View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7387_low_1 (Length: 569)

Name: NF7387_low_1
Description: NF7387
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7387_low_1
NF7387_low_1
[»] chr5 (46 HSPs)
chr5 (25-551)||(27705225-27705754)
chr5 (25-241)||(22047723-22047940)
chr5 (25-241)||(325096-325310)
chr5 (25-236)||(30859080-30859292)
chr5 (25-232)||(39603853-39604061)
chr5 (108-231)||(39605461-39605584)
chr5 (25-203)||(30910770-30910949)
chr5 (46-234)||(30857798-30857984)
chr5 (25-209)||(22308709-22308892)
chr5 (36-203)||(30912084-30912249)
chr5 (25-203)||(8521284-8521459)
chr5 (121-209)||(22049141-22049229)
chr5 (25-203)||(1010276-1010451)
chr5 (46-146)||(15548323-15548424)
chr5 (25-96)||(1102753-1102824)
chr5 (25-203)||(33173869-33174047)
chr5 (236-291)||(34445072-34445127)
chr5 (25-96)||(9220367-9220441)
chr5 (235-287)||(11494925-11494977)
chr5 (173-233)||(41798004-41798064)
chr5 (58-203)||(8523688-8523833)
chr5 (25-92)||(11262532-11262599)
chr5 (235-303)||(7119215-7119282)
chr5 (235-287)||(11502028-11502080)
chr5 (235-287)||(11509424-11509476)
chr5 (235-287)||(11516797-11516849)
chr5 (235-287)||(11524199-11524251)
chr5 (235-287)||(11531610-11531662)
chr5 (235-287)||(11562562-11562614)
chr5 (46-96)||(324174-324224)
chr5 (125-235)||(15941271-15941380)
chr5 (121-203)||(22307537-22307619)
chr5 (78-218)||(32757839-32757978)
chr5 (235-288)||(321929-321982)
chr5 (46-91)||(1009325-1009370)
chr5 (35-96)||(35081357-35081418)
chr5 (164-232)||(11262256-11262324)
chr5 (235-270)||(14023352-14023387)
chr5 (121-196)||(24503220-24503295)
chr5 (121-196)||(24509041-24509116)
chr5 (121-235)||(34894146-34894260)
chr5 (28-93)||(10735901-10735966)
chr5 (25-70)||(20539256-20539301)
chr5 (235-287)||(11539080-11539132)
chr5 (236-284)||(23251766-23251814)
chr5 (128-196)||(34898963-34899031)
[»] chr8 (60 HSPs)
chr8 (25-234)||(45281098-45281306)
chr8 (25-235)||(32798441-32798651)
chr8 (25-236)||(44076271-44076483)
chr8 (25-235)||(32695183-32695394)
chr8 (25-234)||(4810467-4810672)
chr8 (25-234)||(32693828-32694035)
chr8 (25-234)||(42870811-42871021)
chr8 (25-240)||(30786668-30786883)
chr8 (121-235)||(26696529-26696643)
chr8 (41-235)||(42872116-42872308)
chr8 (25-203)||(13117542-13117720)
chr8 (30-203)||(42100022-42100193)
chr8 (25-203)||(42098592-42098770)
chr8 (25-213)||(22551026-22551212)
chr8 (25-209)||(6397806-6397988)
chr8 (30-209)||(41629731-41629908)
chr8 (125-234)||(32797136-32797245)
chr8 (25-196)||(8571526-8571697)
chr8 (105-235)||(28418803-28418934)
chr8 (61-203)||(13116359-13116499)
chr8 (105-236)||(28420162-28420294)
chr8 (121-234)||(8570116-8570229)
chr8 (105-234)||(30787589-30787718)
chr8 (25-203)||(42877648-42877823)
chr8 (121-209)||(211618-211706)
chr8 (121-209)||(240550-240638)
chr8 (121-209)||(725241-725329)
chr8 (121-209)||(793905-793993)
chr8 (30-209)||(45279703-45279880)
chr8 (25-96)||(24192573-24192644)
chr8 (122-203)||(17338070-17338151)
chr8 (83-235)||(41630091-41630243)
chr8 (105-196)||(6398486-6398577)
chr8 (25-96)||(9854789-9854860)
chr8 (29-96)||(10669359-10669426)
chr8 (25-96)||(14840809-14840880)
chr8 (105-196)||(17339538-17339629)
chr8 (136-234)||(13197961-13198059)
chr8 (35-97)||(42362671-42362732)
chr8 (122-234)||(212718-212830)
chr8 (122-234)||(239424-239536)
chr8 (122-234)||(726341-726453)
chr8 (122-234)||(792779-792891)
chr8 (122-234)||(798842-798954)
chr8 (120-192)||(29103527-29103599)
chr8 (25-199)||(38696341-38696514)
chr8 (25-96)||(20180584-20180655)
chr8 (235-297)||(6344091-6344153)
chr8 (235-296)||(24476615-24476676)
chr8 (186-234)||(12850465-12850513)
chr8 (26-93)||(17455185-17455252)
chr8 (122-201)||(29104371-29104450)
chr8 (46-131)||(42878761-42878846)
chr8 (235-297)||(17707919-17707980)
chr8 (121-203)||(45437487-45437569)
chr8 (149-234)||(17702308-17702393)
chr8 (250-302)||(9840104-9840156)
chr8 (235-287)||(16338648-16338700)
chr8 (122-218)||(38697012-38697108)
chr8 (25-93)||(43202234-43202302)
[»] chr3 (56 HSPs)
chr3 (25-235)||(38242425-38242635)
chr3 (35-235)||(40244184-40244381)
chr3 (105-235)||(18197144-18197274)
chr3 (27-234)||(34818084-34818289)
chr3 (25-196)||(3208520-3208691)
chr3 (25-197)||(10732038-10732210)
chr3 (25-234)||(12107889-12108101)
chr3 (30-235)||(38240903-38241105)
chr3 (78-241)||(53624325-53624486)
chr3 (65-194)||(53622700-53622830)
chr3 (27-197)||(53614184-53614354)
chr3 (24-233)||(34819193-34819401)
chr3 (25-209)||(42684899-42685082)
chr3 (35-203)||(27837949-27838114)
chr3 (105-235)||(50810822-50810953)
chr3 (105-235)||(50864911-50865042)
chr3 (120-235)||(53194874-53194989)
chr3 (35-197)||(10730920-10731080)
chr3 (124-237)||(37736089-37736202)
chr3 (35-231)||(40745387-40745581)
chr3 (25-196)||(26886308-26886479)
chr3 (122-218)||(50809435-50809531)
chr3 (122-218)||(50866331-50866427)
chr3 (121-237)||(53421766-53421882)
chr3 (122-209)||(18458663-18458750)
chr3 (120-231)||(41544663-41544774)
chr3 (25-196)||(53420352-53420523)
chr3 (121-235)||(40364316-40364430)
chr3 (25-203)||(41264562-41264740)
chr3 (30-203)||(35372075-35372245)
chr3 (25-189)||(27841619-27841783)
chr3 (35-203)||(35370942-35371104)
chr3 (171-235)||(12105287-12105351)
chr3 (46-203)||(3455555-3455712)
chr3 (122-236)||(36176512-36176627)
chr3 (166-235)||(3209981-3210050)
chr3 (122-235)||(37735303-37735416)
chr3 (105-197)||(53612906-53612998)
chr3 (121-236)||(53187555-53187669)
chr3 (78-209)||(18442275-18442401)
chr3 (78-209)||(19487349-19487475)
chr3 (235-315)||(34073094-34073174)
chr3 (30-178)||(36175317-36175463)
chr3 (25-93)||(10301072-10301140)
chr3 (25-89)||(14745110-14745174)
chr3 (30-96)||(48083362-48083428)
chr3 (122-231)||(23443463-23443572)
chr3 (235-296)||(36961152-36961212)
chr3 (25-97)||(10338872-10338944)
chr3 (30-203)||(24403268-24403440)
chr3 (25-96)||(3209877-3209948)
chr3 (235-270)||(49559432-49559467)
chr3 (49-114)||(11224776-11224839)
chr3 (31-198)||(28909523-28909687)
chr3 (47-96)||(7270458-7270507)
chr3 (123-191)||(44182323-44182391)
[»] chr4 (74 HSPs)
chr4 (25-234)||(52239875-52240084)
chr4 (25-234)||(1794409-1794619)
chr4 (30-235)||(11968508-11968713)
chr4 (25-237)||(2312390-2312603)
chr4 (25-231)||(27850847-27851047)
chr4 (58-230)||(6349494-6349667)
chr4 (25-235)||(6348152-6348360)
chr4 (25-203)||(7707617-7707796)
chr4 (25-236)||(15449984-15450195)
chr4 (105-235)||(2310920-2311050)
chr4 (27-232)||(42810115-42810319)
chr4 (108-235)||(4128990-4129117)
chr4 (35-235)||(40792748-40792944)
chr4 (46-234)||(393569-393756)
chr4 (122-235)||(37882831-37882944)
chr4 (107-234)||(1188841-1188968)
chr4 (123-235)||(24426336-24426448)
chr4 (107-234)||(44503670-44503796)
chr4 (37-233)||(1829752-1829947)
chr4 (58-209)||(52963592-52963741)
chr4 (105-234)||(390215-390344)
chr4 (104-241)||(42871086-42871223)
chr4 (25-235)||(1587179-1587388)
chr4 (105-234)||(37884266-37884395)
chr4 (121-236)||(1831268-1831383)
chr4 (78-203)||(10168745-10168870)
chr4 (73-235)||(1588045-1588208)
chr4 (25-203)||(23201875-23202053)
chr4 (25-203)||(53432091-53432268)
chr4 (105-232)||(27847678-27847805)
chr4 (35-203)||(52241077-52241242)
chr4 (122-234)||(44501516-44501628)
chr4 (122-209)||(54485551-54485638)
chr4 (125-231)||(42872308-42872414)
chr4 (120-234)||(53205487-53205601)
chr4 (121-234)||(1190197-1190310)
chr4 (121-206)||(50548228-50548313)
chr4 (121-196)||(31968397-31968472)
chr4 (25-96)||(56085482-56085553)
chr4 (36-197)||(7708710-7708869)
chr4 (25-203)||(13165525-13165701)
chr4 (25-203)||(53435663-53435840)
chr4 (46-196)||(40723264-40723412)
chr4 (25-96)||(44498596-44498667)
chr4 (121-203)||(10167454-10167536)
chr4 (121-203)||(31965864-31965946)
chr4 (122-196)||(33232703-33232777)
chr4 (235-297)||(52440575-52440637)
chr4 (105-205)||(54484340-54484441)
chr4 (25-199)||(11438478-11438651)
chr4 (122-235)||(49344015-49344129)
chr4 (30-96)||(4871629-4871695)
chr4 (121-234)||(4871369-4871482)
chr4 (235-314)||(42158861-42158938)
chr4 (123-235)||(49342616-49342728)
chr4 (121-197)||(53204396-53204472)
chr4 (25-96)||(4714155-4714226)
chr4 (25-156)||(13166679-13166809)
chr4 (30-196)||(23203869-23204033)
chr4 (122-197)||(54865140-54865214)
chr4 (30-96)||(2311088-2311154)
chr4 (25-87)||(7053321-7053383)
chr4 (121-203)||(50546935-50547017)
chr4 (255-304)||(41038829-41038878)
chr4 (25-96)||(8682758-8682829)
chr4 (25-93)||(52138703-52138771)
chr4 (25-96)||(19750204-19750275)
chr4 (25-96)||(19789531-19789602)
chr4 (29-96)||(22069370-22069437)
chr4 (25-96)||(26496219-26496290)
chr4 (25-92)||(49896494-49896561)
chr4 (258-315)||(21709725-21709782)
chr4 (149-205)||(669678-669733)
chr4 (238-270)||(26709590-26709622)
[»] chr2 (39 HSPs)
chr2 (25-234)||(11317277-11317486)
chr2 (25-235)||(6030379-6030589)
chr2 (30-236)||(43033078-43033282)
chr2 (25-236)||(32469144-32469356)
chr2 (25-236)||(42641770-42641980)
chr2 (78-235)||(28562773-28562928)
chr2 (46-238)||(11315927-11316117)
chr2 (25-203)||(29219414-29219593)
chr2 (25-203)||(29332713-29332892)
chr2 (25-234)||(17459251-17459461)
chr2 (46-234)||(17460616-17460802)
chr2 (82-241)||(7437727-7437886)
chr2 (25-234)||(11547657-11547866)
chr2 (25-203)||(18616914-18617093)
chr2 (46-231)||(43034401-43034586)
chr2 (30-234)||(32470491-32470693)
chr2 (25-203)||(1085297-1085473)
chr2 (123-232)||(28561368-28561477)
chr2 (111-230)||(7436469-7436587)
chr2 (31-198)||(34512848-34513012)
chr2 (25-198)||(34464002-34464174)
chr2 (25-96)||(34467641-34467712)
chr2 (25-96)||(34513463-34513534)
chr2 (78-218)||(2277432-2277571)
chr2 (122-203)||(34468987-34469068)
chr2 (25-93)||(8320895-8320963)
chr2 (104-196)||(18615552-18615644)
chr2 (104-196)||(29220864-29220956)
chr2 (104-196)||(29334163-29334255)
chr2 (25-96)||(4920968-4921039)
chr2 (235-297)||(28172982-28173044)
chr2 (121-209)||(12359684-12359772)
chr2 (123-203)||(44192453-44192533)
chr2 (128-231)||(36010578-36010681)
chr2 (235-296)||(33613695-33613757)
chr2 (78-218)||(34147150-34147289)
chr2 (30-161)||(6028787-6028917)
chr2 (122-195)||(36011648-36011721)
chr2 (235-271)||(38768813-38768849)
[»] scaffold0077 (2 HSPs)
scaffold0077 (25-240)||(54093-54309)
scaffold0077 (35-228)||(52596-52787)
[»] chr6 (31 HSPs)
chr6 (25-234)||(7311634-7311842)
chr6 (25-197)||(17837651-17837823)
chr6 (25-196)||(29381639-29381810)
chr6 (25-196)||(18346659-18346830)
chr6 (121-236)||(6452516-6452631)
chr6 (30-197)||(23397270-23397435)
chr6 (25-197)||(23392249-23392421)
chr6 (136-239)||(34023879-34023982)
chr6 (25-203)||(5187531-5187709)
chr6 (125-236)||(34024073-34024183)
chr6 (123-244)||(15730036-15730158)
chr6 (105-218)||(232190-232302)
chr6 (30-197)||(29380226-29380391)
chr6 (121-209)||(6452307-6452395)
chr6 (105-197)||(17839128-17839220)
chr6 (61-233)||(7310275-7310445)
chr6 (31-196)||(12669759-12669923)
chr6 (105-203)||(5186597-5186695)
chr6 (122-232)||(27967055-27967165)
chr6 (65-203)||(32506976-32507113)
chr6 (121-203)||(2687259-2687341)
chr6 (122-238)||(27080918-27081034)
chr6 (105-196)||(6702860-6702950)
chr6 (25-96)||(11967351-11967422)
chr6 (122-196)||(6701416-6701490)
chr6 (120-203)||(2687928-2688011)
chr6 (78-203)||(29722692-29722815)
chr6 (235-285)||(32670284-32670334)
chr6 (235-276)||(12340654-12340695)
chr6 (149-209)||(233597-233657)
chr6 (25-96)||(11722921-11722992)
[»] scaffold0031 (2 HSPs)
scaffold0031 (25-233)||(125140-125350)
scaffold0031 (25-234)||(123967-124173)
[»] chr7 (61 HSPs)
chr7 (25-231)||(43460732-43460938)
chr7 (25-218)||(32255003-32255197)
chr7 (25-234)||(47454335-47454542)
chr7 (25-238)||(40811334-40811527)
chr7 (27-197)||(13564150-13564320)
chr7 (46-238)||(47456314-47456497)
chr7 (62-234)||(32256343-32256513)
chr7 (25-234)||(47059106-47059317)
chr7 (120-235)||(6173454-6173569)
chr7 (121-235)||(33096866-33096980)
chr7 (25-233)||(40508377-40508584)
chr7 (27-197)||(22336014-22336184)
chr7 (30-234)||(43459453-43459655)
chr7 (57-235)||(41078753-41078931)
chr7 (58-234)||(40509677-40509852)
chr7 (38-233)||(47060400-47060592)
chr7 (25-203)||(11502330-11502509)
chr7 (122-240)||(32602925-32603043)
chr7 (40-203)||(40812539-40812700)
chr7 (121-235)||(45454035-45454149)
chr7 (82-235)||(30310118-30310270)
chr7 (30-203)||(11501209-11501380)
chr7 (58-234)||(22115107-22115283)
chr7 (122-234)||(4300054-4300166)
chr7 (25-196)||(22537595-22537766)
chr7 (46-218)||(41079767-41079936)
chr7 (122-233)||(45455378-45455489)
chr7 (27-203)||(30334554-30334724)
chr7 (122-209)||(30333308-30333395)
chr7 (105-203)||(22538837-22538935)
chr7 (121-234)||(30311474-30311587)
chr7 (105-236)||(22690363-22690495)
chr7 (120-232)||(24282980-24283091)
chr7 (25-89)||(35295841-35295905)
chr7 (122-235)||(4298710-4298823)
chr7 (73-203)||(22337330-22337457)
chr7 (122-208)||(11344531-11344614)
chr7 (235-315)||(44933507-44933587)
chr7 (25-96)||(669299-669369)
chr7 (25-96)||(2414880-2414951)
chr7 (64-235)||(33779036-33779203)
chr7 (25-96)||(43441481-43441552)
chr7 (25-96)||(46201266-46201337)
chr7 (235-315)||(1461314-1461394)
chr7 (25-197)||(3413567-3413738)
chr7 (121-209)||(3414839-3414927)
chr7 (25-96)||(44372864-44372935)
chr7 (25-96)||(44381720-44381791)
chr7 (66-197)||(13562857-13562986)
chr7 (121-209)||(24281097-24281186)
chr7 (120-203)||(40738842-40738926)
chr7 (25-96)||(39981452-39981523)
chr7 (25-96)||(41328354-41328425)
chr7 (324-378)||(11274481-11274535)
chr7 (235-297)||(18880420-18880481)
chr7 (121-163)||(24844330-24844372)
chr7 (122-196)||(35664287-35664361)
chr7 (235-304)||(38831787-38831856)
chr7 (68-96)||(15992270-15992298)
chr7 (151-203)||(38539700-38539752)
chr7 (235-315)||(38919567-38919647)
[»] chr1 (50 HSPs)
chr1 (25-236)||(45584917-45585129)
chr1 (25-234)||(50444609-50444816)
chr1 (63-235)||(15072738-15072909)
chr1 (26-234)||(27814290-27814497)
chr1 (25-203)||(15232781-15232959)
chr1 (46-235)||(46111427-46111607)
chr1 (25-238)||(14470850-14471062)
chr1 (24-196)||(16965034-16965207)
chr1 (32-232)||(35943364-35943563)
chr1 (30-203)||(16963863-16964034)
chr1 (123-244)||(52627503-52627625)
chr1 (25-235)||(34351875-34352075)
chr1 (122-243)||(52628879-52629000)
chr1 (65-203)||(49802846-49802982)
chr1 (121-235)||(24499660-24499774)
chr1 (25-177)||(46110337-46110487)
chr1 (30-235)||(16123284-16123488)
chr1 (25-196)||(49801653-49801824)
chr1 (121-244)||(14477796-14477919)
chr1 (120-235)||(15071339-15071454)
chr1 (121-203)||(44278354-44278436)
chr1 (235-315)||(5521975-5522055)
chr1 (25-203)||(46467175-46467351)
chr1 (112-203)||(15234037-15234128)
chr1 (58-241)||(23091342-23091525)
chr1 (27-241)||(41872567-41872780)
chr1 (25-235)||(41873881-41874090)
chr1 (32-113)||(13147333-13147412)
chr1 (25-146)||(44999372-44999492)
chr1 (25-96)||(48527669-48527740)
chr1 (122-228)||(50442628-50442734)
chr1 (58-103)||(34350241-34350286)
chr1 (123-196)||(51042350-51042422)
chr1 (32-96)||(9226132-9226196)
chr1 (25-77)||(12665944-12665996)
chr1 (30-93)||(10711926-10711989)
chr1 (30-93)||(10722291-10722354)
chr1 (41-96)||(15746692-15746747)
chr1 (25-96)||(26802075-26802146)
chr1 (25-96)||(52078054-52078125)
chr1 (35-96)||(3617417-3617478)
chr1 (32-97)||(9485221-9485286)
chr1 (25-96)||(14478401-14478472)
chr1 (25-96)||(18821649-18821720)
chr1 (105-196)||(44276158-44276249)
chr1 (46-196)||(48096963-48097111)
chr1 (25-96)||(51445725-51445796)
chr1 (120-198)||(30535673-30535751)
chr1 (171-236)||(33369250-33369315)
chr1 (235-302)||(52293858-52293927)
[»] scaffold0118 (2 HSPs)
scaffold0118 (25-225)||(43483-43684)
scaffold0118 (133-196)||(42443-42506)
[»] scaffold0034 (2 HSPs)
scaffold0034 (25-235)||(109656-109864)
scaffold0034 (25-234)||(108511-108720)
[»] scaffold0011 (1 HSPs)
scaffold0011 (27-203)||(127462-127637)
[»] scaffold1152 (1 HSPs)
scaffold1152 (46-196)||(2407-2556)
[»] scaffold0019 (2 HSPs)
scaffold0019 (25-210)||(63041-63225)
scaffold0019 (122-209)||(61874-61961)
[»] scaffold0201 (1 HSPs)
scaffold0201 (25-239)||(21120-21333)
[»] scaffold0078 (1 HSPs)
scaffold0078 (121-209)||(18835-18923)
[»] scaffold0013 (1 HSPs)
scaffold0013 (25-133)||(32670-32778)
[»] scaffold2071 (1 HSPs)
scaffold2071 (25-86)||(591-652)
[»] scaffold0219 (1 HSPs)
scaffold0219 (25-96)||(8101-8171)
[»] scaffold1251 (1 HSPs)
scaffold1251 (78-218)||(1048-1187)
[»] scaffold0001 (1 HSPs)
scaffold0001 (235-295)||(197079-197139)
[»] scaffold0472 (1 HSPs)
scaffold0472 (105-147)||(734-776)


