View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7392_high_8 (Length: 271)

Name: NF7392_high_8
Description: NF7392
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7392_high_8
NF7392_high_8
[»] chr4 (51 HSPs)
chr4 (91-255)||(25493834-25493999)
chr4 (96-255)||(38840336-38840491)
chr4 (110-247)||(37209910-37210045)
chr4 (102-255)||(54982675-54982823)
chr4 (100-255)||(2492861-2493009)
chr4 (102-255)||(50720919-50721065)
chr4 (102-219)||(45635409-45635521)
chr4 (102-235)||(9089558-9089683)
chr4 (110-255)||(34031923-34032058)
chr4 (180-255)||(53393438-53393513)
chr4 (178-255)||(46195856-46195933)
chr4 (180-255)||(24074058-24074133)
chr4 (102-236)||(49263016-49263137)
chr4 (104-167)||(668030-668094)
chr4 (180-255)||(19443470-19443545)
chr4 (92-167)||(38044925-38045000)
chr4 (180-255)||(49299764-49299839)
chr4 (102-167)||(25490482-25490548)
chr4 (103-219)||(33889622-33889729)
chr4 (180-255)||(45666417-45666491)
chr4 (102-152)||(6949111-6949161)
chr4 (102-148)||(24074134-24074180)
chr4 (102-167)||(24538307-24538373)
chr4 (110-255)||(47944380-47944516)
chr4 (105-164)||(21956484-21956544)
chr4 (180-247)||(1821500-1821567)
chr4 (178-229)||(53370322-53370373)
chr4 (102-167)||(45666319-45666385)
chr4 (102-167)||(46195766-46195832)
chr4 (102-174)||(2684696-2684768)
chr4 (178-240)||(38044828-38044896)
chr4 (104-219)||(41502560-41502685)
chr4 (180-228)||(6949223-6949271)
chr4 (102-166)||(38045432-38045496)
chr4 (178-229)||(24538230-24538281)
chr4 (102-168)||(28130510-28130577)
chr4 (110-229)||(30913560-30913686)
chr4 (178-229)||(37371330-37371381)
chr4 (184-229)||(30912714-30912759)
chr4 (104-167)||(1821591-1821655)
chr4 (102-168)||(23529534-23529602)
chr4 (116-152)||(42219056-42219092)
chr4 (187-229)||(8077931-8077973)
chr4 (102-148)||(33808893-33808939)
chr4 (102-147)||(20782488-20782533)
chr4 (102-131)||(21342249-21342278)
chr4 (102-166)||(38434239-38434304)
chr4 (102-135)||(46016623-46016656)
chr4 (102-135)||(46250061-46250094)
chr4 (178-219)||(55343851-55343892)
chr4 (102-141)||(46196823-46196863)
[»] chr7 (40 HSPs)
chr7 (103-255)||(16196804-16196948)
chr7 (102-247)||(35793040-35793179)
chr7 (105-255)||(4567337-4567477)
chr7 (102-236)||(10534952-10535077)
chr7 (96-255)||(37124186-37124338)
chr7 (106-246)||(3835577-3835729)
chr7 (102-232)||(8614777-8614898)
chr7 (184-255)||(39617612-39617683)
chr7 (102-229)||(4962880-4963005)
chr7 (178-236)||(12394237-12394295)
chr7 (102-164)||(14735061-14735122)
chr7 (102-229)||(25290638-25290763)
chr7 (102-166)||(2273516-2273581)
chr7 (102-163)||(2798623-2798685)
chr7 (91-141)||(10026246-10026296)
chr7 (102-211)||(28226566-28226667)
chr7 (179-248)||(27723403-27723471)
chr7 (180-228)||(14771361-14771409)
chr7 (180-228)||(15221813-15221861)
chr7 (102-161)||(15643353-15643413)
chr7 (102-164)||(1752593-1752656)
chr7 (178-228)||(15643447-15643497)
chr7 (115-167)||(4678434-4678487)
chr7 (104-167)||(39427421-39427486)
chr7 (102-161)||(43368803-43368863)
chr7 (103-211)||(36412806-36412903)
chr7 (102-167)||(39617562-39617624)
chr7 (178-229)||(46671961-46672012)
chr7 (102-166)||(27723308-27723373)
chr7 (102-167)||(37072387-37072452)
chr7 (102-166)||(39430605-39430670)
chr7 (102-147)||(44550049-44550094)
chr7 (180-219)||(2271863-2271902)
chr7 (105-163)||(24394232-24394291)
chr7 (102-167)||(7809198-7809264)
chr7 (119-164)||(27229629-27229675)
chr7 (178-228)||(39430528-39430577)
chr7 (102-166)||(39599693-39599759)
chr7 (178-219)||(24394160-24394201)
chr7 (178-211)||(43368891-43368924)
[»] chr2 (49 HSPs)
chr2 (102-255)||(45273338-45273485)
chr2 (102-255)||(21252600-21252745)
chr2 (102-256)||(38589222-38589371)
chr2 (91-255)||(29408692-29408872)
chr2 (102-229)||(44898130-44898252)
chr2 (104-228)||(41541066-41541187)
chr2 (102-226)||(4316717-4316848)
chr2 (102-164)||(20171446-20171509)
chr2 (96-167)||(158095-158167)
chr2 (180-255)||(150180-150254)
chr2 (184-239)||(11073871-11073926)
chr2 (178-229)||(25965803-25965854)
chr2 (178-228)||(158018-158068)
chr2 (102-152)||(33659577-33659627)
chr2 (102-167)||(33659722-33659788)
chr2 (107-167)||(7486320-7486381)
chr2 (102-166)||(36244041-36244106)
chr2 (102-176)||(150274-150347)
chr2 (102-225)||(15507470-15507589)
chr2 (178-225)||(27746580-27746627)
chr2 (178-229)||(34424702-34424753)
chr2 (106-167)||(1770183-1770245)
chr2 (115-161)||(2218236-2218282)
chr2 (102-167)||(11083922-11083988)
chr2 (102-152)||(32113374-32113424)
chr2 (187-229)||(42872211-42872253)
chr2 (178-255)||(1397565-1397642)
chr2 (184-244)||(3309795-3309854)
chr2 (180-232)||(16806500-16806552)
chr2 (180-232)||(16845781-16845833)
chr2 (178-229)||(4959308-4959359)
chr2 (178-228)||(12411763-12411813)
chr2 (178-228)||(12423823-12423873)
chr2 (116-167)||(20891309-20891359)
chr2 (102-147)||(37360356-37360401)
chr2 (102-147)||(37814535-37814580)
chr2 (102-165)||(3309844-3309907)
chr2 (188-220)||(7486252-7486284)
chr2 (180-219)||(11084013-11084052)
chr2 (105-148)||(29882190-29882233)
chr2 (102-152)||(4700981-4701031)
chr2 (102-148)||(13140913-13140958)
chr2 (114-152)||(31193808-31193846)
chr2 (178-212)||(42756903-42756937)
chr2 (107-163)||(7412018-7412075)
chr2 (103-148)||(27746488-27746533)
chr2 (102-147)||(42756810-42756855)
chr2 (189-229)||(33659802-33659842)
chr2 (110-165)||(34424782-34424838)
[»] chr1 (32 HSPs)
chr1 (102-255)||(36319891-36320038)
chr1 (102-255)||(13254683-13254828)
chr1 (102-219)||(2655732-2655844)
chr1 (104-248)||(6295678-6295814)
chr1 (104-230)||(52414961-52415079)
chr1 (102-234)||(39386714-39386836)
chr1 (102-228)||(1674714-1674838)
chr1 (102-167)||(10101674-10101739)
chr1 (104-167)||(40519202-40519266)
chr1 (108-219)||(32769020-32769124)
chr1 (104-219)||(4671439-4671546)
chr1 (104-167)||(30280058-30280122)
chr1 (178-229)||(788209-788260)
chr1 (102-167)||(788288-788354)
chr1 (104-161)||(23699437-23699495)
chr1 (180-229)||(4396005-4396054)
chr1 (112-164)||(52281747-52281800)
chr1 (117-211)||(39157128-39157224)
chr1 (178-229)||(23699352-23699403)
chr1 (103-168)||(3901042-3901107)
chr1 (102-148)||(10430545-10430591)
chr1 (102-152)||(11238264-11238314)
chr1 (102-163)||(23913283-23913344)
chr1 (102-148)||(43021152-43021198)
chr1 (103-168)||(50488763-50488828)
chr1 (178-219)||(19269823-19269864)
chr1 (102-228)||(31623050-31623180)
chr1 (183-228)||(23697658-23697704)
chr1 (192-229)||(1394791-1394828)
chr1 (102-147)||(21967181-21967226)
chr1 (184-229)||(37710411-37710456)
chr1 (113-176)||(1454314-1454377)
[»] chr6 (19 HSPs)
chr6 (102-255)||(25056510-25056666)
chr6 (102-245)||(8049199-8049334)
chr6 (96-229)||(23410497-23410621)
chr6 (102-229)||(7972584-7972702)
chr6 (184-255)||(9353188-9353259)
chr6 (102-229)||(4665898-4666023)
chr6 (102-167)||(6111127-6111193)
chr6 (102-255)||(14093688-14093856)
chr6 (178-229)||(8460946-8460997)
chr6 (178-229)||(21527250-21527301)
chr6 (102-148)||(4122801-4122847)
chr6 (179-229)||(9095694-9095744)
chr6 (102-148)||(9353140-9353186)
chr6 (102-167)||(34889081-34889147)
chr6 (104-167)||(26252595-26252659)
chr6 (102-176)||(9095765-9095839)
chr6 (102-152)||(2437855-2437905)
chr6 (178-228)||(4184768-4184818)
chr6 (180-229)||(6111051-6111100)
[»] chr5 (36 HSPs)
chr5 (102-255)||(17201246-17201403)
chr5 (105-255)||(1583481-1583622)
chr5 (102-255)||(8544659-8544799)
chr5 (102-218)||(19924907-19925013)
chr5 (108-218)||(19922163-19922263)
chr5 (124-255)||(42674002-42674126)
chr5 (102-229)||(16365751-16365871)
chr5 (102-218)||(19931856-19931962)
chr5 (180-247)||(17202321-17202388)
chr5 (115-255)||(32474209-32474361)
chr5 (180-255)||(18413290-18413365)
chr5 (102-229)||(39614852-39614976)
chr5 (102-167)||(17202829-17202895)
chr5 (122-255)||(6428276-6428400)
chr5 (102-255)||(36437270-36437410)
chr5 (178-248)||(11992120-11992190)
chr5 (108-229)||(32717928-32718043)
chr5 (102-164)||(17591666-17591728)
chr5 (102-255)||(12436660-12436800)
chr5 (102-167)||(14654947-14655013)
chr5 (102-200)||(1590169-1590265)
chr5 (104-152)||(11825450-11825498)
chr5 (104-167)||(20201658-20201722)
chr5 (178-229)||(20201749-20201800)
chr5 (102-164)||(36246289-36246352)
chr5 (104-230)||(43346621-43346737)
chr5 (104-176)||(249535-249607)
chr5 (113-152)||(14967142-14967181)
chr5 (105-148)||(36194043-36194086)
chr5 (102-176)||(11992208-11992285)
chr5 (178-218)||(19133422-19133462)
chr5 (108-176)||(39585751-39585818)
chr5 (108-162)||(39584848-39584903)
chr5 (178-220)||(14655040-14655082)
chr5 (115-164)||(39940312-39940362)
chr5 (180-230)||(249469-249516)
[»] chr3 (51 HSPs)
chr3 (102-255)||(45646618-45646766)
chr3 (102-255)||(37030895-37031034)
chr3 (102-240)||(5493571-5493704)
chr3 (102-255)||(2093794-2093948)
chr3 (117-229)||(3751492-3751603)
chr3 (102-229)||(9588763-9588905)
chr3 (180-247)||(2599148-2599215)
chr3 (109-247)||(20841344-20841472)
chr3 (102-240)||(34668700-34668830)
chr3 (181-255)||(45759847-45759921)
chr3 (102-166)||(633286-633351)
chr3 (91-248)||(16237513-16237666)
chr3 (104-167)||(21934484-21934548)
chr3 (113-229)||(15638435-15638543)
chr3 (102-228)||(23772188-23772312)
chr3 (180-244)||(42735542-42735606)
chr3 (102-165)||(45759956-45760020)
chr3 (102-229)||(375764-375885)
chr3 (178-229)||(7259636-7259687)
chr3 (102-176)||(19578350-19578425)
chr3 (102-176)||(45667474-45667548)
chr3 (102-175)||(25342372-25342445)
chr3 (178-228)||(25841858-25841908)
chr3 (102-167)||(25841935-25842001)
chr3 (102-152)||(27264131-27264181)
chr3 (102-147)||(20141032-20141077)
chr3 (104-219)||(44940825-44940932)
chr3 (102-228)||(23720347-23720469)
chr3 (102-228)||(23738803-23738925)
chr3 (178-228)||(296544-296594)
chr3 (179-229)||(6512510-6512560)
chr3 (102-152)||(7259722-7259772)
chr3 (102-152)||(19234008-19234058)
chr3 (102-148)||(29556523-29556569)
chr3 (180-230)||(38751036-38751086)
chr3 (102-147)||(1272444-1272489)
chr3 (181-229)||(6472678-6472726)
chr3 (102-228)||(23701892-23702013)
chr3 (103-166)||(54675184-54675247)
chr3 (102-167)||(296452-296519)
chr3 (102-137)||(10614618-10614653)
chr3 (182-225)||(12568520-12568563)
chr3 (182-225)||(13544984-13545027)
chr3 (117-148)||(15772305-15772336)
chr3 (103-165)||(19187668-19187731)
chr3 (178-229)||(21959653-21959704)
chr3 (110-176)||(27817442-27817508)
