View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7386_low_14 (Length: 263)
Name: NF7386_low_14
Description: NF7386
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7386_low_14 |
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Alignment Details
Target: chr4 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 21 - 261
Target Start/End: Original strand, 785810 - 786050
Alignment:
| Q |
21 |
accgaaacaacccttagggttggaataataccgttgcattttagtgttaagttttaactcatttgaactcaaaatctcttgttaagtgggaagaaatcta |
120 |
Q |
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| T |
785810 |
accgagacaacccttagggttggaataatacagttgcattttagtgttaagtttgaactcatttgaactcaaaatctcttgttaaatgggaagaaatcta |
785909 |
T |
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| Q |
121 |
attctaaaccatttcattgttcatgatttagttaattaattgcactacatatttgtttcgtaagggataaaaaagtggagatgcttagatacaaataaga |
220 |
Q |
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| T |
785910 |
attctaaaccatttcattgttcatgatttagttaattaattgcactacatatttgtttcgtaagggataaaaaagtggagatgcttagatacaaataaga |
786009 |
T |
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| Q |
221 |
ggaatgccaacaacgtatatttaacacatattcttcgacat |
261 |
Q |
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| T |
786010 |
ggaatgccaacgacgtatatttaacacatatttttcaacat |
786050 |
T |
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