Alignment Details
Target: chr5 (Bit Score: 400; Significance: 0; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 400; E-Value: 0
Query Start/End: Original strand, 25 - 551
Target Start/End: Original strand, 27705225 - 27705754
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggat 124  Q
    |||||||||||||||||||||||||||| ||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  27705225 caaacggtttaaattaaaaatattaataggatctatggtggaccacttttaaggttggtccaccatagacatcatttggattaaagttaactgtctgtat 27705324  T
Q  125 ttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaat 224  Q
    |||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||  ||||||||||||||||||||| ||||||||||||||||||||    
T  27705325 ttatttggcaaaaggaggaaaatctgagggaccaaaacgtacgttttattaattgtatgaccaaaatgaaaacttgaaattatttgaggaaccattgaat 27705424  T
Q  225 caaataagccttaatttaatgcacttatttgaagttttttaagtttttaagtatcaaataggtctttaaaaggttaacaaagacctattt---gnnnnnn 321  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||              
T  27705425 caaataagtcttaatttaatgcacttatttaaagttttttaagtttttaagtatcaaataagtctttaaaaggttaacaaagacatatttaaaacttaaa 27705524  T
Q  322 nncttaaaatactaacatgatgtttttattaaagttaaatgaccaaaagaggtatttgacctttaggatattaaactttgaaaaaatatgacatcttgaa 421  Q
      |||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  27705525 aacttaaaatactaacctgatatttttattaaacttaaatgaccaaaagaggtatttgacctttagaatattaaactttgaaaaaacatgacatcttgaa 27705624  T
Q  422 aattagaagaagaataaatgtgcaattgttaaaggaaataacagaaatggcttgtacatatcatggatagttcaactactttgggaagaatgttgtagca 521  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  27705625 aattagaagaagaataaatgtgcaattgttaaaggaaataacagaaatggcttgtacatgtcatggatagttcaactacattgggaagaatgttgtagca 27705724  T
Q  522 tattaaatttagtgtgataaaaaactatat 551  Q
    ||||||||||||||||||||||||||||||    
T  27705725 tattaaatttagtgtgataaaaaactatat 27705754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 25 - 241
Target Start/End: Complemental strand, 22047940 - 22047723
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctgga 123  Q
    |||||||||||||||||||  ||| ||| |||||||| ||||||||||||||||||| ||||||||||||||||||| || ||||| ||||| | | |||    
T  22047940 caaacggtttaaattaaaataattcataggatttatggtggaccactcttaaggttgatccaccatagacatcatttagagttaaacttaacagccagga 22047841  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaa 223  Q
    |||||||||||||||||||||||  ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| || || ||| ||||||| |    
T  22047840 tttatttggcaaacggaggaaaaaatgagggaccaaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattaattaagggaccattgga 22047741  T
Q  224 tcaaataagccttaattt 241  Q
    ||||||||||||| ||||    
T  22047740 tcaaataagcctttattt 22047723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 25 - 241
Target Start/End: Original strand, 325096 - 325310
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggat 124  Q
    ||||||||| ||||||| || ||||||||| | || ||||||||||| ||||||||||||||||||||||||  || |  ||||||||||| ||| ||||    
T  325096 caaacggttaaaattaacaaaattaataaggtctacgatggaccactattaaggttggtccaccatagacat--ttagagttaaagttaacagtcgggat 325193  T
Q  125 ttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaat 224  Q
    ||||||||||||||||||||||  ||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||  ||    
T  325194 ttatttggcaaacggaggaaaacttgagggaccaaaaggtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggaccattagat 325293  T
Q  225 caaataagccttaattt 241  Q
    |||||||||||| ||||    
T  325294 caaataagcctttattt 325310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 25 - 236
Target Start/End: Original strand, 30859080 - 30859292
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctgga 123  Q
    |||||||||||||||||||  ||||||| ||| |||| ||||||||||||||| |||||||||||||||||||||||||  ||||| ||||| |||  ||    
T  30859080 caaacggtttaaattaaaataattaataggatctatggtggaccactcttaagattggtccaccatagacatcatttggggttaaacttaacggtcaaga 30859179  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaa 223  Q
     ||||||||||||| ||||||||| ||||||||  ||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||| || | ||||    
T  30859180 cttatttggcaaacagaggaaaatgtgagggacttaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggactaatgaa 30859279  T
Q  224 tcaaataagcctt 236  Q
    |||||||||||||    
T  30859280 tcaaataagcctt 30859292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 25 - 232
Target Start/End: Complemental strand, 39604061 - 39603853
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctgga 123  Q
    ||||| |||||||||||||  ||||||| ||| |||| |||| |||| |||||||||||| ||||||||||||||||||  ||||| ||||| |||  ||    
T  39604061 caaacagtttaaattaaaataattaataggatctatggtggatcacttttaaggttggtctaccatagacatcatttggggttaaacttaacagtcatga 39603962  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaa 223  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||| |||||||||||||||||| ||||||||| | || || |    
T  39603961 tttatttggcaaacggaggaaaatttgagggaccaaaacgtacgttttattaattgtgggatcaaaatgaaaacttgaaattatttgagggatcaatgga 39603862  T
Q  224 tcaaataag 232  Q
    |||||||||    
T  39603861 tcaaataag 39603853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 108 - 231
Target Start/End: Original strand, 39605461 - 39605584
Alignment:
Q  108 aagttaactgtctggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaat-a 206  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |    
T  39605461 aagttaaccgtcaggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttttattaattgtgggaccaaaatgaaaacttgaaattaa 39605560  T
Q  207 tttgaggaaccattgaatcaaataa 231  Q
    || |||| |||||||||||||||||    
T  39605561 ttagagg-accattgaatcaaataa 39605584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 25 - 203
Target Start/End: Complemental strand, 30910949 - 30910770
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgg-attaaagttaactgtctgga 123  Q
    ||||||||| |||||||||  ||||||| ||| |||| ||||||||||||||||||||||||||| |||||||||||||  ||||||||||| |||  ||    
T  30910949 caaacggttgaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccaaagacatcatttggtgttaaagttaacagtcgaga 30910850  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    ||||||||| |||| ||||||||| |||||||| ||||||    || ||||||||||||||||||||||||||| |||||    
T  30910849 tttatttggtaaacagaggaaaatgtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaa 30910770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 46 - 234
Target Start/End: Complemental strand, 30857984 - 30857798
Alignment:
Q  46 attaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggatttatttggcaaacggaggaaa 145  Q
    ||||||||| | | |||| ||||||| |||||||||||||| |||||||||  ||    ||||||||||||||   |||||||||| |||| ||||||||    
T  30857984 attaataaggtctctgatagaccacttttaaggttggtccatcatagacat--ttaaagttaaagttaactgttaagatttatttgacaaaaggaggaaa 30857887  T
Q  146 atctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaat-atttgaggaaccattgaatcaaataagcc 234  Q
    |||||| |||||||||| || ||| ||||||||||||||||||||||||||||| ||| | ||| |||| ||||||||||||||||||||    
T  30857886 atctgaaggaccaaaacatacgttttattaattgtgggaccaaaatgaaaacttaaaattaattagagg-accattgaatcaaataagcc 30857798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 25 - 209
Target Start/End: Original strand, 22308709 - 22308892
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtc-tgga 123  Q
    |||| |||||| ||||||||  |||||||  | |||| ||||||||||||||||| ||||||||||||||||  || || ||||| |||||   | ||||    
T  22308709 caaatggtttacattaaaaaatttaataatgtctatggtggaccactcttaaggtaggtccaccatagacat--ttggggttaaacttaacaaccatgga 22308806  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatattt 209  Q
    |||||||||||||||||| ||||| |||||||| ||||||  |||| |||||||| |||||||||||||||||| ||||| |||||    
T  22308807 tttatttggcaaacggagcaaaatgtgagggactaaaacgcctgttttattaattatgggaccaaaatgaaaacatgaaattattt 22308892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 36 - 203
Target Start/End: Original strand, 30912084 - 30912249
Alignment:
Q  36 aattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctggatttatttggca 134  Q
    |||||| || ||||||||| | ||||||| |||||| |||||||||||||||||||||    ||||||| |||||||||||  |  ||||||||||||||    
T  30912084 aattaacaaaattaataaggtctatgatgtaccacttttaaggttggtccaccataga---tatttggagttaaagttaacacttgggatttatttggca 30912180  T
Q  135 aacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    ||||||| ||||  |||||||| ||||||    || ||||||||||||||||||||||||||| |||||    
T  30912181 aacggagaaaaaggtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaa 30912249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 25 - 203
Target Start/End: Complemental strand, 8521459 - 8521284
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggat 124  Q
    |||| |||| |||||||| | ||||||| ||| |||| ||||||| ||||||||||||||||||||| ||||  || || ||||||||||| ||| ||||    
T  8521459 caaagggttgaaattaaata-attaataggatctatggtggaccattcttaaggttggtccaccatacacat--ttggggttaaagttaaccgtcgggat 8521363  T
Q  125 ttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    ||||||| |  ||||||  |||  |||||||||||||| |  ||| ||||| || ||||||||||||||||||||||||    
T  8521362 ttatttgactgacggagacaaacgtgagggaccaaaacatgagttttattagttatgggaccaaaatgaaaacttgaaa 8521284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 121 - 209
Target Start/End: Original strand, 22049141 - 22049229
Alignment:
Q  121 ggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatattt 209  Q
    ||||||||||| ||||| ||||||||  ||||||||||||||||| ||| |||||||| |||||||||||||||||||||||| |||||    
T  22049141 ggatttatttgccaaacagaggaaaaagtgagggaccaaaacgtacgttttattaattatgggaccaaaatgaaaacttgaaattattt 22049229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 25 - 203
Target Start/End: Original strand, 1010276 - 1010451
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggat 124  Q
    |||| |||| |||||||| | ||||||| ||| ||||  |||||||||||||||||||||||||||| ||||  || || ||||||||||| ||| ||||    
T  1010276 caaagggttgaaattaaata-attaataggatctatggcggaccactcttaaggttggtccaccatacacat--ttggggttaaagttaaccgtcgggat 1010372  T
Q  125 ttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    ||||||| |  ||||||  |||  |||||||||||||| |  ||| ||||| || |||||||||||| |||||||||||    
T  1010373 ttatttgactgacggagacaaacgtgagggaccaaaacatgagttttattagttatgggaccaaaataaaaacttgaaa 1010451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 46 - 146
Target Start/End: Complemental strand, 15548424 - 15548323
Alignment:
Q  46 attaataagatttatgatggaccactcttaaggttggtccaccatagacatcattt-ggattaaagttaactgtctggatttatttggcaaacggaggaa 144  Q
    ||||||| |||||||| |||| || ||||||||||||||||||| ||||||||||| || ||||| ||||| | | ||||||||||||||||||||||||    
T  15548424 attaataggatttatggtggatcattcttaaggttggtccaccagagacatcatttagggttaaacttaacaggcaggatttatttggcaaacggaggaa 15548325  T
Q  145 aa 146  Q
    ||    
T  15548324 aa 15548323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 1102824 - 1102753
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacat 96  Q
    |||||||||||||||||||  ||||||||||| |||| |||||||||||||||||||||| |||||||||||    
T  1102824 caaacggtttaaattaaaataattaataagatctatggtggaccactcttaaggttggtctaccatagacat 1102753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 25 - 203
Target Start/End: Original strand, 33173869 - 33174047
Alignment:
Q  25 caaacggtttaaatt-aaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtct-gg 122  Q
    ||||||||| ||||| ||||| |||||| |  | |||| | ||||||||||||||||||||||||||||||||  || || ||||| ||||| | |  ||    
T  33173869 caaacggttaaaatttaaaaaaattaatgaagtctatggtagaccactcttaaggttggtccaccatagacat--ttggggttaaacttaacagccaagg 33173966  T
Q  123 atttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    ||||||||||||||| ||||||||  |||||||| ||||||    || |||||| ||||||| |||||||||||| |||||    
T  33173967 atttatttggcaaacagaggaaaaggtgagggactaaaacgccatttttattaaatgtgggatcaaaatgaaaacatgaaa 33174047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 236 - 291
Target Start/End: Complemental strand, 34445127 - 34445072
Alignment:
Q  236 taatttaatgcacttatttgaagttttttaagtttttaagtatcaaataggtcttt 291  Q
    ||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||    
T  34445127 taatttaatgcacatatttgaagtttttcaagtttttaagtttcaaataggtcttt 34445072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 9220367 - 9220441
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccac---tcttaaggttggtccaccatagacat 96  Q
    |||||||||||||||||||  ||||||||||||||||  |||||||   |||||| |||||||||||||||||||    
T  9220367 caaacggtttaaattaaaataattaataagatttatgggggaccactcttcttaatgttggtccaccatagacat 9220441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 11494925 - 11494977
Alignment:
Q  235 ttaatttaatgcacttatttgaagttttttaagtttttaagtatcaaataggt 287  Q
    |||||||||||||| ||||||||||||| ||||||||||||| ||||||||||    
T  11494925 ttaatttaatgcacctatttgaagttttataagtttttaagtttcaaataggt 11494977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 173 - 233
Target Start/End: Original strand, 41798004 - 41798064
Alignment:
Q  173 ttaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaatcaaataagc 233  Q
    ||||||||||||||||||| ||||||||||| ||||||||| |||| || |||||||||||    
T  41798004 ttaattgtgggaccaaaataaaaacttgaaattatttgagggaccaatggatcaaataagc 41798064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 58 - 203
Target Start/End: Original strand, 8523688 - 8523833
Alignment:
Q  58 tatgatggaccactcttaaggttggtccaccatagacatcatttgga---ttaaagttaactgtctggatttatttggcaaacggaggaaaatctgaggg 154  Q
    |||| ||||||||||| ||||||||||||||||| ||||  |||||    ||||||||||||||| ||||||||||| |  ||||||  |||  ||| ||    
T  8523688 tatggtggaccactctgaaggttggtccaccata-acat--tttggggggttaaagttaactgtcaggatttatttgactgacggagacaaacatgaagg 8523784  T
Q  155 accaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    | |||||| |  ||| ||||| || ||||||||||||||||||||||||    
T  8523785 atcaaaacatgagttttattagttatgggaccaaaatgaaaacttgaaa 8523833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 92
Target Start/End: Complemental strand, 11262599 - 11262532
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatag 92  Q
    |||| ||||||||||| ||  ||||||| ||| |||| ||||||||||||||||||||||||||||||    
T  11262599 caaatggtttaaattataataattaataggatctatggtggaccactcttaaggttggtccaccatag 11262532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 235 - 303
Target Start/End: Original strand, 7119215 - 7119282
Alignment:
Q  235 ttaatttaatgcacttatttgaagttttttaagtttttaagtatcaaataggtctttaaaaggttaaca 303  Q
    |||||||||||||| | |||||||||||||||| |||||| | ||||||||||| |||||||| |||||    
T  7119215 ttaatttaatgcacctttttgaagttttttaag-ttttaaatttcaaataggtccttaaaagggtaaca 7119282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 11502028 - 11502080
Alignment:
Q  235 ttaatttaatgcacttatttgaagttttttaagtttttaagtatcaaataggt 287  Q
    |||||||||||||| ||||||||||||| || |||||||||| ||||||||||    
T  11502028 ttaatttaatgcacctatttgaagttttatacgtttttaagtttcaaataggt 11502080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 11509424 - 11509476
Alignment:
Q  235 ttaatttaatgcacttatttgaagttttttaagtttttaagtatcaaataggt 287  Q
    |||||||||||||| ||||||||||||| || |||||||||| ||||||||||    
T  11509424 ttaatttaatgcacctatttgaagttttatacgtttttaagtttcaaataggt 11509476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 11516797 - 11516849
Alignment:
Q  235 ttaatttaatgcacttatttgaagttttttaagtttttaagtatcaaataggt 287  Q
    |||||||||||||| ||||||||||||| || |||||||||| ||||||||||    
T  11516797 ttaatttaatgcacctatttgaagttttatacgtttttaagtttcaaataggt 11516849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 11524199 - 11524251
Alignment:
Q  235 ttaatttaatgcacttatttgaagttttttaagtttttaagtatcaaataggt 287  Q
    |||||||||||||| ||||||||||||| || |||||||||| ||||||||||    
T  11524199 ttaatttaatgcacctatttgaagttttatacgtttttaagtttcaaataggt 11524251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 11531610 - 11531662
Alignment:
Q  235 ttaatttaatgcacttatttgaagttttttaagtttttaagtatcaaataggt 287  Q
    |||||||||||||| ||||||||||||| || |||||||||| ||||||||||    
T  11531610 ttaatttaatgcacctatttgaagttttatacgtttttaagtttcaaataggt 11531662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 11562562 - 11562614
Alignment:
Q  235 ttaatttaatgcacttatttgaagttttttaagtttttaagtatcaaataggt 287  Q
    |||||||||||||| ||||||||||||| || |||||||||| ||||||||||    
T  11562562 ttaatttaatgcacctatttgaagttttatacgtttttaagtttcaaataggt 11562614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 324224 - 324174
Alignment:
Q  46 attaataagatttatgatggaccactcttaaggttggtccaccatagacat 96  Q
    ||||||||| | |||||||||||||| |||| |||||||||||||||||||    
T  324224 attaataaggtctatgatggaccactattaaagttggtccaccatagacat 324174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 125 - 235
Target Start/End: Complemental strand, 15941380 - 15941271
Alignment:
Q  125 ttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaat 224  Q
    ||||||| |||||||| |||||  ||||||||||||  ||| ||| |||||||| ||| | |||||||||||||| |||||  |||| | ||| ||| ||    
T  15941380 ttatttgacaaacggaagaaaaagtgagggaccaaatggtacgttttattaattatggaatcaaaatgaaaactt-aaaattattgaaggaccgttggat 15941282  T
Q  225 caaataagcct 235  Q
    |||||||||||    
T  15941281 caaataagcct 15941271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 22307619 - 22307537
Alignment:
Q  121 ggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    ||||||||||||||||| ||| ||||  |||||||| |||||   |||| |||||||| ||| |||||||||||||| |||||    
T  22307619 ggatttatttggcaaacagagcaaaaagtgagggactaaaacacctgttttattaattatggaaccaaaatgaaaacatgaaa 22307537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 218
Target Start/End: Complemental strand, 32757978 - 32757839
Alignment:
Q  78 gttggtccaccatagacatcatttggattaaagttaactgtc-tggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaa 176  Q
    |||||||||||||||||||  || || |||||||||||   | |||||||||||| |   ||||||  ||  |||||||||||||| |  ||| |||||     
T  32757978 gttggtccaccatagacat--ttggggttaaagttaacacccatggatttatttgaccggcggaggtgaacttgagggaccaaaacatgagttttattat 32757881  T
Q  177 ttgtgggaccaaaatgaaaacttgaaaatatttgaggaacca 218  Q
    || ||||||||||||||||||| |||| ||||||||| ||||    
T  32757880 ttatgggaccaaaatgaaaactggaaattatttgagggacca 32757839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 235 - 288
Target Start/End: Original strand, 321929 - 321982
Alignment:
Q  235 ttaatttaatgcacttatttgaagttttttaagtttttaagtatcaaataggtc 288  Q
    |||||| ||||||| ||||||||| ||||||||||||||||  |||||||||||    
T  321929 ttaattcaatgcacctatttgaagctttttaagtttttaagcttcaaataggtc 321982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 46 - 91
Target Start/End: Complemental strand, 1009370 - 1009325
Alignment:
Q  46 attaataagatttatgatggaccactcttaaggttggtccaccata 91  Q
    ||||||| ||| |||| |||||||||||||||||||||||||||||    
T  1009370 attaataggatctatggtggaccactcttaaggttggtccaccata 1009325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 35081357 - 35081418
Alignment:
Q  35 aaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacat 96  Q
    |||||||||| |||| |||| |||||| ||||| ||||||||||||| ||||| ||||||||    
T  35081357 aaattaaaaaaattattaaggtttatggtggacaactcttaaggttgatccactatagacat 35081418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 232
Target Start/End: Complemental strand, 11262324 - 11262256
Alignment:
Q  164 tatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaatcaaataag 232  Q
    |||||| ||||||||||||||| ||||||||||||| ||| |||||  ||||||| || || |||||||    
T  11262324 tatgttttattaattgtgggactaaaatgaaaacttaaaattatttagggaaccaatggataaaataag 11262256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 235 - 270
Target Start/End: Complemental strand, 14023387 - 14023352
Alignment:
Q  235 ttaatttaatgcacttatttgaagttttttaagttt 270  Q
    ||||||||||||| ||||||||||||||||||||||    
T  14023387 ttaatttaatgcatttatttgaagttttttaagttt 14023352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 24503295 - 24503220
Alignment:
Q  121 ggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaa 196  Q
    |||||| |||||||||| |||  ||| || ||||||||||| ||| ||| ||||| || |||||||||||||||||    
T  24503295 ggatttttttggcaaacagagagaaaactaagggaccaaaaggtacgttttattacttatgggaccaaaatgaaaa 24503220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 24509041 - 24509116
Alignment:
Q  121 ggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaa 196  Q
    |||||| |||||||||| |||  ||| || ||||||||||| ||| ||| ||||| || |||||||||||||||||    
T  24509041 ggatttttttggcaaacagagagaaaactaagggaccaaaaggtacgttttattacttatgggaccaaaatgaaaa 24509116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 121 - 235
Target Start/End: Complemental strand, 34894260 - 34894146
Alignment:
Q  121 ggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccatt 220  Q
    |||||| ||||||||||||||  ||| || ||||||||||| |||  || ||||| ||  |||||||||||||||| | |||| || || ||| |||| |    
T  34894260 ggatttttttggcaaacggagacaaaactaagggaccaaaaggtactttttattacttacgggaccaaaatgaaaaatggaaattaattaagggaccaat 34894161  T
Q  221 gaatcaaataagcct 235  Q
    | ||| |||||||||    
T  34894160 ggatctaataagcct 34894146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 10735966 - 10735901
Alignment:
Q  28 acggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccataga 93  Q
    ||||||||||||||||  ||||||| ||| |||| |||||  || |||| ||||||||||||||||    
T  10735966 acggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccataga 10735901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 20539256 - 20539301
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccac 70  Q
    |||||||||||||||||||| ||||||||| | |||||| ||||||    
T  20539256 caaacggtttaaattaaaaaaattaataaggtctatgatagaccac 20539301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 11539080 - 11539132
Alignment:
Q  235 ttaatttaatgcacttatttgaagttttttaagtttttaagtatcaaataggt 287  Q
    |||||||||| ||| ||||||||||||| || ||||||| || ||||||||||    
T  11539080 ttaatttaatacacctatttgaagttttatatgtttttatgtttcaaataggt 11539132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 236 - 284
Target Start/End: Complemental strand, 23251814 - 23251766
Alignment:
Q  236 taatttaatgcacttatttgaagttttttaagtttttaagtatcaaata 284  Q
    |||||||||| || |||||||||||||||||||||| |||  |||||||    
T  23251814 taatttaatgtacatatttgaagttttttaagttttcaaggttcaaata 23251766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 128 - 196
Target Start/End: Original strand, 34898963 - 34899031
Alignment:
Q  128 tttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaa 196  Q
    ||||||||||||||  ||| || ||||||||||| |||  || ||||| || |||||||||||||||||    
T  34898963 tttggcaaacggagacaaaactaagggaccaaaatgtactttttattacttatgggaccaaaatgaaaa 34899031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 138; Significance: 7e-72; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 25 - 234
Target Start/End: Original strand, 45281098 - 45281306
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggat 124  Q
    |||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||    
T  45281098 caaacggtttaaattaaaaatattaataggatttatggtagaccactcttaaggttggtccaccgtagacatcatttggattaaagttaactgttgggat 45281197  T
Q  125 ttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaat 224  Q
    |||||||||||| |||||||||||||| ||| |||||| ||| || |||||||||| |||||||||||||||||||||| ||||||||| || |||| ||    
T  45281198 ttatttggcaaatggaggaaaatctgaaggatcaaaacatat-ttttattaattgttggaccaaaatgaaaacttgaaattatttgagggactattggat 45281296  T
Q  225 caaataagcc 234  Q
    ||||||||||    
T  45281297 caaataagcc 45281306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 25 - 235
Target Start/End: Original strand, 32798441 - 32798651
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggat 124  Q
    |||||||||||||||||||  ||||||| ||| |||| ||||||||||||||||||| ||||||||||||||||||||  ||||| ||||| ||  ||||    
T  32798441 caaacggtttaaattaaaataattaataggatctatggtggaccactcttaaggttgatccaccatagacatcatttgagttaaacttaaccgtgaggat 32798540  T
Q  125 ttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaat 224  Q
    ||||||| ||||||||| ||||  |||||||| |||| ||| ||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||    
T  32798541 ttatttgacaaacggagaaaaaattgagggactaaaaggtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggaccattgcat 32798640  T
Q  225 caaataagcct 235  Q
    |||||||||||    
T  32798641 caaataagcct 32798651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 25 - 236
Target Start/End: Original strand, 44076271 - 44076483
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctgga 123  Q
    |||| ||||||||||||||| |||||||||||||||| |||| || | |||| |||| |||||||||||||||||||||  ||||| ||||||||  |||    
T  44076271 caaatggtttaaattaaaaaaattaataagatttatggtggatcatttttaatgttgttccaccatagacatcatttggggttaaacttaactgtaggga 44076370  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaa 223  Q
    |||||||||||||||||||||||  ||||| |||||||  || ||| ||||||||||||||||||||| |||| |||||| ||||||||| ||||||| |    
T  44076371 tttatttggcaaacggaggaaaaattgaggcaccaaaagatacgttttattaattgtgggaccaaaataaaaatttgaaattatttgagggaccattgga 44076470  T
Q  224 tcaaataagcctt 236  Q
    |||||||||||||    
T  44076471 tcaaataagcctt 44076483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 25 - 235
Target Start/End: Original strand, 32695183 - 32695394
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctgga 123  Q
    |||||||||||||||||||  ||||||| ||| |||| ||||||| ||||||| ||||| |||||||||||||||||||  ||||| ||||| ||| |||    
T  32695183 caaacggtttaaattaaaataattaataggatctatggtggaccaatcttaagattggttcaccatagacatcatttggggttaaacttaacggtcagga 32695282  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaa 223  Q
     | ||||||||||| ||||||||  ||| ||||  ||||||| ||| ||||||||||| ||||||||||||||||||||| ||||||||| |||| ||||    
T  32695283 ctaatttggcaaacagaggaaaacgtgaaggacttaaacgtacgttttattaattgtgagaccaaaatgaaaacttgaaattatttgagggaccaatgaa 32695382  T
Q  224 tcaaataagcct 235  Q
    ||||||||||||    
T  32695383 tcaaataagcct 32695394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 25 - 234
Target Start/End: Complemental strand, 4810672 - 4810467
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctgga 123  Q
    ||||| |||||||||||||||||||||| ||| |||| ||||||||||||||      |||||||||||||||||||||  ||||||||||| ||| |||    
T  4810672 caaacagtttaaattaaaaatattaataggatctatggtggaccactcttaat-----tccaccatagacatcatttggggttaaagttaaccgtcggga 4810578  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaa 223  Q
    |||||||||||||||||| ||||| ||| |||||||||| || ||| |||||||| |||||||||||| |||| |||||| ||||||||| ||||||  |    
T  4810577 tttatttggcaaacggagaaaaatttgaaggaccaaaacatacgttttattaattatgggaccaaaataaaaatttgaaagtatttgagggaccattaga 4810478  T
Q  224 tcaaataagcc 234  Q
    |||||||||||    
T  4810477 tcaaataagcc 4810467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 25 - 234
Target Start/End: Complemental strand, 32694035 - 32693828
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggat 124  Q
    ||||||||| ||||||| || ||||||||| | |||||| | ||||| |||||||||||||| |||| ||||  ||    ||||||||||||||  ||||    
T  32694035 caaacggttaaaattaataaaattaataaggtctatgataggccacttttaaggttggtccatcatatacat--ttaaagttaaagttaactgttgggat 32693938  T
Q  125 ttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaat-atttgaggaaccattgaa 223  Q
    ||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||| ||| | ||| |||| |||||||||    
T  32693937 ttatttggcaaacggaggaaaatctgaaggaccaaagcgtatgttttattaattgtgggaccaaaatgaaaacttaaaattaattagagg-accattgaa 32693839  T
Q  224 tcaaataagcc 234  Q
    |||||||||||    
T  32693838 tcaaataagcc 32693828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 25 - 234
Target Start/End: Complemental strand, 42871021 - 42870811
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctgga 123  Q
    |||||||||||||||| |||  |||||||| | || | ||||||||||||||| ||||||||| ||||||||| |||||  ||||| ||||| ||| |||    
T  42871021 caaacggtttaaattacaaaatttaataaggtctacggtggaccactcttaagattggtccacaatagacatcttttggggttaaacttaacagtcagga 42870922  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaa 223  Q
    || ||| ||||||| || |||||  | |||||| |||||||| ||| ||||||||||||||||||||||||||||||||| |||||  | |||||||| |    
T  42870921 ttcattcggcaaacagacgaaaaagtaagggactaaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaggaaaccattgga 42870822  T
Q  224 tcaaataagcc 234  Q
    |||||||||||    
T  42870821 tcaaataagcc 42870811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 25 - 240
Target Start/End: Complemental strand, 30786883 - 30786668
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaa--gttaactgtctgg 122  Q
    ||||||||| ||||||| || ||||||||| |||||||||||||||| |||| |||| ||||||||||||||  || |  |||||  |||||| ||| |     
T  30786883 caaacggttaaaattaacaaaattaataaggtttatgatggaccacttttaaagttgatccaccatagacat--ttagagttaaaaagttaacagtcgga 30786786  T
Q  123 atttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattga 222  Q
    ||||||||||||||||||| ||||  ||||||| |||||  || ||| |||||||| || || |||||||||||||| ||| ||||||| | ||||||||    
T  30786785 atttatttggcaaacggagaaaaaagtgagggatcaaaatatacgttttattaattatgtgatcaaaatgaaaacttaaaattatttgaaggaccattga 30786686  T
Q  223 atcaaataagccttaatt 240  Q
    ||||||||||||||||||    
T  30786685 atcaaataagccttaatt 30786668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 121 - 235
Target Start/End: Complemental strand, 26696643 - 26696529
Alignment:
Q  121 ggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccatt 220  Q
    |||||||||||||||| |||||||||  ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| || ||  || ||||||    
T  26696643 ggatttatttggcaaatggaggaaaaagtgagggaccaaaatgtatgttttattaattgtgggaccaaaatgaaaacttgaaattaattaggggaccatt 26696544  T
Q  221 gaatcaaataagcct 235  Q
    |||||||||||||||    
T  26696543 gaatcaaataagcct 26696529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 41 - 235
Target Start/End: Original strand, 42872116 - 42872308
Alignment:
Q  41 aaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggatttatttggcaaacgga 140  Q
    |||| ||||||| ||| |||| | |||||||||||||||||||| |||||||||||  ||  | ||||||||||| ||| ||||||||||| ||||||||    
T  42872116 aaaaaattaataggatctatggtagaccactcttaaggttggtctaccatagacat--ttgaggttaaagttaaccgtcaggatttatttgacaaacgga 42872213  T
Q  141 ggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaatcaaataagcct 235  Q
    ||||||  ||| |||| |||||||| ||| |||| ||| || ||  ||||||||||||| ||| ||||| ||| ||||||| |||||||||||||    
T  42872214 ggaaaaagtgaaggactaaaacgtacgttttattcattatgagattaaaatgaaaacttaaaattatttaagggaccattggatcaaataagcct 42872308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 25 - 203
Target Start/End: Original strand, 13117542 - 13117720
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggat 124  Q
    ||||||||| | |||||||  ||||||| ||| |||||||||||||| |||| |||||||||| ||| | ||||||||| ||||| || |  ||| ||||    
T  13117542 caaacggttgatattaaaataattaataggatctatgatggaccacttttaaagttggtccactatatagatcatttgggttaaacttgatggtcgggat 13117641  T
Q  125 ttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    ||||||||||||| ||||||||| |||||||| ||||||    || |||||||| |||||||||||||||||| |||||    
T  13117642 ttatttggcaaacagaggaaaatgtgagggactaaaacgccatttttattaattatgggaccaaaatgaaaacatgaaa 13117720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 30 - 203
Target Start/End: Original strand, 42100022 - 42100193
Alignment:
Q  30 ggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctggatttat 128  Q
    |||| ||||||| || ||||||||| | || ||||||||||| ||||||||||||||||| ||||||   ||| | ||||||||||| ||| ||| ||||    
T  42100022 ggttaaaattaacaaaattaataaggtctacgatggaccacttttaaggttggtccaccaaagacat---ttgaagttaaagttaacagtcgggaattat 42100118  T
Q  129 ttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    ||||||||||||||||||| ||||||| |||||||    || ||||||||||| ||||||||||||||| |||||    
T  42100119 ttggcaaacggaggaaaatatgagggatcaaaacgccatttttattaattgtgagaccaaaatgaaaacatgaaa 42100193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 25 - 203
Target Start/End: Complemental strand, 42098770 - 42098592
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcattt-ggattaaagttaactgtctgga 123  Q
    ||||||||| ||||||||   ||||||| ||| |||| ||||||||| ||||||||||||||||| ||||||||||| || ||||| ||||| ||| |||    
T  42098770 caaacggttgaaattaaagtaattaataggatctatggtggaccacttttaaggttggtccaccaaagacatcatttggggttaaaattaacagtc-gga 42098672  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    ||||||||||||||||||  |||  || |||| |||||||    || ||||||||||||||||||||||||||| |||||    
T  42098671 tttatttggcaaacggagacaaacgtgggggatcaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaa 42098592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 25 - 213
Target Start/End: Complemental strand, 22551212 - 22551026
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtct-gga 123  Q
    |||||||||||||||| |||  |||||||| |||||| |||| |||| |||||||| |||||||||||| ||  || || ||||| |||||  ||  |||    
T  22551212 caaacggtttaaattacaaaatttaataaggtttatggtggatcacttttaaggtttgtccaccatagagat--ttggggttaaacttaacaatccagga 22551115  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgagg 213  Q
    ||||||||||||| |||| ||||  |||||||||||||  || ||| ||||||||||||||||||||| ||||||||||| |||||||||    
T  22551114 tttatttggcaaatggagaaaaag-tgagggaccaaaagatacgttttattaattgtgggaccaaaataaaaacttgaaattatttgagg 22551026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 25 - 209
Target Start/End: Complemental strand, 6397988 - 6397806
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctgga 123  Q
    |||| ||||||||||||||| ||||||||| | |||| ||||||||| | |||||||||  |||||||   | ||||||| ||||| |||||  ||  ||    
T  6397988 caaatggtttaaattaaaaaaattaataaggtctatggtggaccactgtaaaggttggtttaccatag---ttatttggagttaaatttaacattcatga 6397892  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatattt 209  Q
    |||||||||||||||||| ||||  |||||||| |||| ||| ||| ||||||||||||||||||||||||||  ||||| |||||    
T  6397891 tttatttggcaaacggagaaaaaaatgagggactaaaatgtaagttttattaattgtgggaccaaaatgaaaatatgaaattattt 6397806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 30 - 209
Target Start/End: Complemental strand, 41629908 - 41629731
Alignment:
Q  30 ggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctggatttat 128  Q
    |||| ||||||| || ||||||||| | || |||| |||||| ||||||||||| |||||||||| |   ||||| || |||||||| ||| ||||||||    
T  41629908 ggttaaaattaacaaaattaataaggtatacgatgaaccacttttaaggttggttcaccatagactt---ttggagttcaagttaacggtcgggatttat 41629812  T
Q  129 ttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatattt 209  Q
    |||||||||||| |||||  ||||||| |||||  || ||| ||||||||||| ||||||||| ||||||||||| |||||    
T  41629811 ttggcaaacggaagaaaacttgagggatcaaaatatacgttttattaattgtgagaccaaaataaaaacttgaaattattt 41629731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 125 - 234
Target Start/End: Complemental strand, 32797245 - 32797136
Alignment:
Q  125 ttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaat 224  Q
    |||||||| ||||||||||||| |||||||||  ||||||| ||| ||||||||||||||||||||||||||||||||| ||||| ||| |||| |  ||    
T  32797245 ttatttggtaaacggaggaaaacctgagggacttaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaagggaccaatagat 32797146  T
Q  225 caaataagcc 234  Q
    ||||||||||    
T  32797145 caaataagcc 32797136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 25 - 196
Target Start/End: Original strand, 8571526 - 8571697
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtct--gg 122  Q
    ||||| ||||||||||||||  |||||||| | |||| ||||||| | |||| |||||||||||||||||||  || || ||||| ||||| | ||  ||    
T  8571526 caaacagtttaaattaaaaagtttaataaggtatatggtggaccatttttaaagttggtccaccatagacat--ttggggttaaacttaacagactaggg 8571623  T
Q  123 atttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaa 196  Q
    |||||||||| |||||||| ||||  ||| ||||||||||||| ||| ||||||||||  ||||||||||||||    
T  8571624 atttatttggtaaacggagaaaaaaatgaaggaccaaaacgtacgttttattaattgtatgaccaaaatgaaaa 8571697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 105 - 235
Target Start/End: Complemental strand, 28418934 - 28418803
Alignment:
Q  105 ttaaagttaactgtctg-gatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    ||||||||||| || || |||||||||||||||||||||||||  |||||||| ||||||| |||| |||||||| ||||||||||||||||| ||||||    
T  28418934 ttaaagttaacagtttgagatttatttggcaaacggaggaaaaagtgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaaattgaaa 28418835  T
Q  204 atatttgaggaaccattgaatcaaataagcct 235  Q
     ||||| ||| |||| || ||| | |||||||    
T  28418834 ttatttaagggaccaatggatctattaagcct 28418803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 61 - 203
Target Start/End: Complemental strand, 13116499 - 13116359
Alignment:
Q  61 gatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctggatttatttggcaaacggaggaaaatctgagggaccaa 159  Q
    ||||||||||||| ||| |||||| |  ||||||||   ||||| ||||||||||| ||| ||||||||||||||||||||||||||| ||| |||| ||    
T  13116499 gatggaccactctgaagattggtctattatagacat---ttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgaaggactaa 13116403  T
Q  160 aacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    ||||    || ||||||||||||||||||||||||||| |||||    
T  13116402 aacgccacttttattaattgtgggaccaaaatgaaaacatgaaa 13116359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 105 - 236
Target Start/End: Original strand, 28420162 - 28420294
Alignment:
Q  105 ttaaagttaactgtctg-gatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    ||||||||||| || || |||||||||| ||||||||||||||  |||||||| ||||||| |||| |||||||| ||||||||||||||||| ||||||    
T  28420162 ttaaagttaacagtttgagatttatttgacaaacggaggaaaaaatgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaaattgaaa 28420261  T
Q  204 atatttgaggaaccattgaatcaaataagcctt 236  Q
     ||||| ||| |||| || ||| | ||||||||    
T  28420262 ttatttaagggaccaatggatctattaagcctt 28420294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 121 - 234
Target Start/End: Complemental strand, 8570229 - 8570116
Alignment:
Q  121 ggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccatt 220  Q
    ||||||||||||||||| |||  |||  ||||||||||||||||| ||| |||||||||| |||||||||||||||| ||||| || ||  || ||||||    
T  8570229 ggatttatttggcaaacagagacaaaagtgagggaccaaaacgtacgttttattaattgtaggaccaaaatgaaaacgtgaaattaattaggggaccatt 8570130  T
Q  221 gaatcaaataagcc 234  Q
    | ||||||||||||    
T  8570129 ggatcaaataagcc 8570116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 105 - 234
Target Start/End: Original strand, 30787589 - 30787718
Alignment:
Q  105 ttaaagttaactgtctggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaa 204  Q
    |||||||||||   | |||||||||||||||||||| |||||  |||||||||||||  ||| || |||||||| |||||||||||||||||||| |||     
T  30787589 ttaaagttaacatacaggatttatttggcaaacggaagaaaaagtgagggaccaaaatatatattttattaattatgggaccaaaatgaaaacttaaaat 30787688  T
Q  205 tatttgaggaaccattgaatcaaataagcc 234  Q
    ||||||||  | ||||  ||||||||||||    
T  30787689 tatttgagagaacattagatcaaataagcc 30787718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 203
Target Start/End: Complemental strand, 42877823 - 42877648
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggat 124  Q
    |||| |||| |||||||| | ||||||| ||| |||| ||||||| ||||||||||||||||||||| ||||  || || ||||||||||| ||| ||||    
T  42877823 caaagggttgaaattaaata-attaataggatctatggtggaccattcttaaggttggtccaccatacacat--ttggggttaaagttaaccgtcgggat 42877727  T
Q  125 ttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    ||||||| |  ||| ||  |||  |||||||||||||| |  ||| ||||| || || |||||||||||||||||||||    
T  42877726 ttatttgactgacgaagacaaacgtgagggaccaaaacatgagttttattagttatgagaccaaaatgaaaacttgaaa 42877648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 121 - 209
Target Start/End: Complemental strand, 211706 - 211618
Alignment:
Q  121 ggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatattt 209  Q
    |||||||||||| |||||||| ||||  | |||||| ||||||| |||| ||||||||||||||||||||||||||| ||||| |||||    
T  211706 ggatttatttggtaaacggagaaaaaattaagggactaaaacgtctgttttattaattgtgggaccaaaatgaaaacatgaaattattt 211618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 121 - 209
Target Start/End: Original strand, 240550 - 240638
Alignment:
Q  121 ggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatattt 209  Q
    |||||||||||| |||||||| ||||  | |||||| ||||||| |||| ||||||||||||||||||||||||||| ||||| |||||    
T  240550 ggatttatttggtaaacggagaaaaaattaagggactaaaacgtctgttttattaattgtgggaccaaaatgaaaacatgaaattattt 240638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 121 - 209
Target Start/End: Complemental strand, 725329 - 725241
Alignment:
Q  121 ggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatattt 209  Q
    |||||||||||| |||||||| ||||  | |||||| ||||||| |||| ||||||||||||||||||||||||||| ||||| |||||    
T  725329 ggatttatttggtaaacggagaaaaaattaagggactaaaacgtctgttttattaattgtgggaccaaaatgaaaacatgaaattattt 725241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 121 - 209
Target Start/End: Original strand, 793905 - 793993
Alignment:
Q  121 ggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatattt 209  Q
    |||||||||||| |||||||| ||||  | |||||| ||||||| |||| ||||||||||||||||||||||||||| ||||| |||||    
T  793905 ggatttatttggtaaacggagaaaaaattaagggactaaaacgtctgttttattaattgtgggaccaaaatgaaaacatgaaattattt 793993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 30 - 209
Target Start/End: Complemental strand, 45279880 - 45279703
Alignment:
Q  30 ggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggatttatt 129  Q
    |||| ||||||| || |||| |||| | || ||| ||||||| |||||  |||||||||||| ||||  || |  ||||||||||| ||| |||||||||    
T  45279880 ggttaaaattaacaaaattattaaggtctacgatagaccacttttaagactggtccaccatatacat--ttagagttaaagttaaccgtcgggatttatt 45279783  T
Q  130 tggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatattt 209  Q
    || |||||| |  ||||  ||||||||||||||||| ||| ||||||||||  ||| |||||||||| |||||| |||||    
T  45279782 tgccaaacgaaaaaaaacttgagggaccaaaacgtacgttttattaattgtatgactaaaatgaaaatttgaaattattt 45279703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 24192573 - 24192644
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacat 96  Q
    |||||||||| ||||||||  ||||||| ||| |||| ||||||||||||||||||||||||||||||||||    
T  24192573 caaacggttttaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccatagacat 24192644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 122 - 203
Target Start/End: Complemental strand, 17338151 - 17338070
Alignment:
Q  122 gatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    |||||||||||||||||||| ||||| |||||||| ||||||    || ||||||||||||||||||||||||||| |||||    
T  17338151 gatttatttggcaaacggagaaaaatgtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaa 17338070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 83 - 235
Target Start/End: Original strand, 41630091 - 41630243
Alignment:
Q  83 tccaccatagacatcatttgga-ttaaagttaactgtctggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtg 181  Q
    |||||| || |||||||||||  ||||| |||||| || ||||||||||  |||||  || ||||  ||||||||  ||| ||| ||| |||||||||||    
T  41630091 tccaccgtaaacatcatttggggttaaacttaact-tcgggatttatttaacaaacatagaaaaaattgagggacttaaaggtacgttttattaattgtg 41630189  T
Q  182 ggaccaaaatgaaaacttgaaaatatttgaggaaccattgaatcaaataagcct 235  Q
     ||| |||||||||| || ||| ||||| ||||||||||| |||||||||||||    
T  41630190 agactaaaatgaaaatttaaaattatttaaggaaccattggatcaaataagcct 41630243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 196
Target Start/End: Original strand, 6398486 - 6398577
Alignment:
Q  105 ttaaagttaactgtctggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaa 196  Q
    ||||| ||||| |||  |||||||||| ||||||||||||||  |||||||| ||||||  |||| |||||||| || ||||||||||||||    
T  6398486 ttaaacttaacagtcatgatttatttgacaaacggaggaaaaaatgagggactaaaacgcttgttttattaattatgagaccaaaatgaaaa 6398577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 9854789 - 9854860
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacat 96  Q
    |||| ||||||||||| ||  ||||||| ||| |||| |||||||||||||| |||||||||||||||||||    
T  9854789 caaatggtttaaattagaagaattaataggatctatggtggaccactcttaaagttggtccaccatagacat 9854860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 10669359 - 10669426
Alignment:
Q  29 cggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacat 96  Q
    |||||||||||||||   |||||| ||| |||| ||||||||||||||||||||| ||||||||||||    
T  10669359 cggtttaaattaaaatatttaataggatctatggtggaccactcttaaggttggttcaccatagacat 10669426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 14840809 - 14840880
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacat 96  Q
    ||||||||||||||||||||  |||||||||  |||| |||| |||| |||| |||||||||||||||||||    
T  14840809 caaacggtttaaattaaaaaatttaataagaactatggtggatcacttttaatgttggtccaccatagacat 14840880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 196
Target Start/End: Original strand, 17339538 - 17339629
Alignment:
Q  105 ttaaagttaactgtctggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaa 196  Q
    ||||| ||||| ||| ||||||||||||||||||||||||||  |||||||| |||| |    || |||||||||| |||||||||||||||    
T  17339538 ttaaacttaacagtcaggatttatttggcaaacggaggaaaacgtgagggactaaaatgccatttttattaattgttggaccaaaatgaaaa 17339629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 136 - 234
Target Start/End: Original strand, 13197961 - 13198059
Alignment:
Q  136 acggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaatcaaataagcc 234  Q
    |||||||||||  ||||||||  |||||||  || |||||||||||||||||||| ||||||| |||| ||||| | | ||||||| | ||||||||||    
T  13197961 acggaggaaaaagtgagggacttaaacgtaccttttattaattgtgggaccaaaacgaaaactcgaaattatttaatggaccattggagcaaataagcc 13198059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 42362671 - 42362732
Alignment:
Q  35 aaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatc 97  Q
    |||||||||| ||||||| ||| ||||||| ||||||||||| ||||||||||||||||||||    
T  42362671 aaattaaaaa-attaataggatctatgatgaaccactcttaatgttggtccaccatagacatc 42362732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 212718 - 212830
Alignment:
Q  122 gatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattg 221  Q
    |||||||||| |||||| |||||||  |||||||| |||||   |||| | ||||||||||||| ||||||||||  ||||| |||||| || || | ||    
T  212718 gatttatttgacaaacgaaggaaaaagtgagggactaaaacacctgtttttttaattgtgggacgaaaatgaaaatctgaaattatttgggggactaatg 212817  T
Q  222 aatcaaataagcc 234  Q
     ||||||||||||    
T  212818 gatcaaataagcc 212830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 239536 - 239424
Alignment:
Q  122 gatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattg 221  Q
    |||||||||| |||||| |||||||  |||||||| |||||   |||| | ||||||||||||| ||||||||||  ||||| |||||| || || | ||    
T  239536 gatttatttgacaaacgaaggaaaaagtgagggactaaaacacctgtttttttaattgtgggacgaaaatgaaaatctgaaattatttgggggactaatg 239437  T
Q  222 aatcaaataagcc 234  Q
     ||||||||||||    
T  239436 gatcaaataagcc 239424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 726341 - 726453
Alignment:
Q  122 gatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattg 221  Q
    |||||||||| |||||| |||||||  |||||||| |||||   |||| | ||||||||||||| ||||||||||  ||||| |||||| || || | ||    
T  726341 gatttatttgacaaacgaaggaaaaagtgagggactaaaacacctgtttttttaattgtgggacgaaaatgaaaatctgaaattatttgggggactaatg 726440  T
Q  222 aatcaaataagcc 234  Q
     ||||||||||||    
T  726441 gatcaaataagcc 726453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 792891 - 792779
Alignment:
Q  122 gatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattg 221  Q
    |||||||||| |||||| |||||||  |||||||| |||||   |||| | ||||||||||||| ||||||||||  ||||| |||||| || || | ||    
T  792891 gatttatttgacaaacgaaggaaaaagtgagggactaaaacacctgtttttttaattgtgggacgaaaatgaaaatctgaaattatttgggggactaatg 792792  T
Q  222 aatcaaataagcc 234  Q
     ||||||||||||    
T  792791 gatcaaataagcc 792779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 798842 - 798954
Alignment:
Q  122 gatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattg 221  Q
    |||||||||| |||||| |||||||  |||||||| |||||   |||| | ||||||||||||| ||||||||||  ||||| |||||| || || | ||    
T  798842 gatttatttgacaaacgaaggaaaaagtgagggactaaaacacctgtttttttaattgtgggacgaaaatgaaaatctgaaattatttgggggactaatg 798941  T
Q  222 aatcaaataagcc 234  Q
     ||||||||||||    
T  798942 gatcaaataagcc 798954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 192
Target Start/End: Complemental strand, 29103599 - 29103527
Alignment:
Q  120 tggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatg 192  Q
    ||||||||||| |||| ||||||||||  ||||||||  ||| ||| ||| ||||||||||||||||||||||    
T  29103599 tggatttatttagcaatcggaggaaaaaatgagggactcaaatgtacgttttattaattgtgggaccaaaatg 29103527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 199
Target Start/End: Complemental strand, 38696514 - 38696341
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactg-tctgga 123  Q
    |||| |||| |||||| ||| |||||| |||| |||| ||||||||| |||||||||||| |||||||||||  || || ||||| ||||  |    |||    
T  38696514 caaagggttaaaattataaaaattaattagatctatggtggaccacttttaaggttggtctaccatagacat--ttagggttaaacttaatagcaaggga 38696417  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaactt 199  Q
    |||||||| |  ||||||| |||  |||||||||||||| |  ||| ||||| || || |||||||||||||||||    
T  38696416 tttatttgaccgacggaggcaaacttgagggaccaaaacatgagttttattagttatgagaccaaaatgaaaactt 38696341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 20180584 - 20180655
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacat 96  Q
    |||||||||| ||||||||  ||||||| ||| |||| |||||||||||||| ||| |||||| ||||||||    
T  20180584 caaacggttttaattaaaataattaataggatctatggtggaccactcttaatgttagtccactatagacat 20180655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 235 - 297
Target Start/End: Complemental strand, 6344153 - 6344091
Alignment:
Q  235 ttaatttaatgcacttatttgaagttttttaagtttttaagtatcaaataggtctttaaaagg 297  Q
    |||||||||| ||| ||| ||||||||||||||||||||||| ||||| |  |||||||||||    
T  6344153 ttaatttaatacacctatatgaagttttttaagtttttaagtttcaaacaaatctttaaaagg 6344091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 235 - 296
Target Start/End: Complemental strand, 24476676 - 24476615
Alignment:
Q  235 ttaatttaatgcacttatttgaagttttttaagtttttaagtatcaaataggtctttaaaag 296  Q
    ||||| |||||||  |||||||| |||||||||||||||||| ||||||| ||| |||||||    
T  24476676 ttaatataatgcatctatttgaatttttttaagtttttaagtttcaaataagtccttaaaag 24476615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 12850465 - 12850513
Alignment:
Q  186 caaaatgaaaacttgaaaatatttgaggaaccattgaatcaaataagcc 234  Q
    ||||||||||| |||||| ||||||||| ||||||| ||||||||||||    
T  12850465 caaaatgaaaatttgaaattatttgagggaccattggatcaaataagcc 12850513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 93
Target Start/End: Complemental strand, 17455252 - 17455185
Alignment:
Q  26 aaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccataga 93  Q
    |||||||| |||||||||  ||||||||||| |||| ||||||||| ||||| |||||| | ||||||    
T  17455252 aaacggttcaaattaaaataattaataagatctatggtggaccacttttaagattggtctagcataga 17455185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 201
Target Start/End: Original strand, 29104371 - 29104450
Alignment:
Q  122 gatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttga 201  Q
    |||||||||| ||||| ||||||||  ||||||||  |||| || ||| |||||||||||||| |||||| |||| ||||    
T  29104371 gatttatttgacaaacagaggaaaaaatgagggacttaaacatacgttttattaattgtgggatcaaaataaaaatttga 29104450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 131
Target Start/End: Original strand, 42878761 - 42878846
Alignment:
Q  46 attaataagatttatgatggaccactcttaaggttggtccaccatagacatcattt---ggattaaagttaactgtctggatttatttg 131  Q
    ||||||| ||| |||| |||||||| |||||||||||||||||||| ||||  |||   || ||||||||||||||| |||||||||||    
T  42878761 attaataggatctatggtggaccacacttaaggttggtccaccata-acat--tttggggggttaaagttaactgtcaggatttatttg 42878846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 297
Target Start/End: Complemental strand, 17707980 - 17707919
Alignment:
Q  235 ttaatttaatgcacttatttgaagttttttaagtttttaagtatcaaataggtctttaaaagg 297  Q
    |||||||||||||| |||||||||| |||||| ||||||| | | ||||||||| ||||||||    
T  17707980 ttaatttaatgcacctatttgaagt-ttttaaatttttaaattttaaataggtccttaaaagg 17707919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 45437487 - 45437569
Alignment:
Q  121 ggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    ||||||||||| | | |||||| |||   ||||||||||||| |  ||| |||||||| ||||| ||||||||||||||||||    
T  45437487 ggatttatttgactagcggaggcaaacacgagggaccaaaacatgagttttattaattatgggatcaaaatgaaaacttgaaa 45437569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 234
Target Start/End: Original strand, 17702308 - 17702393
Alignment:
Q  149 tgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaatcaaataagcc 234  Q
    |||||||||||||| || ||| ||||| || ||||||||||||||||| | |||| || || ||| |||| | |||||| ||||||    
T  17702308 tgagggaccaaaacataggttttattagttatgggaccaaaatgaaaattggaaattaattaagggaccaataaatcaagtaagcc 17702393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 250 - 302
Target Start/End: Complemental strand, 9840156 - 9840104
Alignment:
Q  250 tatttgaagttttttaagtttttaagtatcaaataggtctttaaaaggttaac 302  Q
    |||||||||||||| ||  ||| |||| |||||||||||||||||||| ||||    
T  9840156 tatttgaagtttttaaaaatttgaagtttcaaataggtctttaaaaggataac 9840104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 16338648 - 16338700
Alignment:
Q  235 ttaatttaatgcacttatttgaagttttttaagtttttaagtatcaaataggt 287  Q
    |||||||||||||| ||||||| | ||||| || |||||||| ||||||||||    
T  16338648 ttaatttaatgcacatatttgacgctttttgagcttttaagtttcaaataggt 16338700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 122 - 218
Target Start/End: Original strand, 38697012 - 38697108
Alignment:
Q  122 gatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaacca 218  Q
    |||||||||| |  ||||||| |||| ||| ||| |||||| |  ||| ||||| || ||||||||||||||||||| |||| || |||||| ||||    
T  38697012 gatttatttgaccgacggaggcaaatgtgaaggatcaaaacatgagttttattagttatgggaccaaaatgaaaactggaaattaattgagggacca 38697108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 43202302 - 43202234
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccataga 93  Q
    ||||| ||||||||| |||  | ||||| ||| |||| ||||||||||||||||||| ||||| |||||    
T  43202302 caaacagtttaaatttaaataactaataggatctatggtggaccactcttaaggttgatccactataga 43202234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 123; Significance: 6e-63; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 25 - 235
Target Start/End: Original strand, 38242425 - 38242635
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggat 124  Q
    |||||||||||||||||||  |||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||  ||||    
T  38242425 caaacggtttaaattaaaataattaatagaatttatggtggaccactcttaaggttggtccaccatagacatcatttgagttaaacttaactgtgaggat 38242524  T
Q  125 ttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaat 224  Q
    ||||||||||||| ||  ||||  ||||||||||||| ||| ||| |||||||||||||| |||||||||||||||||| ||||||||| ||| ||||||    
T  38242525 ttatttggcaaacagataaaaaagtgagggaccaaaaggtacgttttattaattgtgggatcaaaatgaaaacttgaaattatttgagggacctttgaat 38242624  T
Q  225 caaataagcct 235  Q
    |||||||||||    
T  38242625 caaataagcct 38242635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 35 - 235
Target Start/End: Complemental strand, 40244381 - 40244184
Alignment:
Q  35 aaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctggatttatttggc 133  Q
    ||||||| || ||||||||| | || ||||||||||| ||||| |||||||||||||||||    ||| | |||||||||||||||   ||| |||||||    
T  40244381 aaattaacaaaattaataaggtctacgatggaccacttttaagtttggtccaccatagacac---ttgaagttaaagttaactgtcaaaatt-atttggc 40244286  T
Q  134 aaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaatcaaataagc 233  Q
    |||||||||||||| ||||||||||||| ||| ||| ||||||||||| ||||||||||||||||||||| ||||| ||| |||| || |||||||||||    
T  40244285 aaacggaggaaaatttgagggaccaaaatgtacgttttattaattgtgagaccaaaatgaaaacttgaaattatttaagggaccaatggatcaaataagc 40244186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 105 - 235
Target Start/End: Complemental strand, 18197274 - 18197144
Alignment:
Q  105 ttaaagttaactgtctggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaa 204  Q
    ||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||| ||| ||| |||||||||||||||||||||||||| ||||||     
T  18197274 ttaaagttaacggtctggatttatttggcaaacggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggaccaaaatgaaaatttgaaat 18197175  T
Q  205 tatttgaggaaccattgaatcaaataagcct 235  Q
    ||||||||| ||  ||| |||||||||||||    
T  18197174 tatttgagggacatttggatcaaataagcct 18197144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 27 - 234
Target Start/End: Complemental strand, 34818289 - 34818084
Alignment:
Q  27 aacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggattt 126  Q
    ||||||| ||||||| || ||||||||| | |||||| || || | ||||||||| || |||||||||||  ||    |||||||||||| |  ||||||    
T  34818289 aacggttaaaattaacaaaattaataaggtctatgatagatcatttttaaggttgatcaaccatagacat--ttaaagttaaagttaactattgggattt 34818192  T
Q  127 atttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaat-atttgaggaaccattgaatc 225  Q
    |||||||||| ||||||||||||||||||||||| | || ||| ||||||||||||||||||||||||||||||||| | ||| |||| |||||||||||    
T  34818191 atttggcaaatggaggaaaatctgagggaccaaatcatacgttttattaattgtgggaccaaaatgaaaacttgaaattaattagagg-accattgaatc 34818093  T
Q  226 aaataagcc 234  Q
    |||||||||    
T  34818092 aaataagcc 34818084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 25 - 196
Target Start/End: Complemental strand, 3208691 - 3208520
