggaaacagcctatgacattgttcataagttgttttcagcttattttcataagt 38503504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 85
Target Start/End: Original strand, 10199402 - 10199446
Alignment:
Q  41 agcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||    
T  10199402 agcttatgacatgttcataagttgttttcagcttattttcataag 10199446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 34290327 - 34290267
Alignment:
Q  26 agaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataagt 86  Q
    |||| ||||| ||| |||||||||||| || ||||| ||||||||||||||||||||||||    
T  34290327 agaatttattaaaaaagcttatgacatattcataagttgttttcagcttattttcataagt 34290267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 43338208 - 43338148
Alignment:
Q  25 aagaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    |||||||||| |||||||||||||||||||| ||||  | |||||||| ||||||||||||    
T  43338208 aagaacttatggaaacagcttatgacatgttcataatctattttcagcctattttcataag 43338148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 31517719 - 31517778
Alignment:
Q  26 agaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    |||||||||  ||||| || |||||||||| ||||| |||||||||||||||||||||||    
T  31517719 agaacttatcaaaacaactcatgacatgttcataagctgttttcagcttattttcataag 31517778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 37593680 - 37593722
Alignment:
Q  43 cttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  37593680 cttatgacatgttcataagctgttttcagcttattttcataag 37593722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 85
Target Start/End: Complemental strand, 27140559 - 27140510
Alignment:
Q  36 gaaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    |||||||||||||||||||  ||||| |||||||||||||||| ||||||    
T  27140559 gaaacagcttatgacatgtccataagttgttttcagcttatttgcataag 27140510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 85
Target Start/End: Original strand, 33723363 - 33723420
Alignment:
Q  28 aacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    ||||||| ||||||||| |||||||||| || || |||||||||||||||| ||||||    
T  33723363 aacttatggaaacagctcatgacatgttcatgagatgttttcagcttatttccataag 33723420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 35925780 - 35925723
Alignment:
Q  27 gaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataa 84  Q
    ||||||||  ||||||||||||||||||| ||||| |||||||| ||||||| |||||    
T  35925780 gaacttatgaaaacagcttatgacatgttcataagctgttttcaacttatttccataa 35925723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 41195187 - 41195232
Alignment:
Q  41 agcttatgacatgttaataaggtgttttcagcttattttcataagt 86  Q
    |||||||||||| |||||||| | ||||||||||||||||||||||    
T  41195187 agcttatgacattttaataagcttttttcagcttattttcataagt 41195232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 5886989 - 5887033
Alignment:
Q  42 gcttatgacatgttaataaggtgttttcagcttattttcataagt 86  Q
    |||||||||||||| ||||| |||||||||||||||||| |||||    
T  5886989 gcttatgacatgttcataagttgttttcagcttattttcgtaagt 5887033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 85
Target Start/End: Complemental strand, 10854813 - 10854765
Alignment:
Q  37 aaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    ||||||||||||||||||| | ||| |||||||||||||||||| ||||    
T  10854813 aaacagcttatgacatgttcacaagctgttttcagcttattttcttaag 10854765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 85
Target Start/End: Original strand, 11639406 - 11639454
Alignment:
Q  37 aaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    ||||||||||||||||||  ||||| |||||| ||||||||||||||||    
T  11639406 aaacagcttatgacatgtccataagctgtttttagcttattttcataag 11639454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 85
Target Start/End: Original strand, 38170680 - 38170728
Alignment:
Q  37 aaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    ||||||||||||||||||| ||||| |||||||||||| ||||| ||||    
T  38170680 aaacagcttatgacatgttcataagttgttttcagcttgttttcctaag 38170728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 82
Target Start/End: Original strand, 1565527 - 1565570
Alignment:
Q  39 acagcttatgacatgttaataaggtgttttcagcttattttcat 82  Q
    ||||||||||||||||  ||||| ||||||||||||||||||||    
T  1565527 acagcttatgacatgtgcataagctgttttcagcttattttcat 1565570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 86
Target Start/End: Complemental strand, 10809419 - 10809376
Alignment:
Q  43 cttatgacatgttaataaggtgttttcagcttattttcataagt 86  Q
    ||||||||||||| ||||  ||||||||||||||||||||||||    
T  10809419 cttatgacatgtttataatatgttttcagcttattttcataagt 10809376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 21012881 - 21012822
