View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7387_high_1 (Length: 372)
Name: NF7387_high_1
Description: NF7387
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7387_high_1 |
 | |
|
| [»] chr1 (1 HSPs) |
| |
|
| [»] chr3 (29 HSPs) |
| |
|
| [»] scaffold0425 (1 HSPs) |
| | |
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Alignment Details
Target: chr1 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 19 - 372
Target Start/End: Complemental strand, 35140773 - 35140417
Alignment:
| Q |
19 |
attaaatcattgataagatcatgcacgatgaaatagtacttaccagcccagaatggcataattgctgatttttggaaaaacgacattgacactagatcat |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35140773 |
attaaatcattgataagatcatgcacgatgaaatagcacttaccagcccagaatggcagaattgctgatttttggaaaaacgacattgacactagatcat |
35140674 |
T |
|
| Q |
119 |
tgaagaatttattacccaattcttcttcatttttggctatttcccaaccctttagcaaaccttctgtcatccaaagcttgattaatccatccttttcaaa |
218 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
35140673 |
tgaagaatttattacccaactcttcttcatttttggctatttcccaaccctttagcaaaccttctgtcatccaaagcttgattaatccatcattttcaaa |
35140574 |
T |
|
| Q |
219 |
ctcataacccttgggaaatatagaacaataagcaaaacaatgcttcagattgtaagggaggctaaggtaactcattctcaaaaccgaataa---atgctg |
315 |
Q |
| |
|
||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||| ||||| |
|
|
| T |
35140573 |
ctcataacccttgggaaatatagaataatatgcaaaacaatgcttcagattggaagggaggctaaggtaactcattctcagaacggaataattgttgctg |
35140474 |
T |
|
| Q |
316 |
ttctcacccttgggtaaacgccacaaatcagtctccaatatcttaacccattcattt |
372 |
Q |
| |
|
| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
35140473 |
ctgtcacccttgggtaaacgccgcaaatcagtctccaatatcttaacccattcattt |
35140417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 254; Significance: 1e-141; HSPs: 29)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 21 - 372
Target Start/End: Original strand, 6258832 - 6259180
Alignment:
| Q |
21 |
taaatcattgataagatcatgcacgatgaaatagtacttaccagcccagaatggcataattgctgatttttggaaaaacgacattgacactagatcattg |
120 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||| |
|
|
| T |
6258832 |
taaatcattgataagatcatgcatgatgaaatagtacttaccagcccagaatggcataatcgctgatggttggaaaaaagacattgacactagatcattg |
6258931 |
T |
|
| Q |
121 |
aagaatttattacccaattcttcttcatttttggctatttcccaaccctttagcaaaccttctgtcatccaaagcttgattaatccatccttttcaaact |
220 |
Q |
| |
|
||||||||||||||||| |||||||| ||||||| |||| |||||||||||||||| || ||||||||||||||||||| || |||||||||||| |
|
|
| T |
6258932 |
aagaatttattacccaactcttcttcttttttggttatt------ccctttagcaaaccttttgccatccaaagcttgattaattcacccttttcaaact |
6259025 |
T |
|
| Q |
221 |
cataacccttgggaaatatagaacaataagcaaaacaatgcttcagattgtaagggaggctaaggtaactcattctcaaaaccgaataaa---tgctgtt |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||| ||||||| |
|
|
| T |
6259026 |
cataacccttgggaaatatagaacaataagcaaaacaatgcttcagattggaagggaggctaaggtaactcattctcaaagcggaataaatgttgctgtt |
6259125 |
T |
|
| Q |
318 |
ctcacccttgggtaaacgccacaaatcagtctccaatatcttaacccattcattt |
372 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6259126 |
gtcacccttgggtaaacgccacaaatcagtctccaatatcttaacccattcattt |
6259180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 21 - 372
Target Start/End: Original strand, 6244923 - 6245268
Alignment:
| Q |
21 |
taaatcattgataagatcatgcacgatgaaatagtacttaccagcccagaatggcataattgctgatttttggaaaaacgacattgacactagatcattg |
120 |
Q |
| |
|
|||||||| || ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
6244923 |
taaatcatggacaagatcatgcatgatgaaattgtacttaccagcccagaatggcataattgctgattgttggaaaaacgacattgacactagatcattg |
6245022 |
T |
|
| Q |
121 |
aagaatttattacccaattcttcttcatttttggctatttcccaaccctttagcaaaccttctgtcatccaaagcttgattaatccatccttttcaaact |
220 |
Q |
| |
|
||||||||||||||||| |||||||||| |||||||||| ||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||| |
|
|
| T |
6245023 |
aagaatttattacccaactcttcttcatctttggctatt------ccctttatcaaaccttctgccatccaaagtttgattaatccatccttttcaaact |
6245116 |
T |
|
| Q |
221 |
cataacccttgggaaatatagaacaataagcaaaacaatgcttcagattgtaagggaggctaaggtaactcattctcaaaaccgaataaatgctgttctc |
320 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| | ||| ||||||||| || | || |
|
|
| T |
6245117 |
cataacccttgggaaatatagaacaataagcaaaacaatgcttcagattggaagggaggttaaggtaactcattcttagaacggaataaatgttgctgtc |
6245216 |
T |
|
| Q |
321 |
acccttgggtaaacgccacaaatcagtctccaatatcttaacccattcattt |
372 |
Q |
| |
|
|| || ||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
6245217 |
actctcaggtaaacgccacaaatcagtctctaatatcttaacccattcattt |
6245268 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 21 - 367
Target Start/End: Complemental strand, 13270952 - 13270609