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcattt-ggattaaagttaactgtctgga 123  Q
    |||||||||||||||| ||  ||||||| |||||||| ||||||||||||||||||||||||||||| | ||||||| || ||||| ||||| ||  |||    
T  3208691 caaacggtttaaattataataattaataggatttatggtggaccactcttaaggttggtccaccata-atatcatttggggttaaacttaacggtaagga 3208593  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaa 196  Q
    |||||||| ||||||||||||||  | ||||| ||||||||| ||| |||||||| |||||||||||||||||    
T  3208592 tttatttgacaaacggaggaaaaaataagggatcaaaacgtacgttttattaattatgggaccaaaatgaaaa 3208520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 25 - 197
Target Start/End: Original strand, 10732038 - 10732210
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggat 124  Q
    ||||||||  |||||||||  ||||||| ||| |||| |||||| |||| ||||||||||||||||||||||||||||| ||||| ||||| ||| | ||    
T  10732038 caaacggtcgaaattaaaataattaataggatctatggtggaccgctctaaaggttggtccaccatagacatcatttgggttaaacttaaccgtcggaat 10732137  T
Q  125 ttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaac 197  Q
    |||||||| |||||||||||||| |||||||| ||||||    || |||||||| ||||||||||||||||||    
T  10732138 ttatttggtaaacggaggaaaatgtgagggactaaaacgccatttttattaattatgggaccaaaatgaaaac 10732210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 25 - 234
Target Start/End: Original strand, 12107889 - 12108101
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctgga 123  Q
    ||||||||||| |||||||| |  |||| | | |||| ||||||||| ||||||||||||||||||| | |||||||||  ||||| |||||   |  ||    
T  12107889 caaacggtttatattaaaaaaaa-aatagggtctatggtggaccacttttaaggttggtccaccataaatatcatttggggttaaatttaacacccgtga 12107987  T
Q  124 tttat---ttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccatt 220  Q
    |||||   ||||||||||||||||||  |||||||||||||  |||||| ||||| ||||||||||||||||||||||||||| ||||| ||| || |||    
T  12107988 tttattatttggcaaacggaggaaaaagtgagggaccaaaatatatgttttattagttgtgggaccaaaatgaaaacttgaaattatttaagggactatt 12108087  T
Q  221 gaatcaaataagcc 234  Q
    ||||||||||||||    
T  12108088 gaatcaaataagcc 12108101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 30 - 235
Target Start/End: Complemental strand, 38241105 - 38240903
Alignment:
Q  30 ggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctggatttat 128  Q
    |||| ||||||| || ||||||||| | || ||||||||| | ||||| ||||| ||||||||||||   ||||| ||||| ||||| | | ||||||||    
T  38241105 ggttaaaattaacaaaattaataagctctacgatggaccatttttaag-ttggttcaccatagacat---ttggagttaaacttaacagccgggatttat 38241010  T
Q  129 ttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaatcaaa 228  Q
    ||||||||||||||||||||||| ||||  ||||||| ||| ||||||||||||||||||||| |||| |||||| ||||  ||| |||| || ||||||    
T  38241009 ttggcaaacggaggaaaatctgaaggacttaaacgtacgttttattaattgtgggaccaaaataaaaatttgaaattattcaagggaccaatggatcaaa 38240910  T
Q  229 taagcct 235  Q
    |||||||    
T  38240909 taagcct 38240903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 78 - 241
Target Start/End: Original strand, 53624325 - 53624486
Alignment:
Q  78 gttggtccaccatagacatcatttggattaaagttaactgtctggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaat 177  Q
    |||||||||||||| ||||  || || |||||  |||| ||||||||||||||||||||| ||| ||||  |||| |||||||| ||| ||| |||||||    
T  53624325 gttggtccaccatatacat--ttggggttaaacctaaccgtctggatttatttggcaaaccgagaaaaaagtgagtgaccaaaatgtacgttttattaat 53624422  T
Q  178 tgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaatcaaataagccttaattt 241  Q
    |||| || |||||||||||||||||| ||||||||| ||||||| |||||||||||||| ||||    
T  53624423 tgtgagatcaaaatgaaaacttgaaattatttgagggaccattggatcaaataagcctttattt 53624486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 65 - 194
Target Start/End: Complemental strand, 53622830 - 53622700
Alignment:
Q  65 gaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctggatttatttggcaaacggaggaaaatctgagggaccaaaacg 163  Q
    |||||||||||||||||||||||||||||||||||||||  ||||| ||||| ||  ||||||| ||||||||||||||||||||| ||||| |||||      
T  53622830 gaccactcttaaggttggtccaccatagacatcatttggggttaaacttaaccgttgggatttagttggcaaacggaggaaaatctaagggatcaaaata 53622731  T
Q  164 tatgttatattaattgtgggaccaaaatgaa 194  Q
    ||| || ||||||||||| ||||||||||||    
T  53622730 tattttttattaattgtgcgaccaaaatgaa 53622700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 27 - 197
Target Start/End: Original strand, 53614184 - 53614354
Alignment:
Q  27 aacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctggatt 125  Q
    ||||||| |||||||||  |||| || ||| |||| |||||||||||||||| || |||||||||||||| ||||||  ||||| ||||| | |||||||    
T  53614184 aacggttgaaattaaaataattactaggatctatggtggaccactcttaaggatgatccaccatagacattatttggggttaaacttaac-gcctggatt 53614282  T
Q  126 tatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaac 197  Q
    |||||||||||  ||||||||| |||||||| ||||||   ||| ||||||||||||||||||||| |||||    
T  53614283 tatttggcaaatagaggaaaatgtgagggactaaaacgccagttttattaattgtgggaccaaaataaaaac 53614354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 24 - 233
Target Start/End: Original strand, 34819193 - 34819401
Alignment:
Q  24 acaaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcattt-ggattaaagttaactgtctgg 122  Q
    |||||| |||||||||||||  | ||||| ||| |||| ||||||||||||||||||| ||||| ||||||||||||| || ||||| ||||| |   ||    
T  34819193 acaaacagtttaaattaaaataagtaataggatctatggtggaccactcttaaggttgatccactatagacatcatttggggttaaacttaacagcaagg 34819292  T
Q  123 atttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattga 222  Q
    |  |||||||||||| || |||||  ||| ||||  ||||||| ||| |||||||||| ||| |||||||||||||||||| ||||||||| || | ||     
T  34819293 a-ctatttggcaaacaga-gaaaaagtgaaggacttaaacgtacgttttattaattgtaggatcaaaatgaaaacttgaaattatttgagggactaatgg 34819390  T
Q  223 atcaaataagc 233  Q
    |||||||||||    
T  34819391 atcaaataagc 34819401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 25 - 209
Target Start/End: Complemental strand, 42685082 - 42684899
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtc-tgga 123  Q
    ||||||||||||||||||||  |||||||| |||||| ||||||||||||||| ||||| ||||||||||||  || || ||||| ||||| |||  |||    
T  42685082 caaacggtttaaattaaaaaatttaataaggtttatggtggaccactcttaagcttggttcaccatagacat--ttggggttaaacttaacagtcaagga 42684985  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatattt 209  Q
    ||||||||| ||||  || ||||  |||||||| |||||||  ||| |||| ||| ||| |||||||||||||||| ||| |||||    
T  42684984 tttatttggtaaacatagaaaaaaatgagggactaaaacgtcagttttattcattatggaaccaaaatgaaaacttaaaattattt 42684899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 35 - 203
Target Start/End: Complemental strand, 27838114 - 27837949
Alignment:
Q  35 aaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggatttatttggca 134  Q
    ||||||| || ||||||||| | || ||||||||||| ||||  |||||| |||||||||||   ||| | | |||||||| ||| ||||||||||||||    
T  27838114 aaattaacaaaattaataaggtctacgatggaccacttttaaaattggtctaccatagacat---ttgaagttaagttaacagtcaggatttatttggca 27838018  T
Q  135 aacggaggaaaatctgagggaccaaaacg-tatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    ||||||||||||  |||||||| ||||||  || || ||||||||||||||||||||||||||| |||||    
T  27838017 aacggaggaaaaggtgagggactaaaacgccatatt-tattaattgtgggaccaaaatgaaaacatgaaa 27837949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 50810822 - 50810953
Alignment:
Q  105 ttaaagttaactgtctg-gatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    ||||||||||| || || |||||||||||||||||||||||||  |||||||| ||||||| |||| |||||||| ||||||||||||||||| ||||||    
T  50810822 ttaaagttaacagtttgagatttatttggcaaacggaggaaaaaatgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaaattgaaa 50810921  T
Q  204 atatttgaggaaccattgaatcaaataagcct 235  Q
     ||||| ||| |||| || ||| | |||||||    
T  50810922 ttatttaagggaccaatggatctattaagcct 50810953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 105 - 235
Target Start/End: Complemental strand, 50865042 - 50864911
Alignment:
Q  105 ttaaagttaactgtctg-gatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    ||||||||||| || || |||||||||||||||||||||||||  |||||||| ||||||| |||| |||||||| ||||||||||||||||| ||||||    
T  50865042 ttaaagttaacagtttgagatttatttggcaaacggaggaaaaaatgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaaattgaaa 50864943  T
Q  204 atatttgaggaaccattgaatcaaataagcct 235  Q
     ||||| ||| |||| || ||| | |||||||    
T  50864942 ttatttaagggaccaatggatctattaagcct 50864911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 53194874 - 53194989
Alignment:
Q  120 tggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccat 219  Q
    |||||||||||||||||  ||||||||  ||||||||||||||||| ||| |||||||| |||||||||||||||||||||||| ||||  ||  | |||    
T  53194874 tggatttatttggcaaatagaggaaaaagtgagggaccaaaacgtacgttttattaattatgggaccaaaatgaaaacttgaaattattcaagagatcat 53194973  T
Q  220 tgaatcaaataagcct 235  Q
    ||||| ||||||||||    
T  53194974 tgaattaaataagcct 53194989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 35 - 197
Target Start/End: Complemental strand, 10731080 - 10730920
Alignment:
Q  35 aaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctggatttatttggc 133  Q
    ||||||| || ||||||||| | |||||| ||||||| ||||||||||| ||||||||||||   ||| | ||||||||||| ||| |||||||||||||    
T  10731080 aaattaacaaaattaataaggtatatgatagaccacttttaaggttggttcaccatagacat---ttgaagttaaagttaacagtcgggatttatttggc 10730984  T
Q  134 aaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaac 197  Q
    |||||||| ||||  ||| ||||||||| |    || |||||||| ||||||||||||||||||    
T  10730983 aaacggagaaaaaagtgaaggaccaaaatgccatttttattaattatgggaccaaaatgaaaac 10730920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 124 - 237
Target Start/End: Original strand, 37736089 - 37736202
Alignment:
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaa 223  Q
    |||||||||||||||||| ||||  |||||||| |||||||| ||| ||||||||||| ||||||||||||||| ||||| ||||| ||| || | ||||    
T  37736089 tttatttggcaaacggagaaaaaagtgagggactaaaacgtacgttttattaattgtgagaccaaaatgaaaacatgaaattatttaagggactaatgaa 37736188  T
Q  224 tcaaataagcctta 237  Q
    ||| ||||||||||    
T  37736189 tcacataagcctta 37736202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 35 - 231
Target Start/End: Original strand, 40745387 - 40745581
Alignment:
Q  35 aaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggatttatttggca 134  Q
    ||||||| || ||||||||| | || |||| |||||| ||||||||| | || |||| ||||  || | |||||||||||| |||  ||||||||| |||    
T  40745387 aaattaacaaaattaataaggtctacgatgaaccacttttaaggttgatacatcataaacat--ttggaattaaagttaacggtcaagatttattttgca 40745484  T
Q  135 aacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaatcaaataa 231  Q
    |||  |||||||||||||||| ||||||| | ||| ||| ||||||| ||||||||||||||||| ||| |||   |||||||| ||||| ||||||    
T  40745485 aacaaaggaaaatctgagggatcaaaacgaaagttttatcaattgtgagaccaaaatgaaaacttaaaattatccaaggaaccaatgaattaaataa 40745581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 25 - 196
Target Start/End: Complemental strand, 26886479 - 26886308
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttg-gattaaagttaactgtctgga 123  Q
    |||||||||||||||||||  ||||||| |||||||| ||||||||||||||||||||| |||| || |||||||||| | || || ||||| ||| |||    
T  26886479 caaacggtttaaattaaaataattaataggatttatggtggaccactcttaaggttggttcaccgtaaacatcatttgaggttgaaattaacagtc-gga 26886381  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaa 196  Q
    |||||||||||||| |||  |||  ||||||| ||||||     || ||||||||||  ||||||||||||||    
T  26886380 tttatttggcaaacagagacaaacgtgagggatcaaaacaccatttttattaattgttagaccaaaatgaaaa 26886308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 122 - 218
Target Start/End: Complemental strand, 50809531 - 50809435
Alignment:
Q  122 gatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaacca 218  Q
    |||||||||||||||||||||||||  |||||||| ||||||| |||| |||||||| ||||||||||||||||| |||||| ||||| ||| ||||    
T  50809531 gatttatttggcaaacggaggaaaaagtgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaaattgaaattatttaagggacca 50809435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 122 - 218
Target Start/End: Original strand, 50866331 - 50866427
Alignment:
Q  122 gatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaacca 218  Q
    |||||||||||||||||||||||||  |||||||| ||||||| |||| |||||||| ||||||||||||||||| |||||| ||||| ||| ||||    
T  50866331 gatttatttggcaaacggaggaaaaagtgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaaattgaaattatttaagggacca 50866427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 121 - 237
Target Start/End: Original strand, 53421766 - 53421882
Alignment:
Q  121 ggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccatt 220  Q
    ||||||||||||||||| ||| ||||  ||||||||||||||||| ||| |||||||||| |||| ||||||||||| | ||| || ||  ||||| |||    
T  53421766 ggatttatttggcaaacagagaaaaaagtgagggaccaaaacgtacgttttattaattgtaggactaaaatgaaaacgtaaaattaattagggaacaatt 53421865  T
Q  221 gaatcaaataagcctta 237  Q
    |||||||||||||||||    
T  53421866 gaatcaaataagcctta 53421882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 122 - 209
Target Start/End: Original strand, 18458663 - 18458750
Alignment:
Q  122 gatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatattt 209  Q
    |||||||||||||||||||||||||  |||||||| |||||| | ||| ||||||||||||||||||||| ||||||||||| |||||    
T  18458663 gatttatttggcaaacggaggaaaaagtgagggactaaaacgcaagttttattaattgtgggaccaaaataaaaacttgaaattattt 18458750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 120 - 231
Target Start/End: Complemental strand, 41544774 - 41544663
Alignment:
Q  120 tggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccat 219  Q
    |||||||||||||||||| ||||||||  ||||||||  ||||||| |||||||||||| | |||||||||||||||||||||| ||||| | | ||||     
T  41544774 tggatttatttggcaaacagaggaaaaagtgagggacttaaacgtacgttatattaattataggaccaaaatgaaaacttgaaattatttaatggaccaa 41544675  T
Q  220 tgaatcaaataa 231  Q
    |||||| |||||    
T  41544674 tgaatctaataa 41544663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 25 - 196
Target Start/End: Complemental strand, 53420523 - 53420352
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtct--gg 122  Q
    ||||| ||||||||||||||  |||||||| | |||| |||| |||| |||| |||||||||||||||||||  ||  | ||||| ||||  | ||  ||    
T  53420523 caaacagtttaaattaaaaagtttaataaggtctatggtggatcacttttaaagttggtccaccatagacat--ttgtggttaaacttaatagactaggg 53420426  T
Q  123 atttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaa 196  Q
    |||||||||  |||||||| ||||  ||||||||||||||||| ||| |||||||||| |||||||||||||||    
T  53420425 atttatttgataaacggagaaaaaagtgagggaccaaaacgtacgttttattaattgtaggaccaaaatgaaaa 53420352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 121 - 235
Target Start/End: Complemental strand, 40364430 - 40364316
Alignment:
Q  121 ggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccatt 220  Q
    ||||||||||||||||||||| ||||  ||||||||  |||||||  || |||||||| | |||||||||||||||||||||| |||||  |||||||||    
T  40364430 ggatttatttggcaaacggagaaaaaaatgagggacttaaacgtacattttattaattttaggaccaaaatgaaaacttgaaattatttagggaaccatt 40364331  T
Q  221 gaatcaaataagcct 235  Q
      |||||||||||||    
T  40364330 agatcaaataagcct 40364316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 25 - 203
Target Start/End: Original strand, 41264562 - 41264740
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggat 124  Q
    ||||||||  |||||||||  ||||||| ||| |||| || ||||||||||| | || ||||||||| |||||||||  |||||| ||||| ||   |||    
T  41264562 caaacggtcgaaattaaaataattaataggatctatggtgtaccactcttaaagatgatccaccataaacatcatttttattaaacttaacggttgagat 41264661  T
Q  125 ttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    ||||||||||||||||| ||||  ||||||| |||||||    || |||||| |||| ||||||||||||||| |||||    
T  41264662 ttatttggcaaacggagaaaaaggtgagggatcaaaacgccatttttattaaatgtgagaccaaaatgaaaacatgaaa 41264740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 203
Target Start/End: Original strand, 35372075 - 35372245
Alignment:
Q  30 ggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggatttatt 129  Q
    |||| ||||||| || ||||||||| | || ||||||||||| ||||  |||||||| |||||||||   ||| | | |||||||| ||  |||||||||    
T  35372075 ggttaaaattaacaaaattaataaggtctacgatggaccacttttaaaattggtccaacatagacat---ttgaagttaagttaacagtaaggatttatt 35372171  T
Q  130 tggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    |||||||| ||||||||  |||||||| ||||||    || ||||||||||| ||||||||||||||| |||||    
T  35372172 tggcaaacagaggaaaaggtgagggactaaaacgccatttttattaattgtgagaccaaaatgaaaacatgaaa 35372245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 25 - 189
Target Start/End: Original strand, 27841619 - 27841783
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggat 124  Q
    ||||| ||| |||||||||  |||| || ||| |||| ||||||||||||||||||||||||||||| |||| |||| ||||||| |||||  || | ||    
T  27841619 caaacagttaaaattaaaataattattaggatctatggtggaccactcttaaggttggtccaccataaacataatttagattaaacttaaccatcggaat 27841718  T
Q  125 ttatttggcaaacggaggaaaatctgagggaccaaaacg-tatgttatattaattgtgggaccaaa 189  Q
    ||||||| |||||| | |||||  ||| |||| |||| | ||| || |||||||||||||||||||    
T  27841719 ttatttgacaaacgaaagaaaaggtgaaggactaaaaagctat-ttttattaattgtgggaccaaa 27841783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 35 - 203
Target Start/End: Complemental strand, 35371104 - 35370942
Alignment:
Q  35 aaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggatttatttggca 134  Q
    |||||||||  ||||||| ||| |||| ||||||||||||||||||||||||||||| |||||||||||  |||| ||||| |||      |||||| ||    
T  35371104 aaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccataaacatcatttgggctaaacttaaccgtc------tatttgaca 35371011  T
Q  135 aacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    ||| ||||||||  ||| |||| |||||     || |||||||||||||| |||||||||||| |||||    
T  35371010 aacagaggaaaaggtgaaggactaaaacaccatttttattaattgtgggatcaaaatgaaaacatgaaa 35370942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 171 - 235
Target Start/End: Complemental strand, 12105351 - 12105287
Alignment:
Q  171 tattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaatcaaataagcct 235  Q
    ||||||||||||| |||| |||||||||||||| |||||||||||||||||||| ||||||||||    
T  12105351 tattaattgtggggccaatatgaaaacttgaaattatttgaggaaccattgaattaaataagcct 12105287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 46 - 203
Target Start/End: Original strand, 3455555 - 3455712
Alignment:
Q  46 attaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgga---ttaaagttaactgtctggatttatttggcaaacggagg 142  Q
    ||||||| ||| |||| ||||||||||||||||||||||||||||| ||||  |||||    ||||||||||||||| ||||||||||| |  ||||||     
T  3455555 attaatatgatctatggtggaccactcttaaggttggtccaccata-acat--tttggggggttaaagttaactgtcaggatttatttgactgacggaga 3455651  T
Q  143 aaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
     |||  ||| |||||||||| |  ||| ||||| || || |||||||||||||||||||||    
T  3455652 caaacatgaaggaccaaaacatgagttttattagttatgagaccaaaatgaaaacttgaaa 3455712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 122 - 236
Target Start/End: Original strand, 36176512 - 36176627
Alignment:
Q  122 gatttatttggcaaacggaggaaaatc-tgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccatt 220  Q
    |||||||||||||||| ||||||||   |||||||||||||| ||  || ||||||||||||||||||||||||||| ||||| || |   || ||||||    
T  36176512 gatttatttggcaaacagaggaaaaaaatgagggaccaaaacatacattttattaattgtgggaccaaaatgaaaacatgaaattaatcaggggaccatt 36176611  T
Q  221 gaatcaaataagcctt 236  Q
    | ||||||||||||||    
T  36176612 ggatcaaataagcctt 36176627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 3209981 - 3210050
Alignment:
Q  166 tgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaatcaaataagcct 235  Q
    |||| |||||||||||||||||||||||||| || ||| ||||| ||| |||||||||||||||||||||    
T  3209981 tgttttattaattgtgggaccaaaatgaaaatttaaaattatttaagggaccattgaatcaaataagcct 3210050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 37735416 - 37735303
Alignment:
Q  122 gatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattg 221  Q
    |||||||||| |||||| || ||||  |||||||| ||||| || ||| |||||||| |||||||||||||||||||| ||| ||||| | | |||| ||    
T  37735416 gatttatttgacaaacgaagaaaaaaatgagggactaaaacatacgttttattaattatgggaccaaaatgaaaacttaaaattatttaaaggaccaatg 37735317  T
Q  222 aatcaaataagcct 235  Q
     |||||||||||||    
T  37735316 gatcaaataagcct 37735303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 53612998 - 53612906
Alignment:
Q  105 ttaaagttaactgtctggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaac 197  Q
    ||||||||||| ||| ||||||||||||||||| ||||||||| |||||||  ||||||    || |||||||| ||||||||||||||||||    
T  53612998 ttaaagttaacggtcgggatttatttggcaaacagaggaaaatgtgagggaataaaacgccatttttattaattatgggaccaaaatgaaaac 53612906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 121 - 236
Target Start/End: Complemental strand, 53187669 - 53187555
Alignment:
Q  121 ggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccatt 220  Q
    |||||||||||||||||||| |||||  |||||||||||| | ||  || ||||||||||  || |||||||||||||||||| |||||  || ||||||    
T  53187669 ggatttatttggcaaacggaagaaaaagtgagggaccaaa-catacattttattaattgtaagatcaaaatgaaaacttgaaattatttaggggaccatt 53187571  T
Q  221 gaatcaaataagcctt 236  Q
      ||||||||||||||    
T  53187570 cgatcaaataagcctt 53187555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 78 - 209
Target Start/End: Complemental strand, 18442401 - 18442275
Alignment:
Q  78 gttggtccaccatagacatcatttggattaaagttaactgtctggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaat 177  Q
    |||||||||||||||||||  || || ||||| |||||    || |||||||||||||   ||||||||  ||| |||| |||||||  ||| |||||||    
T  18442401 gttggtccaccatagacat--ttggggttaaacttaacaacatgaatttatttggcaa---gaggaaaaaatgatggactaaaacgtgggttttattaat 18442307  T
Q  178 tgtgggaccaaaatgaaaacttgaaaatattt 209  Q
    |||||||||||||||||||||||||| |||||    
T  18442306 tgtgggaccaaaatgaaaacttgaaattattt 18442275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 78 - 209
Target Start/End: Complemental strand, 19487475 - 19487349
Alignment:
Q  78 gttggtccaccatagacatcatttggattaaagttaactgtctggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaat 177  Q
    |||||||||||||||||||  || || ||||| |||||    || |||||||||||||   ||||||||  ||| |||| |||||||  ||| |||||||    
T  19487475 gttggtccaccatagacat--ttggggttaaacttaacaacatgaatttatttggcaa---gaggaaaaaatgatggactaaaacgtgggttttattaat 19487381  T
Q  178 tgtgggaccaaaatgaaaacttgaaaatattt 209  Q
    |||||||||||||||||||||||||| |||||    
T  19487380 tgtgggaccaaaatgaaaacttgaaattattt 19487349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 235 - 315
Target Start/End: Original strand, 34073094 - 34073174
Alignment:
Q  235 ttaatttaatgcacttatttgaagttttttaagtttttaagtatcaaataggtctttaaaaggttaacaaagacctatttg 315  Q
    ||||||||||| |  ||||||||||||||||||||||||||| |||||||| || |||||||| ||| || ||||| ||||    
T  34073094 ttaatttaatgtatctatttgaagttttttaagtttttaagtttcaaatagatccttaaaagggtaataaggacctctttg 34073174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 30 - 178
Target Start/End: Complemental strand, 36175463 - 36175317
Alignment:
Q  30 ggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggatttatt 129  Q
    ||||||||||||| | ||||||| ||| |||| ||||| |    ||| |||| |||| |||||||||  || || ||||| ||||| ||| |||||||||    
T  36175463 ggtttaaattaaagaaattaataggatatatggtggactatatataatgttgatccatcatagacat--ttggggttaaacttaacagtccggatttatt 36175366  T
Q  130 tggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaatt 178  Q
    |||||||||||| ||||  ||||| ||||||||||| |||  |||||||    
T  36175365 tggcaaacggagaaaaaaatgaggcaccaaaacgtacgtttcattaatt 36175317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 10301140 - 10301072
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccataga 93  Q
    ||||| |||||||||||||  ||||||| ||| |||| |||| |||||||||||||||| |||||||||    
T  10301140 caaacagtttaaattaaaataattaataggatctatggtggatcactcttaaggttggttcaccataga 10301072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 14745110 - 14745174
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccacca 89  Q
    ||||| |||||||||||||  ||||||| ||| |||| || ||||||||||||||||||||||||    
T  14745110 caaacagtttaaattaaaataattaataggatctatggtgaaccactcttaaggttggtccacca 14745174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 48083428 - 48083362
Alignment:
Q  30 ggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacat 96  Q
    ||||||||||||||  ||||||| ||| |||| | |||||||||||||||| || ||||||||||||    
T  48083428 ggtttaaattaaaataattaataggatctatggtagaccactcttaaggttagtgcaccatagacat 48083362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 122 - 231
Target Start/End: Original strand, 23443463 - 23443572
Alignment:
Q  122 gatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattg 221  Q
    |||||||||||||||| || |||||  ||| ||||  ||| ||| ||| |||||||| ||||||||||||||||| || ||| || || ||| | |||||    
T  23443463 gatttatttggcaaacagaagaaaagatgaaggacttaaaggtacgttttattaattttgggaccaaaatgaaaagttaaaattaattaagggatcattg 23443562  T
Q  222 aatcaaataa 231  Q
     |||||||||    
T  23443563 gatcaaataa 23443572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 235 - 296
Target Start/End: Complemental strand, 36961212 - 36961152
Alignment:
Q  235 ttaatttaatgcacttatttgaagttttttaagtttttaagtatcaaataggtctttaaaag 296  Q
    ||||||||| |||| |||||||||||||||||||||||| || || |||||||| |||||||    
T  36961212 ttaatttaacgcacctatttgaagttttttaagtttttatgtttc-aataggtccttaaaag 36961152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 10338944 - 10338872
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatc 97  Q
    ||||| ||| |||||||||  ||||||| ||| |||| ||||||||||||||||||||| ||  |||||||||    
T  10338944 caaacagttaaaattaaaataattaataggatctatggtggaccactcttaaggttggttcattatagacatc 10338872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 203
Target Start/End: Complemental strand, 24403440 - 24403268
Alignment:
Q  30 ggtttaaattaaaaatattaataagatttatgatggaccactct-taaggttggtccaccatagacatcatttggattaaagttaactgtc-tggattta 127  Q
    |||| ||||| |||| ||||||||| |||||| ||||| | ||| ||| ||| || ||||||||||||  || || |||||||||||   | ||||||||    
T  24403440 ggttaaaattgaaaaaattaataaggtttatggtggacta-tctataatgttagttcaccatagacat--ttagggttaaagttaacaaacatggattta 24403344  T
Q  128 tttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
     ||| ||||||||||  ||  |||||||||||||| ||  || |||||||| || ||||| |||||||||||||||    
T  24403343 cttgacaaacggaggtgaacttgagggaccaaaacataaattttattaattatgagaccataatgaaaacttgaaa 24403268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 3209877 - 3209948
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacat 96  Q
    |||| |||| ||||||| || ||||||||| |||| ||||||| | | ||||||||||||||||||| ||||    
T  3209877 caaatggttaaaattaacaaaattaataaggtttacgatggactatttttaaggttggtccaccatatacat 3209948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 235 - 270
Target Start/End: Original strand, 49559432 - 49559467
Alignment:
Q  235 ttaatttaatgcacttatttgaagttttttaagttt 270  Q
    |||||||||||||| |||||||||||||||||||||    
T  49559432 ttaatttaatgcacatatttgaagttttttaagttt 49559467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 11224776 - 11224839
Alignment:
Q  49 aataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaa 114  Q
    |||| ||| |||| ||||||||||||||||||||||||||||  ||||  || |||||||||||||    
T  11224776 aatatgatctatggtggaccactcttaaggttggtccaccatgaacat--ttgggattaaagttaa 11224839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 198
Target Start/End: Original strand, 28909523 - 28909687
Alignment:
Q  31 gtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctg-gatttatt 129  Q
    |||||||||||||| ||||||| ||| |||| |||||||  ||||||  |||| ||||| ||| ||  || || ||||| ||||  ||| | ||||||||    
T  28909523 gtttaaattaaaaaaattaataggatctatggtggaccaaccttaagagtggttcaccacagatat--ttggggttaaacttaa--gtcagagatttatt 28909618  T
Q  130 tggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaact 198  Q
    || | |||||||  |||  |||||||||||||| |  ||| ||||| || |||||||||||||||||||    
T  28909619 tgaccaacggagacaaacgtgagggaccaaaacatgagttttattagttatgggaccaaaatgaaaact 28909687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 7270507 - 7270458
Alignment:
Q  47 ttaataagatttatgatggaccactcttaaggttggtccaccatagacat 96  Q
    |||||||||| |||| | ||||||||||||||||||||||| | ||||||    
T  7270507 ttaataagatctatggtagaccactcttaaggttggtccactacagacat 7270458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 191
Target Start/End: Complemental strand, 44182391 - 44182323
Alignment:
Q  123 atttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaat 191  Q
    ||||||||||||||| | ||||||  ||| |||| |||||||  ||| ||||||||||| |||||||||    
T  44182391 atttatttggcaaactgtggaaaaagtgaaggactaaaacgtgagttttattaattgtgagaccaaaat 44182323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 122; Significance: 3e-62; HSPs: 74)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 25 - 234
Target Start/End: Complemental strand, 52240084 - 52239875
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggat 124  Q
    |||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||  |  | ||    
T  52240084 caaacggtttaaattaaaaatattaataggatctatggtggaccactcttaaggttggtccaccatagacatcatttgggttaaagttaacccttggaat 52239985  T
Q  125 ttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaat 224  Q
    ||||||||||||||||| |||| |||| | ||||||||||| ||| |||||||||||||| |||||| |||| |||||| ||||||||| ||||||  ||    
T  52239984 ttatttggcaaacggagaaaaacctgaagaaccaaaacgtacgttttattaattgtgggatcaaaataaaaatttgaaattatttgagggaccattagat 52239885  T
Q  225 caaataagcc 234  Q
    ||||||||||    
T  52239884 caaataagcc 52239875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 25 - 234
Target Start/End: Complemental strand, 1794619 - 1794409
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgg-attaaagttaactgtctgga 123  Q
    ||||||||||||||||||||  |||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| ||  |||    
T  1794619 caaacggtttaaattaaaaaatttaataaggtctatggtggaccactcttaaggttggtccaccatatacatcatttgggattaaacttaaccgttagga 1794520  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaa 223  Q
    |||||||| ||||| ||||||||  ||||||| ||||| |||| || ||||||||||| || |||||||||||||||||| ||||||||| |||||||||    
T  1794519 tttatttgacaaacagaggaaaaagtgagggatcaaaaggtatattttattaattgtgagatcaaaatgaaaacttgaaattatttgagggaccattgaa 1794420  T
Q  224 tcaaataagcc 234  Q
    |||||||||||    
T  1794419 tcaaataagcc 1794409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 30 - 235
Target Start/End: Complemental strand, 11968713 - 11968508
Alignment:
Q  30 ggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggatttatt 129  Q
    ||||||||||||||  ||||||| ||| ||||||||||||||||||||||||||||| ||||||||| || ||  |||||||| || | | | |||||||    
T  11968713 ggtttaaattaaaataattaataggatctatgatggaccactcttaaggttggtccatcatagacataatctgagttaaagttgacagccggaatttatt 11968614  T
Q  130 tggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaatcaaat 229  Q
    |  ||||||||| ||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||   |||||||    
T  11968613 ttacaaacggagcaaaatctgagggaccaaaaagtatgttttattaattgtgagaccaaaatgaaaacttgaaattatttgaggaaccataagatcaaat 11968514  T
Q  230 aagcct 235  Q
    ||||||    
T  11968513 aagcct 11968508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 25 - 237
Target Start/End: Original strand, 2312390 - 2312603
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctgga 123  Q
    ||||| |||||||||||||  ||||||| ||| |||| ||||||||| ||||| |||||||||||||||||||||||||  ||||| ||||| |||  ||    
T  2312390 caaacagtttaaattaaaataattaataggatctatggtggaccacttttaagattggtccaccatagacatcatttggggttaaacttaacggtcatga 2312489  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaa 223  Q
    |||||||||||||||||||||||  ||||||||  ||||||| ||| ||||||||||||||| |||||| |||||||||| ||| | ||| |||| || |    
T  2312490 tttatttggcaaacggaggaaaaagtgagggacttaaacgtacgttttattaattgtgggactaaaatggaaacttgaaattatctaagggaccaatgga 2312589  T
Q  224 tcaaataagcctta 237  Q
    ||||||||||||||    
T  2312590 tcaaataagcctta 2312603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 25 - 231
Target Start/End: Original strand, 27850847 - 27851047
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttg-gattaaagttaactgtctgga 123  Q
    |||||||||||||||||||  ||||||| ||| |||| ||||||||| |||||||||||||||||||||||||||||| | ||||| ||||||||  |||    
T  27850847 caaacggtttaaattaaaataattaataggatctatggtggaccacttttaaggttggtccaccatagacatcatttgaggttaaacttaactgttggga 27850946  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaa 223  Q
    |||||       |||||||||||  |||||||||||||  || ||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||| |    
T  27850947 tttat-------acggaggaaaaattgagggaccaaaatatacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggaccattgga 27851039  T
Q  224 tcaaataa 231  Q
    ||||||||    
T  27851040 tcaaataa 27851047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 58 - 230
Target Start/End: Original strand, 6349494 - 6349667
Alignment:
Q  58 tatgatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctggatttatttggcaaacggaggaaaatctgagggac 156  Q
    |||| ||||||||||||||||||| ||||||||| |||||||||||  ||||| |||||  || |||| ||||||| ||||||| |||||  ||||||||    
T  6349494 tatggtggaccactcttaaggttgatccaccatatacatcatttggggttaaacttaacgttcgggatctatttggtaaacggaagaaaaggtgagggac 6349593  T
Q  157 caaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaatcaaata 230  Q
    ||||| ||| ||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  6349594 caaaaggtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggaccattgaatcaaata 6349667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 25 - 235
Target Start/End: Complemental strand, 6348360 - 6348152
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggat 124  Q
    |||| |||| |||||| ||||||||||||| | || | ||||||||||||||||||||||||||||||||||  ||  | ||||| |||||  || | ||    
T  6348360 caaagggttaaaattagaaatattaataaggtctacggtggaccactcttaaggttggtccaccatagacat--ttgaggttaaacttaaccatcagaat 6348263  T
Q  125 ttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaat 224  Q
    ||||||| ||||| ||||||||  ||||| ||||||| ||| ||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||  ||    
T  6348262 ttatttgacaaacagaggaaaaagtgaggaaccaaaaggtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggaccatttgat 6348163  T
Q  225 caaataagcct 235  Q
    |||||||||||    
T  6348162 caaataagcct 6348152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 25 - 203
Target Start/End: Complemental strand, 7707796 - 7707617
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctgga 123  Q
    ||||||||| |||||||||  ||||||| ||| |||| |||||||||||||||||||||| |||| |||||||||||||  |||||| |||| ||| |||    
T  7707796 caaacggttgaaattaaaataattaataggatctatggtggaccactcttaaggttggtctaccaaagacatcatttggtgttaaagctaaccgtcagga 7707697  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    |||||||||||||| ||||||||| ||| |||| |||||||   || ||||||||||||||||||||||||||| |||||    
T  7707696 tttatttggcaaacagaggaaaatgtgatggactaaaacgtcatttttattaattgtgggaccaaaatgaaaacatgaaa 7707617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 25 - 236
Target Start/End: Original strand, 15449984 - 15450195
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctgga 123  Q
    ||||| |||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||| ||||||| |||||||| ||||| ||||| ||   ||    
T  15449984 caaacagtttaaattaaaaatattaataggatctatggtggaccactcttaaggttggtccacgatagacaacatttggagttaaacttaaccgt-aaga 15450082  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaa 223  Q
    |||||||||||||||||||||||  | || |||  ||||||| ||| |||||| |  |||| || ||||||||| ||||| ||||| ||| |||| ||||    
T  15450083 tttatttggcaaacggaggaaaaggtaagcgacttaaacgtacgttttattaactaagggatcataatgaaaacctgaaattatttaagggaccaatgaa 15450182  T
Q  224 tcaaataagcctt 236  Q
    |||||||||||||    
T  15450183 tcaaataagcctt 15450195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 105 - 235
Target Start/End: Complemental strand, 2311050 - 2310920
Alignment:
Q  105 ttaaagttaactgtctggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaa 204  Q
    ||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||     
T  2311050 ttaaagttaactgttaggatttatttggcaatcggaggaaaatctgagggaccaaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaat 2310951  T
Q  205 t-atttgaggaaccattgaatcaaataagcct 235  Q
    | ||| |||| ||||||| |||||||||||||    
T  2310950 taattagagg-accattggatcaaataagcct 2310920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 27 - 232
Target Start/End: Original strand, 42810115 - 42810319
Alignment:
Q  27 aacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggattt 126  Q
    ||||||||||||||||||  |||||||| | |||| ||||| ||||||||| ||||| ||||||||||||| |  || ||||| |||||     ||||||    
T  42810115 aacggtttaaattaaaaaatttaataaggtctatggtggactactcttaagattggttcaccatagacatc-tgggggttaaacttaacaccaaggattt 42810213  T
Q  127 atttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaatca 226  Q
    ||||||||||||||||||||| ||||||||  ||| ||| ||| |||||||||||||||||||||||||| |||||| ||||| ||| || |||| ||||    
T  42810214 atttggcaaacggaggaaaatgtgagggacttaaaagtacgttttattaattgtgggaccaaaatgaaaagttgaaattatttaagggactattggatca 42810313  T
Q  227 aataag 232  Q
    ||||||    
T  42810314 aataag 42810319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 108 - 235
Target Start/End: Complemental strand, 4129117 - 4128990
Alignment:
Q  108 aagttaactgtctggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatat 207  Q
    |||||||| ||| ||||||||||||||||||||| ||||  | ||||||||||| |||  || ||||||||||||||||||||||||||||||||| |||    
T  4129117 aagttaacggtcgggatttatttggcaaacggagaaaaaagtaagggaccaaaatgtacattttattaattgtgggaccaaaatgaaaacttgaaattat 4129018  T
Q  208 ttgaggaaccattgaatcaaataagcct 235  Q
    |||||||||||||| |||||||||||||    
T  4129017 ttgaggaaccattggatcaaataagcct 4128990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 35 - 235
Target Start/End: Complemental strand, 40792944 - 40792748
Alignment:
Q  35 aaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggatttatttggca 134  Q
    ||||||| || ||||||||| | ||  || ||||||| ||||||||||||||| ||||||||  ||    ||||||||||||  | ||||||||||||||    
T  40792944 aaattaagaaaattaataaggtctaccatagaccacttttaaggttggtccactatagacat--ttaaagttaaagttaact--cgggatttatttggca 40792849  T
Q  135 aacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaat-atttgaggaaccattgaatcaaataagc 233  Q
    ||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||| | ||| |||| |||||| ||||||||||||    
T  40792848 aacggagaaaaatctgagggaccaaaatgtatgttttattaattgtgggaccaaaatgaaaacttaaaattaattagagg-accattaaatcaaataagc 40792750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 46 - 234
Target Start/End: Original strand, 393569 - 393756
Alignment:
Q  46 attaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctgg-atttatttggcaaacggaggaa 144  Q
    ||||||||| | || ||||||||||| ||||||||||||||| ||| ||||  || | |||||||||||| ||| || ||||||||||||||||||| ||    
T  393569 attaataaggtctacgatggaccacttttaaggttggtccactataaacat--ttagaattaaagttaacagtccgggatttatttggcaaacggagaaa 393666  T
Q  145 aatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaatcaaataagcc 234  Q
    ||  |||||||||||||  ||  || |||||||||||||||||||||||||| |||||| ||||||||| ||| ||| ||||||||||||    
T  393667 aaagtgagggaccaaaagatactttttattaattgtgggaccaaaatgaaaatttgaaattatttgagggaccgttggatcaaataagcc 393756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 37882944 - 37882831
Alignment:
Q  122 gatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattg 221  Q
    |||||||||||||||||||||||||  ||||||||||||| ||| ||| ||||||||||||||| ||||||||||||||||| ||||||||| ||||||     
T  37882944 gatttatttggcaaacggaggaaaaggtgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaacttgaaattatttgagggaccatta 37882845  T
Q  222 aatcaaataagcct 235  Q
    ||||||||||||||    
T  37882844 aatcaaataagcct 37882831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 107 - 234
Target Start/End: Complemental strand, 1188968 - 1188841
Alignment:
Q  107 aaagttaactgtctggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaata 206  Q
    |||||||||  || ||||||||||||||||||||||||||  ||||||||||||| ||| ||| ||||||||||||||||||||| ||||||||||| ||    
T  1188968 aaagttaacgttcgggatttatttggcaaacggaggaaaaagtgagggaccaaaatgtacgttttattaattgtgggaccaaaataaaaacttgaaatta 1188869  T
Q  207 tttgaggaaccattgaatcaaataagcc 234  Q
    ||||||| || |||| ||||||||||||    
T  1188868 tttgagggactattggatcaaataagcc 1188841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 123 - 235
Target Start/End: Complemental strand, 24426448 - 24426336
Alignment:
Q  123 atttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattga 222  Q
    |||| |||||||||||||||||||  ||||||||||||| ||| ||| ||||||||||| ||||||||||||||||||||| ||||||||| |||||||     
T  24426448 atttttttggcaaacggaggaaaaagtgagggaccaaaaggtacgttttattaattgtgagaccaaaatgaaaacttgaaattatttgagggaccattgg 24426349  T
Q  223 atcaaataagcct 235  Q
    |||||||||||||    
T  24426348 atcaaataagcct 24426336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 107 - 234
Target Start/End: Original strand, 44503670 - 44503796
Alignment:
Q  107 aaagttaactgtctggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaata 206  Q
    ||||||||| ||| ||||||||||||||||| ||||||||  ||||||||||||| ||| ||| ||||||||||| ||||||||| ||||||||||| ||    
T  44503670 aaagttaacggtcgggatttatttggcaaacagaggaaaaagtgagggaccaaaatgtacgtt-tattaattgtgagaccaaaataaaaacttgaaatta 44503768  T
Q  207 tttgaggaaccattgaatcaaataagcc 234  Q
    ||||||| || |||||||||||||||||    
T  44503769 tttgagggactattgaatcaaataagcc 44503796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 37 - 233
Target Start/End: Complemental strand, 1829947 - 1829752
Alignment:
Q  37 attaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaa-gttaactgtctggatttatttggcaa 135  Q
    ||||| || ||||||||| | || ||||||||||| |||| |||||||||| ||||||||  || |  ||||| |||||| ||| | ||||||||| |||    
T  1829947 attaataaaattaataaggtctacgatggaccacttttaaagttggtccacgatagacat--ttagagttaaaagttaacagtcggaatttatttgacaa 1829850  T
Q  136 acggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaatcaaataagc 233  Q
    ||| |||||||  |||||||| ||||  || ||| ||||||||||||||||||||||||||||||||| ||||||||| ||| ||| |||||||||||    
T  1829849 acgtaggaaaaagtgagggactaaaagatacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggaccgttggatcaaataagc 1829752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 58 - 209
Target Start/End: Complemental strand, 52963741 - 52963592
Alignment:
Q  58 tatgatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctggatttatttggcaaacggaggaaaatctgagggac 156  Q
    |||||||||||||| |||||| |||||||||||||||||   ||||| ||||||||||| |||  |||||||||| ||||||||| ||||  ||||||||    
T  52963741 tatgatggaccacttttaaggctggtccaccatagacat---ttggagttaaagttaacagtcgagatttatttgacaaacggagaaaaacttgagggac 52963645  T
Q  157 caaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatattt 209  Q
    |||||| || | | ||||||||||| ||||||||||||||||||||| |||||    
T  52963644 caaaacatacgatttattaattgtgagaccaaaatgaaaacttgaaattattt 52963592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 105 - 234
Target Start/End: Complemental strand, 390344 - 390215
Alignment:
Q  105 ttaaagttaactgtctggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaa 204  Q
    ||||| ||||| ||| |||||||||||||||||||||||| |  |||||||||||||  || ||| |||||||||||||||||||||||||||||||||     
T  390344 ttaaacttaacagtcaggatttatttggcaaacggaggaagaaatgagggaccaaaatatacgttttattaattgtgggaccaaaatgaaaacttgaaat 390245  T
Q  205 tatttgaggaaccattgaatcaaataagcc 234  Q
    |||||  || |||| |||||||||||||||    
T  390244 tatttaggggaccaatgaatcaaataagcc 390215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 104 - 241
Target Start/End: Complemental strand, 42871223 - 42871086
Alignment:
Q  104 attaaagttaactgtctggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    |||||| ||||| ||| ||||||||||||||||||||||||||  ||||||||||||||||| ||| |||||||||||||| ||||||||||| ||||||    
T  42871223 attaaacttaacagtcaggatttatttggcaaacggaggaaaaagtgagggaccaaaacgtacgttttattaattgtgggatcaaaatgaaaatttgaaa 42871124  T
Q  204 atatttgaggaaccattgaatcaaataagccttaattt 241  Q
     || |   || ||||||| |||||||||||||| ||||    
T  42871123 ttaatcaggggaccattggatcaaataagcctttattt 42871086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 25 - 235
Target Start/End: Complemental strand, 1587388 - 1587179
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaa-gttaactgtctgga 123  Q
    ||||||||| | ||||| || ||||||||| | || |||||| |||| |||| ||||||| || ||||||||  || |  ||||| ||||||  || |||    
T  1587388 caaacggttaagattaacaaaattaataaggtatacgatggaacacttttaaagttggtctactatagacat--ttagagttaaaagttaaccatcggga 1587291  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaa 223  Q
    |||||||||||||||||||||||  ||||||||||||| ||| ||| ||||||||||| ||| |||||||||| || ||| ||||||||| ||| ||| |    
T  1587290 tttatttggcaaacggaggaaaaagtgagggaccaaaaggtacgttttattaattgtgagactaaaatgaaaatttaaaattatttgagggaccgttgga 1587191  T
Q  224 tcaaataagcct 235  Q
    ||||||||||||    
T  1587190 tcaaataagcct 1587179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 105 - 234
Target Start/End: Original strand, 37884266 - 37884395
Alignment:
Q  105 ttaaagttaactgtctggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaa 204  Q
    ||||| ||||| ||||||||||||||||||||||||||||||  | | ||||||||| |||  || |||||||| |||||| |||||||||| || |||     
T  37884266 ttaaacttaacagtctggatttatttggcaaacggaggaaaaagtaaaggaccaaaaggtacattttattaattatgggacaaaaatgaaaatttaaaat 37884365  T
Q  205 tatttgaggaaccattgaatcaaataagcc 234  Q
    ||||||||| ||||||||||||||||||||    
T  37884366 tatttgagggaccattgaatcaaataagcc 37884395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 121 - 236
Target Start/End: Original strand, 1831268 - 1831383
Alignment:
Q  121 ggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccatt 220  Q
    |||||||||||  ||| |||||||||  ||||||||||||| ||| ||| ||||||||||||||| ||||||||||||||||| || |||||| ||||||    
T  1831268 ggatttatttgaaaaatggaggaaaaaatgagggaccaaaatgtacgttttattaattgtgggactaaaatgaaaacttgaaattaattgagggaccatt 1831367  T
Q  221 gaatcaaataagcctt 236  Q
    | ||||||||||||||    
T  1831368 ggatcaaataagcctt 1831383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 78 - 203
Target Start/End: Original strand, 10168745 - 10168870
Alignment:
Q  78 gttggtccaccatagacatcatttggattaaagttaactgtc-tggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaa 176  Q
    |||||||||||||||||||  |  || ||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||    || ||||||    
T  10168745 gttggtccaccatagacatt-tgggggttaaagttaactgtcatggatttatttggcaaacggaggaaaatgtgagggactaaaacgccatttttattaa 10168843  T
Q  177 ttgtgggaccaaaatgaaaacttgaaa 203  Q
    ||||||||||||||||||||| |||||    
T  10168844 ttgtgggaccaaaatgaaaacatgaaa 10168870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 73 - 235
Target Start/End: Original strand, 1588045 - 1588208
Alignment:
Q  73 ttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttat 171  Q
    |||||||||||| ||||||||||||||||||  ||||| ||||| |||   |||||||||| |||||||||||||  |||||||   |||||||  || |    
T  1588045 ttaaggttggtctaccatagacatcatttggggttaaacttaacagtcataatttatttggtaaacggaggaaaaagtgagggatttaaacgtacatttt 1588144  T
Q  172 attaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaatcaaataagcct 235  Q
    |||||||||||||| ||||||||||||| ||| ||||||||| ||||    |||||||||||||    
T  1588145 attaattgtgggactaaaatgaaaacttaaaattatttgagggaccaaaagatcaaataagcct 1588208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 25 - 203
Target Start/End: Complemental strand, 23202053 - 23201875
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggat 124  Q
    ||||||||  |||||||||  ||||||| ||  |||| || ||||||||||| | || ||||||||| |||||||||  |||||| ||||| ||  ||||    
T  23202053 caaacggtcgaaattaaaataattaataggacctatggtgtaccactcttaaagatgatccaccataaacatcatttttattaaacttaacggttgggat 23201954  T
Q  125 ttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    ||||||||||||||||||||||  ||||||||||||| |    || |||||| |||||||||||||| ||||| |||||    
T  23201953 ttatttggcaaacggaggaaaaggtgagggaccaaaatgccatttttattaaatgtgggaccaaaataaaaacatgaaa 23201875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 25 - 203
Target Start/End: Complemental strand, 53432268 - 53432091
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctgg-a 123  Q
    ||||||||| ||||| |||| ||||||||| | |||| ||  |||||||||| |||||| ||||||||||||  || || ||||| ||||| ||| || |    
T  53432268 caaacggttaaaattgaaaaaattaataaggtgtatggtgagccactcttaaagttggttcaccatagacat--ttggggttaaacttaaccgtcaggga 53432171  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    |||||||| | |||| ||| |||  |||||||||||||| || ||| ||||| || ||||||||||||||||||||||||    
T  53432170 tttatttgaccaacgaaggcaaacttgagggaccaaaacataagttttattacttatgggaccaaaatgaaaacttgaaa 53432091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 105 - 232
Target Start/End: Complemental strand, 27847805 - 27847678
Alignment:
Q  105 ttaaagttaactgtctggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaa 204  Q
    ||||| ||||| |||||||||||||||||||||||| |||||  | ||||||| |||  ||  || ||||||||||||||||||||| |||||||||||     
T  27847805 ttaaacttaaccgtctggatttatttggcaaacggaagaaaaattaagggaccgaaaaatacattttattaattgtgggaccaaaataaaaacttgaaat 27847706  T
Q  205 tatttgaggaaccattgaatcaaataag 232  Q
    |||||||||||  |||  ||||||||||    
T  27847705 tatttgaggaattattagatcaaataag 27847678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 35 - 203
Target Start/End: Original strand, 52241077 - 52241242
Alignment:
Q  35 aaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctggatttatttggc 133  Q
    ||||||| || | ||||||| | ||| |||||||||| |||||| ||||| |||||||| ||   ||||| ||||||||||| ||| | |||||||||||    
T  52241077 aaattaacaaaactaataaggtctatcatggaccacttttaaggatggtc-accatagatat---ttggagttaaagttaacggtcggaatttatttggc 52241172  T
Q  134 aaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    |||||||||||||  ||||| | ||||||||| ||| |||||||||||| | |||||||||||| |||||    
T  52241173 aaacggaggaaaagatgaggaatcaaaacgtacgttttattaattgtggaatcaaaatgaaaacatgaaa 52241242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 44501628 - 44501516
Alignment:
Q  122 gatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattg 221  Q
    |||||||||||||||| ||| ||||  ||||||||  ||||||| ||| |||||||| |||||||| ||||||||||||||| ||||||||| |||| ||    
T  44501628 gatttatttggcaaacagagaaaaaagtgagggacttaaacgtacgttttattaattatgggaccagaatgaaaacttgaaattatttgagggaccaatg 44501529  T
Q  222 aatcaaataagcc 234  Q
      |||||||||||    
T  44501528 gttcaaataagcc 44501516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 122 - 209
Target Start/End: Original strand, 54485551 - 54485638
Alignment:
Q  122 gatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatattt 209  Q
    ||||||||||||||||||| |||||  ||||||| ||||||| ||||| |||||||| ||||| |||||||||||||||||| |||||    
T  54485551 gatttatttggcaaacggatgaaaacttgagggatcaaaacgaatgttttattaattatgggatcaaaatgaaaacttgaaattattt 54485638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 125 - 231
Target Start/End: Original strand, 42872308 - 42872414
Alignment:
Q  125 ttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaat 224  Q
    ||||||||||||||||||||||  |||||||||||||||||  || |||||||| ||||||||||||||||| | | || || ||  || ||||||||||    
T  42872308 ttatttggcaaacggaggaaaaagtgagggaccaaaacgtacattttattaattatgggaccaaaatgaaaaatggtaattaattaggggaccattgaat 42872407  T
Q  225 caaataa 231  Q
    |||||||    
T  42872408 caaataa 42872414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 120 - 234
Target Start/End: Original strand, 53205487 - 53205601
Alignment:
Q  120 tggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccat 219  Q
    |||||||||||||||||||||||||||  |||||||| ||||||  | || | ||||||||||||| ||||||||||  ||||| |||||| || || |     
T  53205487 tggatttatttggcaaacggaggaaaaagtgagggactaaaacgcctatttttttaattgtgggacgaaaatgaaaatctgaaattatttgggggactaa 53205586  T
Q  220 tgaatcaaataagcc 234  Q
    |||||||||||||||    
T  53205587 tgaatcaaataagcc 53205601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 121 - 234
Target Start/End: Original strand, 1190197 - 1190310
Alignment:
Q  121 ggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccatt 220  Q
    ||||||||||||||||| ||| ||||  ||||| ||  ||||||| ||| |||||||| |||||||||||||||||||| ||| ||||||||| |||| |    
T  1190197 ggatttatttggcaaacagagaaaaaagtgaggtacttaaacgtacgttttattaattatgggaccaaaatgaaaacttaaaattatttgagggaccaat 1190296  T
Q  221 gaatcaaataagcc 234  Q
    |  |||||||||||    
T  1190297 ggttcaaataagcc 1190310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 121 - 206
Target Start/End: Original strand, 50548228 - 50548313
Alignment:
Q  121 ggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaata 206  Q
    ||||||||||||||||| ||||||||| |||||||| |||||||   |  ||||||||||||||||||||||||||| ||||||||    
T  50548228 ggatttatttggcaaacagaggaaaatgtgagggactaaaacgttattcttattaattgtgggaccaaaatgaaaacatgaaaata 50548313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 31968397 - 31968472
Alignment:
Q  121 ggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaa 196  Q
    ||||||||||||||||| ||||||||  ||| ||||||||||||| ||| |||||||||| |||||||||||||||    
T  31968397 ggatttatttggcaaacagaggaaaaagtgaaggaccaaaacgtacgttttattaattgtaggaccaaaatgaaaa 31968472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 56085553 - 56085482
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacat 96  Q
    |||||||||||||||||||  ||||||| ||| |||| |||||||||||||||||| |||||||||||||||    
T  56085553 caaacggtttaaattaaaataattaataggatctatggtggaccactcttaaggttagtccaccatagacat 56085482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 36 - 197
Target Start/End: Original strand, 7708710 - 7708869
Alignment:
Q  36 aattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggatttatttggcaa 135  Q
    |||||| || ||||||||| | ||||||| |||||| ||||||||||||||||||||| ||  || |  |||||||||||  |  |||||||||||||||    
T  7708710 aattaacaaaattaataaggtctatgatgtaccacttttaaggttggtccaccatagatat--ttagagttaaagttaacacttgggatttatttggcaa 7708807  T
Q  136 acggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaac 197  Q
    || ||| ||||  |||||||| ||||||    || |||||||||| | ||||||||||||||    
T  7708808 acagagaaaaaggtgagggactaaaacgccacttttattaattgtagaaccaaaatgaaaac 7708869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 25 - 203
Target Start/End: Complemental strand, 13165701 - 13165525
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtc-tgg 122  Q
    |||||||||||||||||||  |||||| |  | |||| |||||||||||||||||||||||||||||||    ||||| | ||||| ||||| |||  ||    
T  13165701 caaacggtttaaattaaaataattaatgaagtctatggtggaccactcttaaggttggtccaccataga---aatttgaagttaaacttaacagtcaagg 13165605  T
Q  123 atttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    ||||||||| ||||||||||||||  ||| |||| ||||||    || ||||||||  ||||||||||||||||| |||||    
T  13165604 atttatttgacaaacggaggaaaagatgaaggacgaaaacgccatttttattaatt-agggaccaaaatgaaaacatgaaa 13165525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 25 - 203
Target Start/End: Original strand, 53435663 - 53435840
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtct-gga 123  Q
    ||||||||| ||||| |||| |||||| |  | || | |||||||||||||||||||||| |||||||||||  ||    ||||| ||||| |||  |||    
T  53435663 caaacggttaaaatttaaaaaattaatgaagtctacggtggaccactcttaaggttggtctaccatagacat--ttaaagttaaacttaaccgtcaagga 53435760  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    |||||||| | |||||||| |||  |||||| ||||||| |  ||| ||||| || ||||||||||||||||||||||||    
T  53435761 tttatttgaccaacggaggtaaacttgaggggccaaaacatgagttttattacttatgggaccaaaatgaaaacttgaaa 53435840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 46 - 196
Target Start/End: Complemental strand, 40723412 - 40723264
Alignment:
Q  46 attaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggatttatttggcaaacggaggaaa 145  Q
    ||||||| ||| |||| | ||||||||||||||||||||||||||| ||||  ||  | ||||| ||||| || |||||||||||| |  ||||||  ||    
T  40723412 attaataggatctatggtagaccactcttaaggttggtccaccatatacat--ttgaggttaaacttaacagtatggatttatttgaccgacggagataa 40723315  T
Q  146 atctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaa 196  Q
    | || |||||||||||| |  ||| ||||| || |||||||||||||||||    
T  40723314 acctaagggaccaaaacatgagttttattagttatgggaccaaaatgaaaa 40723264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 44498667 - 44498596
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacat 96  Q
    |||||||||| ||||||||  ||||||| ||| |||| ||||||||||||||||||| ||||||||||||||    
T  44498667 caaacggttttaattaaaataattaataggatctatggtggaccactcttaaggttgatccaccatagacat 44498596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 10167536 - 10167454
Alignment:
Q  121 ggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    ||||||||||| ||||||||||||||| |||||||| |||| | |  || |||||||||||| |||||||||||||| |||||    
T  10167536 ggatttatttgacaaacggaggaaaatatgagggactaaaatgcaatttttattaattgtggtaccaaaatgaaaacatgaaa 10167454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 31965946 - 31965864
Alignment:
Q  121 ggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    ||||||||||||||||||||||||||  ||||||||||||| |||  || | |||||||| |||||| ||| |||||||||||    
T  31965946 ggatttatttggcaaacggaggaaaaagtgagggaccaaaatgtacattttcttaattgtaggaccagaataaaaacttgaaa 31965864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 33232703 - 33232777
Alignment:
Q  122 gatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaa 196  Q
