View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7385_low_2 (Length: 464)
Name: NF7385_low_2
Description: NF7385
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7385_low_2 |
 | |
|
| [»] scaffold1521 (1 HSPs) |
| | |
|
| [»] scaffold0152 (2 HSPs) |
| | |
|
Alignment Details
Target: scaffold1521 (Bit Score: 370; Significance: 0; HSPs: 1)
Name: scaffold1521
Description:
Target: scaffold1521; HSP #1
Raw Score: 370; E-Value: 0
Query Start/End: Original strand, 12 - 445
Target Start/End: Original strand, 136 - 566
Alignment:
| Q |
12 |
tattctaaggtgcaatttgcttatgtgtcagctcaccaataccctatttttaatctaaagcattctcctactttgcttatgtgtctctccctcaaaccat |
111 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
136 |
tattctaaggtgcaatttgcttatgtgtcagctcaccaataccctatttttaatcttaagcattctcctactttgcttatgtgtctctccctcaaaccat |
235 |
T |
|
| Q |
112 |
tgcttcatattttaatcattcataatctatatatactttaaatcacttctttataaagtacataattcattgctagactctatgaatttctaacgtacat |
211 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
236 |
tgcttcatattttaatcattcataatctata--tactttaaatcactcctttataaagtacataattcattgctagactctgtgaatttctaacgtacat |
333 |
T |
|
| Q |
212 |
aattcattgcaataaaagaattagtttagtaatctatggatttcatagtatatattgtaccttctccaagagaaacacggtggtttttaattctaagttt |
311 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
334 |
aattcattgcaataaaagaattagtttagtaatctatggatttcatagtatatattgtaccttctccaagagaaacacggtggtttttaattctaagttt |
433 |
T |
|
| Q |
312 |
tggttggtggatttggcaattaggagtatannnnnnnnagtttactctctctatgttgtaaccagacgagtaaaagaatgtatttttaaaagttgttctt |
411 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |
|
|
| T |
434 |
tggttggtggatttggcaattaggagtata-tttttttagtttactctctctatgttgtaaccagacgagtaaaaggatatatttttaaaagttgttctt |
532 |
T |
|
| Q |
412 |
ttaattctttcttttgctgcccatacaaagacta |
445 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| |
|
|
| T |
533 |
ttaattctttcttttgctgccaatacaaagacta |
566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0152 (Bit Score: 370; Significance: 0; HSPs: 2)
Name: scaffold0152
Description:
Target: scaffold0152; HSP #1
Raw Score: 370; E-Value: 0
Query Start/End: Original strand, 12 - 445
Target Start/End: Complemental strand, 30583 - 30153
Alignment:
| Q |
12 |
tattctaaggtgcaatttgcttatgtgtcagctcaccaataccctatttttaatctaaagcattctcctactttgcttatgtgtctctccctcaaaccat |
111 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30583 |
tattctaaggtgcaatttgcttatgtgtcagctcaccaataccctatttttaatcttaagcattctcctactttgcttatgtgtctctccctcaaaccat |
30484 |
T |
|
| Q |
112 |
tgcttcatattttaatcattcataatctatatatactttaaatcacttctttataaagtacataattcattgctagactctatgaatttctaacgtacat |
211 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
30483 |
tgcttcatattttaatcattcataatctatata--ctttaaatcactcctttataaagtacataattcattgctagactctgtgaatttctaacgtacat |
30386 |
T |
|
| Q |
212 |
aattcattgcaataaaagaattagtttagtaatctatggatttcatagtatatattgtaccttctccaagagaaacacggtggtttttaattctaagttt |
311 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30385 |
aattcattgcaataaaagaattagtttagtaatctatggatttcatagtatatattgtaccttctccaagagaaacacggtggtttttaattctaagttt |
30286 |
T |
|
| Q |
312 |
tggttggtggatttggcaattaggagtatannnnnnnnagtttactctctctatgttgtaaccagacgagtaaaagaatgtatttttaaaagttgttctt |
411 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |
|
|
| T |
30285 |
tggttggtggatttggcaattaggagtata-tttttttagtttactctctctatgttgtaaccagacgagtaaaaggatatatttttaaaagttgttctt |
30187 |
T |
|
| Q |
412 |
ttaattctttcttttgctgcccatacaaagacta |
445 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| |
|
|
| T |
30186 |
ttaattctttcttttgctgccaatacaaagacta |
30153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0152; HSP #2