Alignment:
| Q |
21 |
taaatcattgataagatcatgcacgatgaaatagtacttaccagcccagaatggcataattgctgatttttggaaaaacgacattgacactagatcattg |
120 |
Q |
| |
|
|||||||| || ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||| |
|
|
| T |
13270952 |
taaatcatggacaagatcatgcatgatgaaatagtacttaccagcccagaatggcacaattgctgattgttggaaaaacgaaattgacactagatcattg |
13270853 |
T |
|
| Q |
121 |
aagaatttattacccaattcttcttcatttttggctatttcccaaccctttagcaaaccttctgtcatccaaagcttgattaatccatccttttcaaact |
220 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||| |
|
|
| T |
13270852 |
aagaatttattacccaactcttcttcatttttggctatt------ccctttagcaaaccttgtgccatccaaagcttgattaatccatccttttcaaact |
13270759 |
T |
|
| Q |
221 |
cataacccttgggaaatatagaacaataagcaaaacaatgcttcagattgtaagggaggctaaggtaactcattctcaaaaccgaataaatgctgt---t |
317 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||| || ||| ||||||||| | |
|
|
| T |
13270758 |
cataacccttgggaaatatagaacaatatgcaaaacaatgcttcagattggaaggtaggctaaggtaactcattctcagaatggaaaaaatgctgttgct |
13270659 |
T |
|
| Q |
318 |
ctcacccttgggtaaacgccacaaatcagtctccaatatcttaacccatt |
367 |
Q |
| |
|
||||| | || ||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
13270658 |
gtcaccttcggagaaatgccacaaatcagtctccaatatcttaacccatt |
13270609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 33 - 372
Target Start/End: Original strand, 6168533 - 6168872
Alignment:
| Q |
33 |
aagatcatgcacgatgaaatagtacttaccagcccagaatggcataattgctgatttttggaaaaacgacattgacactagatcattgaagaatttatta |
132 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||| || ||||||| |||| |
|
|
| T |
6168533 |
aagatcatgcatgatgaaatagtacttaccagcccataatggcataattgctgattgttggaaaaatgacattgacactagatgatcaaagaattcatta |
6168632 |
T |
|
| Q |
133 |
cccaattcttcttcatttttggctatttcccaaccctttagcaaaccttctgtcatccaaagcttgattaatccatccttttcaaactcataacccttgg |
232 |
Q |
| |
|
||||| ||||||||||||||| || || | |||| |||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
6168633 |
cccaactcttcttcatttttgtcttttccgcaacactttagcaaaccttgtgccatccaaagcttgattaatccatccttttcaaacttataacccttgg |
6168732 |
T |
|
| Q |
233 |
gaaatatagaacaataagcaaaacaatgcttcagattgtaagggaggctaaggtaactcattctcaaaaccgaataaatgctgttctcacccttgggtaa |
332 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||| ||| | || ||||||||||| | |||| ||| ||||| |
|
|
| T |
6168733 |
gaaatatagaacaatatgcaaaacaatgcttcagatttgaagggaggttaaggtaactctgtcttagaaaggaataaatgcttctgtcactcttaggtaa |
6168832 |
T |
|
| Q |
333 |
acgccacaaatcagtctccaatatcttaacccattcattt |
372 |
Q |
| |
|
|| ||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
6168833 |
actccacaaatcagtctctaatatcttaacccattcattt |
6168872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 21 - 298
Target Start/End: Complemental strand, 6591752 - 6591475
Alignment:
| Q |
21 |
taaatcattgataagatcatgcacgatgaaatagtacttaccagcccagaatggcataattgctgatttttggaaaaacgacattgacactagatcattg |
120 |
Q |
| |
|
||||||||||| ||||||||||| |||||| |||| ||| |||||||| ||||||||| || |||||| |||||||||||| ||||||||||||| |||| |
|
|
| T |
6591752 |
taaatcattgacaagatcatgcatgatgaagtagtgcttgccagcccataatggcatagttactgattgttggaaaaacgatattgacactagatgattg |
6591653 |
T |
|
| Q |
121 |
aagaatttattacccaattcttcttcatttttggctatttcccaaccctttagcaaaccttctgtcatccaaagcttgattaatccatccttttcaaact |
220 |
Q |
| |
|
||||||| ||| ||||| | ||||||| ||||| | ||||||||| ||||||||| ||||||| ||||||||||||||||||| || |||| ||||||| |
|
|
| T |
6591652 |
aagaattcattgcccaacttttcttcacttttgtgtctttcccaacactttagcaagccttctgccatccaaagcttgattaattcacccttctcaaact |
6591553 |
T |
|
| Q |
221 |
cataacccttgggaaatatagaacaataagcaaaacaatgcttcagattgtaagggaggctaaggtaactcattctca |
298 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||| ||||||||||| | |||||| |||||||||||| ||||| |
|
|
| T |
6591552 |
catagcccttgggaaatatagaacaataagcaaaacaacgcttcagattggatgggaggttaaggtaactcaatctca |
6591475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 33 - 365
Target Start/End: Original strand, 6899730 - 6900062
Alignment:
| Q |
33 |
aagatcatgcacgatgaaatagtacttaccagcccagaatggcataattgctgatttttggaaaaacgacattgacactagatcattgaagaatttatta |
132 |
Q |
| |
|
||||||||||| |||||| ||||| ||||||||||| ||||||||||||| ||||| |||||||| | |||||||||||||| |||||||||| |||| |
|
|
| T |
6899730 |
aagatcatgcatgatgaagtagtatttaccagcccataatggcataattgttgattgctggaaaaatgttattgacactagatcgttgaagaattcatta |
6899829 |
T |
|
| Q |
133 |
cccaattcttcttcatttttggctatttcccaaccctttagcaaaccttctgtcatccaaagcttgattaatccatccttttcaaactcataacccttgg |
232 |
Q |
| |
|
||||| ||||||||| ||||| || || | |||| ||| ||||||||||||| ||||||||||||||||| | || |||| ||||||||||| ||||| | |
|
|
| T |
6899830 |