    |||||||||||||||||||||||||| |||||||| ||||||    || ||||||||||||||||||||| ||||    
T  33232703 gatttatttggcaaacggaggaaaatgtgagggactaaaacgccatttttattaattgtgggaccaaaataaaaa 33232777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 235 - 297
Target Start/End: Original strand, 52440575 - 52440637
Alignment:
Q  235 ttaatttaatgcacttatttgaagttttttaagtttttaagtatcaaataggtctttaaaagg 297  Q
    |||||||||||||| ||||| || |||||||||||||||||| ||||||||||| ||||||||    
T  52440575 ttaatttaatgcacctatttaaatttttttaagtttttaagtttcaaataggtccttaaaagg 52440637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 105 - 205
Target Start/End: Complemental strand, 54484441 - 54484340
Alignment:
Q  105 ttaaagttaactgtctg-gatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    ||||||||||| || || |||||||||||||||| ||||||||| | ||||||||||||| | ||| |||||||| ||| |||||||| |||| ||| ||    
T  54484441 ttaaagttaacagtttgagatttatttggcaaacagaggaaaattttagggaccaaaacgaacgttttattaattatggtaccaaaataaaaaattggaa 54484342  T
Q  204 at 205  Q
    ||    
T  54484341 at 54484340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 25 - 199
Target Start/End: Original strand, 11438478 - 11438651
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctg-ga 123  Q
    |||| ||||||||||||| | ||||||| | |||||| ||||||||    |  ||||||||||| |||||||  || || ||||| ||||  ||| | ||    
T  11438478 caaatggtttaaattaaagaaattaatagggtttatggtggaccacctacactgttggtccaccgtagacat--ttggggttaaacttaaaagtcagaga 11438575  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaactt 199  Q
    ||||||| ||||| |||||||||  |||||||||||||||  |||| |||||||| || ||||||||| |||||||    
T  11438576 tttatttagcaaatggaggaaaaagtgagggaccaaaacgagtgttttattaattatgagaccaaaataaaaactt 11438651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 49344015 - 49344129
Alignment:
Q  122 gatttatttggcaaacggaggaaaatctga-gggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatattt-gaggaaccat 219  Q
    |||||||||||||||||||||||||  ||| |||||  ||||  | ||| ||||||||||||||||||||| ||| ||| ||| ||||| |||| |||||    
T  49344015 gatttatttggcaaacggaggaaaaagtgaagggacttaaacccacgttttattaattgtgggaccaaaataaaagcttaaaattatttagagg-accat 49344113  T
Q  220 tgaatcaaataagcct 235  Q
    || |||||||||||||    
T  49344114 tggatcaaataagcct 49344129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 4871695 - 4871629
Alignment:
Q  30 ggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacat 96  Q
    ||||||||||||||  ||||||| ||| || | |||||||||||| |||||||||||||||||||||    
T  4871695 ggtttaaattaaaataattaataggatctacggtggaccactctttaggttggtccaccatagacat 4871629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 121 - 234
Target Start/End: Original strand, 4871369 - 4871482
Alignment:
Q  121 ggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccatt 220  Q
    ||||||||||| ||||||||| ||||  || |||||  |||| || ||| |||||||||| | |||||||||||||| ||||| |||||  || |||| |    
T  4871369 ggatttatttgacaaacggagaaaaacgtgggggacttaaacatacgttttattaattgtagaaccaaaatgaaaacatgaaattattttggggaccaat 4871468  T
Q  221 gaatcaaataagcc 234  Q
    | ||||||||||||    
T  4871469 ggatcaaataagcc 4871482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 235 - 314
Target Start/End: Original strand, 42158861 - 42158938
Alignment:
Q  235 ttaatttaatgcacttatttgaagttttttaagtttttaagtatcaaataggtctttaaaaggttaacaaagacctattt 314  Q
    |||||||| ||||| ||||||||||||||||||  ||||||| |||||| |||| |||||||| ||| || |||||||||    
T  42158861 ttaatttagtgcacatatttgaagttttttaag--tttaagtttcaaattggtccttaaaagggtaataaggacctattt 42158938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 123 - 235
Target Start/End: Complemental strand, 49342728 - 49342616
Alignment:
Q  123 atttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattga 222  Q
    ||||||||  |||| |||||||||  ||||||||  |||||||  || |||||||||||||| |||||||||||||| ||| ||||   ||||| ||||     
T  49342728 atttatttaacaaatggaggaaaaagtgagggacttaaacgtacattttattaattgtgggatcaaaatgaaaacttaaaattattcagggaacgattgg 49342629  T
Q  223 atcaaataagcct 235  Q
    |||| ||||||||    
T  49342628 atcagataagcct 49342616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 53204472 - 53204396
Alignment:
Q  121 ggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaac 197  Q
    ||||||||||||||||||||| ||||  ||||| || ||||||  |||| ||||||||||| || ||||||||||||    
T  53204472 ggatttatttggcaaacggagaaaaaattgaggaactaaaacgcctgttttattaattgtgagatcaaaatgaaaac 53204396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 4714226 - 4714155
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacat 96  Q
    |||| |||| ||||| ||||||||||| |  | |||| ||||||||||||||||||| ||||||||||||||    
T  4714226 caaatggttaaaatttaaaatattaatgaagtctatggtggaccactcttaaggttgatccaccatagacat 4714155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 25 - 156
Target Start/End: Original strand, 13166679 - 13166809
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtc-tgg 122  Q
    ||||||||| ||||| ||||||||||| |  | |||| |||| |||||||| |||||||||| ||||||   |||||| | ||||| ||||| |||  ||    
T  13166679 caaacggttaaaatttaaaatattaatgaattctatggtggatcactcttacggttggtccatcataga---catttgaagttaaacttaacagtcaagg 13166775  T
Q  123 atttatttggcaaacggaggaaaatctgagggac 156  Q
    |||||||||||||||||| |||||  ||||||||    
T  13166776 atttatttggcaaacggatgaaaaagtgagggac 13166809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 30 - 196
Target Start/End: Original strand, 23203869 - 23204033
Alignment:
Q  30 ggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggatttatt 129  Q
    |||| ||||||| || ||||||||| | ||  || ||||||| ||||||||| ||||||||||| ||  || |  ||||||||||   |  ||||||| |    
T  23203869 ggttaaaattaacaaaattaataaggtctacaatagaccacttttaaggttgatccaccatagatat--ttagagttaaagttaatacttgggatttaat 23203966  T
Q  130 tggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaa 196  Q
    |||||||||||| ||||  ||| |||||||||||    || |||||| |||||||||||||||||||    
T  23203967 tggcaaacggagaaaaagatgacggaccaaaacgccatttttattaaatgtgggaccaaaatgaaaa 23204033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 122 - 197
Target Start/End: Complemental strand, 54865214 - 54865140
Alignment:
Q  122 gatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaac 197  Q
    |||||||||| ||||||||||||||| |||||||| |||||  |  || |||||||| ||||||||||||||||||    
T  54865214 gatttatttgacaaacggaggaaaatgtgagggactaaaacaca-attttattaattatgggaccaaaatgaaaac 54865140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 2311154 - 2311088
Alignment:
Q  30 ggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacat 96  Q
    |||| ||||||| |||||||||||| | || ||| ||||||| ||||| ||||||||||||||||||    
T  2311154 ggttaaaattaacaatattaataaggtctacgatagaccacttttaagattggtccaccatagacat 2311088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 7053383 - 7053321
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccac 87  Q
    |||||| ||||||||||||| ||||||| ||| |||| |||| |||||||||| |||||||||    
T  7053383 caaacgatttaaattaaaaaaattaataggatctatggtggatcactcttaagattggtccac 7053321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 50547017 - 50546935
Alignment:
Q  121 ggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    ||||||||||||||||||| ||||||  |||||||| ||||||    || ||||||||||||||| |||||||| || |||||    
T  50547017 ggatttatttggcaaacggtggaaaagatgagggactaaaacgccatttttattaattgtgggactaaaatgaagacatgaaa 50546935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 255 - 304
Target Start/End: Original strand, 41038829 - 41038878
Alignment:
Q  255 gaagttttttaagtttttaagtatcaaataggtctttaaaaggttaacaa 304  Q
    |||||||||||||||||||||| ||||||| ||| |||||||| ||||||    
T  41038829 gaagttttttaagtttttaagtttcaaataagtccttaaaagggtaacaa 41038878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 8682758 - 8682829
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaag-gttggtccaccatagacat 96  Q
    |||| |||| |||||||||| ||||||| ||| ||||||||||||||||||||  || |||||||||||||||    
T  8682758 caaagggttgaaattaaaaa-attaatatgatctatgatggaccactcttaagatttagtccaccatagacat 8682829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 52138703 - 52138771
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccataga 93  Q
    |||||||||||||||| ||  ||||||| ||| |||| ||||||| |||||| ||||||| ||||||||    
T  52138703 caaacggtttaaattagaataattaataggatctatggtggaccattcttaaagttggtctaccataga 52138771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 19750204 - 19750275
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacat 96  Q
    |||||| ||||||||||||  ||||||| ||| |||| ||||| ||| ||||| || |||||||||||||||    
T  19750204 caaacgatttaaattaaaataattaataggatctatggtggacaacttttaagatttgtccaccatagacat 19750275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 19789602 - 19789531
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacat 96  Q
    |||||| ||||||||||||  ||||||| ||| |||| ||||| ||| ||||| || |||||||||||||||    
T  19789602 caaacgatttaaattaaaataattaataggatctatggtggacaacttttaagatttgtccaccatagacat 19789531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 96
Target Start/End: Complemental strand, 22069437 - 22069370
Alignment:
Q  29 cggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacat 96  Q
    |||| |||||||||||||||||||   | |||| || |||||| |||||||| |||||||||||||||    
T  22069437 cggtataaattaaaaatattaatagagtctatggtgaaccacttttaaggttcgtccaccatagacat 22069370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 26496219 - 26496290
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacat 96  Q
    |||||||||||||||| ||  ||||||| ||| |||| ||||||| | |||| || ||||||||||||||||    
T  26496219 caaacggtttaaattagaataattaataggatctatggtggaccatttttaaagtcggtccaccatagacat 26496290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 92
Target Start/End: Original strand, 49896494 - 49896561
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatag 92  Q
    |||||||||||||||||||  ||||| | ||| ||   |||||||||||| |||||||||||||||||    
T  49896494 caaacggtttaaattaaaataattaacaggatctacagtggaccactctttaggttggtccaccatag 49896561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 315
Target Start/End: Complemental strand, 21709782 - 21709725
Alignment:
Q  258 gttttttaagtttttaagtatcaaataggtctttaaaaggttaacaaagacctatttg 315  Q
    |||||||||||||||| || | ||||| ||| |||||||| ||| |||||||||||||    
T  21709782 gttttttaagtttttatgttttaaatatgtccttaaaagggtaataaagacctatttg 21709725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 669678 - 669733
Alignment:
Q  149 tgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaat 205  Q
    ||||||||||||| ||  ||| |||||||| ||||||||||||||||| ||||||||    
T  669678 tgagggaccaaaatgtgagttttattaattatgggaccaaaatgaaaa-ttgaaaat 669733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 238 - 270
Target Start/End: Complemental strand, 26709622 - 26709590
Alignment:
Q  238 atttaatgcacttatttgaagttttttaagttt 270  Q
    ||||||||||| |||||||||||||||||||||    
T  26709622 atttaatgcacgtatttgaagttttttaagttt 26709590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 122; Significance: 3e-62; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 25 - 234
Target Start/End: Original strand, 11317277 - 11317486
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggat 124  Q
    |||||| ||||||||||||  ||||||| ||| |||| | |||||||||||||||||||| |||||||||||||||||  ||||| ||||||||  ||||    
T  11317277 caaacgatttaaattaaaataattaataggatctatggtagaccactcttaaggttggtctaccatagacatcatttgagttaaacttaactgtgaggat 11317376  T
Q  125 ttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaat 224  Q
    ||||||| ||||||||||||||  |||||||||||||  |||||| |||||||||||||||||||||||||| |||||| ||||||||| ||||||||||    
T  11317377 ttatttgccaaacggaggaaaaattgagggaccaaaatatatgttttattaattgtgggaccaaaatgaaaatttgaaattatttgagggaccattgaat 11317476  T
Q  225 caaataagcc 234  Q
    ||||||||||    
T  11317477 caaataagcc 11317486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 25 - 235
Target Start/End: Original strand, 6030379 - 6030589
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggat 124  Q
    |||||||||||||||||||||||||||| ||| |||| | || ||||||||||||||||||||| |||||||||||||| ||||||||||||||   |||    
T  6030379 caaacggtttaaattaaaaatattaataggatctatggtagatcactcttaaggttggtccaccgtagacatcatttgggttaaagttaactgttgagat 6030478  T
Q  125 ttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaat 224  Q
    ||||||||||||  ||||||||| ||| ||| |||||||||  ||  ||||||||||||| |||||||||||||| ||| ||||||||| || |||| ||    
T  6030479 ttatttggcaaatagaggaaaatatgaaggatcaaaacgtacttttaattaattgtgggatcaaaatgaaaacttcaaattatttgagggactattggat 6030578  T
Q  225 caaataagcct 235  Q
    |||||||||||    
T  6030579 caaataagcct 6030589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 30 - 236
Target Start/End: Complemental strand, 43033282 - 43033078
Alignment:
Q  30 ggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggatttatt 129  Q
    ||||||||||||||  ||||||| | |||||| |||||||||||||||||||||| |||||||||||  ||  | ||||| |||||     |||||||||    
T  43033282 ggtttaaattaaaataattaatagggtttatggtggaccactcttaaggttggtctaccatagacat--ttgaggttaaacttaacatcgaggatttatt 43033185  T
Q  130 tggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaatcaaat 229  Q
    |||||||||||||||||  ||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||| ||||| ||| | ||||| |||||||    
T  43033184 tggcaaacggaggaaaaagtgagggaccaaaaggtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaagggatcattggatcaaat 43033085  T
Q  230 aagcctt 236  Q
    |||||||    
T  43033084 aagcctt 43033078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 25 - 236
Target Start/End: Complemental strand, 32469356 - 32469144
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggat 124  Q
    |||| ||||||||||||||  ||||||| ||| |||  |||||||||||||| |||||||||||||| |||| |||||  ||||| |||||| |  ||||    
T  32469356 caaagggtttaaattaaaataattaataggatctatagtggaccactcttaaagttggtccaccatatacataatttgagttaaacttaactataaggat 32469257  T
Q  125 ttatttggcaaacggaggaaaatctgagggaccaaaacgtat--gttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattga 222  Q
    ||||||||||| ||||||||||  ||| ||||||||| |||   ||| |||||||||||||| |||||||||||||||||| ||||||||| ||||||||    
T  32469256 ttatttggcaa-cggaggaaaaagtgaaggaccaaaaggtacacgttttattaattgtgggatcaaaatgaaaacttgaaattatttgagggaccattga 32469158  T
Q  223 atcaaataagcctt 236  Q
    ||||||||||||||    
T  32469157 atcaaataagcctt 32469144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 25 - 236
Target Start/End: Original strand, 42641770 - 42641980
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggat 124  Q
    ||||| |||||||||||||  ||||||| ||| |||| | |||||||||||||||||| |||||||||||||||||||| || || |||| |||  ||||    
T  42641770 caaacagtttaaattaaaataattaataggatctatggtagaccactcttaaggttggcccaccatagacatcatttgggttgaacttaattgtgaggat 42641869  T
Q  125 ttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaat 224  Q
    ||||||||||||||||  ||||  || |||||||||| ||  ||| |||||||| |||||||||||| |||| |||||| ||||||||| ||||||||||    
T  42641870 ttatttggcaaacgga-aaaaaagtgggggaccaaaaggtgcgttttattaattatgggaccaaaataaaaatttgaaattatttgagggaccattgaat 42641968  T
Q  225 caaataagcctt 236  Q
    ||||||| ||||    
T  42641969 caaataaacctt 42641980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 78 - 235
Target Start/End: Original strand, 28562773 - 28562928
Alignment:
Q  78 gttggtccaccatagacatcatttggattaaagttaactgtctggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaat 177  Q
    |||||||||||||| | ||  || |||||||| ||||| ||||||||||||||| ||||||||||||||  ||||||||||||| ||||||| |||||||    
T  28562773 gttggtccaccatatatat--ttgggattaaacttaacagtctggatttatttgacaaacggaggaaaaagtgagggaccaaaaggtatgttttattaat 28562870  T
Q  178 tgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaatcaaataagcct 235  Q
    | ||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  28562871 tatgggaccaaaatgaaaatttgaaattatttgagggaccattgaatcaaataagcct 28562928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 46 - 238
Target Start/End: Complemental strand, 11316117 - 11315927
Alignment:
Q  46 attaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggatttatttggcaaacggaggaaa 145  Q
    ||||||||| | || | ||||||| | ||||||||| ||||||||||||||  || | |||||| ||||| | | |||||||||||||||||||||||||    
T  11316117 attaataaggtctacggtggaccatttttaaggttgatccaccatagacat--ttggaattaaacttaacagccgggatttatttggcaaacggaggaaa 11316020  T
Q  146 atctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaatcaaataagccttaa 238  Q
    | |||||||||  ||||||| ||| ||||||||||||||||||||||||||||||||| |||||  || |||| ||||| |||||||||||||    
T  11316019 acctgagggacttaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaggggaccaatgaattaaataagccttaa 11315927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 25 - 203
Target Start/End: Complemental strand, 29219593 - 29219414
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcattt-ggattaaagttaactgtctgga 123  Q
    ||||||||| |||||||||  ||||||| ||| |||| ||||||||| ||||| ||||||||||||||||||||||| || ||||| ||||| ||  |||    
T  29219593 caaacggttgaaattaaaataattaataggatctatggtggaccacttttaagattggtccaccatagacatcatttggggttaaacttaacagttggga 29219494  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    |||||||||||||||||||||||  |||||||| ||||||    || ||||||||||||||||||||||||||| |||||    
T  29219493 tttatttggcaaacggaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaa 29219414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 25 - 203
Target Start/End: Complemental strand, 29332892 - 29332713
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcattt-ggattaaagttaactgtctgga 123  Q
    ||||||||| |||||||||  ||||||| ||| |||| ||||||||| ||||| ||||||||||||||||||||||| || ||||| ||||| ||  |||    
T  29332892 caaacggttgaaattaaaataattaataggatctatggtggaccacttttaagattggtccaccatagacatcatttggggttaaacttaacagttggga 29332793  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    |||||||||||||||||||||||  |||||||| ||||||    || ||||||||||||||||||||||||||| |||||    
T  29332792 tttatttggcaaacggaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaa 29332713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 25 - 234
Target Start/End: Complemental strand, 17459461 - 17459251
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctgga 123  Q
    |||||||||||||||| ||  ||||||| ||| |||| | || |||| ||||| || ||||||||||||||||||||||  ||||| ||||  ||| | |    
T  17459461 caaacggtttaaattataataattaataggatctatgttagatcacttttaagattcgtccaccatagacatcatttggggttaaacttaaaagtcagaa 17459362  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaa 223  Q
    |||||||||||||||||||||||  ||||||||  ||||||| ||| ||||||||||| ||||||||||||||||||||| ||||| ||| || | || |    
T  17459361 tttatttggcaaacggaggaaaaagtgagggacttaaacgtacgttttattaattgtgtgaccaaaatgaaaacttgaaattatttaagggactaatgga 17459262  T
Q  224 tcaaataagcc 234  Q
    |||||||||||    
T  17459261 tcaaataagcc 17459251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 46 - 234
Target Start/End: Original strand, 17460616 - 17460802
Alignment:
Q  46 attaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggatttatttggcaaacggaggaaa 145  Q
    ||||||||| | || ||| ||||||| ||||| ||||||||||||||||||  ||    ||||||||||| ||| |||||||||||| ||||||||||||    
T  17460616 attaataaggtctacgatagaccacttttaagattggtccaccatagacat--ttaaagttaaagttaacggtcgggatttatttgggaaacggaggaaa 17460713  T
Q  146 atctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaat-atttgaggaaccattgaatcaaataagcc 234  Q
    || ||||||||||||||||| ||| |||||||||||||| |||||||||||||||||| | ||| |||| ||||||| ||||||||||||    
T  17460714 atttgagggaccaaaacgtacgttttattaattgtgggatcaaaatgaaaacttgaaattaattagagg-accattggatcaaataagcc 17460802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 82 - 241
Target Start/End: Original strand, 7437727 - 7437886
Alignment:
Q  82 gtccaccatagacatcatttggattaaagttaactgtctggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtg 181  Q
    ||||| |||||| || |||||| ||||| |||| |||  |||||||||| | |||||||||||||  |||||||||||||  || ||| |||||||||||    
T  7437727 gtccatcatagatattatttgggttaaacttaattgttaggatttattttgtaaacggaggaaaaattgagggaccaaaatatacgttttattaattgtg 7437826  T
Q  182 ggaccaaaatgaaaacttgaaaatatttgaggaaccattgaatcaaataagccttaattt 241  Q
    |||||||||||||||||||||| |||||||| |||||||| |||||||||||||| ||||    
T  7437827 ggaccaaaatgaaaacttgaaattatttgagcaaccattggatcaaataagcctttattt 7437886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 25 - 234
Target Start/End: Complemental strand, 11547866 - 11547657
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctgga 123  Q
    |||||||||||||||| |||| |||||| ||| |||| |||||||||| |||||||||||||  |||||||||||||||  ||||| ||||| ||| |||    
T  11547866 caaacggtttaaattataaat-ttaatacgatctatggtggaccactcctaaggttggtccatgatagacatcatttggggttaaacttaacagtcagga 11547768  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaa 223  Q
    |||||||| |||||| |||||||  ||||||   ||||| | |||| |||||||| || ||||||||||||||||||||| ||||| | | |||| | ||    
T  11547767 tttatttgacaaacgaaggaaaaaatgaggggttaaaacatgtgttttattaattatgagaccaaaatgaaaacttgaaattatttaaaggaccaataaa 11547668  T
Q  224 tcaaataagcc 234  Q
    |||||||||||    
T  11547667 tcaaataagcc 11547657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 25 - 203
Target Start/End: Original strand, 18616914 - 18617093
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcattt-ggattaaagttaactgtctgga 123  Q
    ||||||||| |||||||||  ||||||| ||| |||| ||||||||| |||||  |||||||||||||||||||||| || ||||| ||||  ||  |||    
T  18616914 caaacggttgaaattaaaataattaataggatctatggtggaccacttttaagactggtccaccatagacatcatttggggttaaacttaatagttggga 18617013  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    |||||||||||||||||||||||  |||||||| ||||||    || ||||||||||||||||||||||||||| |||||    
T  18617014 tttatttggcaaacggaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaa 18617093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 46 - 231
Target Start/End: Original strand, 43034401 - 43034586
Alignment:
Q  46 attaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggatttatttggcaaacggaggaaa 145  Q
    ||||||| ||| |||| |||||||||||||| |||| ||||||||||||||      | ||||| ||||| |    |||||||||| |||||||||||||    
T  43034401 attaataggatctatggtggaccactcttaaagttgatccaccatagacatttgagaggttaaacttaacagcgaagatttatttgacaaacggaggaaa 43034500  T
Q  146 atctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaatcaaataa 231  Q
    |  ||||||||||||| ||| ||| ||||||||||| ||  ||||||||||||||||| ||||||||| |||||||||||||||||    
T  43034501 aagtgagggaccaaaaggtacgttttattaattgtgagattaaaatgaaaacttgaaattatttgagggaccattgaatcaaataa 43034586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 30 - 234
Target Start/End: Original strand, 32470491 - 32470693
Alignment:
Q  30 ggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctggatttat 128  Q
    |||| ||||||| || ||||||||| | || ||||||||| | ||||||||  ||||||||||||||   ||||| ||||| ||||| | | ||||||||    
T  32470491 ggttaaaattaacaaaattaataaggtctacgatggaccatttttaaggtttatccaccatagacat---ttggagttaaacttaacagccgggatttat 32470587  T
Q  129 ttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaatcaaa 228  Q
    ||| ||||||||||||||  ||||| ||  ||||||| ||| ||||||||||||||||||||| ||||||||||| |||||  || || | || ||||||    
T  32470588 ttgacaaacggaggaaaacatgaggaacttaaacgtacgttttattaattgtgggaccaaaataaaaacttgaaattatttaggggactaatggatcaaa 32470687  T
Q  229 taagcc 234  Q
    ||||||    
T  32470688 taagcc 32470693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 25 - 203
Target Start/End: Original strand, 1085297 - 1085473
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggat 124  Q
    ||||||||  |||||||||  ||||||| ||| |||| || ||||||||||| | || ||||||||| |||||||||  |||||| ||||| ||   |||    
T  1085297 caaacggtcgaaattaaaataattaataggatctatggtgtaccactcttaaagatgatccaccataaacatcatttttattaaacttaacggttgtgat 1085396  T
Q  125 ttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    ||||||||||||||||||||||  |||||||||||||||    || |||||| ||||| |||||||||||||| |||||    
T  1085397 ttatttggcaaacggaggaaaa--tgagggaccaaaacgccaattttattaaatgtggtaccaaaatgaaaacatgaaa 1085473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 123 - 232
Target Start/End: Complemental strand, 28561477 - 28561368
Alignment:
Q  123 atttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattga 222  Q
    ||||||||| |||||| |||||||  |||||||||||||  || ||| ||||||||||| ||||||||||||||||| ||| ||||| ||| ||||||||    
T  28561477 atttatttgacaaacgtaggaaaaggtgagggaccaaaagatacgttttattaattgtgagaccaaaatgaaaacttaaaattatttaagggaccattga 28561378  T
Q  223 atcaaataag 232  Q
    ||||||||||    
T  28561377 atcaaataag 28561368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 111 - 230
Target Start/End: Complemental strand, 7436587 - 7436469
Alignment:
Q  111 ttaactgtctggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttg 210  Q
    ||||||||  ||||||||||| |||||||| |||||  ||||| ||||||| |||| || |||||||||| |||||||||| ||||||||||| ||||||    
T  7436587 ttaactgttaggatttatttgacaaacggaagaaaaattgagg-accaaaaggtatattttattaattgtaggaccaaaataaaaacttgaaattatttg 7436489  T
Q  211 aggaaccattgaatcaaata 230  Q
    ||| ||||||| ||||||||    
T  7436488 agggaccattggatcaaata 7436469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 31 - 198
Target Start/End: Complemental strand, 34513012 - 34512848
Alignment:
Q  31 gtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggatttattt 130  Q
    ||||||||||||||  |||||||| | |||| ||||||||||||| ||||| ||||||||| |||| |    | ||||| ||||| |||  |||||||||    
T  34513012 gtttaaattaaaaaatttaataaggtatatggtggaccactcttatggttgatccaccatatacattaa---ggttaaacttaacagtcatgatttattt 34512916  T
Q  131 ggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaact 198  Q
    | | |||||||| |||| ||||||| |||||| |  ||| |||||||| |||||||||||||||||||    
T  34512915 gactaacggaggcaaatttgagggatcaaaacatgagttttattaattatgggaccaaaatgaaaact 34512848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 25 - 198
Target Start/End: Complemental strand, 34464174 - 34464002
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctg-ga 123  Q
    ||||| ||||||||||||||   ||||||| | |||| |||||||||||||||||||||| || ||||||||  || || ||||| ||||| ||| | ||    
T  34464174 caaacagtttaaattaaaaaatctaataaggtctatggtggaccactcttaaggttggtcaacgatagacat--ttggggttaaacttaacagtcagaga 34464077  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaact 198  Q
    ||||||||   |||||||| ||| |||| |||||||||  | |||| |||||||| |   |||||||||||||||    
T  34464076 tttatttgattaacggaggcaaacctgatggaccaaaagatttgttttattaattatcaaaccaaaatgaaaact 34464002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 34467712 - 34467641
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacat 96  Q
    ||||| ||||||||||||||  |||||||| |||||| |||||||||||||||||| ||||| |||||||||    
T  34467712 caaacagtttaaattaaaaaacttaataaggtttatggtggaccactcttaaggtttgtccatcatagacat 34467641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 34513463 - 34513534
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacat 96  Q
    |||||||||||||||||||| ||||||||| | |||| |||| ||||||||||||||||| |||||| ||||    
T  34513463 caaacggtttaaattaaaaaaattaataaggtctatggtggatcactcttaaggttggtcaaccatatacat 34513534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 78 - 218
Target Start/End: Original strand, 2277432 - 2277571
Alignment:
Q  78 gttggtccaccatagacatcatttggattaaagttaactgtc-tggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaa 176  Q
    |||||||||||||||||||  || || ||||||||||||  | |||||||||||| |  || ||||  ||  |||||||||||||| || ||| |||||     
T  2277432 gttggtccaccatagacat--ttggggttaaagttaactcccatggatttatttgaccgactgaggtgaacttgagggaccaaaacataagttttattac 2277529  T
Q  177 ttgtgggaccaaaatgaaaacttgaaaatatttgaggaacca 218  Q
    || ||||||||||||||||||| |||| ||||||||| ||||    
T  2277530 ttatgggaccaaaatgaaaactggaaattatttgagggacca 2277571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 122 - 203
Target Start/End: Complemental strand, 34469068 - 34468987
Alignment:
Q  122 gatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    |||||||||||||||| || |||||| |||||||| |||||||   || ||||||||||| ||||||||||||||| |||||    
T  34469068 gatttatttggcaaacagaagaaaatgtgagggactaaaacgtcatttttattaattgtgcgaccaaaatgaaaacatgaaa 34468987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 8320963 - 8320895
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccataga 93  Q
    |||||||||||||||||||  |||||||  || |||| |||||| ||||||||| ||||||||||||||    
T  8320963 caaacggtttaaattaaaataattaatataatctatggtggaccgctcttaaggatggtccaccataga 8320895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 196
Target Start/End: Complemental strand, 18615644 - 18615552
Alignment:
Q  104 attaaagttaactgtctggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaa 196  Q
    |||||| ||||| ||| ||||||||||||||||||||||||||| |  ||||| |||| |    || ||||||||||| ||||||||||||||    
T  18615644 attaaaattaacagtcgggatttatttggcaaacggaggaaaatgtaggggactaaaaagccatttttattaattgtgagaccaaaatgaaaa 18615552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 196
Target Start/End: Original strand, 29220864 - 29220956
Alignment:
Q  104 attaaagttaactgtctggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaa 196  Q
    |||||| ||||| ||| ||||| ||||||||||| ||||||||| | |||||| |||| |    || ||||||||||||||||||||||||||    
T  29220864 attaaaattaacagtcgggattaatttggcaaacagaggaaaatgtaagggactaaaaagccatttttattaattgtgggaccaaaatgaaaa 29220956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 196
Target Start/End: Original strand, 29334163 - 29334255
Alignment:
Q  104 attaaagttaactgtctggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaa 196  Q
    |||||| ||||| ||| ||||| ||||||||||| ||||||||| | |||||| |||| |    || ||||||||||||||||||||||||||    
T  29334163 attaaaattaacagtcgggattaatttggcaaacagaggaaaatgtaagggactaaaaagccatttttattaattgtgggaccaaaatgaaaa 29334255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 4920968 - 4921039
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacat 96  Q
    |||||||||||||||| ||  ||||||| |||||||| ||||||| | |||| ||||||| |||||||||||    
T  4920968 caaacggtttaaattagaataattaataggatttatggtggaccatttttaaagttggtctaccatagacat 4921039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 235 - 297
Target Start/End: Original strand, 28172982 - 28173044
Alignment:
Q  235 ttaatttaatgcacttatttgaagttttttaagtttttaagtatcaaataggtctttaaaagg 297  Q
    |||||||||||||| |||||| |||  ||||||||||||||| |||||||| || ||||||||    
T  28172982 ttaatttaatgcacctatttgtagtgctttaagtttttaagtttcaaatagatcgttaaaagg 28173044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 121 - 209
Target Start/End: Original strand, 12359684 - 12359772
Alignment:
Q  121 ggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatattt 209  Q
    ||||||||||||| |||  |||||||  |||||||||||||||    || ||||||||||||||| |||| |||||| ||||| |||||    
T  12359684 ggatttatttggcgaacaaaggaaaaaatgagggaccaaaacgccaattttattaattgtgggactaaaacgaaaacatgaaattattt 12359772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 203
Target Start/End: Original strand, 44192453 - 44192533
Alignment:
Q  123 atttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    ||||||||| ||||||||||||||| |||||||| |||| |    || |||||||| ||||| |||||||||||| |||||    
T  44192453 atttatttgacaaacggaggaaaatgtgagggactaaaatgccatttttattaattttgggatcaaaatgaaaacatgaaa 44192533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 231
Target Start/End: Complemental strand, 36010681 - 36010578
Alignment:
Q  128 tttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaatcaa 227  Q
    ||||||||||| |||||||  |||||||| ||||  || ||| ||||||| ||  ||||||||||||||| ||||| ||||| ||| || | || |||||    
T  36010681 tttggcaaacgaaggaaaaagtgagggactaaaatatacgttttattaatcgtaagaccaaaatgaaaacatgaaattatttaagggactaatggatcaa 36010582  T
Q  228 ataa 231  Q
    ||||    
T  36010581 ataa 36010578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 33613695 - 33613757
Alignment:
Q  235 ttaatttaatgcacttatttgaag-ttttttaagtttttaagtatcaaataggtctttaaaag 296  Q
    |||||||||| ||| ||||||||| |||||||||| ||||||| | ||||||||| |||||||    
T  33613695 ttaatttaatacacctatttgaagtttttttaagtatttaagttttaaataggtcattaaaag 33613757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 218
Target Start/End: Complemental strand, 34147289 - 34147150
Alignment:
Q  78 gttggtccaccatagacatcatttggattaaagttaactgtc-tggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaa 176  Q
    |||||||||||||||||||  || || |||||||||||   | |||||||||||| |   ||||||  ||  |||||||||||||| |  ||| |||||     
T  34147289 gttggtccaccatagacat--ttggggttaaagttaacacccatggatttatttgactggcggaggtgaacttgagggaccaaaacatgagttttattac 34147192  T
Q  177 ttgtgggaccaaaatgaaaacttgaaaatatttgaggaacca 218  Q
    || |||||||||||||||||||  ||| ||||||||| ||||    
T  34147191 ttatgggaccaaaatgaaaactgaaaattatttgagggacca 34147150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 161
Target Start/End: Complemental strand, 6028917 - 6028787
Alignment:
Q  30 ggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctg-gatttat 128  Q
    |||| ||||||| || |||| |||| | || ||||||||||| |||||  |||||||||||| ||||  || |  ||||||||||| ||| |  ||||||    
T  6028917 ggttaaaattaacaaaattattaaggtctacgatggaccacttttaagactggtccaccatatacat--ttagagttaaagttaaccgtcggaaatttat 6028820  T
Q  129 ttggcaaacggaggaaaatctgagggaccaaaa 161  Q
    |||||||||| || ||||  |||||||||||||    
T  6028819 ttggcaaacgaagaaaaacttgagggaccaaaa 6028787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 36011648 - 36011721
Alignment:
Q  122 gatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaa 195  Q
    |||||||||||||||||||  ||||  |||||||| ||||||||  || |||||||| |||||  |||||||||    
T  36011648 gatttatttggcaaacggattaaaaaatgagggactaaaacgtacattttattaattatgggattaaaatgaaa 36011721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 235 - 271
Target Start/End: Original strand, 38768813 - 38768849
Alignment:
Q  235 ttaatttaatgcacttatttgaagttttttaagtttt 271  Q
    ||||||||||| | |||||||||||||||||||||||    
T  38768813 ttaatttaatgtatttatttgaagttttttaagtttt 38768849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 113; Significance: 6e-57; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 25 - 240
Target Start/End: Original strand, 54093 - 54309
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctgga 123  Q
    ||||| |||||||||||||  ||||||| ||| |||| ||||||||| |||||||||||||||||||||||||||||||  ||| | ||||| |||  ||    
T  54093 caaacagtttaaattaaaataattaataggatctatggtggaccacttttaaggttggtccaccatagacatcatttggggttatacttaacagtcacga 54192  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaa 223  Q
    |||||||||||||||||||||||| ||||||||||||||| | ||| ||||||||||| ||||||||| ||||||||||| ||||||||| |||| || |    
T  54193 tttatttggcaaacggaggaaaatttgagggaccaaaacgcacgttttattaattgtgcgaccaaaattaaaacttgaaattatttgagggaccaatgga 54292  T
Q  224 tcaaataagccttaatt 240  Q
    |||||||||||| ||||    
T  54293 tcaaataagcctaaatt 54309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 35 - 228
Target Start/End: Complemental strand, 52787 - 52596
Alignment:
Q  35 aaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggatttatttggca 134  Q
    ||||||| || ||||||||| | ||  || ||||| | ||||||||||||||||||| ||||  ||    ||||||||||||||| ||||||||||||||    
T  52787 aaattaagaaaattaataaggtctaccatagaccatttttaaggttggtccaccatatacat--ttaaagttaaagttaactgtcgggatttatttggca 52690  T
Q  135 aacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaat-atttgaggaaccattgaatcaaa 228  Q
    ||||||| |||||||||||||||||||||||  || |||||||||||||| |||||||||||||||||| | ||| |||| ||||||||||||||    
T  52689 aacggagaaaaatctgagggaccaaaacgtacattttattaattgtgggatcaaaatgaaaacttgaaattaattagagg-accattgaatcaaa 52596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 110; Significance: 4e-55; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 25 - 234
Target Start/End: Original strand, 7311634 - 7311842
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggat 124  Q
    |||||||||||||||||||  ||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||  ||||    
T  7311634 caaacggtttaaattaaaataattaataggatttatggtggaccactcttaaggttggttcaccatagacatcatttggattaaacttaactgtgaggat 7311733  T
Q  125 ttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaat 224  Q
    ||||||||||||  ||  ||||  | ||||||||||| ||| ||| |||||||||||||| |||||||||||||| ||| ||||| ||| ||||||||||    
T  7311734 ttatttggcaaatagataaaaaagtaagggaccaaaaggtacgtt-tattaattgtgggatcaaaatgaaaacttaaaattatttaagggaccattgaat 7311832  T
Q  225 caaataagcc 234  Q
     |||||||||    
T  7311833 taaataagcc 7311842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 25 - 197
Target Start/End: Complemental strand, 17837823 - 17837651
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcattt-ggattaaagttaactgtctgga 123  Q
    ||||||||| |||||||||  ||||||| ||| |||| |||||||||||||| ||| |||||||||||||||||||| || ||||| |||||||| ||||    
T  17837823 caaacggttgaaattaaaataattaataggatctatggtggaccactcttaatgtttgtccaccatagacatcatttggggttaaacttaactgt-tgga 17837725  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaac 197  Q
    ||||||||| ||||||| |||||  |||||||| ||||||    || |||||||||||| ||||||||||||||    
T  17837724 tttatttggtaaacggaagaaaagatgagggactaaaacgccatttttattaattgtggaaccaaaatgaaaac 17837651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 25 - 196
Target Start/End: Original strand, 29381639 - 29381810
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcattt-ggattaaagttaactgtctgga 123  Q
    ||||||||| |||||||||  ||||||| ||| |||| |||| ||||||||||||| |||||||| ||||||||||| || ||||| |||||||| ||||    
T  29381639 caaacggttgaaattaaaataattaataggatctatggtggatcactcttaaggtttgtccaccacagacatcatttggggttaaacttaactgt-tgga 29381737  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaa 196  Q
    ||||||||| |||||||||||||  ||| |||| |||||||   || |||||||||||||| |||||||||||    
T  29381738 tttatttggtaaacggaggaaaagatgaaggactaaaacgtcatttttattaattgtgggatcaaaatgaaaa 29381810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 25 - 196
Target Start/End: Original strand, 18346659 - 18346830
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttg-gattaaagttaactgtctgga 123  Q
    |||||||||||||||||||  ||||||| |||||||  ||||||||||||||||||||| |||| || |||||||||| | ||||| ||||| ||| |||    
T  18346659 caaacggtttaaattaaaataattaataggatttatagtggaccactcttaaggttggttcaccgtaaacatcatttgaggttaaaattaacagtc-gga 18346757  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaa 196  Q
    |||||||||||||| |||  |||  ||||||| |||||||    || ||||||||||||||||||||||||||    
T  18346758 tttatttggcaaacagagacaaacgtgagggatcaaaacgccatttttattaattgtgggaccaaaatgaaaa 18346830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 121 - 236
Target Start/End: Original strand, 6452516 - 6452631
Alignment:
Q  121 ggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccatt 220  Q
    ||||||||||||||||||||||||||  ||||||||  ||||||| ||| |||||||| |||||||||||||||||||||||| |||||  || |||| |    
T  6452516 ggatttatttggcaaacggaggaaaaaatgagggactcaaacgtacgttttattaattatgggaccaaaatgaaaacttgaaattatttaggggaccaat 6452615  T
Q  221 gaatcaaataagcctt 236  Q
    | ||||||||||||||    
T  6452616 ggatcaaataagcctt 6452631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 30 - 197
Target Start/End: Original strand, 23397270 - 23397435
Alignment:
Q  30 ggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctggatttat 128  Q
    |||| ||||||| || ||||||||| | || | ||||| ||| ||||||||||||||||||||||||   ||| | ||||| ||||| ||| ||||||||    
T  23397270 ggttaaaattaacaaaattaataaggtatacggtggactacttttaaggttggtccaccatagacat---ttgaagttaaatttaacggtcgggatttat 23397366  T
Q  129 ttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaac 197  Q
    ||||||||||||||||||  |||||||| ||||||    || |||||||||||||||||||||||||||    
T  23397367 ttggcaaacggaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaac 23397435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 25 - 197
Target Start/End: Complemental strand, 23392421 - 23392249
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctgga 123  Q
    ||||||||| |||||||||  ||||||| ||| |||| ||||||||| ||||||||| |||||| ||| ||||||||||  ||||| |||||  |  |||    
T  23392421 caaacggttgaaattaaaataattaataggatctatggtggaccacttttaaggttgatccaccttag-catcatttggggttaaacttaacatttagga 23392323  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaac 197  Q
    |||||||||||||||||||||||  ||||||||  |||||    || |||||||||||||||||||||||||||    
T  23392322 tttatttggcaaacggaggaaaaggtgagggacttaaacgccatttttattaattgtgggaccaaaatgaaaac 23392249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 136 - 239
Target Start/End: Complemental strand, 34023982 - 34023879
Alignment:
Q  136 acggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaatcaaataagcct 235  Q
    |||||||||||  ||||||||||||| ||| ||| |||||||||||| |||||||||||||||| ||| ||||||||| ||||||  |||||||||||||    
T  34023982 acggaggaaaaggtgagggaccaaaaggtacgttttattaattgtggtaccaaaatgaaaacttaaaattatttgagggaccatttgatcaaataagcct 34023883  T
Q  236 taat 239  Q
    ||||    
T  34023882 taat 34023879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 25 - 203
Target Start/End: Original strand, 5187531 - 5187709
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggat 124  Q
    ||||| ||| ||||||| |  ||||||| ||| |||| || |||||| ||||||||||||||| ||||||| ||||||| ||||| ||||| ||| ||||    
T  5187531 caaacagttgaaattaatataattaataggatctatggtgaaccacttttaaggttggtccactatagacaacatttgggttaaacttaaccgtcaggat 5187630  T
Q  125 ttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    ||||||||||||||||  ||||  | ||| || ||||||    || |||||||| |||||||||||||||||| |||||    
T  5187631 ttatttggcaaacggacaaaaaggtaaggaactaaaacgccatttttattaattatgggaccaaaatgaaaacatgaaa 5187709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 125 - 236
Target Start/End: Original strand, 34024073 - 34024183
Alignment:
Q  125 ttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaat 224  Q
    ||||||| ||||||||||||||  ||||||| ||||| |||  || |||||||||||||||||||||||||| |||||| ||||||| ||| ||||| ||    
T  34024073 ttatttgacaaacggaggaaaaagtgagggatcaaaatgtacattttattaattgtgggaccaaaatgaaaatttgaaattatttga-gaatcattggat 34024171  T
Q  225 caaataagcctt 236  Q
    ||||||||||||    
T  34024172 caaataagcctt 34024183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 123 - 244
Target Start/End: Original strand, 15730036 - 15730158
Alignment:
Q  123 atttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttat-attaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattg 221  Q
    |||||||| ||||||||| |||||  ||||||||||||| |||| || | ||||||||||||||||||||||||| | |||| || |||||| |||| ||    
T  15730036 atttatttagcaaacggaagaaaaagtgagggaccaaaatgtatttttttattaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaatg 15730135  T
Q  222 aatcaaataagccttaatttaat 244  Q
    |||| |||||||||| |||||||    
T  15730136 aatctaataagcctttatttaat 15730158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 105 - 218
Target Start/End: Complemental strand, 232302 - 232190
Alignment:
Q  105 ttaaagttaactgtctgg-atttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    ||||||||||| || ||| ||||||||||||||||||||||||  |||||||| ||||||  |||| |||||||| ||||||||||||||||| ||||||    
T  232302 ttaaagttaacagtttgggatttatttggcaaacggaggaaaaagtgagggactaaaacg--tgttttattaattatgggaccaaaatgaaaaattgaaa 232205  T
Q  204 atatttgaggaacca 218  Q
     ||||| ||| ||||    
T  232204 ttatttaagggacca 232190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 30 - 197
Target Start/End: Complemental strand, 29380391 - 29380226
Alignment:
Q  30 ggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctggatttat 128  Q
    |||| ||||||| || ||||||||| | || ||||||| ||| ||||||||| ||||||||| ||||   ||| | ||||| ||||| ||| ||||||||    
T  29380391 ggttaaaattaacaaaattaataaggtctacgatggactacttttaaggttgatccaccatatacat---ttgaagttaaaattaacggtcgggatttat 29380295  T
Q  129 ttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaac 197  Q
    |||||||||||| |||||  |||||||| ||||||    || | |||||||||||||||||||||||||    
T  29380294 ttggcaaacggaagaaaaggtgagggactaaaacgccatttttgttaattgtgggaccaaaatgaaaac 29380226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 121 - 209
Target Start/End: Complemental strand, 6452395 - 6452307
Alignment:
Q  121 ggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatattt 209  Q
    ||||||||||||||||||||||||||  |||||||| ||||||||  || |||||||| | ||||||||| |||||||||||| |||||    
T  6452395 ggatttatttggcaaacggaggaaaaagtgagggactaaaacgtaccttttattaattataggaccaaaacgaaaacttgaaattattt 6452307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 17839128 - 17839220
Alignment:
Q  105 ttaaagttaactgtctggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaac 197  Q
    ||||| ||||| ||| ||||||||||||||||||||||||||  |||||||| ||||||    || |||||||||||||||||||||||||||    
T  17839128 ttaaaattaacggtcgggatttatttggcaaacggaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaac 17839220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 61 - 233
Target Start/End: Complemental strand, 7310445 - 7310275
Alignment:
Q  61 gatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctggatttatttggcaaacggaggaaaatctgagggaccaa 159  Q
    ||||||||| | ||||||||||| ||||||||||||   ||||| ||||| ||||| | |  ||||||||||| |||||||| |||| |||| ||||  |    
T  7310445 gatggaccatttttaaggttggttcaccatagacat---ttggagttaaacttaacagccgagatttatttggtaaacggagaaaaacctgaaggactta 7310349  T
Q  160 aacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaatcaaataagc 233  Q
    ||| || ||| |||||||| |||||||||||||||||||| ||| ||||| | | |||  || |||||||||||    
T  7310348 aacatacgttttattaattatgggaccaaaatgaaaacttaaaattatttaaaggaccgatggatcaaataagc 7310275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 31 - 196
Target Start/End: Complemental strand, 12669923 - 12669759
Alignment:
Q  31 gtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctg-gatttatt 129  Q
    ||||| ||||| || | ||||| ||| |||| ||||||||||||||||||||||||||||| ||||  ||  | ||||||||||| ||  | ||||||||    
T  12669923 gtttatattaataaaaataatatgatctatggtggaccactcttaaggttggtccaccatacacat--ttgaggttaaagttaacagttagagatttatt 12669826  T
Q  130 tggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaa 196  Q
    | |||||||||||||||  ||| |||| ||||| |  ||| ||||||||||| ||||||||| ||||    
T  12669825 tagcaaacggaggaaaaagtgacggactaaaacttgagttttattaattgtgagaccaaaataaaaa 12669759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 105 - 203
Target Start/End: Complemental strand, 5186695 - 5186597
Alignment:
Q  105 ttaaagttaactgtctggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    ||||||||||| ||| ||||||||||||||||||||||||||  ||| |||  |||||||   || ||||||||||| ||||||||||||||| |||||    
T  5186695 ttaaagttaacggtcgggatttatttggcaaacggaggaaaagatgatggattaaaacgtcacttttattaattgtgtgaccaaaatgaaaacatgaaa 5186597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 122 - 232
Target Start/End: Original strand, 27967055 - 27967165
Alignment:
Q  122 gatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattg 221  Q
    ||||| ||||||||||| |||||||  | | ||| ||||| ||||||| |||||||||||||| ||||||||||||| | || |||||| || |||||||    
T  27967055 gatttttttggcaaacgtaggaaaaattaaaggatcaaaatgtatgttctattaattgtgggatcaaaatgaaaactaggaattatttgggggaccattg 27967154  T
Q  222 aatcaaataag 232  Q
     ||||||||||    
T  27967155 gatcaaataag 27967165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 65 - 203
Target Start/End: Original strand, 32506976 - 32507113
Alignment:
Q  65 gaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtc-tggatttatttggcaaacggaggaaaatctgagggaccaaaacg 163  Q
    ||||||||||||||||||||||||||||| ||  || || ||||| ||||| |||  ||||||||||||||||| ||| ||||| |||||||| |||||     
T  32506976 gaccactcttaaggttggtccaccatagatat--ttggggttaaacttaacagtcaaggatttatttggcaaactgagaaaaatgtgagggactaaaaca 32507073  T
Q  164 tatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
        || |||||| ||||||| |||||||||||| |||||    
T  32507074 ccatttttattaaatgtgggatcaaaatgaaaacatgaaa 32507113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 2687341 - 2687259
Alignment:
Q  121 ggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    ||||||||||||||||||||||||||| ||| |||| ||||||    || |||||||||||||| |||||||||||| |||||    
T  2687341 ggatttatttggcaaacggaggaaaatgtgaaggactaaaacgccatttttattaattgtgggatcaaaatgaaaacatgaaa 2687259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 122 - 238
Target Start/End: Complemental strand, 27081034 - 27080918
Alignment:
Q  122 gatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattg 221  Q
    ||||||||| |||||||||| ||||  ||||||||  ||| |||  || ||||||||||  |||||||||||||||| |||| ||||| ||| | |||||    
T  27081034 gatttatttcgcaaacggagaaaaaagtgagggacttaaatgtaaattttattaattgtaagaccaaaatgaaaactcgaaattatttaagggatcattg 27080935  T
Q  222 aatcaaataagccttaa 238  Q
     ||||||||| ||||||    
T  27080934 gatcaaataatccttaa 27080918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 196
Target Start/End: Original strand, 6702860 - 6702950
Alignment:
Q  105 ttaaagttaactgtctggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaa 196  Q
    ||||| ||||| ||| ||||||||||||||||||||||||||  |||||||  ||||||    || ||||||||||||||||||||||||||    
T  6702860 ttaaacttaacagtcaggatttatttggcaaacggaggaaaacgtgaggga-taaaacgccatttttattaattgtgggaccaaaatgaaaa 6702950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 11967422 - 11967351
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacat 96  Q
    ||||| |||||||||||||  ||||||| ||| ||||||||||| |||| ||||||||||||| ||||||||    
T  11967422 caaacagtttaaattaaaataattaatatgatctatgatggacccctctcaaggttggtccacaatagacat 11967351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 122 - 196
Target Start/End: Complemental strand, 6701490 - 6701416
Alignment:
Q  122 gatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaa 196  Q
    |||||||||||||||||||||||||| |||||||| ||||      || ||||||||||||||||||||||||||    
T  6701490 gatttatttggcaaacggaggaaaatgtgagggactaaaataccatttttattaattgtgggaccaaaatgaaaa 6701416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 120 - 203
Target Start/End: Original strand, 2687928 - 2688011
Alignment:
Q  120 tggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    |||||||||||||||||||||  ||||  |||||||| ||||||    || ||||||||||||||| ||||||||||| |||||    
T  2687928 tggatttatttggcaaacggataaaaaggtgagggactaaaacgccatttttattaattgtgggactaaaatgaaaacatgaaa 2688011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 203
Target Start/End: Complemental strand, 29722815 - 29722692
Alignment:
Q  78 gttggtccaccatagacatcatttggattaaagttaactgtctggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaat 177  Q
    |||||||||| ||| ||||  ||||||||||| ||||| ||   ||||||||||  ||| |||||||||| |||||||| ||||||    || |||||||    
T  29722815 gttggtccacaatatacat--tttggattaaatttaacagttgagatttatttgcaaaatggaggaaaatgtgagggactaaaacgccatttttattaat 29722718  T
Q  178 tgtgggaccaaaatgaaaacttgaaa 203  Q
    | ||||| |||||||||||| |||||    
T  29722717 tatgggatcaaaatgaaaacatgaaa 29722692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 235 - 285
Target Start/End: Original strand, 32670284 - 32670334
Alignment:
Q  235 ttaatttaatgcacttatttgaagttttttaagtttttaagtatcaaatag 285  Q
    |||||||||||||  ||||||||||||| ||||||||||||| ||||||||    
T  32670284 ttaatttaatgcatctatttgaagttttctaagtttttaagtttcaaatag 32670334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 235 - 276
Target Start/End: Complemental strand, 12340695 - 12340654
Alignment:
Q  235 ttaatttaatgcacttatttgaagttttttaagtttttaagt 276  Q
    |||||||||||||||||||| | |||||||||||||||||||    
T  12340695 ttaatttaatgcacttatttaatgttttttaagtttttaagt 12340654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 233597 - 233657
Alignment:
Q  149 tgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatattt 209  Q
    |||||||| ||||||| | || |||||||| ||||||||||||||||| |||||| |||||    
T  233597 tgagggactaaaacgtgttttttattaattatgggaccaaaatgaaaaattgaaattattt 233657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 11722992 - 11722921
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacat 96  Q
    |||||||||||||||| ||  ||||||| ||| |||| ||||||| | |||| || ||||||||||||||||    
T  11722992 caaacggtttaaattagaataattaataggatctatggtggaccatttttaaagtcggtccaccatagacat 11722921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 107; Significance: 2e-53; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 25 - 233
Target Start/End: Original strand, 125140 - 125350
Alignment:
Q  25 caaacggtttaaattaaaaatatt-aataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctgg 122  Q
    |||| ||||||||||||||| ||| |||||| | |||| ||||||||| |||||||||||||| |||| |||||||||||  ||||| ||||| ||  ||    
T  125140 caaagggtttaaattaaaaaaatttaataaggtctatggtggaccacttttaaggttggtccatcatatacatcatttggggttaaacttaaccgttagg 125239  T
Q  123 atttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattga 222  Q
    ||||||||||||||||||||||||  ||||||||||||| ||| ||| |||||||||||||||||||||||||| |||||| ||||||||| |||||||     
T  125240 atttatttggcaaacggaggaaaaagtgagggaccaaaaggtacgttttattaattgtgggaccaaaatgaaaatttgaaattatttgagggaccattgg 125339  T
Q  223 atcaaataagc 233  Q
    |||||||||||    
T  125340 atcaaataagc 125350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 25 - 234
Target Start/End: Complemental strand, 124173 - 123967
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggat 124  Q
    |||||| |||||||||| ||| |||||| ||| |||| ||||||||||||||||||||||||||||||| ||  || || ||||| ||||| ||  ||||    
T  124173 caaacgatttaaattaacaat-ttaatacgatctatggtggaccactcttaaggttggtccaccatagatat--ttggggttaaacttaaccgtaaggat 124077  T
Q  125 ttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaat 224  Q
    ||||||||||||| ||||||||  ||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||| ||||||| | ||||||| ||    
T  124076 ttatttggcaaacagaggaaaaagtgagggaccaaaatgtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgaaggaccattggat 123977  T
Q  225 caaataagcc 234  Q
    ||||||||||    
T  123976 caaataagcc 123967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 107; Significance: 2e-53; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 25 - 231
Target Start/End: Original strand, 43460732 - 43460938
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggat 124  Q
    |||| ||||||||||||||  ||||||| ||| |||| |||||||||||||| ||||||||||||||||||| |||||  ||||| ||||||||  ||||    
T  43460732 caaagggtttaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatagacataatttgagttaaacttaactgtgaggat 43460831  T
Q  125 ttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaat 224  Q
    |||||||||||| |||||||||  |||||||| |||| ||| ||| ||||||||||||||||||||||||||||| |||  |||||||| | ||||||||    
T  43460832 ttatttggcaaatggaggaaaaagtgagggactaaaatgtacgttttattaattgtgggaccaaaatgaaaacttcaaataatttgagggatcattgaat 43460931  T
Q  225 caaataa 231  Q
    |||||||    
T  43460932 caaataa 43460938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 25 - 218
Target Start/End: Complemental strand, 32255197 - 32255003
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctgga 123  Q
    ||||||||| |||||||||  ||||||| ||| |||| ||||||||||||||||||||||||||||| |||||||||||  ||||| ||||| ||| |||    
T  32255197 caaacggttgaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccataaacatcatttggggttaaacttaaccgtcggga 32255098  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaacca 218  Q
    |||||||||||||||||||||||  ||||||| ||||| ||| ||| |||||||| |||||||||||| |||| |||||| ||||||||| ||||    
T  32255097 tttatttggcaaacggaggaaaaagtgagggatcaaaatgtacgttttattaattatgggaccaaaataaaaatttgaaattatttgagggacca 32255003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 25 - 234
Target Start/End: Complemental strand, 47454542 - 47454335
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggat 124  Q
    ||||||||| ||||||| || ||||||||| | || |||||||||||||||||||||||| |||||||||||  || |  ||||||||||  ||| ||||    
T  47454542 caaacggttaaaattaataaaattaataaggtctacgatggaccactcttaaggttggtctaccatagacat--ttagagttaaagttaatagtcgggat 47454445  T
Q  125 ttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaat 224  Q
    |||||||||||||| || ||||  ||||||||||||| ||| ||| ||||||||||||||||||||||||| ||||||| ||||||||| |||| || ||    
T  47454444 ttatttggcaaacgaagaaaaacttgagggaccaaaatgtacgttttattaattgtgggaccaaaatgaaagcttgaaattatttgagggaccactggat 47454345  T
Q  225 caaataagcc 234  Q
    ||||||||||    
T  47454344 caaataagcc 47454335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 25 - 238
Target Start/End: Complemental strand, 40811527 - 40811334
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggat 124  Q
    ||||||||||||||||||||||||||||  || |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||    
T  40811527 caaacggtttaaattaaaaatattaatagaatctatggtggaccactcttaaggttggtccaccatagacatcatttgggttaaagttaaccgtcaggat 40811428  T
Q  125 ttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaat 224  Q
    |||||| | | |||||||||||| ||||||                    || |||||||||||||||||||||||||| ||||||||| ||||||| ||    
T  40811427 ttatttagtatacggaggaaaatatgaggg--------------------aaatgtgggaccaaaatgaaaacttgaaattatttgagggaccattggat 40811348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 27 - 197
Target Start/End: Original strand, 13564150 - 13564320
Alignment:
Q  27 aacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctggatt 125  Q
    ||||||| |||||||||  ||||||| ||| |||| |||||||||||||||| || |||||||||||||| ||||||  ||||| ||||| ||| |||||    
T  13564150 aacggttcaaattaaaataattaataggatctatggtggaccactcttaaggatgatccaccatagacattatttggggttaaacttaac-gtcgggatt 13564248  T
Q  126 tatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaac 197  Q
    |||||||||||||||||||||| |||||||| ||||||   ||| |||||||||||||||||||||||||||    