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 12 - 308
Target Start/End: Complemental strand, 31374 - 31079
Alignment:
| Q |
12 |
tattctaaggtgcaatttgcttatgtgtcagctcaccaataccctatttttaatctaaagcattctcctactttgcttatgtgtctctccctcaaaccat |
111 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31374 |
tattctaaggtgcaatttgcttatgtgtcagctcaccaataccctatttttaatcttaagcattctcctactttgcttatgtgtctctccctcaaaccat |
31275 |
T |
|
| Q |
112 |
tgcttcatattttaatcattcataatctatatatactttaaatcacttctttataaagtacataattcattgctagactctatgaatttctaacgtacat |
211 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
31274 |
tgcttcatattttaatcattcataatctatata--ctttaaatcactcctttataaagtacataattcattgctagactctgtgaatttctaacgtacat |
31177 |
T |
|
| Q |
212 |
aattcattgcaataaaagaattagtttagtaatctatggatttcatagtatatattgtaccttct-ccaagagaaacacggtggtttttaattctaag |
308 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
31176 |
aattcattgcaataaaagaattagtttagtaatctatggatttcatagtatatattgtaccttctcccaagagaaacacggtggtttttaattctaag |
31079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 135; Significance: 4e-70; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 243 - 445
Target Start/End: Original strand, 10183271 - 10183473
Alignment:
| Q |
243 |
atctatggatttcatagtatatattgtaccttctccaagagaaa-cacggtggtttttaattctaagttttggttggtggatttggcaattaggagtata |
341 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||| ||||||||||||| | |||| |
|
|
| T |
10183271 |
atctatggatttcatagtatatattgtaccttctccaagagaaaacacggtggttcttaattctaagtttcggttggtgtatttggcaattagcaatata |
10183370 |
T |
|
| Q |
342 |
nnnnnnnnagtttactctctctatgttgtaaccagacgagtaaaagaatgtatttttaaaagttgttcttttaattctttcttttgctgcccatacaaag |
441 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
10183371 |
gtttttg-agtttactctctctatgttgtaaccaggcgagtaaaaggatgtatttttaaaagttgttcttttaattctttcttttgttgcccatacaaag |
10183469 |
T |
|
| Q |
442 |
acta |
445 |
Q |
| |
|
|||| |
|
|
| T |
10183470 |
acta |
10183473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 10183011 - 10183136
Alignment:
| Q |
12 |
tattctaaggtgcaatttgcttatgtgtcagctcaccaataccctatttttaatctaaagcattctcctactttgcttatgtgtctctccctcaaaccat |
111 |
Q |
| |
|
||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10183011 |
tattctaaggtgcaagttgcttatttgtcagctcaccaataccccatttttaatcttaagcattctcctactttgcttatgtgtctctccctcaaaccat |
10183110 |
T |
|
| Q |
112 |
tgcttcatattttaatcattcataat |
137 |
Q |
| |
|
| | ||||||||||||||||||||| |
|
|
| T |
10183111 |
ttccccatattttaatcattcataat |
10183136 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 124; Significance: 1e-63; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 243 - 445
Target Start/End: Complemental strand, 39063338 - 39063138
Alignment:
| Q |
243 |
atctatggatttcatagtatatattgtaccttctccaagagaaa-cacggtggtttttaattctaagttttggttggtggatttggcaattaggagtata |
341 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||| ||||||||||||| | |||| |
|
|
| T |
39063338 |
atctatggatttcatagtatatattgtaccttctccaagagaaaacacggtggttcttaattctaagtttcggttggtgtatttggcaattagcaatata |
39063239 |
T |
|
| Q |
342 |
nnnnnnnnagtttactctctctatgttgtaaccagacgagtaaaagaatgtatttttaaaagttgttcttttaattctttcttttgctgcccatacaaag |
441 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
39063238 |
gtttttg-agtttactctct--atgttgtaaccaggcgagtaaaaggatgtatttttaaaagttgttcttttaattctttcttttgttgcccatacaaag |
39063142 |
T |
|
| Q |
442 |
acta |
445 |
Q |
| |
|
|||| |
|
|
| T |
39063141 |
acta |
39063138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 12 - 137
Target Start/End: Complemental strand, 39063598 - 39063473
Alignment:
| Q |
12 |
tattctaaggtgcaatttgcttatgtgtcagctcaccaataccctatttttaatctaaagcattctcctactttgcttatgtgtctctccctcaaaccat |