cccaactcttcttcacttttgtctcttccgcaacacttcagcaaaccttctgccatccaaagcttgattacttcacccttctcaaactcatagccctttg |
6899929 |
T |
|
| Q |
233 |
gaaatatagaacaataagcaaaacaatgcttcagattgtaagggaggctaaggtaactcattctcaaaaccgaataaatgctgttctcacccttgggtaa |
332 |
Q |
| |
|
|||||| |||||||||| |||||||||||||||||||| |||||||| |||||||||||| | |||| | | | |||| |||| | ||||| ||||| |
|
|
| T |
6899930 |
gaaataaagaacaataatcaaaacaatgcttcagattggaagggaggttaaggtaactcaatttcaataaagggttaatgttgttattaccctctggtaa |
6900029 |
T |
|
| Q |
333 |
acgccacaaatcagtctccaatatcttaaccca |
365 |
Q |
| |
|
|||||| |||||||||||||| ||||||||||| |
|
|
| T |
6900030 |
acgccagaaatcagtctccaacatcttaaccca |
6900062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 21 - 298
Target Start/End: Original strand, 7749632 - 7749909
Alignment:
| Q |
21 |
taaatcattgataagatcatgcacgatgaaatagtacttaccagcccagaatggcataattgctgatttttggaaaaacgacattgacactagatcattg |
120 |
Q |
| |
|
||||||||||| |||||| | || |||||| ||||| ||||||||||| || |||||| || |||||| |||||||||||| ||||||||||||| |||| |
|
|
| T |
7749632 |
taaatcattgacaagatcgttcatgatgaagtagtatttaccagcccataaaggcatagttactgattgttggaaaaacgatattgacactagataattg |
7749731 |
T |
|
| Q |
121 |
aagaatttattacccaattcttcttcatttttggctatttcccaaccctttagcaaaccttctgtcatccaaagcttgattaatccatccttttcaaact |
220 |
Q |
| |
|
||||||| ||||||||| | ||||||| ||||| || || |||||| ||||||||| ||||||| |||||||||||||||||| ||| ||| ||||||| |
|
|
| T |
7749732 |
aagaattcattacccaactgttcttcagttttgtctcttccccaacactttagcaagccttctgccatccaaagcttgattaacccacgcttctcaaact |
7749831 |
T |
|
| Q |
221 |
cataacccttgggaaatatagaacaataagcaaaacaatgcttcagattgtaagggaggctaaggtaactcattctca |
298 |
Q |
| |
|
|||| ||||| ||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||| ||| ||||| |
|
|
| T |
7749832 |
catagccctttggaaatatagaacaataagcaaaacaacgcttcagattggaagggaggttaaggtaattcaatctca |
7749909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 21 - 298
Target Start/End: Original strand, 6916731 - 6917008
Alignment:
| Q |
21 |
taaatcattgataagatcatgcacgatgaaatagtacttaccagcccagaatggcataattgctgatttttggaaaaacgacattgacactagatcattg |
120 |
Q |
| |
|
||||||||||| ||||||||||| || || |||| |||||| ||||| |||||||||| ||||| ||||||||| || |||||||||||||||||| |
|
|
| T |
6916731 |
taaatcattgacaagatcatgcatgacaaagtagtgcttacctgcccatcgtggcataattactgatcgttggaaaaatgatattgacactagatcattg |
6916830 |
T |
|
| Q |
121 |
aagaatttattacccaattcttcttcatttttggctatttcccaaccctttagcaaaccttctgtcatccaaagcttgattaatccatccttttcaaact |
220 |
Q |
| |
|
|| |||| ||||||||| ||||||||| ||||| || || | |||| ||| ||||||||||||| ||||||||||||||||||| || |||| ||||||| |
|
|
| T |
6916831 |
aaaaattcattacccaactcttcttcacttttgtctcttccacaacacttcagcaaaccttctgccatccaaagcttgattaattcacccttctcaaact |
6916930 |
T |
|
| Q |
221 |
cataacccttgggaaatatagaacaataagcaaaacaatgcttcagattgtaagggaggctaaggtaactcattctca |
298 |
Q |
| |
|
|||| |||||||||||||| ||||| ||||||||||||||||||||||| ||| ||| |||||||||||||||||| |
|
|
| T |
6916931 |
catagcccttgggaaatatggaacagtaagcaaaacaatgcttcagatttgaagagagattaaggtaactcattctca |
6917008 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 21 - 369
Target Start/End: Original strand, 6141916 - 6142264
Alignment:
| Q |
21 |
taaatcattgataagatcatgcacgatgaaatagtacttaccagcccagaatggcataattgctgatttttggaaaaacgacattgacactagatcattg |
120 |
Q |
| |
|
||||||||||| ||||||||||| |||| ||||||||||||| ||| |||||||||||| |||||| ||||||||| || ||||||||||||| || | |
|
|
| T |
6141916 |
taaatcattgacaagatcatgcatagtgaagtagtacttaccagaccataatggcataattactgattgttggaaaaatgatattgacactagataatcg |
6142015 |
T |
|
| Q |
121 |
aagaatttattacccaattcttcttcatttttggctatttcccaaccctttagcaaaccttctgtcatccaaagcttgattaatccatccttttcaaact |
220 |
Q |
| |
|
||||||| |||||| || |||||| | || | | | || || | |||||||||| ||||||||||||||||||| || |||| ||||||| |
|
|
| T |
6142016 |
aagaattcattacctaactcttctatgctactgtcaactctgaaatggttcaagaaaccttctgccatccaaagcttgattaattcacccttctcaaact |
6142115 |
T |
|
| Q |
221 |
cataacccttgggaaatatagaacaataagcaaaacaatgcttcagattgtaagggaggctaaggtaactcattctcaaaaccgaataaatgctgttctc |
320 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||| |||| |||| | || |
|
|
| T |
6142116 |
catagcccttgggaaatatagaacaataagcaaaacaatgcttcagatcagaagggaggctaaggtaactgattctcagaacggaattaatgtttccgtc |
6142215 |
T |
|
| Q |
321 |
acccttgggtaaacgccacaaatcagtctccaatatcttaacccattca |
369 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
6142216 |
accctctggtaaacgccacaaatcagtctccaatatcctaacccattca |
6142264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 21 - 369
Target Start/End: Original strand, 6882134 - 6882482
Alignment:
| Q |
21 |
taaatcattgataagatcatgcacgatgaaatagtacttaccagcccagaatggcataattgctgatttttggaaaaacgacattgacactagatcattg |