T  13564249 tatttggcaaacggaggaaaatgtgagggactaaaacgccagttttattaattgtgggaccaaaatgaaaac 13564320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 46 - 238
Target Start/End: Original strand, 47456314 - 47456497
Alignment:
Q  46 attaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggatttatttggcaaacggaggaaa 145  Q
    ||||||||| | |||||||||||||| |||| |||| |||||||||||         | | ||||||||| |||  |||||||||||||||| || ||||    
T  47456314 attaataaggtctatgatggaccacttttaaagttgttccaccataga---------gttaaaagttaacagtcgagatttatttggcaaacagaagaaa 47456404  T
Q  146 atctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaatcaaataagccttaa 238  Q
    |  ||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||    
T  47456405 aaatgagggaccaaaaagtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggaccattggatcaaataagccttaa 47456497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 62 - 234
Target Start/End: Original strand, 32256343 - 32256513
Alignment:
Q  62 atggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctggatttatttggcaaacggaggaaaatctgagggaccaaa 160  Q
    |||||||||| |||| |||||||||||||||||||   ||| | ||||||||||| ||  | |||||||||||||| |||||||||  ||||||||||||    
T  32256343 atggaccacttttaatgttggtccaccatagacat---ttgaagttaaagttaacggttggaatttatttggcaaatggaggaaaaagtgagggaccaaa 32256439  T
Q  161 acgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaatcaaataagcc 234  Q
    | |||  || |||||||| |||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||    
T  32256440 aggtacattttattaattatgggaccaaaatgaaaacttgaaattatttgagggaccattggatcaaataagcc 32256513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 25 - 234
Target Start/End: Complemental strand, 47059317 - 47059106
Alignment:
Q  25 caaacggtttaaattaaaaata--ttaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctgg 122  Q
    |||||||||||||||||||| |  |||||||| | |||| ||| | ||||||||||||| |||||||||||| |     || ||||| ||||| ||| ||    
T  47059317 caaacggtttaaattaaaaaaaaattaataaggtctatggtgggctactcttaaggttgctccaccatagacttttggagggttaaacttaacggtcagg 47059218  T
Q  123 atttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattga 222  Q
    ||||||||||||||||||||||||  ||||||| |||||||||  || |||||||||| |||||||||||||||||| ||| || ||  || ||||||||    
T  47059217 atttatttggcaaacggaggaaaaagtgagggatcaaaacgtacattttattaattgtaggaccaaaatgaaaacttaaaattaattaggggaccattga 47059118  T
Q  223 atcaaataagcc 234  Q
    ||| ||||||||    
T  47059117 atctaataagcc 47059106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 6173454 - 6173569
Alignment:
Q  120 tggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccat 219  Q
    |||||||||||||||||||||||||||  ||||||||||||| ||| ||| |||||||| ||||  |||||||||||||||||| ||||||||| |||||    
T  6173454 tggatttatttggcaaacggaggaaaaagtgagggaccaaaatgtacgttttattaattatgggtacaaaatgaaaacttgaaattatttgagggaccat 6173553  T
Q  220 tgaatcaaataagcct 235  Q
    || |||||||||||||    
T  6173554 tggatcaaataagcct 6173569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 121 - 235
Target Start/End: Complemental strand, 33096980 - 33096866
Alignment:
Q  121 ggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccatt 220  Q
    ||||||||||||||||||||||||||  ||||||||||||| ||| ||| ||||||||||||| | ||||||| ||||||||| ||||||||| ||||||    
T  33096980 ggatttatttggcaaacggaggaaaaagtgagggaccaaaaggtaagttttattaattgtgggcctaaaatgagaacttgaaattatttgagggaccatt 33096881  T
Q  221 gaatcaaataagcct 235  Q
    | |||||||||||||    
T  33096880 ggatcaaataagcct 33096866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 25 - 233
Target Start/End: Complemental strand, 40508584 - 40508377
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtct-gga 123  Q
    ||||||||| ||||| |||| |||||| | || |||| ||||| ||||||||| ||| ||||||||||||||  || |||||||| |||||      |||    
T  40508584 caaacggttaaaatttaaaaaattaatgaaatctatggtggacaactcttaagattgatccaccatagacat--ttgggattaaacttaacaccgaagga 40508487  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaa 223  Q
    |||||||||| ||||||||||||  ||||||||  ||||||| ||| ||||||||||||||| ||||||||||||||||| |||||  || ||||||| |    
T  40508486 tttatttggctaacggaggaaaaagtgagggacttaaacgtacgttttattaattgtgggacaaaaatgaaaacttgaaattatttaggggaccattgga 40508387  T
Q  224 tcaaataagc 233  Q
    ||||||||||    
T  40508386 tcaaataagc 40508377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 27 - 197
Target Start/End: Complemental strand, 22336184 - 22336014
Alignment:
Q  27 aacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctggatt 125  Q
    ||||||| |||||||||  ||||||| ||| |||| ||||||||| ||||||||| |||||||||| ||||||||||  ||||| |||||  || |||||    
T  22336184 aacggttgaaattaaaataattaataggatctatggtggaccacttttaaggttgatccaccatag-catcatttggggttaaacttaacattcgggatt 22336086  T
Q  126 tatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaac 197  Q
    |||||||||||| ||||||||  |||||||| ||||||    || |||||||||||||||||||||||||||    
T  22336085 tatttggcaaactgaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaac 22336014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 30 - 234
Target Start/End: Complemental strand, 43459655 - 43459453
Alignment:
Q  30 ggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctggatttat 128  Q
    |||| ||||||| || ||||||||| | || |||| |||| | ||||||||| ||||||||||||||   ||||| ||||| ||||| | |  |||||||    
T  43459655 ggttaaaattaacaaaattaataaggtctacgatgtaccatttttaaggttgatccaccatagacat---ttggagttaaacttaacagccgagatttat 43459559  T
Q  129 ttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaatcaaa 228  Q
    ||||||||||||||||||  ||||||||  ||||| | ||| ||||||||||||||||||||||||||||||||| |||||  || || | || ||||||    
T  43459558 ttggcaaacggaggaaaacatgagggacttaaacgcacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaggggactaatggatcaaa 43459459  T
Q  229 taagcc 234  Q
    ||||||    
T  43459458 taagcc 43459453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 57 - 235
Target Start/End: Complemental strand, 41078931 - 41078753
Alignment:
Q  57 ttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggatttatttggcaaacggaggaaaatctgagggac 156  Q
    ||||| ||||||| | ||||| ||||||||||||| ||||||||||| ||||||||||| ||| ||||||||| |||||| |||||||||||| | |||     
T  41078931 ttatggtggaccatttttaagattggtccaccatatacatcatttgggttaaagttaaccgtcgggatttattcggcaaatggaggaaaatctaaaggat 41078832  T
Q  157 caaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaatcaaataagcct 235  Q
    |||||  ||  || ||| |||||||||||||||||||||| | |||| || |||||| ||||  | ||| |||||||||    
T  41078831 caaaagatactttttatcaattgtgggaccaaaatgaaaaatggaaattaattgagggaccagcggatctaataagcct 41078753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 58 - 234
Target Start/End: Original strand, 40509677 - 40509852
Alignment:
Q  58 tatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaact--gtctggatttatttggcaaacggaggaaaatctgaggga 155  Q
    |||| ||||||||||||||||||||||||| ||||||||  || || ||||| |||||   |  || |||||||||| |||||||||||||  ||||| |    
T  40509677 tatggtggaccactcttaaggttggtccactatagacat--ttggggttaaacttaacaccgaatg-atttatttggtaaacggaggaaaaagtgaggaa 40509773  T
Q  156 ccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaatcaaataagcc 234  Q
    |  ||||||| ||| ||||||||||||||||||||||||||||||||| |||||  || ||||||||| ||||||||||    
T  40509774 cttaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaggggaccattgaaacaaataagcc 40509852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 38 - 233
Target Start/End: Original strand, 47060400 - 47060592
Alignment:
Q  38 ttaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggatttatttggcaaac 137  Q
    |||||||| |||||||| | |||| ||||| | ||||||||||||||||||||| ||||  || |  ||||| ||||| ||| |||||||||||||||||    
T  47060400 ttaaaaat-ttaataaggtctatggtggactattcttaaggttggtccaccatatacat--ttggtgttaaacttaacagtccggatttatttggcaaac 47060496  T
Q  138 ggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaatcaaataagc 233  Q
    |||  |||   ||||||||||||||||| ||| |||||||| | |||||||||||||||||| ||| || ||  | |||||||||||| |||||||    
T  47060497 ggaaaaaagggtgagggaccaaaacgtacgttttattaattataggaccaaaatgaaaacttaaaattaattaggaaaccattgaatctaataagc 47060592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 25 - 203
Target Start/End: Original strand, 11502330 - 11502509
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttg-gattaaagttaactgtctgga 123  Q
    ||||||| | |||||||||  |||| || ||| |||| |||||||||||||||||||||| ||||||||||||||||| | ||||| ||||||||  |||    
T  11502330 caaacggctgaaattaaaataattactaggatctatggtggaccactcttaaggttggtctaccatagacatcatttgaggttaaacttaactgttggga 11502429  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    |||||||||||||| ||| ||||  |||||||| ||  || |  || |||||| ||||||| |||||||||||| |||||    
T  11502430 tttatttggcaaacagagcaaaagttgagggactaattcgcaatttttattaaatgtgggatcaaaatgaaaacatgaaa 11502509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 32603043 - 32602925
Alignment:
Q  122 gatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattg 221  Q
    |||||||||||||||||||| ||||  |||||||| |||||||| ||| |||||||| |||||||||||| ||||||||||| ||||||| | |||| ||    
T  32603043 gatttatttggcaaacggagtaaaaagtgagggactaaaacgtacgttttattaattatgggaccaaaataaaaacttgaaattatttgaaggaccaatg 32602944  T
Q  222 aatcaaataagccttaatt 240  Q
     ||||||||||||| ||||    
T  32602943 gatcaaataagcctaaatt 32602925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 40 - 203
Target Start/End: Original strand, 40812539 - 40812700
Alignment:
Q  40 aaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctggatttatttggcaaacg 138  Q
    ||||| ||||||||||| || |||||| |||| |||||||||||||||||| |   | ||||||| ||||||| ||| ||| |||| |||||| |||||     
T  40812539 aaaaaaattaataagatctacgatggatcacttttaaggttggtccaccatgg---ttatttggagttaaagtaaacagtcgggatatatttgacaaaca 40812635  T
Q  139 gaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    ||||||||| ||||||| ||||||||| ||| |||||||| ||| |||||||||||||| |||||    
T  40812636 gaggaaaatatgagggagcaaaacgtacgttttattaattatggaaccaaaatgaaaacatgaaa 40812700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 121 - 235
Target Start/End: Complemental strand, 45454149 - 45454035
Alignment:
Q  121 ggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccatt 220  Q
    ||||||||||||||||||||||||||  |||||||| |||||||||||| |||||||| || ||||||||||||||| ||||| || ||  || ||||||    
T  45454149 ggatttatttggcaaacggaggaaaaagtgagggactaaaacgtatgttttattaattatgagaccaaaatgaaaacgtgaaattaattaggggaccatt 45454050  T
Q  221 gaatcaaataagcct 235  Q
     ||||||||||||||    
T  45454049 taatcaaataagcct 45454035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 82 - 235
Target Start/End: Complemental strand, 30310270 - 30310118
Alignment:
Q  82 gtccaccatagacatcatttggattaaagttaactgtctgg-atttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgt 180  Q
    |||||||||||||||  || || ||||  ||||| |||||| ||||||||||||||||||||||||  ||||| ||  ||| ||| ||| ||||||||||    
T  30310270 gtccaccatagacat--ttggggttaactttaacagtctgggatttatttggcaaacggaggaaaaaatgaggaactcaaatgtacgttttattaattgt 30310173  T
Q  181 gggaccaaaatgaaaacttgaaaatatttgaggaaccattgaatcaaataagcct 235  Q
    ||||| ||||||||||||||||| ||||| ||| || |||| |||||||||||||    
T  30310172 gggacaaaaatgaaaacttgaaattatttaagggactattggatcaaataagcct 30310118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 30 - 203
Target Start/End: Complemental strand, 11501380 - 11501209
Alignment:
Q  30 ggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctggatttat 128  Q
    |||| ||||||| || ||||||||| | ||  ||| |||||| ||||||||||||||||||||||||   ||| | ||||||||||| ||| ||||||||    
T  11501380 ggttaaaattaacaaaattaataaggtctacaatgaaccacttttaaggttggtccaccatagacat---ttgaagttaaagttaacagtcgggatttat 11501284  T
Q  129 ttggcaaacggaggaaaatctgagggaccaaaacg-tatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    |||||||| |||||||||  |||||||| |||| | ||| || |||||| |||||||||||||||||||| |||||    
T  11501283 ttggcaaatggaggaaaaggtgagggactaaaatgctat-ttttattaactgtgggaccaaaatgaaaacatgaaa 11501209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 58 - 234
Target Start/End: Original strand, 22115107 - 22115283
Alignment:
Q  58 tatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtct-ggatttatttggcaaacggaggaaaatctgagggac 156  Q
    |||| ||||||||||||||||||||||||| ||||||||  || || ||||| |||||       |||||||||||  ||||||||||||  ||||| ||    
T  22115107 tatggtggaccactcttaaggttggtccactatagacat--ttggggttaaacttaacaccgaangatttatttggtnaacggaggaaaaagtgaggaac 22115204  T
Q  157 caaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttga-ggaaccattgaatcaaataagcc 234  Q
      ||||||| ||| ||||||||||||||||||||||||||||||||| ||||| | || ||||||||| ||||||||||    
T  22115205 ttaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattattttaggggaccattgaaacaaataagcc 22115283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 4300054 - 4300166
Alignment:
Q  122 gatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattg 221  Q
    |||||||||||||||| ||||||||  ||||||||  ||||||| ||| ||||||||||||||||||||||||||||||||| ||||   || || ||||    
T  4300054 gatttatttggcaaacagaggaaaaagtgagggacttaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattattcaggggacgattg 4300153  T
Q  222 aatcaaataagcc 234  Q
     ||||||||||||    
T  4300154 gatcaaataagcc 4300166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 25 - 196
Target Start/End: Complemental strand, 22537766 - 22537595
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttg-gattaaagttaactgtctgga 123  Q
    |||||||||||||||||||  ||||||| ||| |||| |||| |||| ||||||||||| |||| || |||||||||| | ||||| ||||| || ||||    
T  22537766 caaacggtttaaattaaaataattaataggatctatggtggatcactattaaggttggttcaccgtaaacatcatttgaggttaaaattaacagt-tgga 22537668  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaa 196  Q
    |||||||||||||| |||  |||  ||||||| ||||| ||   || || |||||||||||||||||||||||    
T  22537667 tttatttggcaaacagagacaaacgtgagggatcaaaatgtcatttttagtaattgtgggaccaaaatgaaaa 22537595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 46 - 218
Target Start/End: Original strand, 41079767 - 41079936
Alignment:
Q  46 attaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctggatttatttggcaaacggaggaa 144  Q
    ||||||||| | || ||||||||||| |||| |||| ||||||||||| ||   ||||| ||||||||||| ||  |||||||||| |||||||||||||    
T  41079767 attaataaggtctacgatggaccacttttaatgttgttccaccatagatat---ttggagttaaagttaacggtagggatttatttagcaaacggaggaa 41079863  T
Q  145 aatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaacca 218  Q
    ||  | ||||||||||||||| ||| |||| |||||||||||||||| |||| | |||| || |||||| ||||    
T  41079864 aagataagggaccaaaacgtacgttttatt-attgtgggaccaaaataaaaaatggaaattaattgagggacca 41079936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 122 - 233
Target Start/End: Original strand, 45455378 - 45455489
Alignment:
Q  122 gatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattg 221  Q
    |||||||||||||||||||| ||||  ||||||| ||||| ||| ||| |||||||||||||||||||||||||| |||||| || || ||| ||||| |    
T  45455378 gatttatttggcaaacggagaaaaaagtgagggatcaaaatgtacgttttattaattgtgggaccaaaatgaaaatttgaaattaattaagggaccatcg 45455477  T
Q  222 aatcaaataagc 233  Q
     |||||||||||    
T  45455478 gatcaaataagc 45455489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 27 - 203
Target Start/End: Original strand, 30334554 - 30334724
Alignment:
Q  27 aacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctgga-tt 125  Q
    |||||||||||||||||| ||||||| ||| |||| |||||   |||||| |||||||| ||||||||||  || |  ||| | ||||| || |||| ||    
T  30334554 aacggtttaaattaaaaa-attaataggatctatggtggactgttcttaaagttggtcctccatagacat--ttagagttagatttaacggtttggaatt 30334650  T
Q  126 tatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    ||||||||||||||||| |    ||||||||||||| ||| ||| ||||||||||||||| |||||||||||||||||    
T  30334651 tatttggcaaacggaggga----tgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaacttgaaa 30334724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 122 - 209
Target Start/End: Complemental strand, 30333395 - 30333308
Alignment:
Q  122 gatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatattt 209  Q
    |||||||||| ||||||||| ||||  |||||||||||||  || ||| ||||||||||||||||||||||||||||||||| |||||    
T  30333395 gatttatttgacaaacggagaaaaaaatgagggaccaaaagatacgttttattaattgtgggaccaaaatgaaaacttgaaattattt 30333308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 105 - 203
Target Start/End: Original strand, 22538837 - 22538935
Alignment:
Q  105 ttaaagttaactgtctggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    ||||||||||| |||  |||||||||||||||||||||||||  |||||||| |||||||   || |||||||||||||||||||| |||||| |||||    
T  22538837 ttaaagttaaccgtcgagatttatttggcaaacggaggaaaagatgagggactaaaacgtcatttttattaattgtgggaccaaaaagaaaacatgaaa 22538935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 121 - 234
Target Start/End: Original strand, 30311474 - 30311587
Alignment:
Q  121 ggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccatt 220  Q
    ||||||| ||||| ||| ||| ||||  ||||||||  ||||||||||| |||||||||||||||||||||||||| |||||| |||||  || || | |    
T  30311474 ggatttaattggctaacagagaaaaaaatgagggacttaaacgtatgttttattaattgtgggaccaaaatgaaaatttgaaattatttaggggactaat 30311573  T
Q  221 gaatcaaataagcc 234  Q
    | ||||||||||||    
T  30311574 ggatcaaataagcc 30311587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 105 - 236
Target Start/End: Complemental strand, 22690495 - 22690363
Alignment:
Q  105 ttaaagttaactgtctg-gatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    ||||| ||||||||| | |||||||||||||||| | |||||| | ||| |||||||||| |  || |||||||||||| || ||||||||||||| |      
T  22690495 ttaaaattaactgtccgagatttatttggcaaacaggggaaaacccgagagaccaaaacggaacttttattaattgtggaacaaaaatgaaaacttaagg 22690396  T
Q  204 atatttgaggaaccattgaatcaaataagcctt 236  Q
     ||||| |||||||| ||||| |||||||||||    
T  22690395 ttatttaaggaaccaatgaattaaataagcctt 22690363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 24282980 - 24283091
Alignment:
Q  120 tggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccat 219  Q
    |||||||||||||||||||||||||||| |||||||| ||| ||  |||| | |||||||||| |||||||||||||  ||||| ||||||  ||||||     
T  24282980 tggatttatttggcaaacggaggaaaatgtgagggactaaagcgcctgtt-ttttaattgtggaaccaaaatgaaaatctgaaattatttggagaaccaa 24283078  T
Q  220 tgaatcaaataag 232  Q
     | ||||||||||    
T  24283079 cggatcaaataag 24283091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 35295905 - 35295841
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccacca 89  Q
    |||||||||||||||||||  ||||||| ||| |||| |||||||||||||||||||||||||||    
T  35295905 caaacggtttaaattaaaataattaataggatctatggtggaccactcttaaggttggtccacca 35295841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 4298823 - 4298710
Alignment:
Q  122 gatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattg 221  Q
    |||||||||||||||| ||||||||  ||||||||  ||||  |  || |||||||||||||| |||||| ||||||| ||| |||||  || |||||||    
T  4298823 gatttatttggcaaacagaggaaaaagtgagggacttaaacccacattttattaattgtgggatcaaaataaaaacttaaaattatttaggggaccattg 4298724  T
Q  222 aatcaaataagcct 235  Q
     |||||||||||||    
T  4298723 gatcaaataagcct 4298710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 73 - 203
Target Start/End: Original strand, 22337330 - 22337457
Alignment:
Q  73 ttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttat 171  Q
    ||||||||||||||||||||||||   ||| | ||||| ||||| ||| ||||||||||||||||||||||||||| | ||||||  ||    || || |    
T  22337330 ttaaggttggtccaccatagacat---ttgaagttaaatttaacggtcaggatttatttggcaaacggaggaaaatgtaagggactgaatgccat-tttt 22337425  T
Q  172 attaattgtgggaccaaaatgaaaacttgaaa 203  Q
    ||||||||||||| |||||||||||| |||||    
T  22337426 attaattgtgggatcaaaatgaaaacatgaaa 22337457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 122 - 208
Target Start/End: Complemental strand, 11344614 - 11344531
Alignment:
Q  122 gatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatt 208  Q
    |||||||||| ||||||||| |||   ||| ||||  ||||||| ||| ||||||||||||||||||||||||||||||||| ||||    
T  11344614 gatttatttgacaaacggagaaaa---tgaaggacttaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattatt 11344531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 235 - 315
Target Start/End: Original strand, 44933507 - 44933587
Alignment:
Q  235 ttaatttaatgcacttatttgaagttttttaagtttttaagtatcaaataggtctttaaaaggttaacaaagacctatttg 315  Q
    ||||||||||||| |||||||||||||||||||||||||  | | ||||||||| |||||||| | | || ||||||||||    
T  44933507 ttaatttaatgcatttatttgaagttttttaagtttttatattttaaataggtcattaaaaggatgataaggacctatttg 44933587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 669299 - 669369
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacat 96  Q
    ||||||||||||||||| || ||||||| ||| |||| |||||||||||||| | |||||||||||||||||    
T  669299 caaacggtttaaattaacaaaattaataggatctatggtggaccactcttaa-gatggtccaccatagacat 669369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 2414951 - 2414880
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacat 96  Q
    ||||||||||||||||| || ||||||| ||| |||| ||||||||| ||||||||||||||  ||||||||    
T  2414951 caaacggtttaaattaagaaaattaataggatctatggtggaccacttttaaggttggtccattatagacat 2414880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 64 - 235
Target Start/End: Original strand, 33779036 - 33779203
Alignment:
Q  64 ggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctg-gatttatttggcaaacggaggaaaatctgagggaccaaaac 162  Q
    |||||||||||||||||||||||||||||||||  ||  | ||||| ||||| | |   |||||||| ||    ||||||||||   ||||||| |||||    
T  33779036 ggaccactcttaaggttggtccaccatagacat--ttgtggttaaacttaacagccaaagatttattgggg---cggaggaaaaagcgagggactaaaac 33779130  T
Q  163 gtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaatcaaataagcct 235  Q
    ||  ||| ||||||||||||| ||||||||||||||||||| |||||  || || | || |||||||||||||    
T  33779131 gtgagttttattaattgtggggccaaaatgaaaacttgaaattatttaggggactaatggatcaaataagcct 33779203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 43441552 - 43441481
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacat 96  Q
    ||||| ||||| |||||||  ||||||| || ||||| ||||||||||||||||||||| ||||||||||||    
T  43441552 caaacagtttacattaaaataattaataggacttatggtggaccactcttaaggttggtacaccatagacat 43441481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 46201337 - 46201266
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacat 96  Q
    ||||| ||||| |||||||  ||||||| ||| |||| ||||||||||||||||||||| ||||||||||||    
T  46201337 caaacagtttatattaaaataattaatatgatctatggtggaccactcttaaggttggttcaccatagacat 46201266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 235 - 315
Target Start/End: Original strand, 1461314 - 1461394
Alignment:
Q  235 ttaatttaatgcacttatttgaagttttttaagtttttaagtatcaaataggtctttaaaaggttaacaaagacctatttg 315  Q
    ||||||||||| | |||||||| ||||||||||||||||  | | ||||||||| |||||||| ||| || ||||||||||    
T  1461314 ttaatttaatgaatttatttgaggttttttaagtttttagcttttaaataggtccttaaaagggtaataaggacctatttg 1461394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 197
Target Start/End: Complemental strand, 3413738 - 3413567
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctgg- 122  Q
    ||||||||| ||||| |||| |||||| |  | |||| ||||| ||||||||| ||| |||||||||||||||   || | ||||| ||||| ||  ||     
T  3413738 caaacggttaaaatttaaaaaattaatgaagtctatggtggacaactcttaagattgatccaccatagacatc---tgaagttaaacttaacagttaggg 3413642  T
Q  123 atttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaac 197  Q
    ||||||||||||||| ||| ||||  |||||||| ||||||    || |||||||||| ||||||||||||||||    
T  3413641 atttatttggcaaacagagtaaaaggtgagggactaaaacgccatttttattaattgtaggaccaaaatgaaaac 3413567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 121 - 209
Target Start/End: Original strand, 3414839 - 3414927
Alignment:
Q  121 ggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatattt 209  Q
    |||||||||||||||| |||||||||  ||| |||| ||||||    || |||||||| |||||||||||||||||| ||||| |||||    
T  3414839 ggatttatttggcaaatggaggaaaaagtgaaggactaaaacgccatttttattaattatgggaccaaaatgaaaacatgaaattattt 3414927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 44372935 - 44372864
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacat 96  Q
    |||||||||| ||||||||  ||||||| ||| |||| |||||||||||||| ||| |||||| ||||||||    
T  44372935 caaacggttttaattaaaataattaataggatctatggtggaccactcttaatgttagtccactatagacat 44372864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 44381791 - 44381720
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacat 96  Q
    |||||||||| ||||||||  ||||||| ||| |||| |||||||||||||| ||| |||||| ||||||||    
T  44381791 caaacggttttaattaaaataattaataggatctatggtggaccactcttaatgttagtccactatagacat 44381720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 197
Target Start/End: Complemental strand, 13562986 - 13562857
Alignment:
Q  66 accactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctggatttatttggcaaacggaggaaaatctgagggaccaaaacgt 164  Q
    |||||| ||||||||||||||  ||||||||   ||| | |||||||||||  || |||||||||||| |||| ||| ||||| |||||||| ||||||     
T  13562986 accacttttaaggttggtccattatagacat---ttgaagttaaagttaacaatcgggatttatttggtaaacagagaaaaatgtgagggactaaaacgc 13562890  T
Q  165 atgttatattaattgtgggaccaaaatgaaaac 197  Q
       || ||||| ||||||||||||||| |||||    
T  13562889 catttttattacttgtgggaccaaaataaaaac 13562857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 121 - 209
Target Start/End: Complemental strand, 24281186 - 24281097
Alignment:
Q  121 ggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttat-attaattgtgggaccaaaatgaaaacttgaaaatattt 209  Q
    ||||||||||||| ||||||  ||||  |||||||| ||||||  |||| | |||||||||||||||||||| ||||| ||||| |||||    
T  24281186 ggatttatttggcgaacggataaaaaattgagggactaaaacgcttgtttttattaattgtgggaccaaaataaaaacatgaaattattt 24281097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 203
Target Start/End: Original strand, 40738842 - 40738926
Alignment:
Q  120 tggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatg-ttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    |||||||||||||||||| ||| ||||  |||||||| ||||||  || || |||||||| |||||||||||| ||||| |||||    
T  40738842 tggatttatttggcaaacagagcaaaaagtgagggactaaaacgcctgtttttattaattatgggaccaaaataaaaacatgaaa 40738926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 39981523 - 39981452
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacat 96  Q
    |||||||||||||||| ||  ||||||  ||| |||| ||||||| | |||| |||||||||||||||||||    
T  39981523 caaacggtttaaattagaataattaattggatctatggtggaccatttttaaagttggtccaccatagacat 39981452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 41328425 - 41328354
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacat 96  Q
    |||||||||||||||| ||  ||||||| ||| |||| ||||||| | |||| |||| ||||||||||||||    
T  41328425 caaacggtttaaattagaataattaataggatctatggtggaccatttttaaagttgttccaccatagacat 41328354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 11274481 - 11274535
Alignment:
Q  324 cttaaaatactaacatgatgtttttattaaagttaaatgaccaaaagaggtattt 378  Q
    ||||||||||||||||||| ||||| | ||| |||||||| ||||| ||||||||    
T  11274481 cttaaaatactaacatgatatttttgtcaaatttaaatgatcaaaataggtattt 11274535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 297
Target Start/End: Original strand, 18880420 - 18880481
Alignment:
Q  235 ttaatttaatgcacttatttgaagttttttaagtttttaagtatcaaataggtctttaaaagg 297  Q
    ||||||||||||| ||||||||| |||||||||||||||| | | ||||| ||| ||||||||    
T  18880420 ttaatttaatgca-ttatttgaacttttttaagtttttaattttaaaatatgtcgttaaaagg 18880481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 121 - 163
Target Start/End: Complemental strand, 24844372 - 24844330
Alignment:
Q  121 ggatttatttggcaaacggaggaaaatctgagggaccaaaacg 163  Q
    |||||||||||||||||||| |||||| |||||||| ||||||    
T  24844372 ggatttatttggcaaacggaagaaaatgtgagggactaaaacg 24844330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 35664287 - 35664361
Alignment:
Q  122 gatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaa 196  Q
    ||||| ||||||||||||||  ||| || ||||||||||| |||| || ||||| || ||||| |||||||||||    
T  35664287 gatttttttggcaaacggagataaaactaagggaccaaaaggtattttttattacttatgggatcaaaatgaaaa 35664361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 304
Target Start/End: Complemental strand, 38831856 - 38831787
Alignment:
Q  235 ttaatttaatgcacttatttgaagttttttaagtttttaagtatcaaataggtctttaaaaggttaacaa 304  Q
    ||||||||||| || |||||||| |||||||||||||||||  ||||| |  || |||||||| ||||||    
T  38831856 ttaatttaatgaacctatttgaatttttttaagtttttaagcttcaaacaaatccttaaaaggataacaa 38831787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 68 - 96
Target Start/End: Complemental strand, 15992298 - 15992270
Alignment:
Q  68 cactcttaaggttggtccaccatagacat 96  Q
    |||||||||||||||||||||||||||||    
T  15992298 cactcttaaggttggtccaccatagacat 15992270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 151 - 203
Target Start/End: Complemental strand, 38539752 - 38539700
Alignment:
Q  151 agggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    |||||||||||| |  ||| ||||| || ||||||||||||||||||||||||    
T  38539752 agggaccaaaacatgagttttattatttatgggaccaaaatgaaaacttgaaa 38539700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 235 - 315
Target Start/End: Original strand, 38919567 - 38919647
Alignment:
Q  235 ttaatttaatgcacttatttgaagttttttaagtttttaagtatcaaataggtctttaaaaggttaacaaagacctatttg 315  Q
    ||||||||||||   ||||| ||| ||||||| ||||||||| ||||||||||  |||||| | ||| ||| |||||||||    
T  38919567 ttaatttaatgcgtatatttaaagatttttaaatttttaagtttcaaataggttcttaaaatggtaataaaaacctatttg 38919647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 105; Significance: 4e-52; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 25 - 236
Target Start/End: Original strand, 45584917 - 45585129
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggatt-aaagttaactgtctgga 123  Q
    |||||| |||| |||||||  ||||||| ||| |||| |||| ||||||||| ||||| |||||||||||||||||||| || ||| ||||| ||| |||    
T  45584917 caaacgatttatattaaaataattaataggatctatggtggagcactcttaaagttgggccaccatagacatcatttgggtttaaacttaacggtcagga 45585016  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaa 223  Q
    |||||||||||||||||||||||  ||| ||||||||| ||| ||| ||||||||||| ||||||||||||||||||||| ||||||||| || |||| |    
T  45585017 tttatttggcaaacggaggaaaaagtgaaggaccaaaaggtacgttttattaattgtgagaccaaaatgaaaacttgaaattatttgagggactattgga 45585116  T
Q  224 tcaaataagcctt 236  Q
    |||||||||||||    
T  45585117 tcaaataagcctt 45585129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 25 - 234
Target Start/End: Original strand, 50444609 - 50444816
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctgga 123  Q
    ||||||||| |||| || || ||||||||| | || ||||||| |||||||||||||||||| ||||||| |  |||||| ||||||||||| || ||||    
T  50444609 caaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaacatagacgt--tttggagttaaagttaacggtttgga 50444705  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaa 223  Q
    |||||||||||| ||||||||||  ||||||||||||| ||| ||| ||||||||||||||| |||||||||| |||||| ||||||||| |||||||||    
T  50444706 tttatttggcaatcggaggaaaaaatgagggaccaaaatgtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaa 50444805  T
Q  224 tcaaataagcc 234  Q
    |||||||||||    
T  50444806 tcaaataagcc 50444816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 63 - 235
Target Start/End: Original strand, 15072738 - 15072909
Alignment:
Q  63 tggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtc-tggatttatttggcaaacggaggaaaatctgagggaccaaaa 161  Q
    |||||||||||| |||||||||||||||||||||  ||  | ||||||||||| | | |||||||||||||||||||||||||||  | |||||||||||    
T  15072738 tggaccactctttaggttggtccaccatagacat--ttgaggttaaagttaacagacatggatttatttggcaaacggaggaaaaaataagggaccaaaa 15072835  T
Q  162 cgtatgttatattaattgtgggaccaaaatgaaaacttgaaaat-atttgaggaaccattgaatcaaataagcct 235  Q
     ||| ||| ||||||||||||||||||||||||||||||||| | ||| |||| |||||||||||||||||||||    
T  15072836 tgtacgttttattaattgtgggaccaaaatgaaaacttgaaattaattagagg-accattgaatcaaataagcct 15072909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 26 - 234
Target Start/End: Complemental strand, 27814497 - 27814290
Alignment:
Q  26 aaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaa-gttaactgtctggat 124  Q
    |||||||| ||||||| || ||||||||| |||| ||||||||||| |||| |||||||||||||||||||  || |  ||||| |||||| ||| ||||    
T  27814497 aaacggttaaaattaacaaaattaataaggtttacgatggaccacttttaaagttggtccaccatagacat--ttagagttaaaagttaaccgtcgggat 27814400  T
Q  125 ttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaat 224  Q
    ||||||||||||| ||||||||  ||||||||||||| ||| ||| |||||||| | |||| ||||||||||||||||| ||||||||| |  |||| |     
T  27814399 ttatttggcaaacagaggaaaaaatgagggaccaaaaggtacgttttattaattataggactaaaatgaaaacttgaaattatttgagggatgattggaa 27814300  T
Q  225 caaataagcc 234  Q
    ||||||||||    
T  27814299 caaataagcc 27814290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 25 - 203
Target Start/End: Complemental strand, 15232959 - 15232781
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggat 124  Q
    ||||||||| | |||||||  ||||||| ||| |||||||||||||| |||| |||||||||| ||| ||||||||||| ||||| ||||| |||  |||    
T  15232959 caaacggttgatattaaaataattaataggatctatgatggaccacttttaaagttggtccactatatacatcatttgggttaaacttaacggtcatgat 15232860  T
Q  125 ttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    ||||||||||||| ||||||||| |||||||| ||||||    || |||||||| |||||||||||||||||| |||||    
T  15232859 ttatttggcaaacagaggaaaatgtgagggactaaaacgccatttttattaattatgggaccaaaatgaaaacatgaaa 15232781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 46 - 235
Target Start/End: Original strand, 46111427 - 46111607
Alignment:
Q  46 attaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggatttatttggcaaacggaggaaa 145  Q
    ||||||||||| ||| |||||||||| |||| |||| |||||||||||         | | ||||||||| ||| |||||||||||||||||| ||||||    
T  46111427 attaataagatctatcatggaccacttttaaagttgatccaccataga---------gttaaaagttaacagtcgggatttatttggcaaacgaaggaaa 46111517  T
Q  146 atctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaatcaaataagcct 235  Q
    |  ||||| ||||||| ||| ||| ||||||||||||||||||||| ||||||||||| ||||| ||| |||||||||||||||||||||    
T  46111518 aaatgaggaaccaaaaggtacgttttattaattgtgggaccaaaataaaaacttgaaattatttaagggaccattgaatcaaataagcct 46111607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 25 - 238
Target Start/End: Complemental strand, 14471062 - 14470850
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtct-gga 123  Q
    ||||||||  ||||| |||| |||||| |  |||||| ||||||||||||||||||||||||| |||||| |  || || ||||| |||||      |||    
T  14471062 caaacggtcaaaatttaaaaaattaatgaagtttatggtggaccactcttaaggttggtccactatagacgt--ttggggttaaacttaacaccgaagga 14470965  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaa 223  Q
    ||||||||||||||| |||||||  ||||||||  || |||| ||| ||||||||||||||||||||||||||||||||| |||||  || ||||||| |    
T  14470964 tttatttggcaaacgaaggaaaaagtgagggacttaaccgtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaggggaccattgga 14470865  T
Q  224 tcaaataagccttaa 238  Q
    |||||||||||||||    
T  14470864 tcaaataagccttaa 14470850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 24 - 196
Target Start/End: Original strand, 16965034 - 16965207
Alignment:
Q  24 acaaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcattt-ggattaaagttaactgtctgg 122  Q
    |||||||||| |||||||||  ||||||| ||| |||| |||||||||||||| |||||||||||||| ||||||||| || ||||| |||||  || |     
T  16965034 acaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccatcgga 16965133  T
Q  123 atttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaa 196  Q
    |||||||||  ||||||| |||||| | |||||| |||||||   || ||||||||||||||||||||||||||    
T  16965134 atttatttgataaacggaagaaaatgtaagggactaaaacgtcatttttattaattgtgggaccaaaatgaaaa 16965207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 32 - 232
Target Start/End: Original strand, 35943364 - 35943563
Alignment:
Q  32 tttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctgg--atttatt 129  Q
    |||||| ||||||  |||||||| | |||| |||| |||||||||||||||||||||||||||||  || || ||||| ||||| | | ||  |||||||    
T  35943364 tttaaaataaaaaatttaataaggtctatggtggatcactcttaaggttggtccaccatagacat--ttagggttaaacttaacagccaggggatttatt 35943461  T
Q  130 tggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaatcaaat 229  Q
    ||||||||| |||||||  ||||| ||||||| ||| ||| ||||||||||||||||||||| |||| |||||| ||||| ||  |||||| ||||||||    
T  35943462 tggcaaacgaaggaaaaagtgagg-accaaaatgtacgttttattaattgtgggaccaaaataaaaatttgaaattatttaagagaccattaaatcaaat 35943560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 30 - 203
Target Start/End: Complemental strand, 16964034 - 16963863
Alignment:
Q  30 ggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggatttatt 129  Q
    |||| ||||||| || ||||||||| | |||||||||||||| |||||||||||||| |||| ||||  || |  ||||||||||| ||| | |||||||    
T  16964034 ggttaaaattaacaaaattaataaggtctatgatggaccacttttaaggttggtccatcataaacat--ttagagttaaagttaacagtcagcatttatt 16963937  T
Q  130 tggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    |||||||||||||||||  |||||||| |||||     || ||||||||||||||||||||||||||| |||||    
T  16963936 tggcaaacggaggaaaagatgagggactaaaacaccatttttattaattgtgggaccaaaatgaaaacatgaaa 16963863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 123 - 244
Target Start/End: Complemental strand, 52627625 - 52627503
Alignment:
Q  123 atttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttat-attaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattg 221  Q
    |||| |||||||||||||||||||  | | || |||||| ||||||| | |||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  52627625 atttttttggcaaacggaggaaaaattaaaggtccaaaatgtatgtttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggaccattg 52627526  T
Q  222 aatcaaataagccttaatttaat 244  Q
     |||||||||||||||| |||||    
T  52627525 gatcaaataagccttaagttaat 52627503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 25 - 235
Target Start/End: Original strand, 34351875 - 34352075
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggat 124  Q
    |||| |||| |||||| ||||||||||||| |||||| ||||||||||||||| |||||||||||||||| ||       ||||  |||||  || ||||    
T  34351875 caaagggttaaaattagaaatattaataaggtttatggtggaccactcttaag-ttggtccaccatagac-tc-------ttaagtttaaccatcaggat 34351965  T
Q  125 ttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaat 224  Q
    || |||| |||||| |||||||  ||||||||||||| |||  || ||||||||||||||||||||||||||||| ||| ||||| ||| || |||| ||    
T  34351966 tt-tttgacaaacgtaggaaaaagtgagggaccaaaaggtacattttattaattgtgggaccaaaatgaaaacttaaaattatttaagggactattggat 34352064  T
Q  225 caaataagcct 235  Q
    |||||||||||    
T  34352065 caaataagcct 34352075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 122 - 243
Target Start/End: Original strand, 52628879 - 52629000
Alignment:
Q  122 gatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattg 221  Q
    |||||||||||||||||||||||||  ||||||||||||| ||| ||| ||||||||||||||||||||| ||||||||||| ||||| ||| |||  |     
T  52628879 gatttatttggcaaacggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggaccaaaattaaaacttgaaattatttaagggaccgata 52628978  T
Q  222 aatcaaataagccttaatttaa 243  Q
     |||||||||||| ||| ||||    
T  52628979 gatcaaataagccataacttaa 52629000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 65 - 203
Target Start/End: Original strand, 49802846 - 49802982
Alignment:
Q  65 gaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggatttatttggcaaacggaggaaaatctgagggaccaaaacgt 164  Q
    ||||||| ||||||||||| ||||||||||||  || |  || |||||||| ||| ||||||||||||||||||||| ||||  |||||||| |||||||    
T  49802846 gaccacttttaaggttggtacaccatagacat--ttagagttgaagttaaccgtcgggatttatttggcaaacggagaaaaagatgagggactaaaacgt 49802943  T
Q  165 atgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
       || ||||||||||||||||||||||||||| |||||    
T  49802944 catttttattaattgtgggaccaaaatgaaaacatgaaa 49802982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 121 - 235
Target Start/End: Original strand, 24499660 - 24499774
Alignment:
Q  121 ggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccatt 220  Q
    |||||||||||| |||||||||||||  ||||||||||||||||  ||| ||||||||||| ||||||||||||||||||||| |||||  || ||||      
T  24499660 ggatttatttggtaaacggaggaaaaagtgagggaccaaaacgtgagttttattaattgtgagaccaaaatgaaaacttgaaattatttaggggaccaac 24499759  T
Q  221 gaatcaaataagcct 235  Q
     ||||||||||||||    
T  24499760 aaatcaaataagcct 24499774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 25 - 177
Target Start/End: Complemental strand, 46110487 - 46110337
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggat 124  Q
    ||||||||| ||||||| || ||||||||| | || ||||||||||||||||||||||||||||||||| ||  || |  ||||||||||| |||  |||    
T  46110487 caaacggttaaaattaacaaaattaataaggtctacgatggaccactcttaaggttggtccaccatagatat--ttagagttaaagttaacagtcgagat 46110390  T
Q  125 ttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaat 177  Q
    |||||| |||||||||| ||||  |||| |||||||| ||| ||| |||||||    
T  46110389 ttatttagcaaacggagaaaaacttgagtgaccaaaaagtacgttttattaat 46110337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 30 - 235
Target Start/End: Complemental strand, 16123488 - 16123284
Alignment:
Q  30 ggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctgg-atttat 128  Q
    |||||||| ||||||| |||||||| | |||| |||| |||| |||| ||||||| |||||||||||  ||  ||||||| |||||   | || ||||||    
T  16123488 ggtttaaactaaaaattttaataaggtatatggtggatcacttttaaagttggtctaccatagacat--ttgagattaaacttaacaaccagggatttat 16123391  T
Q  129 ttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatattt-gaggaaccattgaatcaa 227  Q
    |||||||||||| |||||  |||||||| |||||||   || |||||||||||| |||||||||||||||| ||| ||||| |||| | || ||||||||    
T  16123390 ttggcaaacggaagaaaaaatgagggactaaaacgtgaattttattaattgtggaaccaaaatgaaaactttaaattatttagagg-atcaatgaatcaa 16123292  T
Q  228 ataagcct 235  Q
    ||||||||    
T  16123291 ataagcct 16123284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 25 - 196
Target Start/End: Complemental strand, 49801824 - 49801653
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttg-gattaaagttaactgtctgga 123  Q
    |||||||||||||||||||  |||||||  ||||||| ||||||||| |||||||||||  ||| || |||||||||| | ||||| ||||| ||| |||    
T  49801824 caaacggtttaaattaaaataattaatagaatttatggtggaccacttttaaggttggtttaccgtaaacatcatttgaggttaaaattaacagtc-gga 49801726  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaa 196  Q
    |||||||||||||| |||  |||  ||||||| ||||||     || ||||||||||||||||||||||||||    
T  49801725 tttatttggcaaacagagacaaacgtgagggatcaaaacaccatttttattaattgtgggaccaaaatgaaaa 49801653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 121 - 244
Target Start/End: Original strand, 14477796 - 14477919
Alignment:
Q  121 ggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccatt 220  Q
    ||||||||||||||||||||| ||||  ||||||||  ||||||| ||| |||||||||||||| |||| ||||||||| ||| |||||  || ||||||    
T  14477796 ggatttatttggcaaacggagaaaaaagtgagggacttaaacgtacgttttattaattgtgggatcaaagtgaaaacttaaaattatttatgggaccatt 14477895  T
Q  221 gaatcaaataagccttaatttaat 244  Q
    | |||||||||||| | |||||||    
T  14477896 ggatcaaataagccatcatttaat 14477919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 15071454 - 15071339
Alignment:
Q  120 tggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccat 219  Q
    ||||||||||||| |||||||||||||  |||||||||||||| || ||| |||||||| || ||||||||||||||||||||| |||||  || ||||     
T  15071454 tggatttatttggtaaacggaggaaaaagtgagggaccaaaacatacgttttattaattatgtgaccaaaatgaaaacttgaaattatttaggggaccaa 15071355  T
Q  220 tgaatcaaataagcct 235  Q
    || || ||||||||||    
T  15071354 tggattaaataagcct 15071339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 44278354 - 44278436
Alignment:
Q  121 ggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    |||| |||||||||||||||| ||||  ||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||    
T  44278354 ggatctatttggcaaacggagaaaaaaatgagggaccaaaacgtacgttttattaatcgtgggaccaaaatgaaaacttgaaa 44278436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 235 - 315
Target Start/End: Original strand, 5521975 - 5522055
Alignment:
Q  235 ttaatttaatgcacttatttgaagttttttaagtttttaagtatcaaataggtctttaaaaggttaacaaagacctatttg 315  Q
    |||||||||| |||||||||||||||||| |||||||||||| ||||||||||| |||||||| ||| || ||||||||||    
T  5521975 ttaatttaatacacttatttgaagtttttaaagtttttaagtttcaaataggtccttaaaagggtaataaggacctatttg 5522055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 25 - 203
Target Start/End: Complemental strand, 46467351 - 46467175
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctgg-a 123  Q
    ||||||||||||||||||||| ||||||| || || | |||| |||| |||| |||||||||||||||||||  ||  | ||||| ||||| |   || |    
T  46467351 caaacggtttaaattaaaaat-ttaataacatctacggtggatcacttttaatgttggtccaccatagacat--ttatggttaaacttaacagcgaggga 46467255  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    |||||||| |||||||||| ||| |||||||||| |||| |  ||| ||||| || ||||||||||||||||||||||||    
T  46467254 tttatttgacaaacggaggcaaacctgagggaccgaaacatgagttttattagttatgggaccaaaatgaaaacttgaaa 46467175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 112 - 203
Target Start/End: Original strand, 15234037 - 15234128
Alignment:
Q  112 taactgtctggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    |||| ||| ||||||||||||||||||||||||||| |||||||| ||||||    || ||||||||||||||||||||||||||| |||||    
T  15234037 taacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaa 15234128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 58 - 241
Target Start/End: Complemental strand, 23091525 - 23091342
Alignment:
Q  58 tatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtct--ggatttatttggcaaacggaggaaaatctgaggga 155  Q
    |||| ||||||||| |||| |||||||||||||||||||  ||  ||||||| ||||| | ||  ||||||||||||||||||||| ||||  |||| ||    
T  23091525 tatggtggaccacttttaaagttggtccaccatagacat--ttgagattaaacttaacagactagggatttatttggcaaacggagaaaaaagtgagtga 23091428  T
Q  156 ccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaatcaaataagccttaattt 241  Q
    |||||||||| ||| ||||||||||   |||||||||||||  ||||| || ||  || |||| |  |||||||||||||| ||||    
T  23091427 ccaaaacgtacgttttattaattgtaaaaccaaaatgaaaatgtgaaattagttaggggaccaatagatcaaataagcctttattt 23091342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 27 - 241
Target Start/End: Complemental strand, 41872780 - 41872567
Alignment:
Q  27 aacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggattt 126  Q
    ||||||||||||||||||  |||||||| | |||| || || | ||||||| ||||| ||||||||||||  |  || ||||| |||||      |||||    
T  41872780 aacggtttaaattaaaaaatttaataaggtctatggtgaactaatcttaagattggttcaccatagacatt-tgggggttaaacttaacaccaatgattt 41872682  T
Q  127 atttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaatca 226  Q
    ||||||||||||||||||||  |||| |||  ||||||| ||| ||||||||||  || ||||||||||| |||||| || |  ||| ||||||  ||||    
T  41872681 atttggcaaacggaggaaaaagtgagagacttaaacgtacgttttattaattgtatgatcaaaatgaaaagttgaaattaatcaagggaccattagatca 41872582  T
Q  227 aataagccttaattt 241  Q
    |||||||||| ||||    
T  41872581 aataagcctttattt 41872567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 25 - 235
Target Start/End: Original strand, 41873881 - 41874090
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtc-tgga 123  Q
    ||||||||| ||||| |||| |||||| |  | |||| ||||||||||||||||||||||||||||||||||  ||  | ||||| |||||   |  |||    
T  41873881 caaacggttaaaatttaaaaaattaatgaagtctatggtggaccactcttaaggttggtccaccatagacat--ttgtggttaaacttaacaaccaagga 41873978  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaa 223  Q
    ||||||||| ||||||||||||| || | || ||||||  ||  || |||||||| || |||||| ||||||| | |||| || |||||| |||| || |    
T  41873979 tttatttggtaaacggaggaaaagctaaagggccaaaagatactttttattaattatgagaccaagatgaaaaatggaaattaattgagggaccaatgga 41874078  T
Q  224 tcaaataagcct 235  Q
    || |||||||||    
T  41874079 tctaataagcct 41874090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 13147333 - 13147412
Alignment:
Q  32 tttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagtta 113  Q
    ||||||||||||  ||||||| ||| |||| ||||||||| ||||||||||||||||||||||||  || ||||||||||||    
T  13147333 tttaaattaaaataattaataggatctatggtggaccactattaaggttggtccaccatagacat--ttgggattaaagtta 13147412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 146
Target Start/End: Original strand, 44999372 - 44999492
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactg-tctgga 123  Q
    |||| ||||||| ||||||  ||||||||||| |||| || |||||||||| | ||||||||||||||||||  ||  | ||||||||||| | |  |||    
T  44999372 caaatggtttaagttaaaataattaataagatctatggtgaaccactcttacgattggtccaccatagacat--ttaaggttaaagttaacagctaggga 44999469  T
Q  124 tttatttggcaaacggaggaaaa 146  Q
    |||||||||||||| ||||||||    
T  44999470 tttatttggcaaacagaggaaaa 44999492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 48527740 - 48527669
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacat 96  Q
    ||||| |||||||||||||  ||| ||||||| |||| |||||||||||||| ||||||| |||||||||||    
T  48527740 caaacagtttaaattaaaataattgataagatctatggtggaccactcttaaagttggtcgaccatagacat 48527669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 122 - 228
Target Start/End: Complemental strand, 50442734 - 50442628
Alignment:
Q  122 gatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattg 221  Q
    |||||||||| ||||| ||||||||  ||||| | ||||| ||| ||| ||||||||||| ||||||||| ||||| | ||| ||||||||| || ||||    
T  50442734 gatttatttgacaaacagaggaaaaggtgaggaatcaaaatgtacgttttattaattgtgagaccaaaataaaaacataaaattatttgagggacaattg 50442635  T
Q  222 aatcaaa 228  Q
     ||||||    
T  50442634 gatcaaa 50442628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 34350286 - 34350241
Alignment:
Q  58 tatgatggaccactcttaaggttggtccaccatagacatcatttgg 103  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||    
T  34350286 tatggtggaccactcttaaggttgatccaccatagacatcatttgg 34350241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 123 - 196
Target Start/End: Original strand, 51042350 - 51042422
Alignment:
Q  123 atttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaa 196  Q
    ||||||||||||||||||| ||||   ||||||| |||||||  ||| ||||||||||||||||||||||||||    
T  51042350 atttatttggcaaacggagaaaaaaa-gagggactaaaacgtgagttttattaattgtgggaccaaaatgaaaa 51042422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 9226132 - 9226196
Alignment:
Q  32 tttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacat 96  Q
    ||||||||||||  ||||||| ||| |||| ||||||||| ||||||||| ||||||||||||||    
T  9226132 tttaaattaaaataattaataggatctatggtggaccacttttaaggttgatccaccatagacat 9226196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 12665996 - 12665944
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaag 77  Q
    ||||||||||||||||| || ||||||||||| |||| |||||||||||||||    
T  12665996 caaacggtttaaattaacaaaattaataagatctatggtggaccactcttaag 12665944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 10711989 - 10711926
Alignment:
Q  30 ggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccataga 93  Q
    ||||||||||||||| |||| ||  |||||||||||||||||||| ||||||||| | ||||||    
T  10711989 ggtttaaattaaaaaaattagtagaatttatgatggaccactctttaggttggtctatcataga 10711926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 10722291 - 10722354
Alignment:
Q  30 ggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccataga 93  Q
    ||||||||||||||| |||| ||  || ||||||||||||||||| ||||||||||| ||||||    
T  10722291 ggtttaaattaaaaaaattagtagaatctatgatggaccactctttaggttggtccatcataga 10722354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 15746692 - 15746747
Alignment:
Q  41 aaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacat 96  Q
    |||| ||||||| ||| |||| ||||||||||||||| ||||||||||||||||||    
T  15746692 aaaagattaataggatctatggtggaccactcttaagattggtccaccatagacat 15746747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 26802146 - 26802075
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacat 96  Q
    |||||||||||||||||||  ||||||| ||| |||  ||||| ||||||||||||||| |||| |||||||    
T  26802146 caaacggtttaaattaaaatgattaatatgatctatagtggacaactcttaaggttggttcaccttagacat 26802075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 52078054 - 52078125
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacat 96  Q
    ||||||||| |||||||||  ||||||| ||| |||| || | |||||||||||||||| ||||||||||||    
T  52078054 caaacggttaaaattaaaataattaataggatctatggtgtatcactcttaaggttggttcaccatagacat 52078125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 3617417 - 3617478
Alignment:
Q  35 aaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacat 96  Q
    |||||||||  ||||||| ||| |||  ||||||||||||||||||||| ||||||||||||    
T  3617417 aaattaaaataattaataggatctatagtggaccactcttaaggttggttcaccatagacat 3617478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 9485221 - 9485286
Alignment:
Q  32 tttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatc 97  Q
    ||||||||||||  ||||||| |||||||| |  ||||||||||| |||| |||||||||||||||    
T  9485221 tttaaattaaaataattaataggatttatggttaaccactcttaaagttgatccaccatagacatc 9485286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 14478472 - 14478401
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacat 96  Q
    |||||||||||||||| ||  ||||||| ||| |||| ||||||| | |||| || ||||||||||||||||    
T  14478472 caaacggtttaaattagaataattaataggatctatggtggaccatttttaaagtcggtccaccatagacat 14478401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 18821649 - 18821720
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacat 96  Q
    ||||||||| || || |||| ||||||| ||| | || | |||||||||||||||| |||||||||||||||    
T  18821649 caaacggttaaattttaaaaaattaataggatctttggtagaccactcttaaggttagtccaccatagacat 18821720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 196
Target Start/End: Complemental strand, 44276249 - 44276158
Alignment:
Q  105 ttaaagttaactgtctggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaa 196  Q
    ||||| ||||| ||| ||||||| ||| ||||| ||| ||||  ||| ||| ||||||||| ||| |||||||| || ||||||||||||||    
T  44276249 ttaaacttaacagtcaggatttaattgacaaacagagaaaaaagtgaaggatcaaaacgtacgttttattaattatgagaccaaaatgaaaa 44276158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 196
Target Start/End: Original strand, 48096963 - 48097111
Alignment:
Q  46 attaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctggatttatttggcaaacggaggaaa 145  Q
    ||||||| ||| |||| | ||||||||||||||||||||||||||| ||||  ||  | ||||| ||||| ||  ||||||||||| |  ||||||  ||    
T  48096963 attaataggatctatggtagaccactcttaaggttggtccaccatatacat--ttgaggttaaacttaacagtagggatttatttgaccgacggagacaa 48097060  T
Q  146 atctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaa 196  Q
    | || |||||| ||||| |  ||| ||||| || |||||||||||| ||||    
T  48097061 acctaagggactaaaacatgagttttattagttatgggaccaaaataaaaa 48097111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 51445796 - 51445725
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacat 96  Q
    |||||||||||||||| ||  ||||||| ||| |||| ||||||| | |||| |||| ||||||||||||||    
T  51445796 caaacggtttaaattagaataattaataggatctatggtggaccatttttaaagttgatccaccatagacat 51445725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 120 - 198
Target Start/End: Original strand, 30535673 - 30535751
Alignment:
Q  120 tggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaact 198  Q
    |||||||||||| |||||||||  | || ||||| || |||||||  ||| |||||||| ||| |||||||||||||||    
T  30535673 tggatttatttgacaaacggagttagatttgaggaactaaaacgttggttttattaattatggaaccaaaatgaaaact 30535751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 171 - 236
Target Start/End: Original strand, 33369250 - 33369315
Alignment:
Q  171 tattaattgtgggaccaaaatgaaaacttgaaaatatttgagga-accattgaatcaaataagcctt 236  Q
    |||||||| ||||||||||||||| |||||||| || || |||| ||||||| ||||||||||||||    
T  33369250 tattaattatgggaccaaaatgaatacttgaaattaatt-aggagaccattggatcaaataagcctt 33369315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 302
Target Start/End: Original strand, 52293858 - 52293927
Alignment:
Q  235 ttaatttaatgcacttatttgaagtttt--ttaagtttttaagtatcaaataggtctttaaaaggttaac 302  Q
    |||||||||| ||| |||||||||||||  |||||||||||| | ||||||||||| |||| ||| ||||    
T  52293858 ttaatttaatccacctatttgaagttttttttaagtttttaaatttcaaataggtccttaagagggtaac 52293927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 94; Significance: 1e-45; HSPs: 2)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 25 - 225
Target Start/End: Original strand, 43483 - 43684
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctgga 123  Q
    |||||||||||||||||||  ||||||| ||| |||| ||||||||||||||| |||||||||||||||||||| ||||  ||||| ||||| ||| |||    
T  43483 caaacggtttaaattaaaataattaataggatctatggtggaccactcttaagattggtccaccatagacatcacttggggttaaacttaaccgtcagga 43582  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaa 223  Q
     ||||||||||||||||||||||  ||||||||  |||| || ||| |||||||| |||||||||||| ||||||| ||| ||||||||| |||| ||||    
T  43583 cttatttggcaaacggaggaaaaagtgagggacttaaacatacgttttattaattatgggaccaaaataaaaacttaaaattatttgagggaccaatgaa 43682  T
Q  224 tc 225  Q
    ||    
T  43683 tc 43684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 42506 - 42443
Alignment:
Q  133 caaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaa 196  Q
    ||||||||| ||||||||| |||||||||||||  || |||||||||||| ||| |||| ||||    
T  42506 caaacggagaaaaatctgaaggaccaaaacgtactttttattaattgtggaaccgaaatcaaaa 42443  T