chr3 (114-152)||(25485838-25485876)
chr3 (102-147)||(23272072-23272117)
chr3 (178-211)||(54675151-54675184)
chr3 (104-152)||(38751103-38751151)
[»] chr8 (41 HSPs)
chr8 (91-255)||(16393713-16393870)
chr8 (102-244)||(39628213-39628354)
chr8 (102-244)||(39637763-39637904)
chr8 (102-247)||(32233648-32233786)
chr8 (102-248)||(25496669-25496808)
chr8 (102-248)||(25400490-25400628)
chr8 (102-248)||(34146203-34146364)
chr8 (180-255)||(38457388-38457463)
chr8 (188-255)||(7695190-7695257)
chr8 (102-218)||(27231793-27231905)
chr8 (102-248)||(1256653-1256793)
chr8 (103-230)||(29315815-29315934)
chr8 (110-167)||(38457299-38457357)
chr8 (102-167)||(45083025-45083091)
chr8 (102-174)||(7695286-7695359)
chr8 (102-228)||(11087147-11087270)
chr8 (179-255)||(30887777-30887853)
chr8 (102-176)||(16599368-16599442)
chr8 (102-167)||(14896649-14896715)
chr8 (102-246)||(38401586-38401720)
chr8 (180-229)||(1358838-1358887)
chr8 (102-161)||(5870775-5870835)
chr8 (110-229)||(34038919-34039030)
chr8 (102-167)||(1530593-1530659)
chr8 (178-228)||(3443651-3443701)
chr8 (103-152)||(3741656-3741705)
chr8 (178-230)||(3741745-3741797)
chr8 (102-144)||(30887888-30887930)
chr8 (180-229)||(4418835-4418884)
chr8 (103-167)||(36682579-36682643)
chr8 (108-167)||(3443728-3443788)
chr8 (102-165)||(9455254-9455318)
chr8 (103-166)||(40557232-40557295)
chr8 (102-176)||(7578198-7578272)
chr8 (178-229)||(16599287-16599338)
chr8 (103-211)||(41411430-41411527)
chr8 (102-137)||(44666214-44666249)
chr8 (110-167)||(2742936-2742994)
chr8 (102-167)||(4418590-4418655)
chr8 (180-220)||(11384711-11384751)
chr8 (116-152)||(34870576-34870612)
[»] scaffold0005 (2 HSPs)
scaffold0005 (102-255)||(256764-256907)
scaffold0005 (178-219)||(272310-272351)
[»] scaffold1130 (1 HSPs)
scaffold1130 (102-228)||(405-519)
[»] scaffold0006 (1 HSPs)
scaffold0006 (102-228)||(46530-46644)
[»] scaffold1801 (1 HSPs)
scaffold1801 (124-242)||(1236-1346)
[»] scaffold1327 (1 HSPs)
scaffold1327 (102-173)||(891-963)
[»] scaffold0118 (3 HSPs)
scaffold0118 (116-167)||(14952-15004)
scaffold0118 (180-229)||(15182-15231)
scaffold0118 (105-137)||(15277-15309)
[»] scaffold0188 (2 HSPs)
scaffold0188 (184-228)||(6361-6405)
scaffold0188 (102-161)||(6399-6459)


Alignment Details
Target: chr4 (Bit Score: 134; Significance: 8e-70; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 91 - 255
Target Start/End: Original strand, 25493834 - 25493999
Alignment:
Q  91 tacgatttgaaaattactcttatctttttcaataaaactaattaatgttatctatttggaaa-ctaaagtttgtttttatttaaacagtaaaacaaagtt 189  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||    
T  25493834 tacgatttgacaattactcttatctttttcaataaaactaattaatgttatctatttggaaaactaaagtttgtttttatttaaagaataaaacaaagtt 25493933  T
Q  190 tgtttcttgttatcttcaaatttaaacaaaactttgttacaaacaatggttccaagaagggttaaa 255  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  25493934 tgtttcttggtatcttcaaatttaaacaaaattttgttacaaacaatggttccaagaagagttaaa 25493999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 96 - 255
Target Start/End: Complemental strand, 38840491 - 38840336
Alignment:
Q  96 tttgaaaattactcttatctttttcaataaaactaattaatgttatctatttggaaa-ctaaagtttgttt-ttatttaaacagtaaaacaaagtttgtt 193  Q
    ||||| ||||||| |||||||||| | ||||||||||||||| |||||||||| ||| ||||||||||||| ||||||      ||||||||||||||||    
T  38840491 tttgacaattacttttatcttttttagtaaaactaattaatgctatctatttgaaaaactaaagtttgtttgttattt------taaaacaaagtttgtt 38840398  T
Q  194 tcttgttatcttcaaatttaaacaaaactttgttacaaacaatggttccaagaagggttaaa 255  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||| ||||||| ||||||    
T  38840397 tcttgttatcttcaaatttaaacaaaattttgttccaaacaatggtttcaagaagagttaaa 38840336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 110 - 247
Target Start/End: Complemental strand, 37210045 - 37209910
Alignment:
Q  110 ttatctttttcaataaaactaattaatgttatctatttggaaa-ctaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgttatcttcaa 208  Q
    ||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||| |||      |||||||||||||||||||||||||||||||    
T  37210045 ttatctttttcaataaaactaatcaatgctatctatttggaaaactaaagtttgtttttttttttt---taaaacaaagtttgtttcttgttatcttcaa 37209949  T
Q  209 atttaaacaaaactttgttacaaacaatggttccaagaa 247  Q
    |||||||||||| ||  |||||||||||| |||||||||    
T  37209948 atttaaacaaaatttaattacaaacaatgattccaagaa 37209910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 102 - 255
Target Start/End: Complemental strand, 54982823 - 54982675
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaa-ctaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtt 200  Q
    ||||||| ||||| |||||||||||||||| ||||| |||||||||||||| |||||||||| |||| |||      | |||||||||||||||||||||    
T  54982823 aattacttttatccttttcaataaaactaactaatgctatctatttggaaaactaaagtttggttttcttt------ttaaacaaagtttgtttcttgtt 54982730  T
Q  201 atcttcaaatttaaacaaaactttgttacaaacaatggttccaagaagggttaaa 255  Q
    ||||||||||||| |||||| |||| |||||||||||||| ||||||| ||||||    
T  54982729 atcttcaaatttatacaaaattttgctacaaacaatggtttcaagaagagttaaa 54982675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 100 - 255
Target Start/End: Original strand, 2492861 - 2493009
Alignment:
Q  100 aaaattactcttatctttttcaataaaactaattaatgttatctatttggaaa-ctaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttg 198  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||| ||| ||||||||| |||||  |||||      |||||| ||||||| |||    
T  2492861 aaaattactcttatcttttttaataaaactaattaatgctatctatttgaaaaactaaagtttattttt--ttaaa------aacaaaatttgttttttg 2492952  T
Q  199 ttatcttcaaatttaaacaaaactttgttacaaacaatggttccaagaagggttaaa 255  Q
    |||||||||||||||||||||| |||||||||||||||||||  |||||| ||||||    
T  2492953 ttatcttcaaatttaaacaaaattttgttacaaacaatggttataagaagagttaaa 2493009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 102 - 255
Target Start/End: Original strand, 50720919 - 50721065
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaa-ctaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtt 200  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| ||| | ||||||||||| | |||||||        |||||||||||||| ||    
T  50720919 aattactcttatctttttcaataaaactaattaatgctatctatttgaaaaacaaaagtttgtttatttttaaac--------aaagtttgtttcttatt 50721010  T
Q  201 atcttcaaatttaaacaaaactttgttacaaacaatggttccaagaagggttaaa 255  Q
    |||||||||||||||||||||||| |||||||  |||||| ||||||| ||||||    
T  50721011 atcttcaaatttaaacaaaactttattacaaatcatggttgcaagaagagttaaa 50721065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 45635521 - 45635409
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtt 200  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||| | ||| |||      ||||||||| |||||||||||||    
T  45635521 aattactcttatatttttcaataaaactaattaatgttatatatttggaaaactaaagtttttattttttt------taaaacaaaatttgtttcttgtt 45635428  T
Q  201 atcttcaaatttaaacaaa 219  Q
    |||||||||||||||||||    
T  45635427 atcttcaaatttaaacaaa 45635409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 102 - 235
Target Start/End: Complemental strand, 9089683 - 9089558
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaact-aaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtt 200  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| ||| | |||| || ||||| ||         |||||| || |||||||||||    
T  9089683 aattactcttatctttttcaataaaactaattaatgctatctatttgaaaaattaaagcttttttttttt---------aaacaatgtatgtttcttgtt 9089593  T
Q  201 atcttcaaatttaaacaaaactttgttacaaacaa 235  Q
    |||||||||||||||||||||||||||||||||||    
T  9089592 atcttcaaatttaaacaaaactttgttacaaacaa 9089558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 255
Target Start/End: Complemental strand, 34032058 - 34031923
Alignment:
Q  110 ttatctttttcaataaaactaattaatgttatctatttggaaa-ctaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgttatcttcaa 208  Q
    ||||||||||||||||||||||||||| |||||||||| |||| ||||||||| ||||||    ||||       ||||||||||||||||||| || ||    
T  34032058 ttatctttttcaataaaactaattaatattatctatttagaaaactaaagttttttttta----aaca-------aaagtttgtttcttgttatttttaa 34031970  T
Q  209 atttaaacaaaactttgttacaaacaatggttccaagaagggttaaa 255  Q
    |||||||||||| ||| || |||| ||||||||||||||| ||||||    
T  34031969 atttaaacaaaattttcttccaaaaaatggttccaagaagagttaaa 34031923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 180 - 255
Target Start/End: Original strand, 53393438 - 53393513
Alignment:
Q  180 aaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttacaaacaatggttccaagaagggttaaa 255  Q
    ||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||| |||||| ||||||    
T  53393438 aaacaaagtttgtttctagttatctttaaatttaaacaaaattttgttacaaacaatggttctaagaagagttaaa 53393513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 178 - 255
Target Start/End: Original strand, 46195856 - 46195933
Alignment:
Q  178 taaaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttacaaacaatggttccaagaagggttaaa 255  Q
    |||||| || ||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||| ||||||    
T  46195856 taaaaccaattttgtttcttgttatcttcaaatttaaacaaaattttgttccaaacaatggtttcaagaagagttaaa 46195933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 180 - 255
Target Start/End: Complemental strand, 24074133 - 24074058
Alignment:
Q  180 aaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttacaaacaatggttccaagaagggttaaa 255  Q
    ||||| ||||||||| |||| |||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||    
T  24074133 aaacacagtttgttttttgtcatcttcaaatttaaacaaaattttgttacaaacaatggtttcaagaagagttaaa 24074058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 236
Target Start/End: Original strand, 49263016 - 49263137
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaactaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtta 201  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||   |||||||||||            ||||  ||| |||||||||||| |    
T  49263016 aattactcttatctttttcaataaaactaattaatgatatctatttggaa--caaagtttgttt-----------ctaaagaaaactttgtttcttgtca 49263102  T
Q  202 tcttcaaatttaaacaaaactttgttacaaacaat 236  Q
    ||||||||||||||||||| ||||||| |||||||    
T  49263103 tcttcaaatttaaacaaaattttgttataaacaat 49263137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 104 - 167