Alignment:
Q  26 agaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    ||||||| | |||||||||||||||||||  ||||| |||||||||||| ||||| ||||    
T  21012881 agaacttgtagaaacagcttatgacatgtcgataagatgttttcagcttgttttcgtaag 21012822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 78
Target Start/End: Complemental strand, 3223748 - 3223706
Alignment:
Q  36 gaaacagcttatgacatgttaataaggtgttttcagcttattt 78  Q
    |||||| ||||||||||||| ||||| ||||||||||||||||    
T  3223748 gaaacaacttatgacatgtttataagttgttttcagcttattt 3223706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 86
Target Start/End: Complemental strand, 4576878 - 4576836
Alignment:
Q  44 ttatgacatgttaataaggtgttttcagcttattttcataagt 86  Q
    |||||||||||| ||||| ||| ||||||||||||||||||||    
T  4576878 ttatgacatgtttataagttgtgttcagcttattttcataagt 4576836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 85
Target Start/End: Complemental strand, 4868482 - 4868432
Alignment:
Q  35 tgaaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    ||||||| |||||||||||| |||||| |||||||| ||||||| ||||||    
T  4868482 tgaaacaacttatgacatgtcaataagttgttttcaacttatttacataag 4868432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 86
Target Start/End: Complemental strand, 10799535 - 10799493
Alignment:
Q  44 ttatgacatgttaataaggtgttttcagcttattttcataagt 86  Q
    |||||||||||| ||||  ||||||||||||||||||||||||    
T  10799535 ttatgacatgtttataatctgttttcagcttattttcataagt 10799493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 31118132 - 31118074
Alignment:
Q  28 aacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataagt 86  Q
    |||||||  ||||| ||||||||||||| || || |||||||||||||||| |||||||    
T  31118132 aacttatgaaaacatcttatgacatgttcatcagttgttttcagcttatttccataagt 31118074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 46252678 - 46252720
Alignment:
Q  43 cttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    ||||||||||||| ||||| ||||||||| |||||||||||||    
T  46252678 cttatgacatgttcataagttgttttcaggttattttcataag 46252720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 1509961 - 1510002
Alignment:
Q  43 cttatgacatgttaataaggtgttttcagcttattttcataa 84  Q
    ||||||||||||| || || ||||||||||||||||||||||    
T  1509961 cttatgacatgttcattagctgttttcagcttattttcataa 1510002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 7136976 - 7137037
Alignment:
Q  25 aagaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataagt 86  Q
    ||||||||||  |||  ||||||||||| || ||||| | ||||||||||||||||||||||    
T  7136976 aagaacttatgaaaatcgcttatgacatattcataagttattttcagcttattttcataagt 7137037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 86
Target Start/End: Complemental strand, 10744381 - 10744332
Alignment:
Q  37 aaacagcttatgacatgttaataaggtgttttcagcttattttcataagt 86  Q
    |||||||||||| |||||| ||||| |||||||| |||||||| ||||||    
T  10744381 aaacagcttatggcatgttcataagctgttttcatcttatttttataagt 10744332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 85
Target Start/End: Complemental strand, 11695942 - 11695893
Alignment:
Q  36 gaaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    ||||||| |||||||||||  ||||| |||||||| ||||||||||||||    
T  11695942 gaaacagtttatgacatgtccataagctgttttcaacttattttcataag 11695893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 12564493 - 12564538
Alignment:
Q  41 agcttatgacatgttaataaggtgttttcagcttattttcataagt 86  Q
    ||||||||||| || |||||| |||||||||||||||| |||||||    
T  12564493 agcttatgacaagtcaataagttgttttcagcttatttccataagt 12564538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 25479654 - 25479613
Alignment:
Q  44 ttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    |||||||||||| || || |||||||||||||||||||||||    
T  25479654 ttatgacatgttcattagttgttttcagcttattttcataag 25479613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 85
Target Start/End: Complemental strand, 26184829 - 26184780
Alignment:
Q  36 gaaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    |||||||||||||||||||  ||||| ||||||||| |||||| ||||||    
T  26184829 gaaacagcttatgacatgtccataagctgttttcagattatttccataag 26184780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 29635420 - 29635383
Alignment:
Q  44 ttatgacatgttaataaggtgttttcagcttattttca 81  Q
    |||||||||||| ||||| |||||||||||||||||||    
T  29635420 ttatgacatgtttataagttgttttcagcttattttca 29635383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 47877182 - 47877141
Alignment:
Q  44 ttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    |||||||||| | ||||| |||||||||||||||||||||||    