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Target: scaffold0034 (Bit Score: 70; Significance: 3e-31; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 25 - 235
Target Start/End: Original strand, 109656 - 109864
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctgga 123  Q
    |||| |||| ||||||| || ||||||||| | || ||||||| | | ||||||||||||||||||| ||||   ||| | ||||||||||  ||  |||    
T  109656 caaatggttaaaattaacaaaattaataaggtctacgatggactatttttaaggttggtccaccatatacat---ttgaagttaaagttaatagttggga 109752  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaa 223  Q
    || ||||||||||  ||| ||||  |||||||| |||| ||| ||| |||||||||| |||||||||||||||||||||| ||||| ||| |||||||||    
T  109753 ttcatttggcaaattgagaaaaaagtgagggactaaaatgtacgttttattaattgtaggaccaaaatgaaaacttgaaattatttaagggaccattgaa 109852  T
Q  224 tcaaataagcct 235  Q
    ||||||||||||    
T  109853 tcaaataagcct 109864  T

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Target: scaffold0034; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 25 - 234
Target Start/End: Complemental strand, 108720 - 108511
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctgga 123  Q
    |||| ||||||||||| ||  |||||||  || |||| ||||||||| ||||||||||||||||||| | || ||||||  ||||| |||||||   |||    
T  108720 caaaaggtttaaattataataattaatagcatctatggtggaccacttttaaggttggtccaccata-atattatttggggttaaacttaactgcaagga 108622  T
Q  124 tttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattgaa 223  Q
    ||||||||||||| |||||||||  ||||||| ||||||||| ||| |||||||| ||||| ||||||| ||| | |||| || ||  ||||||| ||||    
T  108621 tttatttggcaaatggaggaaaaaatgagggatcaaaacgtacgttttattaattatgggatcaaaatgtaaaatggaaattaattagggaaccaatgaa 108522  T
Q  224 tcaaataagcc 234  Q
    | |||||||||    
T  108521 ttaaataagcc 108511  T