Target Start/End: Complemental strand, 668094 - 668030
Alignment:
Q  104 ttactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgttttt 167  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  668094 ttactcttatctttttaaataaaactaattaatgttatatatttggaaaactaaagtttgttttt 668030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 180 - 255
Target Start/End: Complemental strand, 19443545 - 19443470
Alignment:
Q  180 aaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttacaaacaatggttccaagaagggttaaa 255  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||| || ||||||| |||| ||||||| ||||||    
T  19443545 aaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttattccaaacaaaggtttcaagaagagttaaa 19443470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 38045000 - 38044925
Alignment:
Q  92 acgatttgaaaattactcttatctttttcaataaaactaattaatgttatctatttggaaactaaagtttgttttt 167  Q
    ||||||||  |||| ||||||| ||||||||||||| |||||||| |||||||||||||||||||||||| |||||    
T  38045000 acgatttgtcaatttctcttatatttttcaataaaattaattaatattatctatttggaaactaaagttttttttt 38044925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 180 - 255
Target Start/End: Complemental strand, 49299839 - 49299764
Alignment:
Q  180 aaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttacaaacaatggttccaagaagggttaaa 255  Q
    ||||||| ||||||||||||||| |||||||||||| |||| |||||| ||||||||| |||||||||| ||||||    
T  49299839 aaacaaaatttgtttcttgttattttcaaatttaaagaaaattttgttccaaacaatgattccaagaagagttaaa 49299764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 102 - 167
Target Start/End: Original strand, 25490482 - 25490548
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgttttt 167  Q
    ||||||||||||| |||||||||||| ||||||||||||| ||||||| ||||||||||||||||||    
T  25490482 aattactcttatcattttcaataaaaataattaatgttatatatttggaaaactaaagtttgttttt 25490548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 103 - 219
Target Start/End: Original strand, 33889622 - 33889729
Alignment:
Q  103 attactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtta 201  Q
    ||||||||||||||||| ||||||||||||||||| ||| ||||||| |||||||| ||| ||||||          |||||||| ||||||||||||||    
T  33889622 attactcttatcttttttaataaaactaattaatgctatatatttggaaaactaaaattttttttta----------aaaacaaaatttgtttcttgtta 33889711  T
Q  202 tcttcaaatttaaacaaa 219  Q
    |||||| |||||||||||    
T  33889712 tcttcagatttaaacaaa 33889729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 255
Target Start/End: Original strand, 45666417 - 45666491
Alignment:
Q  180 aaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttacaaacaatggttccaagaagggttaaa 255  Q
    ||||||||||||||||||||||| || |||||||||||||| ||||||  |||| |||||||||||||| ||||||    
T  45666417 aaacaaagtttgtttcttgttattttgaaatttaaacaaaattttgttctaaac-atggttccaagaagagttaaa 45666491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 152
Target Start/End: Original strand, 6949111 - 6949161
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaa 152  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  6949111 aattactcttatctttttcaataaaactaattaatgctatctatatggaaa 6949161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 24074180 - 24074134
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttg 148  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||    
T  24074180 aattactcttaactttttcaataaaactaattaatgttatctatttg 24074134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 167
Target Start/End: Complemental strand, 24538373 - 24538307
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgttttt 167  Q
    ||||| |||||| |||||||||||||||||||| |||||| ||||||| ||||||||||||||||||    
T  24538373 aattattcttatatttttcaataaaactaattagtgttatatatttggaaaactaaagtttgttttt 24538307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 255
Target Start/End: Complemental strand, 47944516 - 47944380
Alignment:
Q  110 ttatctttttcaataaaactaattaatgttatctattt-ggaaactaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgttatcttcaa 208  Q
    |||||||||||||||||||| ||||||| ||||||||| | ||| ||||||||||||||          ||||||||| ||||| |||| ||||| | ||    
T  47944516 ttatctttttcaataaaacttattaatgctatctatttagaaaattaaagtttgttttt---------ttaaaacaaaatttgtgtctttttatc-taaa 47944427  T
Q  209 atttaaacaaaactttgttacaaacaatggttccaagaagggttaaa 255  Q
    |||||||||||| |||||| ||||||||||||  |||||| ||||||    
T  47944426 atttaaacaaaattttgttccaaacaatggttttaagaagagttaaa 47944380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 105 - 164
Target Start/End: Complemental strand, 21956544 - 21956484
Alignment:
Q  105 tactcttatctttttcaataaaactaattaatgttatctatttg-gaaactaaagtttgtt 164  Q
    |||||||||||||||||||||||||||||||| ||| |||||||  |||||||||||||||    
T  21956544 tactcttatctttttcaataaaactaattaatattacctatttgaaaaactaaagtttgtt 21956484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 247
Target Start/End: Complemental strand, 1821567 - 1821500
Alignment:
Q  180 aaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttacaaacaatggttccaagaa 247  Q
    ||||||| ||||||| ||||||||||||||||||||||||| |||||| ||| ||||| || ||||||    
T  1821567 aaacaaaatttgtttattgttatcttcaaatttaaacaaaattttgttccaatcaatgatttcaagaa 1821500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 229
Target Start/End: Complemental strand, 53370373 - 53370322
Alignment:
Q  178 taaaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttac 229  Q
    |||||||||||||||||||| ||||||| |||||||||||||| ||||||||    
T  53370373 taaaacaaagtttgtttcttattatcttaaaatttaaacaaaagtttgttac 53370322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 167
Target Start/End: Original strand, 45666319 - 45666385
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgttttt 167  Q
    ||||||| |||||||||||||||||||| ||||||  ||||||||||| ||| ||||||||||||||    
T  45666319 aattacttttatctttttcaataaaacttattaataatatctatttggaaaattaaagtttgttttt 45666385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 167
Target Start/End: Original strand, 46195766 - 46195832
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttg-gaaactaaagtttgttttt 167  Q
    ||||||| |||||||||||| |||||||||||||||||||| |||||  ||| ||||||||||||||    
T  46195766 aattacttttatctttttcagtaaaactaattaatgttatcaatttgaaaaattaaagtttgttttt 46195832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 174
Target Start/End: Original strand, 2684696 - 2684768
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgtttttatttaaa 174  Q
    |||||||||||||||||||||||||||  || |||| ||||||||||| ||||||||||||||| || ||||||    
T  2684696 aattactcttatctttttcaataaaac-gataaatgctatctatttggaaaactaaagtttgttattttttaaa 2684768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 38044896 - 38044828
Alignment:
Q  178 taaaacaaagtttgtttcttgttat------cttcaaatttaaacaaaactttgttacaaacaatggtt 240  Q
    |||||||||||||||||||||||||      ||||||||||||| |||| |||||||||||||||||||    
T  38044896 taaaacaaagtttgtttcttgttatttttatcttcaaatttaaataaaattttgttacaaacaatggtt 38044828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 219
Target Start/End: Original strand, 41502560 - 41502685
Alignment:
Q  104 ttactcttatctttttcaataaaactaattaatgttatctatttg-gaaactaaagtttgtttttatttaaac--ag---------taaaacaaagtttg 191  Q
    |||||||||||||||| ||||||| ||||||||||||| ||||||  |||||||||||  ||||| |||||||  ||         ||||||||| ||||    
T  41502560 ttactcttatcttttttaataaaattaattaatgttatatatttgaaaaactaaagtt--tttttttttaaactaagttttttttttaaaacaaaatttg 41502657  T
Q  192 tttcttgttatcttcaaatttaaacaaa 219  Q
    |||||||||||||||| |||||||||||    
T  41502658 tttcttgttatcttcagatttaaacaaa 41502685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 6949223 - 6949271
Alignment:
Q  180 aaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgtta 228  Q
    |||||||||||||||||||||||||||||||| |||||||  |||||||    
T  6949223 aaacaaagtttgtttcttgttatcttcaaattgaaacaaatttttgtta 6949271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 38045432 - 38045496
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaactaaagtttgtttt 166  Q
    |||||||||||| | ||||||||||| ||||||||| ||||||||||||||  ||||||| ||||    
T  38045432 aattactcttatatctttcaataaaagtaattaatgctatctatttggaaaacaaagtttatttt 38045496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 229
Target Start/End: Complemental strand, 24538281 - 24538230
Alignment:
Q  178 taaaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttac 229  Q
    ||||||||| ||||||||||||||||||| |||| |||||||| ||||||||    
T  24538281 taaaacaaaatttgtttcttgttatcttcgaattcaaacaaaattttgttac 24538230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 168
Target Start/End: Original strand, 28130510 - 28130577
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaa-ctaaagtttgttttta 168  Q
    ||||||||||||| |||| ||||||| || |||||||||| || ||||||| ||||||||||||||||    
T  28130510 aattactcttatcctttttaataaaattagttaatgttatgtacttggaaatctaaagtttgttttta 28130577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 229
Target Start/End: Original strand, 30913560 - 30913686
Alignment:
Q  110 ttatctttttcaataaaactaattaatgttatctatttggaaa-ctaaagtttgtttttatttaaac------agtaaaacaaagtttgtttcttgttat 202  Q
    |||| ||||||||||||||||||||| ||||| ||||| |||| ||||||||| ||||| |||          || ||||||||| ||||||||||||||    
T  30913560 ttatgtttttcaataaaactaattaacgttatatatttcgaaaactaaagtttttttttttttttgtttttgaaggaaaacaaagcttgtttcttgttat 30913659  T
Q  203 cttcaaatttaaacaaaactttgttac 229  Q
    ||| |||||||||||||  ||||||||    
T  30913660 cttaaaatttaaacaaatttttgttac 30913686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 229
Target Start/End: Complemental strand, 37371381 - 37371330
Alignment:
Q  178 taaaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttac 229  Q
    ||||||||| ||| |||||||||||||||||||||||| |||| ||||||||    
T  37371381 taaaacaaaatttctttcttgttatcttcaaatttaaataaaattttgttac 37371330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 229
Target Start/End: Original strand, 30912714 - 30912759
Alignment:
Q  184 aaagtttgtttcttgttatcttcaaatttaaacaaaactttgttac 229  Q
    |||||||||||||||||||||| |||||||||||||  ||||||||    
T  30912714 aaagtttgtttcttgttatcttaaaatttaaacaaatatttgttac 30912759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 167