120 |
Q |
| |
|
||||||||||| ||||||||||| || ||| ||||| || ||||||| |||||||||||| |||||| ||||||||| || |||||||| | || |||| |
|
|
| T |
6882134 |
taaatcattgacaagatcatgcatgacgaagtagtatttgtcagcccataatggcataattactgattgttggaaaaaagatattgacaccaaatgattg |
6882233 |
T |
|
| Q |
121 |
aagaatttattacccaattcttcttcatttttggctatttcccaaccctttagcaaaccttctgtcatccaaagcttgattaatccatccttttcaaact |
220 |
Q |
| |
|
||||||| |||||| || |||| ||| ||||| || ||| || ||| | ||||||||||| ||||||||| || |||| | || |||| |||| || |
|
|
| T |
6882234 |
aagaattcattacctaactcttgttcgcttttgtctcttttgtgacacttcaacaaaccttctgccatccaaagtttaattagttcacccttctcaagct |
6882333 |
T |
|
| Q |
221 |
cataacccttgggaaatatagaacaataagcaaaacaatgcttcagattgtaagggaggctaaggtaactcattctcaaaaccgaataaatgctgttctc |
320 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||| ||||| | | | | |||| | | || |
|
|
| T |
6882334 |
catagcccttgggaaatatagaacaataagcaaaacaacgcttcagattggaagggaggataaggtaactcaatctcagtaacaagttaatgtagatttc |
6882433 |
T |
|
| Q |
321 |
acccttgggtaaacgccacaaatcagtctccaatatcttaacccattca |
369 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| ||||| ||||||| |
|
|
| T |
6882434 |
accctcgggtaaacgccacaaatcagtctccaataccttaatccattca |
6882482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 21 - 369
Target Start/End: Original strand, 6265321 - 6265669
Alignment:
| Q |
21 |
taaatcattgataagatcatgcacgatgaaatagtacttaccagcccagaatggcataattgctgatttttggaaaaacgacattgacactagatcattg |
120 |
Q |
| |
|
||||||||||| ||||||||||| ||| || ||| ||||||| | ||| |||||||| | | |||||| ||||||||| |||||||||||||| | || | |
|
|
| T |
6265321 |
taaatcattgacaagatcatgcatgataaagtagcacttaccggtccataatggcatcaatactgattgttggaaaaatgacattgacactagttgatcg |
6265420 |
T |
|
| Q |
121 |
aagaatttattacccaattcttcttcatttttggctatttcccaaccctttagcaaaccttctgtcatccaaagcttgattaatccatccttttcaaact |
220 |
Q |
| |
|
||||||| ||| || || ||||||| ||||| | || | |||| |||| ||||||||||| |||||||||| |||||||| || ||| ||||||| |
|
|
| T |
6265421 |
aagaattcattccctaactcttctttgcttttgtttcttccgcaacaatttaacaaaccttctgccatccaaagcctgattaattcaccctcctcaaact |
6265520 |
T |
|
| Q |
221 |
cataacccttgggaaatatagaacaataagcaaaacaatgcttcagattgtaagggaggctaaggtaactcattctcaaaaccgaataaatgctgttctc |
320 |
Q |
| |
|
||||||||||||||| |||| ||| ||||||||||| ||||||||||| |||||||||||||||| ||| |||| | | ||| ||||| ||| || |
|
|
| T |
6265521 |
cataacccttgggaagattagaccaacaagcaaaacaacgcttcagattgggagggaggctaaggtaatgcatcctcagagcaaaattaatgcagttgtc |
6265620 |
T |
|
| Q |
321 |
acccttgggtaaacgccacaaatcagtctccaatatcttaacccattca |
369 |
Q |
| |
|
||||| |||||||| ||||||||||||||||||||||| |||||||||| |
|
|
| T |
6265621 |
accctcgggtaaacaccacaaatcagtctccaatatctcaacccattca |
6265669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 92 - 369
Target Start/End: Complemental strand, 6722422 - 6722145
Alignment:
| Q |
92 |
ggaaaaacgacattgacactagatcattgaagaatttattacccaattcttcttcatttttggctatttcccaaccctttagcaaaccttctgtcatcca |
191 |
Q |
| |
|
||||||| || ||||||||||||| || ||||||| ||||||||| |||| |||| ||||| || || | |||| ||| | |||| ||||||||||||| |
|
|
| T |
6722422 |
ggaaaaatgatattgacactagatgatcaaagaattcattacccaactcttgttcacttttgtctcttccgcaacacttcaacaaatcttctgtcatcca |
6722323 |
T |
|
| Q |
192 |
aagcttgattaatccatccttttcaaactcataacccttgggaaatatagaacaataagcaaaacaatgcttcagattgtaagggaggctaaggtaactc |
291 |
Q |
| |
|
|||||| |||| | || ||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| | |||||||| ||| | ||||| |
|
|
| T |
6722322 |
aagcttaattagttcactcttctcaaactcatagcccttgggaaatatagaacaataagcaaaacaacgcttcagatcggaagggaggttaaagaaactc |
6722223 |
T |
|
| Q |
292 |
attctcaaaaccgaataaatgctgttctcacccttgggtaaacgccacaaatcagtctccaatatcttaacccattca |
369 |
Q |
| |
|
| ||| | || | | |||| |||||||||||| | ||||| ||||||||||||||||||||||| | |||||||| |
|
|
| T |
6722222 |
aatcttagtacggggttaatgttgttctcaccctctgataaacaccacaaatcagtctccaatatctgatcccattca |
6722145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 91 - 299
Target Start/End: Complemental strand, 8569302 - 8569094
Alignment:
| Q |
91 |
tggaaaaacgacattgacactagatcattgaagaatttattacccaattcttcttcatttttggctatttcccaaccctttagcaaaccttctgtcatcc |
190 |
Q |
| |
|
|||||||| || || ||| | ||||||| |||||| | |||||||| ||||||||| ||||| || ||| |||| ||| | ||||||||||| ||||| |
|
|
| T |
8569302 |
tggaaaaatgaaatggactccagatcatcgaagaactcattacccagctcttcttcacttttgtctcttttgcaacacttcaacaaaccttctgccatcc |
8569203 |
T |
|
| Q |
191 |
aaagcttgattaatccatccttttcaaactcataacccttgggaaatatagaacaataagcaaaacaatgcttcagattgtaagggaggctaaggtaact |
290 |
Q |
| |
|
|||||||||| ||| |||| |||||||| ||||||||||||||||| || |||||||| ||||||||| |||| |||||| ||||||| || ||||||| |
|
|
| T |