111 |
Q |
| |
|
||||||||||| ||| |||||||| |||||| ||||||||| || ||||||||||| ||||||||||||||||| |||||||||||||||||||||| || |
|
|
| T |
39063598 |
tattctaaggtacaagttgcttatttgtcagttcaccaatatcccatttttaatcttaagcattctcctacttttcttatgtgtctctccctcaaacaat |
39063499 |
T |
|
| Q |
112 |
tgcttcatattttaatcattcataat |
137 |
Q |
| |
|
||| |||||||||||||||||||||| |
|
|
| T |
39063498 |
tgcctcatattttaatcattcataat |
39063473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 360 - 446
Target Start/End: Original strand, 47140804 - 47140890
Alignment:
| Q |
360 |
ctctatgttgtaaccagacgagtaaaagaatgtatttttaaaagttgttcttttaat-tctttcttttgctgcccatacaaagactaa |
446 |
Q |
| |
|
||||||| | |||||| |||||||| | |||| ||||| |||||||||||||||||| | ||||||||| |||||||||| ||||||| |
|
|
| T |
47140804 |
ctctatgatataaccatacgagtaacaaaatgaatttt-aaaagttgttcttttaatatttttcttttgttgcccatacatagactaa |
47140890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 124
Target Start/End: Original strand, 47140444 - 47140501
Alignment:
| Q |
67 |
taaagcattctcctactttgcttatgtgtctctccctcaaaccattgcttcatatttt |
124 |
Q |
| |
|
|||||||||||||||| ||||||||||||| ||| |||||| ||||| |||| |||| |
|
|
| T |
47140444 |
taaagcattctcctaccttgcttatgtgtccttccatcaaactattgcctcatttttt |
47140501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 112
Target Start/End: Complemental strand, 47933904 - 47933864
Alignment:
| Q |
72 |
cattctcctactttgcttatgtgtctctccctcaaaccatt |
112 |
Q |
| |
|
|||||| |||||||||||||||||| |||| |||||||||| |
|
|
| T |
47933904 |
cattctactactttgcttatgtgtcactccttcaaaccatt |
47933864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 124; Significance: 1e-63; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 243 - 445
Target Start/End: Original strand, 18878025 - 18878225
Alignment:
| Q |
243 |
atctatggatttcatagtatatattgtaccttctccaagagaaa-cacggtggtttttaattctaagttttggttggtggatttggcaattaggagtata |
341 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||| ||||||||||||| | |||| |
|
|
| T |
18878025 |
atctatggatttcatagtatatattgtaccttctccaagagaaaacacggtggttcttaattctaagtttcggttggtgtatttggcaattagcaatata |
18878124 |
T |
|
| Q |
342 |
nnnnnnnnagtttactctctctatgttgtaaccagacgagtaaaagaatgtatttttaaaagttgttcttttaattctttcttttgctgcccatacaaag |
441 |
Q |
| |
|
|||||||||| ||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18878125 |
gtttttg-agtttactct--ctatgttgtaaccaggcgagtaaaaggatgtattttaaaaagttgttcttttaattctttcttttgctgcccatacaaag |
18878221 |
T |
|
| Q |
442 |
acta |
445 |
Q |
| |
|
|||| |
|
|
| T |
18878222 |
acta |
18878225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 18877764 - 18877890
Alignment:
| Q |
12 |
tattctaaggtgcaatttgcttatgtgtcagctcaccaataccctatttttaatctaaagcattctcctactttgcttatgtgtctctccctcaaaccat |
111 |
Q |
| |
|
||||||||||| ||| || ||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||| || |
|
|
| T |
18877764 |
tattctaaggtacaagttacttatttgtcagctcaccaataccccatttttaatcttaagcattctcctacttttcttatgtgtctctccctcaaacaat |
18877863 |
T |
|
| Q |
112 |
tgcttcata-ttttaatcattcataat |
137 |
Q |
| |
|
||| ||||| ||||||||||||||||| |
|
|
| T |
18877864 |
tgcctcatatttttaatcattcataat |
18877890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 112
Target Start/End: Original strand, 16856000 - 16856040
Alignment:
| Q |
72 |
cattctcctactttgcttatgtgtctctccctcaaaccatt |
112 |
Q |
| |
|
|||||| |||||||||||||||||| |||| |||||||||| |
|
|
| T |
16856000 |
cattctactactttgcttatgtgtcactccttcaaaccatt |
16856040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 124; Significance: 1e-63; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 243 - 445
Target Start/End: Complemental strand, 33518610 - 33518410