T  47877182 ttatgacatgctcataagttgttttcagcttattttcataag 47877141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.000000000001; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 6978941 - 6978999
Alignment:
Q  26 agaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataa 84  Q
    |||||||||||||| | ||||||||||||  ||||| ||||||||||||||||||||||    
T  6978941 agaacttattgaaataacttatgacatgtctataagctgttttcagcttattttcataa 6978999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 1133016 - 1132967
Alignment:
Q  30 cttattgaaacagcttatgacatgttaataaggtgttttcagcttatttt 79  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||||||||||    
T  1133016 cttatagaaacagctcatgacatgtcaataaggtgttttcagcttatttt 1132967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 84
Target Start/End: Original strand, 21592989 - 21593043
Alignment:
Q  30 cttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataa 84  Q
    ||||||||| |||||||||||||||| ||||| || ||||||||||||| |||||    
T  21592989 cttattgaagcagcttatgacatgtttataagctgctttcagcttatttccataa 21593043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 13126553 - 13126626
Alignment:
Q  25 aagaacttattgaaacagcttatgacatgt-taataaggtgttttcagcttattttcataagtcatcgaagata 97  Q
    ||||||||||  |||||||||||||||| | | ||||| | ||||||||||||||||||||||  |||||||||    
T  13126553 aagaacttataaaaacagcttatgacatttatcataagcttttttcagcttattttcataagttctcgaagata 13126626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 25571351 - 25571298
Alignment:
Q  26 agaacttattgaaacagcttatgacatgttaataaggtgttttcagcttatttt 79  Q
    ||||||||| ||||||| |||||| ||||| ||||| |||||||||||||||||    
T  25571351 agaacttatggaaacagtttatgatatgttcataagctgttttcagcttatttt 25571298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 29263454 - 29263409
Alignment:
Q  33 attgaaacagcttatgacatgttaataaggtgttttcagcttattt 78  Q
    ||||||||||||||||| ||||| ||||| ||||||||||||||||    
T  29263454 attgaaacagcttatgatatgttcataagttgttttcagcttattt 29263409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 85
Target Start/End: Original strand, 52746829 - 52746878
Alignment:
Q  36 gaaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    ||||||||||| |||||||| ||||| ||||||||||| |||||||||||    
T  52746829 gaaacagcttaagacatgttcataagctgttttcagctgattttcataag 52746878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 23459719 - 23459659
Alignment:
Q  26 agaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataagt 86  Q
    |||||||||  ||| ||||||||||||||||||||| | |||||| ||||| |||||||||    
T  23459719 agaacttatgaaaaaagcttatgacatgttaataagttattttcaacttatattcataagt 23459659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 1137803 - 1137744
Alignment:
Q  26 agaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    |||||||||  ||||| ||||||||||||| ||||| ||||||||| |||||| ||||||    
T  1137803 agaacttatgaaaacatcttatgacatgttcataagttgttttcagtttatttccataag 1137744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 83
Target Start/End: Complemental strand, 24747396 - 24747353
Alignment:
Q  40 cagcttatgacatgttaataaggtgttttcagcttattttcata 83  Q
    ||||| |||||||||| ||||| |||||||||||||||||||||    
T  24747396 cagctaatgacatgttcataagttgttttcagcttattttcata 24747353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 84
Target Start/End: Complemental strand, 44249365 - 44249318
Alignment:
Q  37 aaacagcttatgacatgttaataaggtgttttcagcttattttcataa 84  Q
    ||||||||||||||||||| ||||| | | ||||||||||||||||||    
T  44249365 aaacagcttatgacatgttgataagttttcttcagcttattttcataa 44249318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 85
Target Start/End: Complemental strand, 24929579 - 24929525
Alignment:
Q  31 ttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    |||| ||||||||||||| |||||| ||||  |||||||||||||||| ||||||    
T  24929579 ttatggaaacagcttatggcatgttcataaattgttttcagcttatttccataag 24929525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 84
Target Start/End: Original strand, 29467607 - 29467661
Alignment:
Q  30 cttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataa 84  Q
    ||||| ||||| |||||||||||||  ||||| |||||||||||||||| |||||    
T  29467607 cttatagaaacggcttatgacatgtccataagctgttttcagcttatttccataa 29467661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 4691937 - 4691880
Alignment:
Q  28 aacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    ||||||| |||||| |||||||||||   ||| | |||||||||||||||||||||||    
T  4691937 aacttatggaaacaacttatgacatgcccatatgttgttttcagcttattttcataag 4691880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 22236090 - 22236143
Alignment:
