View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7390_low_6 (Length: 281)
Name: NF7390_low_6
Description: NF7390
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7390_low_6 |
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Alignment Details
Target: chr8 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 271
Target Start/End: Original strand, 12136920 - 12137190
Alignment:
| Q |
1 |
tgtccatgtctctctagaggtaacctttttgattgcatattattctgttgtgctttttaaacgataagcgactaagcgttgtagtatttaatttctagca |
100 |
Q |
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| T |
12136920 |
tgtccatgtctctctagaggtaacctttttgattgcatattattctgttgtgctttttaaacgataagcgactaagcgttgtagtatttaatttctagca |
12137019 |
T |
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| Q |
101 |
gaatttctttttaacacttaatagcagtttttgtttggggaaaaccaattgttattgttatttatatatttaattatgacatttgatttcctggactatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12137020 |
gaatttctttttaacacttaatagcagtttttgtttggggaaaaccaattgttattgttatttatatatttaattatgacatttgatttcctggactatt |
12137119 |
T |
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| Q |
201 |
tccttcttcattattgttgactgttttcttttagtcaaggataagaatcttaggtgaaatcatggtgatgt |
271 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12137120 |
tcctccttcattattgttgactgttttcttttagtcaaggataagaatcttaggtgaaatcatggtgatgt |
12137190 |
T |
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