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Target: scaffold0011 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 27 - 203
Target Start/End: Complemental strand, 127637 - 127462
Alignment:
Q  27 aacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtc-tggatt 125  Q
    |||||||||||||||||| ||||||| ||| |||| ||||||||||||||||||| | ||||||||||||  ||  | |||||||||||||||  |||||    
T  127637 aacggtttaaattaaaaacattaataggatctatggtggaccactcttaaggttgtttcaccatagacat--ttgaggttaaagttaactgtcagggatt 127540  T
Q  126 tatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaa 203  Q
    |||||| |  ||||||| |||  |||||||||||||| |  ||| ||||| || ||||||||||| ||||||||||||    
T  127539 tatttgaccgacggaggcaaacatgagggaccaaaacatgagttttattagttatgggaccaaaacgaaaacttgaaa 127462  T

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Target: scaffold1152 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 46 - 196
Target Start/End: Original strand, 2407 - 2556
Alignment:
Q  46 attaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctggatttatttggcaaacggaggaa 144  Q
    ||||||||| | || ||| ||||||| ||||||||||||||||||  |||| ||||||| ||||||||||| ||| | |||||||||| |||| ||||||    
T  2407 attaataaggtctacgatagaccacttttaaggttggtccaccatt-acat-atttggagttaaagttaacagtcggaatttatttggaaaacagaggaa 2504  T
Q  145 aatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaa 196  Q
    || || ||||||||||| |||  || ||||||||||||||||||||||||||    
T  2505 aaactaagggaccaaaaggtactttttattaattgtgggaccaaaatgaaaa 2556  T

