View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7386_low_5 (Length: 542)
Name: NF7386_low_5
Description: NF7386
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7386_low_5 |
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Alignment Details
Target: chr8 (Bit Score: 467; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 467; E-Value: 0
Query Start/End: Original strand, 37 - 530
Target Start/End: Original strand, 31523723 - 31524217
Alignment:
| Q |
37 |
atttttgtaacactactaacatatgatatcttatatccatcac-atcattaatttatttttctttcaagatgtaaaatgaatatgggatgtccaaaaata |
135 |
Q |
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|||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31523723 |
atttttgtaacactgctaacatatgatatcttatatctatcactatcattaatttatttttctttcaagatgtaaaatgaatatgggatgtccaaaaata |
31523822 |
T |
|
| Q |
136 |
actttcttcagcttatatattctcatctctatgctcacttcttcactacataattcttcattatggatttgtacaagccaacacacattgtcttgctttc |
235 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31523823 |
actttcttcagcttatatattctcatctctatgctcacttcttcactacataattcttcattatggatttgtacaagccaacacacattgtcttgctttc |
31523922 |
T |
|
| Q |
236 |
aagcccaggtctaggccatctcatgcctatcatcgagctagctaaacgcttccaaatccaccacaatttcaaactcacaatcctcgccatcacttctcaa |
335 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31523923 |
aagcccaggtctaggccatctcatgcctatcatcgagctagctaaacgcttccaaatccaccacaatttcaaactcacaatcctcgccatcacttctcaa |
31524022 |
T |
|
| Q |
336 |
acctcacacactgaatctcatattctcaaatcagccaccaacccctcactctacaacatcatccaaatcccatcaccaaacatttcctccctcctccccg |
435 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31524023 |
acctcacacactgaatctcatattctcaaatcagccaccaacccctcactctacaacatcatccaaatcccatcaccaaacatttcctccctcctccccg |
31524122 |
T |
|
| Q |
436 |
tctccgccaccgtctgcacccgcatctttctaacaatgcgccactccatacctttcatcaaatccgcactcacaaacttaaccctccctccttct |
530 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||| |
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| T |
31524123 |
tctccgccaccgtctgcacccgcatctttctaacaatgcgccattccataccttccatcaaatctgcactcacaaacttaaccctccctccttct |
31524217 |
T |
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