Target Start/End: Complemental strand, 1821655 - 1821591
Alignment:
Q  104 ttactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgttttt 167  Q
    ||||| ||| |||||||| ||||||||||||||| ||||||||||| ||| |||||||| |||||    
T  1821655 ttacttttacctttttcagtaaaactaattaatgatatctatttggaaaattaaagtttattttt 1821591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 168
Target Start/End: Original strand, 23529534 - 23529602
Alignment:
Q  102 aattactcttatctttt-tcaataaaactaattaatgttatctatttgg-aaactaaagtttgttttta 168  Q
    ||||||| ||||||||| ||||||||||||||||||| ||| ||||||| |||||||| ||||| ||||    
T  23529534 aattacttttatcttttttcaataaaactaattaatgctatttatttggaaaactaaaatttgtcttta 23529602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 152
Target Start/End: Complemental strand, 42219092 - 42219056
Alignment:
Q  116 ttttcaataaaactaattaatgttatctatttggaaa 152  Q
    |||||||||||||||||||||||||| ||||||||||    
T  42219092 ttttcaataaaactaattaatgttatatatttggaaa 42219056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 8077973 - 8077931
Alignment:
Q  187 gtttgtttcttgttatcttcaaatttaaacaaaactttgttac 229  Q
    |||||||||||| ||||||||| ||||||||||| ||||||||    
T  8077973 gtttgtttcttgctatcttcaactttaaacaaaattttgttac 8077931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 33808893 - 33808939
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttg 148  Q
    |||||||||||  ||||||||||||| ||||||||||||| ||||||    
T  33808893 aattactcttacatttttcaataaaattaattaatgttatatatttg 33808939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 20782488 - 20782533
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctattt 147  Q
    |||||||||||| |||||||||||||||||| |||| || ||||||    
T  20782488 aattactcttatatttttcaataaaactaataaatgctacctattt 20782533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 131
Target Start/End: Complemental strand, 21342278 - 21342249
Alignment:
Q  102 aattactcttatctttttcaataaaactaa 131  Q
    ||||||||||||||||||||||||||||||    
T  21342278 aattactcttatctttttcaataaaactaa 21342249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 38434304 - 38434239
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttg-gaaactaaagtttgtttt 166  Q
    ||||| |||||| |||||||||||||||||||| || ||| ||||||  |||||||||||| ||||    
T  38434304 aattattcttatatttttcaataaaactaattagtgctatatatttgaaaaactaaagtttttttt 38434239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 135
Target Start/End: Complemental strand, 46016656 - 46016623
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaa 135  Q
    |||||||||||||||||||||| |||||||||||    
T  46016656 aattactcttatctttttcaatcaaactaattaa 46016623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 135
Target Start/End: Original strand, 46250061 - 46250094
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaa 135  Q
    |||||||||||||||||||||| |||||||||||    
T  46250061 aattactcttatctttttcaatcaaactaattaa 46250094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 55343851 - 55343892
Alignment:
Q  178 taaaacaaagtttgtttcttgttatcttcaaatttaaacaaa 219  Q
    ||||||||| |||||||| ||||||||| |||||||||||||    
T  55343851 taaaacaaaatttgtttcatgttatctttaaatttaaacaaa 55343892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 141
Target Start/End: Complemental strand, 46196863 - 46196823
Alignment:
Q  102 aattactcttatcttttt-caataaaactaattaatgttat 141  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  46196863 aattactcttatattttttcaataaaactaattaatgttat 46196823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 1e-43; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 103 - 255
Target Start/End: Original strand, 16196804 - 16196948
Alignment:
Q  103 attactcttatctttttcaataaaactaattaatgttatctatttggaaa-ctaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtta 201  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||         |||||||||||||||||||||     
T  16196804 attactcttatctttttcaataaaactaattgatgttatctaattggaaaactaaagtttgtttttatt---------aaacaaagtttgtttcttgttt 16196894  T
Q  202 tcttcaaatttaaacaaaactttgttacaaacaatggttccaagaagggttaaa 255  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||    
T  16196895 tcttcaaatttaaacaaaattttgtaacaaacaatggttccaagaagagttaaa 16196948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 102 - 247
Target Start/End: Complemental strand, 35793179 - 35793040
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaa-ctaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtt 200  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||| |||||  |||||       |||||||||||||||||||    
T  35793179 aattactcttatctttttcaataaaactaattaatgttgtctatttggaaaactaatgttttttttttcttaaa-------acaaagtttgtttcttgtt 35793087  T
Q  201 atcttcaaatttaaacaaaactttgttacaaacaatggttccaagaa 247  Q
    |||||||||||||||||||| ||||| |||||||||||||| |||||    
T  35793086 atcttcaaatttaaacaaaattttgtaacaaacaatggttctaagaa 35793040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 105 - 255
Target Start/End: Original strand, 4567337 - 4567477
Alignment:
Q  105 tactcttatctttttcaataaaactaattaatgttatctatttggaaa-ctaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgttatc 203  Q
    |||| |||||||||||||||||||||||||||| |||||| ||||||| |||||||||   ||| |||||||        |||||||||||||| |||||    
T  4567337 tacttttatctttttcaataaaactaattaatgctatctagttggaaaactaaagttt---tttctttaaac--------aaagtttgtttcttcttatc 4567425  T
Q  204 ttcaaatttaaacaaaactttgttacaaacaatggttccaagaagggttaaa 255  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  4567426 ttcaaatttaaacaaaattttgttacaaacaatggttccaagaagagttaaa 4567477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 236
Target Start/End: Complemental strand, 10535077 - 10534952
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaact-aaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtt 200  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||| ||| | ||||||| |||||          ||||||| |||||||||||||||    
T  10535077 aattcctcttatctttttcaataaaactaattaatgtaatctatttgaaaaattaaagttttttttt----------taaaacatagtttgtttcttgtt 10534988  T
Q  201 atcttcaaatttaaacaaaactttgttacaaacaat 236  Q
    |||||||||||||| ||||| |||||||||||||||    
T  10534987 atcttcaaatttaaccaaaattttgttacaaacaat 10534952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 96 - 255
Target Start/End: Original strand, 37124186 - 37124338
Alignment:
Q  96 tttgaaaattactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgtttttatttaaacagtaaaacaaagtttgttt 194  Q
    |||| ||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||   ||||||||      | |||||||  || |||    
T  37124186 tttgtaaattactcttatctttttcaataaaactaattaatgctctctatttggaaaactaaagtt--gttttattt------tcaaacaaaaattattt 37124277  T
Q  195 cttgttatcttcaaatttaaacaaaactttgttacaaacaatggttccaagaagggttaaa 255  Q
    ||||||||||||| ||||||||  || ||||||||||||||||||| ||||| | ||||||    
T  37124278 cttgttatcttcacatttaaacttaattttgttacaaacaatggttacaagaggagttaaa 37124338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 106 - 246
Target Start/End: Complemental strand, 3835729 - 3835577
Alignment:
Q  106 actcttatctttttcaataaaactaattaatgttatctatttggaaa-ctaaagtttgtttttatttaaacag--------------taaaacaaagttt 190  Q
    ||||||||||||||||||||  ||||||||| ||||||||||||||| ||||||||||||||| ||||||||               | |||||||||||    
T  3835729 actcttatctttttcaataa--ctaattaatattatctatttggaaaactaaagtttgttttt-tttaaacaaagtttgtttgttttttaaacaaagttt 3835633  T
Q  191 gtttcttgttatcttcaaatttaaacaaaactttgttacaaacaatggttccaaga 246  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||    
T  3835632 gtttcttgttatcttcaaatttaaacaaaattttgttacaaacactggttctaaga 3835577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 8614898 - 8614777
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaa-ctaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtt 200  Q
    |||||||||||| ||||| |||||||||||||| ||||||||||||| ||| |||||   ||||||| |||      ||||||||| |||||||||||||    
T  8614898 aattactcttattttttt-aataaaactaattattgttatctatttgaaaaactaaa---tgttttttttt------taaaacaaaatttgtttcttgtt 8614809  T
Q  201 atcttcaaatttaaacaaaactttgttacaaa 232  Q
    |||||||||||||||||||| |||||||||||    
T  8614808 atcttcaaatttaaacaaaattttgttacaaa 8614777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 39617612 - 39617683
Alignment:
Q  184 aaagtttgtttcttgttatcttcaaatttaaacaaaactttgttacaaacaatggttccaagaagggttaaa 255  Q
    ||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||| ||| ||| ||||||    
T  39617612 aaagtttgttttttgttatcttcaaatttaaacaaaattttgtttcaaacaatggtttcaaaaagagttaaa 39617683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 102 - 229
Target Start/End: Complemental strand, 4963005 - 4962880
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaa-ctaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtt 200  Q
    ||||| |||||| |||||||||||||||||||| || ||| |||||| ||| ||||||||||||| | ||       ||||||||| ||||||| |||||    
T  4963005 aattattcttatatttttcaataaaactaattagtgctatatatttgaaaaactaaagtttgtttgttttgttt---taaaacaaaatttgtttattgtt 4962909  T
Q  201 atcttcaaatttaaacaaaactttgttac 229  Q
    |||||||||||||||||||| ||||||||    
T  4962908 atcttcaaatttaaacaaaattttgttac 4962880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 178 - 236
Target Start/End: Original strand, 12394237 - 12394295
Alignment:
Q  178 taaaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttacaaacaat 236  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||    
T  12394237 taaaacaaagtttgtttcttgttatcatcaaatttaaacaaaattttgttataaacaat 12394295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 102 - 164
Target Start/End: Complemental strand, 14735122 - 14735061
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaactaaagtttgtt 164  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||    
T  14735122 aattactcttatctttttcaataaaactaa-taatgttatcaatttgaaaactaaagtttgtt 14735061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 102 - 229
Target Start/End: Original strand, 25290638 - 25290763
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaa-ctaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtt 200  Q