Alignment:
| Q |
243 |
atctatggatttcatagtatatattgtaccttctccaagagaaa-cacggtggtttttaattctaagttttggttggtggatttggcaattaggagtata |
341 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||| ||||||||||||| | |||| |
|
|
| T |
33518610 |
atctatggatttcatagtatatattgtaccttctccaagagaaaacacggtggttcttaattctaagtttcggttggtgtatttggcaattagcaatata |
33518511 |
T |
|
| Q |
342 |
nnnnnnnnagtttactctctctatgttgtaaccagacgagtaaaagaatgtatttttaaaagttgttcttttaattctttcttttgctgcccatacaaag |
441 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33518510 |
gtttttg-agtttactctct--atgttgtaaccaggcgagtaaaaggatgtattttaaaaagttgttcttttaattctttcttttgctgcccatacaaag |
33518414 |
T |
|
| Q |
442 |
acta |
445 |
Q |
| |
|
|||| |
|
|
| T |
33518413 |
acta |
33518410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 12 - 137
Target Start/End: Complemental strand, 33518871 - 33518745
Alignment:
| Q |
12 |
tattctaaggtgcaatttgcttatgtgtcagctcaccaataccctatttttaatctaaagcattctcctactttgcttatgtgtctctccctcaaaccat |
111 |
Q |
| |
|
||||||||||| ||| |||||||| |||||| ||||||||| || ||||||||||| ||||||||||||||||| |||||||||||||||||||||| || |
|
|
| T |
33518871 |
tattctaaggtacaagttgcttatttgtcagttcaccaatatcccatttttaatcttaagcattctcctacttttcttatgtgtctctccctcaaacaat |
33518772 |
T |
|
| Q |
112 |
tgcttcata-ttttaatcattcataat |
137 |
Q |
| |
|
||| ||||| ||||||||||||||||| |
|
|
| T |
33518771 |
tgcctcatatttttaatcattcataat |
33518745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 112
Target Start/End: Complemental strand, 54946706 - 54946666
Alignment:
| Q |
72 |
cattctcctactttgcttatgtgtctctccctcaaaccatt |
112 |
Q |
| |
|
|||||| |||||||||||||||||| |||| |||||||||| |
|
|
| T |
54946706 |
cattctactactttgcttatgtgtcactccttcaaaccatt |
54946666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 360 - 446
Target Start/End: Original strand, 29679507 - 29679593
Alignment:
| Q |
360 |
ctctatgttgtaaccagacgagtaaaagaatgtatttttaaaagttgttcttttaat-tctttcttttgctgcccatacaaagactaa |
446 |
Q |
| |
|
||||||| | |||||| |||||||| | |||| ||||| |||||||||||||||||| | |||||||||||||||||||| ||||||| |
|
|
| T |
29679507 |
ctctatgatataaccatacgagtaacaaaatgaatttt-aaaagttgttcttttaatatttttcttttgctgcccatacatagactaa |
29679593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 333
Target Start/End: Original strand, 29716583 - 29716670
Alignment:
| Q |
246 |
tatggatttcatagtatatattgtaccttctccaagagaaacacggtggtttttaattctaagttttggttggtggatttggcaatta |
333 |
Q |
| |
|
||||||||||| | ||||||||| |||||||||||||| |||| ||||| | |||||| | |||||| ||| || ||||||||||| |
|
|
| T |
29716583 |
tatggatttcacaatatatattgcaccttctccaagagtaacatggtggctcttaattttgggttttgcttgatgtgtttggcaatta |
29716670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 29679113 - 29679166
Alignment:
| Q |
71 |
gcattctcctactttgcttatgtgtctctccctcaaaccattgcttcatatttt |
124 |
Q |
| |
|
|||||||||||||||||||||||||| ||| |||||| ||||| |||| |||| |
|
|
| T |
29679113 |
gcattctcctactttgcttatgtgtccttccatcaaactattgcctcatttttt |
29679166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 72 - 112
Target Start/End: Complemental strand, 2501802 - 2501762
Alignment:
| Q |
72 |
cattctcctactttgcttatgtgtctctccctcaaaccatt |
112 |
Q |
| |
|
|||||| |||||||||||||||||| ||||||||||||||| |
|
|
| T |
2501802 |
cattcttctactttgcttatgtgtcactccctcaaaccatt |
2501762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 112
Target Start/End: Original strand, 43942207 - 43942247
Alignment:
| Q |
72 |
cattctcctactttgcttatgtgtctctccctcaaaccatt |
112 |
Q |
| |
|
|||||| ||||| |||||||||||| ||||||||||||||| |
|
|
| T |
43942207 |
cattcttctactctgcttatgtgtcactccctcaaaccatt |
43942247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University