Q  32 tattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    |||| ||||||||| ||||||||| || || ||||||| |||||||||||||||    
T  22236090 tattaaaacagcttgtgacatgttcatgagctgttttctgcttattttcataag 22236143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.000000000001; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 7035544 - 7035606
Alignment:
Q  25 aagaacttattgaaacagcttatgacat-gttaataaggtgttttcagcttattttcataagt 86  Q
    |||||||||| ||||||||||||||||  ||| ||||||||||||| ||||||||||||||||    
T  7035544 aagaacttatggaaacagcttatgacacagttcataaggtgttttccgcttattttcataagt 7035606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 1647328 - 1647268
Alignment:
Q  25 aagaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    ||||||||||  ||||||||||||||||| | ||||| |||||||||||||||| ||||||    
T  1647328 aagaacttatgaaaacagcttatgacatgctcataagctgttttcagcttatttccataag 1647268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 38809417 - 38809358
Alignment:
Q  26 agaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    |||||||||| || |||||||||||||||||||||  |||||||| ||||||| ||||||    
T  38809417 agaacttattaaaccagcttatgacatgttaataatctgttttcaacttatttccataag 38809358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 27237872 - 27237930
Alignment:
Q  26 agaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataa 84  Q
    ||||||||| |||||||||||||||||||  ||||| |||||| ||||||||| |||||    
T  27237872 agaacttatagaaacagcttatgacatgtacataagctgtttttagcttatttccataa 27237930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 40158808 - 40158750
Alignment:
Q  27 gaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    ||||||||  ||||||||||||||||||| ||||| ||||||||||||| || ||||||    
T  40158808 gaacttatgaaaacagcttatgacatgtttataagttgttttcagcttaattacataag 40158750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 86
Target Start/End: Complemental strand, 680583 - 680534
Alignment:
Q  37 aaacagcttatgacatgttaataaggtgttttcagcttattttcataagt 86  Q
    ||||||||||||||||||| ||||  ||||||||||||||||||| ||||    
T  680583 aaacagcttatgacatgtttataaactgttttcagcttattttcacaagt 680534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 29316765 - 29316814
Alignment:
Q  37 aaacagcttatgacatgttaataaggtgttttcagcttattttcataagt 86  Q
    ||||||||||||||||||| ||||| | |||||||||||||| |||||||    
T  29316765 aaacagcttatgacatgttcataagttcttttcagcttatttccataagt 29316814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 44606088 - 44606149
Alignment:
Q  25 aagaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataagt 86  Q
    ||||||||||  ||||| ||||||||||||  ||||| ||||||||||| ||||||||||||    
T  44606088 aagaacttatgaaaacaacttatgacatgtccataagttgttttcagctgattttcataagt 44606149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 85
Target Start/End: Original strand, 35379006 - 35379054
Alignment:
Q  37 aaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    |||||||| ||||| |||| ||||| |||||||||||||||||||||||    
T  35379006 aaacagctgatgacttgttcataagttgttttcagcttattttcataag 35379054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 97
Target Start/End: Complemental strand, 787423 - 787352
Alignment:
Q  26 agaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataagtcatcgaagata 97  Q
    |||||||||  ||||||||||||||||||  ||||| |||||||||||||| | |||||  |||| ||||||    
T  787423 agaacttatgaaaacagcttatgacatgtccataagctgttttcagcttatctccataaaccatctaagata 787352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 8820275 - 8820330
Alignment:
Q  30 cttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    ||||| |||||||||| ||||||||| | ||| |||||||||||||||| ||||||    
T  8820275 cttatggaaacagcttctgacatgttcacaagctgttttcagcttatttccataag 8820330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 28677638 - 28677697
Alignment:
Q  26 agaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    |||||||||  |||||||||||||||| || ||||| ||||||| |||||||| ||||||    
T  28677638 agaacttatgaaaacagcttatgacattttcataagttgttttcggcttatttccataag 28677697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 35378511 - 35378570
Alignment:
Q  26 agaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    |||||||||  |||||||| ||||| |||| ||||| | |||||||||||||||||||||    
T  35378511 agaacttatgaaaacagctgatgacttgttcataagttattttcagcttattttcataag 35378570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 5902527 - 5902581
Alignment:
Q  25 aagaacttattgaaacagcttatgacatgttaataaggtgttttcagcttatttt 79  Q
    ||||||||||  ||||||||||||||||||| ||||  |||||||||||| ||||    
T  5902527 aagaacttatgaaaacagcttatgacatgttcataaactgttttcagcttgtttt 5902581  T