    ||||| |||||| ||||||||||||||||||||||||  | |||||| ||| ||||||||||||| | ||   |   ||||||||| |||||||| ||||    
T  25290638 aattattcttatatttttcaataaaactaattaatgtcgtatatttgaaaaactaaagtttgtttgtttt---attttaaaacaaaatttgtttcctgtt 25290734  T
Q  201 atcttcaaatttaaacaaaactttgttac 229  Q
    ||| |||||||||||||||| ||||||||    
T  25290735 atcatcaaatttaaacaaaattttgttac 25290763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 2273581 - 2273516
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgtttt 166  Q
    |||||||||||||||||||||||||||| ||||||| ||| ||||||| |||||||||||||||||    
T  2273581 aattactcttatctttttcaataaaacttattaatgctatatatttggaaaactaaagtttgtttt 2273516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 2798623 - 2798685
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttg-gaaactaaagtttgt 163  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||  ||||||||||||||    
T  2798623 aattactcttatctttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgt 2798685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 91 - 141
Target Start/End: Complemental strand, 10026296 - 10026246
Alignment:
Q  91 tacgatttgaaaattactcttatctttttcaataaaactaattaatgttat 141  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  10026296 tacgatttgttaattactcttatctttttcaataaaactaattaatgttat 10026246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 211
Target Start/End: Original strand, 28226566 - 28226667
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttg-gaaactaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtt 200  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||  |||||||||||| ||| | |||         ||||||||||||||||||||    
T  28226566 aattgctcttatctttttcaataaaactaattaatgttatatatttgaaaaactaaagtttttttattttt---------aacaaagtttgtttcttgtt 28226656  T
Q  201 atcttcaaatt 211  Q
    ||||| |||||    
T  28226657 atcttaaaatt 28226667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 179 - 248
Target Start/End: Original strand, 27723403 - 27723471
Alignment:
Q  179 aaaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttacaaacaatggttccaagaag 248  Q
    |||||||| |||||| |||||||| ||||||||||||||||| |||||| |||||||||||| |||||||    
T  27723403 aaaacaaaatttgttccttgttat-ttcaaatttaaacaaaattttgttccaaacaatggtttcaagaag 27723471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 14771409 - 14771361
Alignment:
Q  180 aaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgtta 228  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  14771409 aaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgtta 14771361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 15221861 - 15221813
Alignment:
Q  180 aaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgtta 228  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  15221861 aaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgtta 15221813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 15643353 - 15643413
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagttt 161  Q
    |||||||||||| ||||||||||||||||||||||| ||| ||||||| ||||||||||||    
T  15643353 aattactcttatttttttcaataaaactaattaatgctatatatttggaaaactaaagttt 15643413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 164
Target Start/End: Complemental strand, 1752656 - 1752593
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctattt-ggaaactaaagtttgtt 164  Q
    ||||||| |||||||||||||| |||||||||||| |||||||||| | |||||||||||||||    
T  1752656 aattacttttatctttttcaatcaaactaattaatattatctatttagaaaactaaagtttgtt 1752593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 15643447 - 15643497
Alignment:
Q  178 taaaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgtta 228  Q
    ||||||||| ||||||| ||||||||||||||||||||||||| |||||||    
T  15643447 taaaacaaaatttgtttattgttatcttcaaatttaaacaaaattttgtta 15643497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 167
Target Start/End: Original strand, 4678434 - 4678487
Alignment:
Q  115 tttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgttttt 167  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||| |||||||    
T  4678434 tttttcaataaaactaattaatgttatatatttggaaaactaaagtatgttttt 4678487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 167
Target Start/End: Original strand, 39427421 - 39427486
Alignment:
Q  104 ttactcttatctttttcaataaaact-aattaatgttatctatttgg-aaactaaagtttgttttt 167  Q
    |||||||||||||||| ||||||||| |||||||| ||| ||||||| ||||||||||||||||||    
T  39427421 ttactcttatcttttttaataaaactaaattaatgctatatatttggaaaactaaagtttgttttt 39427486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 43368803 - 43368863
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagttt 161  Q
    ||||||| |||||||||| ||||||||||||||| ||||| ||||||| ||||||||||||    
T  43368803 aattacttttatctttttaaataaaactaattaaagttatatatttggaaaactaaagttt 43368863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 211
Target Start/End: Complemental strand, 36412903 - 36412806
Alignment:
Q  103 attactcttatctttttcaataaaactaattaatgttatctatttg-gaaactaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtta 201  Q
    |||||||||||||||||||| ||||||||||||||||||  |||||  |||||||||||| ||||           ||||||||||||||||||||||||    
T  36412903 attactcttatctttttcaa-aaaactaattaatgttataaatttgaaaaactaaagtttttttt-----------taaaacaaagtttgtttcttgtta 36412816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 167
Target Start/End: Original strand, 39617562 - 39617624
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaactaaagtttgttttt 167  Q
    ||||||| |||||||||||||||||| |||||||||||||   || | ||||||||||||||||||    
T  39617562 aattacttttatctttttcaataaaattaattaatgttat---ttggaaaactaaagtttgttttt 39617624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 229
Target Start/End: Complemental strand, 46672012 - 46671961
Alignment:
Q  178 taaaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttac 229  Q
    ||||||||| ||| ||||||||||||||||||||||||||||  ||||||||    
T  46672012 taaaacaaaatttatttcttgttatcttcaaatttaaacaaatatttgttac 46671961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 27723308 - 27723373
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttg-gaaactaaagtttgtttt 166  Q
    ||||||| |||||||||||| ||||||||||||||| ||||| ||||  ||| |||||||||||||    
T  27723308 aattacttttatctttttcagtaaaactaattaatgctatctgtttgaaaaattaaagtttgtttt 27723373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 167
Target Start/End: Complemental strand, 37072452 - 37072387
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaactaaagtttgttttt 167  Q
    |||||||||||||||||||||||||||| |  |||   ||||||||  ||||||||||||||||||    
T  37072452 aattactcttatctttttcaataaaacttacaaattccatctatttaaaaactaaagtttgttttt 37072387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 39430670 - 39430605
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttg-gaaactaaagtttgtttt 166  Q
    ||||| |||||| |||||||||||||||||||| || ||| ||||||  |||||||||||||||||    
T  39430670 aattattcttatatttttcaataaaactaattagtgctatatatttgaaaaactaaagtttgtttt 39430605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 44550049 - 44550094
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctattt 147  Q
    |||||||||||||||||||| |||||||||||||||  ||||||||    
T  44550049 aattactcttatctttttcattaaaactaattaatgacatctattt 44550094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 219
Target Start/End: Complemental strand, 2271902 - 2271863
Alignment:
Q  180 aaacaaagtttgtttcttgttatcttcaaatttaaacaaa 219  Q
    |||||||||||||||||||||||| | |||||||||||||    
T  2271902 aaacaaagtttgtttcttgttatcctaaaatttaaacaaa 2271863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 163
Target Start/End: Complemental strand, 24394291 - 24394232
Alignment:
Q  105 tactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgt 163  Q
    ||||||||| ||||| ||||||||||| ||||| ||| ||||||| ||||||||||||||    
T  24394291 tactcttatatttttgaataaaactaactaatgatatatatttggaaaactaaagtttgt 24394232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 167
Target Start/End: Complemental strand, 7809264 - 7809198
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgttttt 167  Q
    ||||||| |||||||||| ||||||||||||||||  ||| |||| || |||||||||||| |||||    
T  7809264 aattacttttatctttttaaataaaactaattaatactatgtattaggaaaactaaagtttattttt 7809198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 27229675 - 27229629
Alignment:
Q  119 tcaataaaactaattaatgttatctatttgg-aaactaaagtttgtt 164  Q
    ||||||||||||||||||| |||| |||||| |||||||||||||||    
T  27229675 tcaataaaactaattaatgctatcaatttggaaaactaaagtttgtt 27229629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 39430577 - 39430528
Alignment:
Q  178 taaaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgtta 228  Q
    ||||||||||||||||| ||||||||||| |||| |||||||| |||||||    
T  39430577 taaaacaaagtttgtttattgttatcttc-aattgaaacaaaattttgtta 39430528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 39599759 - 39599693
Alignment:
Q  102 aattactcttatcttttt-caataaaactaattaatgttatctatttg-gaaactaaagtttgtttt 166  Q
    |||||||||||||||||| | |||||||||||||||| ||| ||||||  |||||||||||| ||||    
T  39599759 aattactcttatcttttttcgataaaactaattaatgctatatatttgaaaaactaaagtttttttt 39599693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 24394201 - 24394160
Alignment:
Q  178 taaaacaaagtttgtttcttgttatcttcaaatttaaacaaa 219  Q
    ||||||||| ||| |||||||||||||||| |||||||||||    
T  24394201 taaaacaaaatttatttcttgttatcttcatatttaaacaaa 24394160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 211
Target Start/End: Original strand, 43368891 - 43368924
Alignment:
Q  178 taaaacaaagtttgtttcttgttatcttcaaatt 211  Q
    |||||||||||||||||||||||||||| |||||    
T  43368891 taaaacaaagtttgtttcttgttatcttaaaatt 43368924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 1e-40; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 102 - 255
Target Start/End: Complemental strand, 45273485 - 45273338
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaac-taaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtt 200  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||  |||||||| | ||| ||| ||       |||||||||||||||||||    