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Target: scaffold0019 (Bit Score: 51; Significance: 6e-20; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 25 - 210
Target Start/End: Original strand, 63041 - 63225
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctgg- 122  Q
    ||||||||| ||||| |||| |||||| |  |||||| ||||||| ||||||| ||| |||| |||||||||   ||| | ||||| ||||| ||| ||     
T  63041 caaacggttaaaatttaaaaaattaatgaagtttatggtggaccattcttaagattgatccatcatagacat---ttgaagttaaacttaacagtcaggg 63137  T
Q  123 atttatttggcaaacggaggaaaatctgagggaccaaaacg-tatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttg 210  Q
    ||||||||||||||||||| ||||| |||||||| ||||||  || || |||||||||||||||||||||||||||  |||| ||||||    
T  63138 atttatttggcaaacggagaaaaatgtgagggactaaaacgccatctt-tattaattgtgggaccaaaatgaaaacacgaaattatttg 63225  T

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Target: scaffold0019; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 122 - 209
Target Start/End: Complemental strand, 61961 - 61874
Alignment:
Q  122 gatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatattt 209  Q
    ||||||||||||||||||| |||||  |||||||| ||||||    || |||||||| || ||||||||||||||| ||||| |||||    
T  61961 gatttatttggcaaacggaagaaaagatgagggactaaaacgccatttttattaattatgagaccaaaatgaaaacatgaaattattt 61874  T

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Target: scaffold0201 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 25 - 239
Target Start/End: Complemental strand, 21333 - 21120
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaact--gtctgg 122  Q
    ||||||||| ||||| |||| |||||| |  | |||| ||||||||||| ||||||||||||||||||||||  ||  | ||||| |||||   |  ||     
T  21333 caaacggttaaaatttaaaaaattaatgaagtctatggtggaccactctgaaggttggtccaccatagacat--ttgtggttaaacttaacaacgaatg- 21237  T
Q  123 atttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatatttgaggaaccattga 222  Q
    |||||||||||||||||||||||| || ||||| ||||| |||  || |||||||| |||||| |||||||||| |  ||| || ||||||  ||| ||     
T  21236 atttatttggcaaacggaggaaaaactaagggatcaaaaggtactttttattaattatgggactaaaatgaaaaatgaaaattaattgaggggccaatgg 21137  T
Q  223 atcaaataagccttaat 239  Q
    ||| |||||||||||||    
T  21136 atctaataagccttaat 21120  T

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Target: scaffold0078 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 121 - 209
Target Start/End: Complemental strand, 18923 - 18835
Alignment:
Q  121 ggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaattgtgggaccaaaatgaaaacttgaaaatattt 209  Q
    ||||||||||||||||||||| ||||  |||||||| ||||| || ||| |||||| | |||||||||||||||||||| ||| |||||    
T  18923 ggatttatttggcaaacggagtaaaaagtgagggactaaaacataagttttattaaatatgggaccaaaatgaaaacttaaaattattt 18835  T

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Target: scaffold0013 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 25 - 133
Target Start/End: Complemental strand, 32778 - 32670
Alignment:
Q  25 caaacggtttaaattaaaaatat--taataagatttatgatggaccactcttaaggttggtccaccatagacatcatttggattaaagttaactgtctgg 122  Q
    |||||||||||||||||||| |   ||||| ||| ||||||||||||||| |||||||||||||||||||||||  ||  | ||||||||||| ||  ||    
T  32778 caaacggtttaaattaaaaaaaaaataataggatctatgatggaccactcctaaggttggtccaccatagacat--ttaaggttaaagttaacagttagg 32681  T
Q  123 atttatttggc 133  Q
    |||||||||||    
T  32680 atttatttggc 32670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2071 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold2071
Description:

Target: scaffold2071; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 591 - 652
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtcca 86  Q
    ||||||||||||||||||||  |||||||| | |||| ||||||||||||||||||||||||    
T  591 caaacggtttaaattaaaaaatttaataaggtctatggtggaccactcttaaggttggtcca 652  T

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Target: scaffold0219 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 8101 - 8171
Alignment:
Q  25 caaacggtttaaattaaaaatattaataagatttatgatggaccactcttaaggttggtccaccatagacat 96  Q
    |||||||||||||||||||  |||||||  || ||||||||||| |||||||||||| ||||||||||||||    
T  8101 caaacggtttaaattaaaataattaatataatctatgatggacc-ctcttaaggttgatccaccatagacat 8171  T

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Target: scaffold1251 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold1251
Description:

Target: scaffold1251; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 78 - 218
Target Start/End: Original strand, 1048 - 1187
Alignment:
Q  78 gttggtccaccatagacatcatttggattaaagttaactgtc-tggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttatattaa 176  Q
    |||||||||||||||||||  || || |||||||||||   | || ||||||||| |  |||||||  ||| |||||||||||||| |  ||| |||||     
T  1048 gttggtccaccatagacat--ttggggttaaagttaacacccatgaatttatttgactgacggaggtgaatttgagggaccaaaacatgagttttattac 1145  T
Q  177 ttgtgggaccaaaatgaaaacttgaaaatatttgaggaacca 218  Q
    || ||||||||||||||||||| |||| ||||||||| ||||    
T  1146 ttatgggaccaaaatgaaaactggaaattatttgagggacca 1187  T

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Target: scaffold0001 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 235 - 295
Target Start/End: Complemental strand, 197139 - 197079
Alignment:
Q  235 ttaatttaatgcacttatttgaagttttttaagtttttaagtatcaaataggtctttaaaa 295  Q
    |||||||||||||| || |||||||||||||||||||||| | | |||  |||||||||||    
T  197139 ttaatttaatgcacatagttgaagttttttaagtttttaaattttaaactggtctttaaaa 197079  T

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Target: scaffold0472 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 105 - 147
Target Start/End: Original strand, 734 - 776
Alignment:
Q  105 ttaaagttaactgtctggatttatttggcaaacggaggaaaat 147  Q
    ||||||||||| ||| |||||||| ||||||||||||||||||    
T  734 ttaaagttaacagtcaggatttatatggcaaacggaggaaaat 776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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