8569202 |
aaagcttgatcaattcatctttttcaaattcataacccttgggaaaaattgaacaataggcaaaacaacgcttgagattggaagggagattatggtaact |
8569103 |
T |
|
| Q |
291 |
cattctcaa |
299 |
Q |
| |
|
|| |||||| |
|
|
| T |
8569102 |
caatctcaa |
8569094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 110 - 299
Target Start/End: Original strand, 7587566 - 7587755
Alignment:
| Q |
110 |
ctagatcattgaagaatttattacccaattcttcttcatttttggctatttcccaaccctttagcaaaccttctgtcatccaaagcttgattaatccatc |
209 |
Q |
| |
|
||||||||| ||||||| ||||||||| ||||||||| ||||| || || | |||| || ||||||||||||| ||||||||||||||| ||| |||| |
|
|
| T |
7587566 |
ctagatcatccaagaattcattacccaactcttcttcacttttgtctcttccgcaacatttcagcaaaccttctgccatccaaagcttgatcaattcatc |
7587665 |
T |
|
| Q |
210 |
cttttcaaactcataacccttgggaaatatagaacaataagcaaaacaatgcttcagattgtaagggaggctaaggtaactcattctcaa |
299 |
Q |
| |
|
|||||||| ||||||||||||||||||| |||||| | ||||||||| |||| |||||| | ||||| || ||||||||| |||||| |
|
|
| T |
7587666 |
tttttcaaatacataacccttgggaaatattgaacaaaaggcaaaacaacgctttagattggatgggagattatggtaactcaatctcaa |
7587755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 85 - 358
Target Start/End: Complemental strand, 6520525 - 6520252
Alignment:
| Q |
85 |
gatttttggaaaaacgacattgacactagatcattgaagaatttattacccaattcttcttcatttttggctatttcccaaccctttagcaaaccttctg |
184 |
Q |
| |
|
|||||||||||||| || |||||| | |||||| ||| | || |||||| || ||||||||| ||||| | | | | ||| ||| | ||||||||||| |
|
|
| T |
6520525 |
gatttttggaaaaatgaaattgactcaagatcaccgaaaatttcattaccaaaatcttcttcacttttgtccaatccgtaacacttcaacaaaccttctg |
6520426 |
T |
|
| Q |
185 |
tcatccaaagcttgattaatccatccttttcaaactcataacccttgggaaatatagaacaataagcaaaacaatgcttcagattgtaagggaggctaag |
284 |
Q |
| |
|
||||||||||||||| ||| ||| |||| ||| | ||||||||||||||| ||||||||||| ||||||||| |||| |||||| ||||||| || | |
|
|
| T |
6520425 |
ccatccaaagcttgatcaatttatcttttttaaatttataacccttgggaaaaatagaacaatatgcaaaacaacgctttagattggaagggagattatg |
6520326 |
T |
|
| Q |
285 |
gtaactcattctcaaaaccgaataaatgctgttctcacccttgggtaaacgccacaaatcagtctccaatatct |
358 |
Q |
| |
|
|||||||| |||||| || || | |||| ||| || | | | ||||||||||| ||||||||||||||||| |
|
|
| T |
6520325 |
gtaactcaatctcaatactgagttaatggtgtggtctctgtctgataaacgccacatatcagtctccaatatct |
6520252 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 112 - 299
Target Start/End: Original strand, 8471257 - 8471444
Alignment:
| Q |
112 |
agatcattgaagaatttattacccaattcttcttcatttttggctatttcccaaccctttagcaaaccttctgtcatccaaagcttgattaatccatcct |
211 |
Q |
| |
|
||||||| ||||||| ||||||||| ||||| ||| ||||| || || |||| || ||||||||||||| ||||||||||||||| ||| ||||| |
|
|
| T |
8471257 |
agatcatcaaagaattcattacccaactcttcctcacttttgtctcttctgcaacatttcagcaaaccttctgccatccaaagcttgatcaattcatccc |
8471356 |
T |
|
| Q |
212 |
tttcaaactcataacccttgggaaatatagaacaataagcaaaacaatgcttcagattgtaagggaggctaaggtaactcattctcaa |
299 |
Q |
| |
|
| ||||||||| ||||||| ||||||||||| || || |||||||| |||||||||| |||||||| || ||||||||| |||||| |
|
|
| T |
8471357 |
tgtcaaactcaaaacccttaggaaatatagagcagtaggcaaaacagcgcttcagattagaagggaggttatggtaactcaatctcaa |
8471444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 84 - 275
Target Start/End: Original strand, 6946934 - 6947125
Alignment:
| Q |
84 |
tgatttttggaaaaacgacattgacactagatcattgaagaatttattacccaattcttcttcatttttggctatttcccaaccctttagcaaaccttct |
183 |
Q |
| |
|
|||| ||||||||||||| |||||| | |||||| |||| | || |||||| || ||||||||| ||||| || || |||| ||| | |||||||||| |
|
|
| T |
6946934 |
tgatatttggaaaaacgaaattgactcaagatcactgaaaatttcattacctaactcttcttcacttttgtctcttctgcaacacttcaacaaaccttct |
6947033 |
T |
|
| Q |
184 |
gtcatccaaagcttgattaatccatccttttcaaactcataacccttgggaaatatagaacaataagcaaaacaatgcttcagattgtaagg |
275 |
Q |
| |
|
| ||||||||||||||| ||| |||| |||||||| ||||||||||||||| || || ||||| ||||||||| ||||| ||||| |||| |
|
|
| T |
6947034 |
gccatccaaagcttgatcaattcatctttttcaaatgtataacccttgggaaaaatggagcaataggcaaaacaacgcttccgattggaagg |
6947125 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 175 - 370
Target Start/End: Original strand, 8589485 - 8589680
Alignment:
| Q |
175 |
aaaccttctgtcatccaaagcttgattaatccatccttttcaaactcataacccttgggaaatatagaacaataagcaaaacaatgcttcagattgtaag |
274 |
Q |
| |
|
|||||||||| |||||| |||||||| ||| || | |||||||| ||||||||||||||||| || |||||||||| ||| |||||||| ||| || ||| |
|
|
| T |
8589485 |
aaaccttctgccatccagagcttgatcaattcacctttttcaaattcataacccttgggaaaaatggaacaataagaaaagcaatgctttagaatggaag |
8589584 |
T |
|
| Q |
275 |
ggaggctaaggtaactcattctcaaaaccgaataaatgctgttctcacccttgggtaaacgccacaaatcagtctccaatatcttaacccattcat |
370 |
Q |
| |
|
|||| || ||||||| | ||||| ||| || | ||||||| || || | | ||||||||||| || ||||||||||||||||| ||| |||| |