T  45273485 aattactcttatctttttcaataaaactaattaatgatatctatttagaaaaataaagtttatattttttttaa-------acaaagtttgtttcttgtt 45273393  T
Q  201 atcttcaaatttaaacaaaactttgttacaaacaatggttccaagaagggttaaa 255  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  45273392 atcttaaaatttaaacaaaactttgttacaaacaatggttccaagaagagttaaa 45273338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 255
Target Start/End: Original strand, 21252600 - 21252745
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaa-ctaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtt 200  Q
    |||||| ||||||||||||||||||| ||||||||| |||||||||| ||| ||||||||| ||||| ||||||||        || || ||||||||||    
T  21252600 aattacacttatctttttcaataaaattaattaatgctatctatttgaaaaactaaagtttatttttctttaaaca--------aaattagtttcttgtt 21252691  T
Q  201 atcttcaaatttaaacaaaactttgttacaaacaatggttccaagaagggttaaa 255  Q
    ||||| |||||||||||||| |||||| |||||||||||||||||||| ||||||    
T  21252692 atctttaaatttaaacaaaa-tttgttgcaaacaatggttccaagaagagttaaa 21252745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 256
Target Start/End: Complemental strand, 38589371 - 38589222
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaa-ctaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtt 200  Q
    ||||||| ||||||||||||||||||  |||||||| ||||||||| |||| |||||  |||||||| |||      | || ||||||||| ||||| ||    
T  38589371 aattacttttatctttttcaataaaatcaattaatgctatctatttagaaaactaaaacttgttttttttt------ttaaccaaagtttgcttcttttt 38589278  T
Q  201 atcttcaaatttaaacaaaactttgttacaaacaatggttccaagaagggttaaat 256  Q
    ||||||| |||||||||||| ||||||||||| ||||||||||||||| |||||||    
T  38589277 atcttcacatttaaacaaaattttgttacaaataatggttccaagaagagttaaat 38589222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 91 - 255
Target Start/End: Complemental strand, 29408872 - 29408692
Alignment:
Q  91 tacgatttgaaaattactcttatctttttcaataaaactaattaatgttatctatttg-gaaactaaagtttgtttttatttaaaca------------- 176  Q
    |||||||||  ||||||| |||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||  ||||||||                 
T  29408872 tacgatttgtcaattacttttatctttttcaataaaagtaattaatgttatctatttgcaaaactaaagtttgttttgttttaaacaaagtttatttgtt 29408773  T
Q  177 --gtaaaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttacaaacaatggttccaagaagggttaaa 255  Q
       | |||||||  |||||||||||||||||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||    
T  29408772 tttttaaacaaaacttgtttcttgttatcttcaaatttaaacaaaattttgttctaaacaatggttccaataagagttaaa 29408692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 229
Target Start/End: Original strand, 44898130 - 44898252
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttg-gaaactaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtt 200  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||| |||| | |||      | |||||||||  ||||||||||    
T  44898130 aattactcttatctttttcaataaaactaattaatgttatatatttgaaaaactaaagttggtttgttttt------ttaaacaaagtgcgtttcttgtt 44898223  T
Q  201 atcttcaaatttaaacaaaactttgttac 229  Q
    |||||||||||||||||||| ||| ||||    
T  44898224 atcttcaaatttaaacaaaattttattac 44898252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 104 - 228
Target Start/End: Original strand, 41541066 - 41541187
Alignment:
Q  104 ttactcttatctttttcaataaaactaattaatgttatctatttg-gaaactaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgttat 202  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||  |||||||||||| |||||  ||      | ||| |||||||||||||||||||    
T  41541066 ttactcttatctttttcaataaaactaattaatgctatatatttgaaaaactaaagtttattttttgtt----ttttaaataaagtttgtttcttgttat 41541161  T
Q  203 cttcaaatttaaacaaaactttgtta 228  Q
    ||| |||||||||||||| |||||||    
T  41541162 cttaaaatttaaacaaaattttgtta 41541187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 102 - 226
Target Start/End: Original strand, 4316717 - 4316848
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaag----tttgttttt--atttaaacagtaaaacaaagtttgttt 194  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    |||||||||   |||      ||||||||||||||||     
T  4316717 aattactcttatctttttcaataaaactaattaatgttatatatttggaaaactaaagtttatttgttttttgtttttgtttttaaaacaaagtttgttc 4316816  T
Q  195 cttgttatcttcaaatttaaacaaaactttgt 226  Q
    ||||||||||| |||||||||||||| |||||    
T  4316817 cttgttatctttaaatttaaacaaaattttgt 4316848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 102 - 164
Target Start/End: Complemental strand, 20171509 - 20171446
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgtt 164  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  20171509 aattactcttatctttttcaataaaactaattaatgttatatatttggaaaactaaagtttgtt 20171446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 96 - 167
Target Start/End: Complemental strand, 158167 - 158095
Alignment:
Q  96 tttgaaaattactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgttttt 167  Q
    |||| |||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||| |||||||||    
T  158167 tttgcaaattactcttatctttttcaataaaactaattaattttatatatttggaaaactaaaatttgttttt 158095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 180 - 255
Target Start/End: Complemental strand, 150254 - 150180
Alignment:
Q  180 aaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttacaaacaatggttccaagaagggttaaa 255  Q
    ||||||||||| ||||||||||||||||| |||||||||||  |||||||||||||||||| ||||||| ||||||    
T  150254 aaacaaagtttatttcttgttatcttcaa-tttaaacaaaaaattgttacaaacaatggtttcaagaagagttaaa 150180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 239
Target Start/End: Complemental strand, 11073926 - 11073871
Alignment:
Q  184 aaagtttgtttcttgttatcttcaaatttaaacaaaactttgttacaaacaatggt 239  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  11073926 aaagtttgtttcttgttattttcaaatttaaacaaaattttgttacaaacaatggt 11073871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 178 - 229
Target Start/End: Complemental strand, 25965854 - 25965803
Alignment:
Q  178 taaaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttac 229  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  25965854 taaaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttac 25965803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 158068 - 158018
Alignment:
Q  178 taaaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgtta 228  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  158068 taaaacaaagtttgtttcttgttaccttcaaatttaaacaaaattttgtta 158018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 152
Target Start/End: Original strand, 33659577 - 33659627
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaa 152  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  33659577 aattactcttatatttttcaataaaactaattaatgttatatatttggaaa 33659627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 167
Target Start/End: Original strand, 33659722 - 33659788
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttg-gaaactaaagtttgttttt 167  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||  ||||| ||||||||||||    
T  33659722 aattactcttatctttttcaataaaactaattaatattatatatttgaaaaactgaagtttgttttt 33659788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 107 - 167
Target Start/End: Complemental strand, 7486381 - 7486320
Alignment:
Q  107 ctcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgttttt 167  Q
    ||||||| ||||||||||||||||||||||||||| ||||||| |||||||||| |||||||    
T  7486381 ctcttatatttttcaataaaactaattaatgttatatatttggaaaactaaagtctgttttt 7486320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 36244106 - 36244041
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgtttt 166  Q
    |||||||||||| ||||| ||||||||||||||||||||| ||||||| |||||||||||| ||||    
T  36244106 aattactcttatattttttaataaaactaattaatgttatatatttggaaaactaaagtttatttt 36244041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 150347 - 150274
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttg-gaaactaaagtttgtttttatttaaaca 176  Q
    ||||||||||||  |||||||||||||||||||||||||| ||||||  ||||||||||||| |||| ||||||||    
T  150347 aattactcttat--ttttcaataaaactaattaatgttatatatttgaaaaactaaagtttgattttttttaaaca 150274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 15507470 - 15507589
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttg-gaaactaaagtttgtt--tttatttaaacagtaaaacaaagtttgtttcttg 198  Q
    |||||||||||||||||||||| ||||||||||||| ||| || |||  |||||||||||||||  ||| |||      ||||||||||||||||| |||    
T  15507470 aattactcttatctttttcaat-aaactaattaatgctatataattgaaaaactaaagtttgtttgtttcttt------taaaacaaagtttgttttttg 15507562  T
Q  199 ttatcttcaaatttaaacaaaactttg 225  Q
    ||||||| ||||| |||||||| ||||    
T  15507563 ttatcttaaaattcaaacaaaattttg 15507589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 225
Target Start/End: Original strand, 27746580 - 27746627
Alignment:
Q  178 taaaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttg 225  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  27746580 taaaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttg 27746627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 229
Target Start/End: Complemental strand, 34424753 - 34424702
Alignment:
Q  178 taaaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttac 229  Q
    ||||||||| ||||||| ||||||||||||||||||||||||| ||||||||    
T  34424753 taaaacaaaatttgttttttgttatcttcaaatttaaacaaaattttgttac 34424702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 167
Target Start/End: Complemental strand, 1770245 - 1770183
Alignment:
Q  106 actcttatctttttcaataaaactaattaatgttatctatttg-gaaactaaagtttgttttt 167  Q
    |||||||  ||||||||||||||||||||||||||| ||||||  ||||||||||||||||||    
T  1770245 actcttaattttttcaataaaactaattaatgttatatatttgaaaaactaaagtttgttttt 1770183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 161
Target Start/End: Original strand, 2218236 - 2218282
Alignment:
Q  115 tttttcaataaaactaattaatgttatctatttggaaactaaagttt 161  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||    
T  2218236 tttttcaataaaactaattaatgatatctatttgaaaactaaagttt 2218282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 167
Target Start/End: Original strand, 11083922 - 11083988
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttg-gaaactaaagtttgttttt 167  Q
