View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7391_high_2 (Length: 290)
Name: NF7391_high_2
Description: NF7391
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7391_high_2 |
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Alignment Details
Target: chr5 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 10271392 - 10271101
Alignment:
| Q |
1 |
aaaaatattttaagcgactttgatctccataatgcttgtgattgctcatatttctttgtttggggtcatcttcatttgtttttcaaatcacatgtttatg |
100 |
Q |
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| T |
10271392 |
aaaaatattttaagcgactttgatctccataatgcttgtgattgcccatatttctttgtttggggtcatcttcatttgtttttcaaatcacatgtttatg |
10271293 |
T |
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| Q |
101 |
gcaattgatatttctgttgttaaacaaattgatccaaaactttcaaagctttcatctta------------tgcataactttgaccatatttgagtaaca |
188 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |
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| T |
10271292 |
gcaattgatatttctgttgttaaacaaattgatccaaaactttcaaagctttcatcttatattctttctcgtgcataactttgaccatatttgaataaca |
10271193 |
T |
|
| Q |
189 |
gacactcaccaaactatcattagtttatttacaaaacaaaaggggtgtaaccttggataacggatgattacatttacactatgtttgatgtc |
280 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
10271192 |
gacactcaccaaactatcattagtttatttacaaaacaaaaggggtgtaaccttggataacggatgattacatttacactatgttttatgtc |
10271101 |
T |
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