|
|
| T |
8589585 |
ggagattatggtaacttaatctcagaactgagtttatgctgtgttccccatctgataaacgccacatattagtctccaatatcttaatccactcat |
8589680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 369
Target Start/End: Original strand, 5298436 - 5298684
Alignment:
| Q |
121 |
aagaatttattacccaattcttcttcatttttggctatttcccaaccctttagcaaaccttctgtcatccaaagcttgattaatccatccttttcaaact |
220 |
Q |
| |
|
||||||| ||||||||| ||||||||| |||| | ||| || | ||| | ||||||||||| ||||||||||||||||||| || |||| ||| |
|
|
| T |
5298436 |
aagaattcattacccaactcttcttcagttttatcaattctgcagcacttcaacaaaccttctgccatccaaagcttgattaattcagccttgcaaaaaa |
5298535 |
T |
|
| Q |
221 |
cataacccttgggaaatatagaacaataagcaaaacaatgcttcagattgtaagggaggctaaggtaactcattctcaaaaccgaataaatgctgttctc |
320 |
Q |
| |
|
|||||| | |||||||| |||||||||| ||||||| |||||||||| ||||||| | || |||||| |||||||| || | |||| | |||| |
|
|
| T |
5298536 |
tataacctcttggaaatatggaacaataagaaaaacaacgcttcagatttgaagggagatgatggaaactcaacctcaaaactgagttaatgttactctc |
5298635 |
T |
|
| Q |
321 |
acccttgggtaaacgccacaaatcagtctccaatatcttaacccattca |
369 |
Q |
| |
|
||||| | ||||| ||||| ||| |||||||||||||||||||||||| |
|
|
| T |
5298636 |
accctctgataaacaccacagatctgtctccaatatcttaacccattca |
5298684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 123 - 305
Target Start/End: Complemental strand, 6839229 - 6839047
Alignment:
| Q |
123 |
gaatttattacccaattcttcttcatttttggctatttcccaaccctttagcaaaccttctgtcatccaaagcttgattaatccatccttttcaaactca |
222 |
Q |
| |
|
||||| ||| ||||||||||||||| ||||| || || | || || ||||||||||||| ||||||||||||||| ||| ||||| | ||||||||| |
|
|
| T |
6839229 |
gaattcatttcccaattcttcttcacttttgtctcttccgcagtatttcagcaaaccttctgccatccaaagcttgatcaattcatccctgtcaaactca |
6839130 |
T |
|
| Q |
223 |
taacccttgggaaatatagaacaataagcaaaacaatgcttcagattgtaagggaggctaaggtaactcattctcaaaaccga |
305 |
Q |
| |
|
||||| | ||||||| |||||| || |||||||| | |||| | || |||||||| || ||||||||| ||||||| |||| |
|
|
| T |
6839129 |
aaacccctaggaaatacagaacagtaggcaaaacagcgtttcaaactggaagggaggttatggtaactcaatctcaaagccga |
6839047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 370
Target Start/End: Original strand, 5267731 - 5268010
Alignment:
| Q |
91 |
tggaaaaacgacattgacactagatcattgaagaatttattacccaattcttcttcatttttggctatttcccaaccctttagcaaaccttctgtcatcc |
190 |
Q |
| |
|
|||||||| || |||||||||||||||| || |||| |||||||| |||||||| |||| || || | | | ||| |||||||| || | ||||| |
|
|
| T |
5267731 |
tggaaaaatgaaattgacactagatcatctaataattgattacccagctcttcttcgcttttttctgttccgcggcacttcagcaaaccgtcggccatcc |
5267830 |
T |
|
| Q |
191 |
aaagcttgattaatccatccttttcaaactcataacccttgggaaatatagaacaataagcaaaacaatgcttcagattgtaagggaggctaaggtaact |
290 |
Q |
| |
|
|||| ||||||||| || | || |||||| | || |||||||||| |||||||||| |||||| ||||||||||| ||||||| | ||||||| |
|
|
| T |
5267831 |
aaagtttgattaattcacctttgtcaaaccacttgcctttgggaaataaggaacaataagaaaaacagcgcttcagattggaagggagatgatggtaact |
5267930 |
T |
|
| Q |
291 |
cattctcaaaaccgaataaatgctgttctcacccttgggtaaacgccacaaatcagtctccaatatcttaacccattcat |
370 |
Q |
| |
|
|| ||||| || |||| |||| | | ||||| | | ||||||||||| ||| ||||||||||||||||||||||||| |
|
|
| T |
5267931 |
caatctcagtactgaattaatgttaatgtcaccttctgataaacgccacatatctgtctccaatatcttaacccattcat |
5268010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 370
Target Start/End: Complemental strand, 6554795 - 6554516
Alignment:
| Q |
91 |
tggaaaaacgacattgacactagatcattgaagaatttattacccaattcttcttcatttttggctatttcccaaccctttagcaaaccttctgtcatcc |
190 |
Q |
| |
|
|||||||| || |||||| | |||||| ||| | || |||||| || ||||||||| ||||| || | | |||| ||| ||||||||||||| ||||| |
|
|
| T |
6554795 |
tggaaaaatgaaattgactcaagatcaccgaaaatttcattaccaaactcttcttcacttttgtctgatccgcaacacttcagcaaaccttctgccatcc |
6554696 |
T |
|
| Q |
191 |
aaagcttgattaatccatccttttcaaactcataacccttgggaaatatagaacaataagcaaaacaatgcttcagattgtaagggaggctaaggtaact |
290 |
Q |
| |
|
|||||||||| ||| | || |||||||| ||| |||||||| || || |||||||| ||||| ||| |||| |||| ||||||| || ||||||| |
|
|
| T |
6554695 |
aaagcttgatcaatacttctttttcaaatctatagcccttggggaaaatggaacaatacgcaaagcaacgctttagatccgaagggagattatggtaact |
6554596 |
T |
|
| Q |
291 |
cattctcaaaaccgaataaatgctgttctcacccttgggtaaacgccacaaatcagtctccaatatcttaacccattcat |
370 |
Q |
| |
|
|| ||| | || || | |||| ||| || || | | ||||||||||| |||||||||||||||||||| |||||||| |
|
|
| T |
6554595 |
caatcttagtactgagttaatgttgtggtccccatctgataaacgccacatatcagtctccaatatcttaatccattcat |
6554516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 370
Target Start/End: Original strand, 6735655 - 6735941
Alignment:
| Q |
84 |
tgatttttggaaaaacgacattgacactagatcattgaagaatttattacccaattcttcttcatttttggctatttcccaaccctttagcaaaccttct |