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Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 83
Target Start/End: Complemental strand, 33256820 - 33256774
Alignment:
Q  37 aaacagcttatgacatgttaataaggtgttttcagcttattttcata 83  Q
    ||||||||||||||||||| ||||  |||| ||||||||||||||||    
T  33256820 aaacagcttatgacatgttcataaactgttctcagcttattttcata 33256774  T

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Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 45314959 - 45314901
Alignment:
Q  26 agaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataa 84  Q
    |||||||||  ||||| |||||||||| || ||||| ||||||||| ||||||||||||    
T  45314959 agaacttatgtaaacaacttatgacatatttataagttgttttcagtttattttcataa 45314901  T

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Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 10567138 - 10567093
Alignment:
Q  36 gaaacagcttatgacatgttaataaggtgttttcagcttattttca 81  Q
    |||||||||||||||||| | ||||| ||||||||||| |||||||    
T  10567138 gaaacagcttatgacatgatcataagttgttttcagctaattttca 10567093  T

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Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 85
Target Start/End: Complemental strand, 14666629 - 14666580
Alignment:
Q  36 gaaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    |||||| ||||||||||||| ||| | |||||||| ||||||||||||||    
T  14666629 gaaacaacttatgacatgttcataggttgttttcaccttattttcataag 14666580  T

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Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 33319807 - 33319851
Alignment:
Q  41 agcttatgacatgttaataaggtgttttcagcttattttcataagt 86  Q
    |||||||||||| |||||||| | ||||||||||||||||||||||    
T  33319807 agcttatgacat-ttaataagcttttttcagcttattttcataagt 33319851  T

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Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 40682373 - 40682434
Alignment:
Q  26 agaacttattgaaacagcttatgacat-gttaataaggtgttttcagcttattttcataagt 86  Q
    ||||||| || ||| |||||||||||| ||| ||||| |||||||| |||||||||||||||    
T  40682373 agaacttgttaaaatagcttatgacattgttcataagttgttttcaacttattttcataagt 40682434  T

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Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 85
Target Start/End: Original strand, 41809234 - 41809283
Alignment:
Q  36 gaaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    |||||| ||||||||||||| ||||| |||||| ||||||||| ||||||    
T  41809234 gaaacaacttatgacatgttcataagttgtttttagcttatttccataag 41809283  T

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Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 85
Target Start/End: Original strand, 43717117 - 43717174
Alignment:
Q  28 aacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataag 85  Q
    |||||||  |||||||||| ||||| || ||| | |||||||||||||||||||||||    
T  43717117 aacttatgaaaacagcttaggacattttcataggttgttttcagcttattttcataag 43717174  T

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Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 78
Target Start/End: Original strand, 44438829 - 44438870
Alignment:
Q  37 aaacagcttatgacatgttaataaggtgttttcagcttattt 78  Q
    ||||||||||||||||||| ||||  ||||||||||||||||    
T  44438829 aaacagcttatgacatgttcataacctgttttcagcttattt 44438870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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