    |||| |||| |||||||| ||||||||||||||||||||| ||||||  ||||||||||||||||||    
T  11083922 aatttctctgatcttttttaataaaactaattaatgttatatatttgaaaaactaaagtttgttttt 11083988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 152
Target Start/End: Complemental strand, 32113424 - 32113374
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaa 152  Q
    ||||| |||||| ||||||||||||||||||||||||||| ||||||||||    
T  32113424 aattattcttatatttttcaataaaactaattaatgttatatatttggaaa 32113374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 42872253 - 42872211
Alignment:
Q  187 gtttgtttcttgttatcttcaaatttaaacaaaactttgttac 229  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  42872253 gtttgtttcttgttatcttaaaatttaaacaaaactttgttac 42872211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 255
Target Start/End: Original strand, 1397565 - 1397642
Alignment:
Q  178 taaaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttacaaacaatggttccaagaagggttaaa 255  Q
    ||||||||| |||||||||| ||||||| |||||||||||||| ||||||  ||||| | ||| ||||||| ||||||    
T  1397565 taaaacaaaatttgtttcttattatctttaaatttaaacaaaattttgttcgaaacagtagtttcaagaagtgttaaa 1397642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 244
Target Start/End: Complemental strand, 3309854 - 3309795
Alignment:
Q  184 aaagtttgtttcttgttatcttcaaatttaaacaaaactttgttacaaacaatggttccaa 244  Q
    |||||||||||||  |||||||||||||||||| ||| |||||| ||||||||||||||||    
T  3309854 aaagtttgtttctcattatcttcaaatttaaac-aaattttgttccaaacaatggttccaa 3309795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 16806552 - 16806500
Alignment:
Q  180 aaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttacaaa 232  Q
    ||||||| |||| ||||||||||| |||||||||||||||| |||||||||||    
T  16806552 aaacaaaatttgattcttgttatcctcaaatttaaacaaaattttgttacaaa 16806500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 16845833 - 16845781
Alignment:
Q  180 aaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttacaaa 232  Q
    ||||||| |||| ||||||||||| |||||||||||||||| |||||||||||    
T  16845833 aaacaaaatttgattcttgttatcctcaaatttaaacaaaattttgttacaaa 16845781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 229
Target Start/End: Complemental strand, 4959359 - 4959308
Alignment:
Q  178 taaaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttac 229  Q
    ||||||||  |||||||||||||||||||||||||||| |||| ||||||||    
T  4959359 taaaacaatttttgtttcttgttatcttcaaatttaaataaaattttgttac 4959308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 12411763 - 12411813
Alignment:
Q  178 taaaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgtta 228  Q
    ||||||||| |||||||| | |||||||||||||||||||||| |||||||    
T  12411763 taaaacaaaatttgtttcatcttatcttcaaatttaaacaaaattttgtta 12411813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 12423823 - 12423873
Alignment:
Q  178 taaaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgtta 228  Q
    ||||||||| |||||||| | |||||||||||||||||||||| |||||||    
T  12423823 taaaacaaaatttgtttcatcttatcttcaaatttaaacaaaattttgtta 12423873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 167
Target Start/End: Complemental strand, 20891359 - 20891309
Alignment:
Q  116 ttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgttttt 167  Q
    |||||||||||||||||||||||||  ||||||| ||||||||||||||||||    
T  20891359 ttttcaataaaactaattaatgtta--tatttggaaaactaaagtttgttttt 20891309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 37360356 - 37360401
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctattt 147  Q
    |||||||||||| ||||||| ||||||||||||||||| |||||||    
T  37360356 aattactcttatatttttcactaaaactaattaatgttgtctattt 37360401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 37814535 - 37814580
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctattt 147  Q
    ||||||||||||||||||||||||||||||| |||  |||||||||    
T  37814535 aattactcttatctttttcaataaaactaataaattctatctattt 37814580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 165
Target Start/End: Complemental strand, 3309907 - 3309844
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttg-gaaactaaagtttgttt 165  Q
    ||||||| |||| |||||||||||||||||||| || ||||||||||  ||||||||||||||||    
T  3309907 aattacttttat-tttttcaataaaactaattattgctatctatttgaaaaactaaagtttgttt 3309844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 220
Target Start/End: Complemental strand, 7486284 - 7486252
Alignment:
Q  188 tttgtttcttgttatcttcaaatttaaacaaaa 220  Q
    |||||||||||||||||||||||||||||||||    
T  7486284 tttgtttcttgttatcttcaaatttaaacaaaa 7486252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 11084013 - 11084052
Alignment:
Q  180 aaacaaagtttgtttcttgttatcttcaaatttaaacaaa 219  Q
    ||||||||||||||||||| |||||| |||||||||||||    
T  11084013 aaacaaagtttgtttcttgctatcttaaaatttaaacaaa 11084052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 148
Target Start/End: Complemental strand, 29882233 - 29882190
Alignment:
Q  105 tactcttatctttttcaataaaactaattaatgttatctatttg 148  Q
    ||||||||||||||| |||||||||||| |||||||| ||||||    
T  29882233 tactcttatctttttgaataaaactaatcaatgttatatatttg 29882190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 152
Target Start/End: Complemental strand, 4701031 - 4700981
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaa 152  Q
    ||||||||||||| |||||||||||| ||||||||  ||| ||||||||||    
T  4701031 aattactcttatcgttttcaataaaattaattaatactatatatttggaaa 4700981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 13140958 - 13140913
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttg 148  Q
    ||||||||| || |||||||||||||||||| |||||||||||||||    
T  13140958 aattactct-atatttttcaataaaactaataaatgttatctatttg 13140913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 152
Target Start/End: Original strand, 31193808 - 31193846
Alignment:
Q  114 ctttttcaataaaactaattaatgttatctatttggaaa 152  Q
    ||||||||||||||||||||||| |||| ||||||||||    
T  31193808 ctttttcaataaaactaattaatattatttatttggaaa 31193846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 42756903 - 42756937
Alignment:
Q  178 taaaacaaagtttgtttcttgttatcttcaaattt 212  Q
    ||||||||| |||||||||||||||||||||||||    
T  42756903 taaaacaaaatttgtttcttgttatcttcaaattt 42756937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 7412075 - 7412018
Alignment:
Q  107 ctcttatctttttcaataaaactaattaatgttatctatttggaa-actaaagtttgt 163  Q
    ||||||||||||||||||||||| || ||| |||| |||||||||  |||||||||||    
T  7412075 ctcttatctttttcaataaaacttataaatattatgtatttggaatgctaaagtttgt 7412018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 148
Target Start/End: Original strand, 27746488 - 27746533
Alignment:
Q  103 attactcttatctttttcaataaaactaattaatgttatctatttg 148  Q
    |||||| |||| ||||||||||||||||||||||| ||| ||||||    
T  27746488 attacttttatatttttcaataaaactaattaatgctatatatttg 27746533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 42756810 - 42756855
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctattt 147  Q
    ||||| |||||| ||||||||||||||||||||||| ||| |||||    
T  42756810 aattattcttatatttttcaataaaactaattaatgctatatattt 42756855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 229
Target Start/End: Original strand, 33659802 - 33659842
Alignment:
Q  189 ttgtttcttgttatcttcaaatttaaacaaaactttgttac 229  Q
    |||||||||||||||||  ||||||||||||| ||||||||    
T  33659802 ttgtttcttgttatcttacaatttaaacaaaattttgttac 33659842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 34424838 - 34424782
Alignment:
Q  110 ttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgttt 165  Q
    |||| |||||||| ||||||||||||| |||| ||||||| |||| |||||||||||    
T  34424838 ttatatttttcaacaaaactaattaatattatatatttggaaaacaaaagtttgttt 34424782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 6e-40; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 102 - 255
Target Start/End: Complemental strand, 36320038 - 36319891
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaa-ctaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtt 200  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||| |||      | |||||||||||||||||||||    
T  36320038 aattactcttatctttttcaataaaactaattaatgctatctatttggaaaactaatgtttgttttttttt------ttaaacaaagtttgtttcttgtt 36319945  T
Q  201 atcttcaaatttaaacaaaactttgttacaaacaatggttccaagaagggttaaa 255  Q
    |||||||||||||||| ||| ||||||||||||||| ||||||| ||| ||||||    
T  36319944 atcttcaaatttaaac-aaagtttgttacaaacaatagttccaataagagttaaa 36319891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 102 - 255
Target Start/End: Complemental strand, 13254828 - 13254683
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttgga-aactaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtt 200  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| || || ||         ||||||| |||||||||| ||    
T  13254828 aattactcttatctttttcaataaaactaattaatgctatctatttggagaactaaagtttattattttt---------aaacaaaatttgtttcttatt 13254738  T
Q  201 atcttcaaatttaaacaaaactttgttacaaacaatggttccaagaagggttaaa 255  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||||| ||||||    
T  13254737 atcttcaaatttaaataaaattttgttacaaacaatggtttcaagaagagttaaa 13254683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 2655732 - 2655844
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtt 200  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||| | ||| |||      ||||||||| |||||||||||||    
T  2655732 aattactcttatatttttcaataaaactaattaatgttatatatttggaaaactaaagtttttattttttt------taaaacaaaatttgtttcttgtt 2655825  T
Q  201 atcttcaaatttaaacaaa 219  Q
    |||||||||||||||||||    
T  2655826 atcttcaaatttaaacaaa 2655844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 104 - 248
Target Start/End: Complemental strand, 6295814 - 6295678
Alignment:
Q  104 ttactcttatctttttcaataaaactaattaatgttatctatttggaaactaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgttatc 203  Q
    ||||| |||||||||| ||||||||||||||||| |||||||||| |||   || ||| ||||| ||||||||        || ||||||||||||||||    
T  6295814 ttacttttatctttttaaataaaactaattaatgctatctatttgaaaaactaattttttttttttttaaaca--------aaatttgtttcttgttatc 6295723  T