183 |
Q |
| |
|
||||| ||||||||| || |||||| | |||||| ||| | || ||| || || ||||||||| ||||| || | | |||| ||| |||||||||||| |
|
|
| T |
6735655 |
tgattgttggaaaaatgaaattgactcaagatcaccgaaaatttcattgccaaactcttcttcacttttgtctgatccgcaacacttcagcaaaccttct |
6735754 |
T |
|
| Q |
184 |
gtcatccaaagcttgattaatccatccttttcaaactcataacccttgggaaatatagaacaataagcaaaacaatgcttcagattgtaagggaggctaa |
283 |
Q |
| |
|
| ||||||||||||||| ||| | || |||| ||| |||||||||||| || || |||||||| ||||| ||| |||| |||| | ||||| || |
|
|
| T |
6735755 |
gccatccaaagcttgatcaatacttcttttttaaatctataacccttggggaaaatggaacaataggcaaagcaacgctttagatctgatgggagattat |
6735854 |
T |
|
| Q |
284 |
ggtaactcattctcaaaaccgaataaatgctgttctcacccttgggtaaacgccacaaatcagtctccaatatcttaacccattcat |
370 |
Q |
| |
|
||||||||| ||| | || || | |||| ||| || || | | ||||||||||| |||||||||||||||||||| |||||||| |
|
|
| T |
6735855 |
ggtaactcaatcttagtactgagttaatgttgtggtccccatctgataaacgccacatatcagtctccaatatcttaatccattcat |
6735941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 369
Target Start/End: Complemental strand, 4389304 - 4389019
Alignment:
| Q |
84 |
tgatttttggaaaaacgacattgacactagatcattgaagaatttattacccaattcttcttcatttttggctatttcccaaccctttagcaaaccttct |
183 |
Q |
| |
|
|||||| |||||||| || ||||| |||||||| || || | ||||||||| ||||||||| ||||| | || | |||| ||| | |||||| || |
|
|
| T |
4389304 |
tgatttctggaaaaatgaaattgattctagatcaacaaataactcattacccaactcttcttcacttttgtcacttccgcaacacttcaacaaaccatcc |
4389205 |
T |
|
| Q |
184 |
gtcatccaaagcttgattaatccatccttttcaaactcataacccttgggaaatatagaacaataagcaaaacaatgcttcagattgtaagggaggctaa |
283 |
Q |
| |
|
| |||||||||||||||||| || ||| ||||| | ||| ||||||||||| |||||||||| ||||||| | || ||| || ||||||| | |
|
|
| T |
4389204 |
gctatccaaagcttgattaattcacgcttgtcaaaaatgtgacctttgggaaatatggaacaataagaaaaacaacgtttaagaatggaagggagatgat |
4389105 |
T |
|
| Q |
284 |
ggtaactcattctcaaaaccgaataaatgctgttctcacccttgggtaaacgccacaaatcagtctccaatatcttaacccattca |
369 |
Q |
| |
|
||||||||| ||||| || |||| |||| | || ||||| | | |||| |||||| ||| |||||||||||| ||||||||||| |
|
|
| T |
4389104 |
ggtaactcaatctcagtactgaattaatgttattgtcaccttctgataaatgccacatatcggtctccaatatcctaacccattca |
4389019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 370
Target Start/End: Original strand, 8454409 - 8454605
Alignment:
| Q |
174 |
caaaccttctgtcatccaaagcttgattaatccatccttttcaaactcataacccttgggaaatatagaacaataagcaaaacaatgcttcagattgtaa |
273 |
Q |
| |
|
||||||||||| |||||||||| |||| | | |||| |||| ||| | || |||||||||||| || |||||||| | ||| ||| |||| ||||| || |
|
|
| T |
8454409 |
caaaccttctgccatccaaagcatgatcagttcatcttttttaaatttatgacccttgggaaaaatggaacaataggaaaagcaacgctttagattagaa |
8454508 |
T |
|
| Q |
274 |
gggaggctaaggtaactcattctcaaaaccgaataaatgctgttctcacccttgggtaaacgccacaaatcagtctccaatatcttaacccattcat |
370 |
Q |
| |
|
||||| || ||||||||| ||||| || || | || | ||| || | || | ||||||||||| ||||||||||||||| |||| |||||||| |
|
|
| T |
8454509 |
gggagattatggtaactcaatctcagtactgagttaacgttgtgatctacttttgataaacgccacatatcagtctccaatatattaatccattcat |
8454605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 365
Target Start/End: Original strand, 5249976 - 5250118
Alignment:
| Q |
223 |
taacccttgggaaatatagaacaataagcaaaacaatgcttcagattgtaagggaggctaaggtaactcattctcaaaaccgaataaatgctgttctcac |
322 |
Q |
| |
|
||||| || |||||||| |||||||||| ||| ||| |||| ||| | ||||||| | | ||||||||| ||||| || |||| |||| | |||| | |
|
|
| T |
5249976 |
taacctttaggaaatatggaacaataagaaaagcaacgcttaagaatagaagggagacaatggtaactcaatctcagtactgaattaatgttactctcgc |
5250075 |
T |
|
| Q |
323 |
ccttgggtaaacgccacaaatcagtctccaatatcttaaccca |
365 |
Q |
| |
|
||| | ||||||||||| ||| |||||||||||||||||||| |
|
|
| T |
5250076 |
cctctgataaacgccacatatctgtctccaatatcttaaccca |
5250118 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 298
Target Start/End: Complemental strand, 6449151 - 6448937
Alignment:
| Q |
84 |
tgatttttggaaaaacgacattgacactagatcattgaagaatttattacccaattcttcttcatttttggctatttcccaaccctttagcaaaccttct |
183 |
Q |
| |
|
||||| ||||||||| || |||||| | |||||| ||| | || |||||| || ||||||||| ||||| || | | |||| ||| | || ||||||| |
|
|
| T |
6449151 |
tgattgttggaaaaatgaaattgactcaagatcacagaaaatttcattaccaaactcttcttcacttttgtctgatccgcaacacttcaacataccttct |
6449052 |
T |
|
| Q |
184 |
gtcatccaaagcttgattaatccatccttttcaaactcataacccttgggaaatatagaacaataagcaaaacaatgcttcagattgtaagggaggctaa |
283 |
Q |
| |
|
| ||||||||||||||| ||| ||||||||| ||| ||||||||| || || || || ||||| ||||| ||| ||| ||| || ||||||| || |
|
|
| T |
6449051 |
gccatccaaagcttgatcaattcatcctttttaaatctataacccttagggaaaatggagcaataggcaaagcaacactttagactggaagggagattat |
6448952 |
T |
|
| Q |
284 |
ggtaactcattctca |
298 |
Q |
| |
|
||||||||| ||||| |
|
|
| T |
6448951 |
ggtaactcaatctca |
6448937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 370
Target Start/End: Complemental strand, 6480346 - 6480060
Alignment:
| Q |
84 |
tgatttttggaaaaacgacattgacactagatcattgaagaatttattacccaattcttcttcatttttggctatttcccaaccctttagcaaaccttct |
183 |
Q |
| |
|
||||| ||||||||| || |||||| | |||||| ||| | || |||||| || ||||||||| ||||| | | | |||| ||| | |||||||||| |
|
|
| T |
6480346 |
tgattgttggaaaaatgaaattgactcaagatcaccgaaaatttcattaccaaactcttcttcacttttgtatgatccgcaacacttcaacaaaccttct |
6480247 |
T |
|
| Q |
184 |
gtcatccaaagcttgattaatccatccttttcaaactcataacccttgggaaatatagaacaataagcaaaacaatgcttcagattgtaagggaggctaa |
283 |
Q |
| |
|
| ||||||||||||||| ||| |||| |||||||| |||||||||||| || || ||||| | ||||| ||| |||| ||| | ||||||| | |
|
|
| T |
6480246 |
gccatccaaagcttgatcaattcatctttttcaaatgtataacccttggggaaaatggaacagaaggcaaagcaacgcttttgatcggaagggagattgt |
6480147 |
T |
|
| Q |
284 |
ggtaactcattctcaaaaccgaataaatgctgttctcacccttgggtaaacgccacaaatcagtctccaatatcttaacccattcat |
370 |
Q |
| |
|
||||||||| ||||| || | || ||| |||| || | | | ||||||||||| |||||||||||||||||| | |||||||| |
|
|
| T |
6480146 |
ggtaactcaatctcagcactggattaattttgttgtccacgtctgataaacgccacatatcagtctccaatatcttcatccattcat |
6480060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 330 - 370
Target Start/End: Complemental strand, 6448905 - 6448865
Alignment:
| Q |
330 |
taaacgccacaaatcagtctccaatatcttaacccattcat |
370 |
Q |
| |
|
||||||||||| |||||||||||||||||| | |||||||| |
|
|
| T |
6448905 |
taaacgccacatatcagtctccaatatcttcatccattcat |
6448865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 83 - 305
Target Start/End: Complemental strand, 6573660 - 6573438
Alignment:
| Q |
83 |
ctgatttttggaaaaacgacattgacactagatcattgaagaatttattacccaattcttcttcatttttggctatttcccaaccctttagcaaaccttc |
182 |
Q |
| |
|
|||||| ||||||||| || || ||| ||||||||| ||||||| ||||||||| |||| |||| ||||| || || | |||| || ||||||||||| |
|
|
| T |
6573660 |
ctgattgttggaaaaatgaaatggactctagatcatccaagaattcattacccaactcttgttcacttttgtctcttccgcaacatttcagcaaaccttc |
6573561 |
T |
|
| Q |
183 |
tgtcatccaaagcttgattaatccatccttttcaaactcataacccttgggaaatatagaacaataagcaaaacaatgcttcagattgtaagggaggcta |
282 |
Q |
| |
|
| ||||||||| ||||| ||| |||| |||||||| | |||||||||||||||||| |||||||| ||||||||| |||| |||||| ||||||| || |
|
|
| T |
6573560 |
agccatccaaaggttgatcaattcatctttttcaaatttataacccttgggaaatatggaacaatatgcaaaacaacgctttagattggaagggagatta |
6573461 |
T |
|
| Q |
283 |
aggtaactcattctcaaaaccga |
305 |
Q |
| |
|
| ||||||| |||||| ||||| |
|
|
| T |
6573460 |
tgataactcaatctcaataccga |
6573438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0425 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0425
Description:
Target: scaffold0425; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 370
Target Start/End: Complemental strand, 7841 - 7555
Alignment:
| Q |
84 |
tgatttttggaaaaacgacattgacactagatcattgaagaatttattacccaattcttcttcatttttggctatttcccaaccctttagcaaaccttct |
183 |
Q |
| |
|
||||| ||||||||| || |||||| | |||||| ||| | || ||| || || ||||||||| ||||| || | | |||| ||| |||||||||||| |
|
|
| T |
7841 |
tgattgttggaaaaatgaaattgactcaagatcaccgaaaatttcattgccaaactcttcttcacttttgtctgatccgcaacacttcagcaaaccttct |
7742 |
T |
|
| Q |
184 |
gtcatccaaagcttgattaatccatccttttcaaactcataacccttgggaaatatagaacaataagcaaaacaatgcttcagattgtaagggaggctaa |
283 |
Q |
| |
|
||||||||||||||| ||| | || |||||||| ||| ||||||||||| || |||||||| | ||| ||| || | |||| ||||||| || |
|
|
| T |
7741 |
cccatccaaagcttgatcaatacttctttttcaaatctatagcccttgggaaaaatggaacaataggaaaagcaacgccttagatcagaagggagattat |
7642 |
T |
|
| Q |
284 |
ggtaactcattctcaaaaccgaataaatgctgttctcacccttgggtaaacgccacaaatcagtctccaatatcttaacccattcat |
370 |
Q |
| |
|
||||||||| ||||| || || | |||| ||| || || | | ||||||||||| || |||||||||||||||| |||||||| |
|
|
| T |
7641 |
ggtaactcaatctcagtactgagttaatggtgtgatccccgtctgataaacgccacatgtcggtctccaatatcttaatccattcat |
7555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 292
Target Start/End: Complemental strand, 25242394 - 25242289
Alignment:
| Q |
187 |
atccaaagcttgattaatccatccttttcaaactcataacccttgggaaatatagaacaataagcaaaacaatgcttcagattgtaagggaggctaaggt |
286 |
Q |
| |
|
|||||||||||||||||| || |||| ||| ||||||| || |||||||| ||||| ||| ||||||| ||||||||||| ||||||| || ||| |
|
|
| T |
25242394 |
atccaaagcttgattaattcacccttgcaaaaagcataacctttaggaaatatggaacagtaactaaaacaacgcttcagattggaagggagattatggt |
25242295 |
T |
|
| Q |
287 |
aactca |
292 |
Q |
| |
|
|||||| |
|
|
| T |
25242294 |
aactca |
25242289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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