Q  204 ttcaaatttaaacaaaactttgttacaaacaatggttccaagaag 248  Q
    ||||||||||||||||| |||||| ||||||| ||||||||||||    
T  6295722 ttcaaatttaaacaaaattttgttgcaaacaacggttccaagaag 6295678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 104 - 230
Target Start/End: Original strand, 52414961 - 52415079
Alignment:
Q  104 ttactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgttat 202  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||| ||         ||||||| |||||||||| ||||    
T  52414961 ttactcttatcttttttaataaaactaattaatgttatatatttggaaaactaaagtttgtttttttt---------aaacaaaatttgtttcttcttat 52415051  T
Q  203 cttcaaatttaaacaaaactttgttaca 230  Q
    ||||| |||||||||||| |||||||||    
T  52415052 cttcagatttaaacaaaattttgttaca 52415079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 234
Target Start/End: Original strand, 39386714 - 39386836
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaac-taaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtt 200  Q
    ||||||||||||||||||||||||  |||||||||   |||||||||||||  |||||||| ||||| ||         |||||||||||||||||||||    
T  39386714 aattactcttatctttttcaataa--ctaattaatacaatctatttggaaaaataaagtttatttttttt---------aaacaaagtttgtttcttgtt 39386802  T
Q  201 atcttcaaatttaaacaaaactttgttacaaaca 234  Q
    |||||||||||||||||||| |||||||||||||    
T  39386803 atcttcaaatttaaacaaaattttgttacaaaca 39386836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 1674838 - 1674714
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttg-gaaactaaagtttgtttttat--ttaaacagtaaaacaaagtttgtttcttg 198  Q
    ||||| |||||| ||||||||||||||||||||||||||| ||||||  |||||||||||||||||| |  ||      ||||| ||| |||||||||||    
T  1674838 aattattcttatatttttcaataaaactaattaatgttatatatttgaaaaactaaagtttgtttttttggtt-----ttaaaataaaatttgtttcttg 1674744  T
Q  199 ttatcttcaaatttaaacaaaactttgtta 228  Q
    ||||||||||||||||| |||| |||||||    
T  1674743 ttatcttcaaatttaaataaaattttgtta 1674714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 102 - 167
Target Start/End: Complemental strand, 10101739 - 10101674
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgttttt 167  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||    
T  10101739 aattactcttatctttttcaataaaactaa-taatgctatctatttggaaaactaaagtttgttttt 10101674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 104 - 167
Target Start/End: Complemental strand, 40519266 - 40519202
Alignment:
Q  104 ttactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgttttt 167  Q
    |||||||||||||||| ||||||||||||||||| ||| ||||||| ||||||||||||||||||    
T  40519266 ttactcttatcttttttaataaaactaattaatgctatatatttggaaaactaaagtttgttttt 40519202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 219
Target Start/End: Original strand, 32769020 - 32769124
Alignment:
Q  108 tcttatctttttcaataaaactaattaatgttatctatttg-gaaactaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgttatcttc 206  Q
    |||||||||||| ||||||||||||||||| ||| ||||||  |||||||||||| |||   |||||     |||||||| |||||||||||||||||||    
T  32769020 tcttatcttttttaataaaactaattaatgatatatatttgaaaaactaaagtttattt---tttaa-----aaaacaaaatttgtttcttgttatcttc 32769111  T
Q  207 aaatttaaacaaa 219  Q
    | |||||||||||    
T  32769112 atatttaaacaaa 32769124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 219
Target Start/End: Original strand, 4671439 - 4671546
Alignment:
Q  104 ttactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgttat 202  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||| |||||||| |||||||||          ||||||||| |||||||||| ||||    
T  4671439 ttactcttatcttttttaataaaactaattaatactatatatttggaaaactaaaatttgttttt---------ttaaaacaaaatttgtttcttattat 4671529  T
Q  203 cttcaaatttaaacaaa 219  Q
    ||||| |||||||||||    
T  4671530 cttcagatttaaacaaa 4671546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 167
Target Start/End: Original strand, 30280058 - 30280122
Alignment:
Q  104 ttactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgttttt 167  Q
    ||||||||||||| || ||||||||||||||||||| | ||||||| ||||||||||||||||||    
T  30280058 ttactcttatcttctttaataaaactaattaatgttgtatatttggaaaactaaagtttgttttt 30280122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 229
Target Start/End: Complemental strand, 788260 - 788209
Alignment:
Q  178 taaaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttac 229  Q
    ||||||||| ||| ||||||||||||||||||||||||||||| ||||||||    
T  788260 taaaacaaaatttatttcttgttatcttcaaatttaaacaaaattttgttac 788209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 167
Target Start/End: Complemental strand, 788354 - 788288
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgttttt 167  Q
    ||||| ||| || ||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||    
T  788354 aattattctaatatttttcaataaaactaattaatgttatatatttggaaaaataaagtttgttttt 788288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 23699495 - 23699437
Alignment:
Q  104 ttactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagttt 161  Q
    |||| ||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||    
T  23699495 ttacgcttatctttttcaataaaactaattaatgctatatatttggaaaactaaagttt 23699437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 229
Target Start/End: Complemental strand, 4396054 - 4396005
Alignment:
Q  180 aaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttac 229  Q
    ||||||||||||||||| |||| ||| |||||||||||||||||||||||    
T  4396054 aaacaaagtttgtttctcgttagcttaaaatttaaacaaaactttgttac 4396005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 164
Target Start/End: Original strand, 52281747 - 52281800
Alignment:
Q  112 atctttttcaataaaactaattaatgttatctattt-ggaaactaaagtttgtt 164  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||||||||    
T  52281747 atctttttcaataaaactaattaatgttatctatttaaaaaactaaagtttgtt 52281800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 39157128 - 39157224
Alignment:
Q  117 tttcaataaaactaattaatgttatctatttg-gaaactaaagtttg-tttttatttaaacagtaaaacaaagtttgtttcttgttatcttcaaatt 211  Q
    |||||||| |||||||||||||||| ||||||  ||||||||||||| |||||| | ||| | ||||| ||| |||||||||| ||||||| |||||    
T  39157128 tttcaatagaactaattaatgttatatatttgaaaaactaaagtttgttttttaataaaaaaataaaataaaatttgtttcttattatcttaaaatt 39157224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 229
Target Start/End: Complemental strand, 23699403 - 23699352
Alignment:
Q  178 taaaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttac 229  Q
    ||||||||| | |||||||||||||||||| |||||||||||| ||||||||    
T  23699403 taaaacaaaatgtgtttcttgttatcttcagatttaaacaaaattttgttac 23699352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 3901042 - 3901107
Alignment:
Q  103 attactcttatctttttcaataaaactaattaatgttatctatttg-gaaactaaagtttgttttta 168  Q
    |||||||||||||||||||| ||||||||||||||||||  |||||  |||||||||||| ||||||    
T  3901042 attactcttatctttttcaa-aaaactaattaatgttataaatttgaaaaactaaagttttttttta 3901107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 10430591 - 10430545
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttg 148  Q
    |||||||||||||||||| ||||||||||||||||| ||| ||||||    
T  10430591 aattactcttatcttttttaataaaactaattaatgctatatatttg 10430545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 152
Target Start/End: Complemental strand, 11238314 - 11238264
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaa 152  Q
    ||||| |||||| ||||||||||||||||||||||| ||| ||||||||||    
T  11238314 aattattcttatatttttcaataaaactaattaatgatatatatttggaaa 11238264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 23913283 - 23913344
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgt 163  Q
    |||||| ||||||||||||||||||||||| |||||||| |||||||| |||||||| |||||    
T  23913283 aattacccttatctttttcaataaaactaa-taatgttaactatttggtaaactaaattttgt 23913344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 43021152 - 43021198
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttg 148  Q
    |||||||||||| ||| ||||||||||||||||||||||| ||||||    
T  43021152 aattactcttatatttatcaataaaactaattaatgttatatatttg 43021198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 50488828 - 50488763
Alignment:
Q  103 attactcttatctttttcaataaaactaattaatgttatctatttg-gaaactaaagtttgttttta 168  Q
    |||||||||||||||||||| ||||||||||||||||||  |||||  |||||||||||| ||||||    
T  50488828 attactcttatctttttcaa-aaaactaattaatgttataaatttgaaaaactaaagttttttttta 50488763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 19269823 - 19269864
Alignment:
Q  178 taaaacaaagtttgtttcttgttatcttcaaatttaaacaaa 219  Q
    |||||||||||||| ||||||||||||||||||| |||||||    
T  19269823 taaaacaaagtttgcttcttgttatcttcaaattgaaacaaa 19269864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 31623180 - 31623050
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaa-ctaaagtttgtttttat---ttaaacagtaaaacaaagtttgtttctt 197  Q
    ||||| |||||| |||||| |||||| ||||||||||||| ||||| |||| ||||| ||||||||| |   ||      ||||||||| ||||||||||    
T  31623180 aattattcttatatttttccataaaattaattaatgttatatatttcgaaaactaaaatttgtttttttaagttttgttttaaaacaaaatttgtttctt 31623081  T
Q  198 gttatcttcaaatttaaacaaaactttgtta 228  Q
     ||||||| |||||||||||||  |||||||    
T  31623080 cttatctttaaatttaaacaaatttttgtta 31623050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 228
Target Start/End: Complemental strand, 23697704 - 23697658
Alignment:
Q  183 caaagtttgtttctt-gttatcttcaaatttaaacaaaactttgtta 228  Q
    |||| |||||||||| ||||||||||||||||||||||| |||||||    
T  23697704 caaaatttgtttctttgttatcttcaaatttaaacaaaattttgtta 23697658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 229
Target Start/End: Complemental strand, 1394828 - 1394791
Alignment:
Q  192 tttcttgttatcttcaaatttaaacaaaactttgttac 229  Q
    |||||||||||||| |||||||||||||| ||||||||    
T  1394828 tttcttgttatcttaaaatttaaacaaaattttgttac 1394791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 21967226 - 21967181
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctattt 147  Q
    ||||||||| |||||||||| |||||||||||||||  ||||||||    
T  21967226 aattactctcatctttttcattaaaactaattaatgacatctattt 21967181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 229
Target Start/End: Complemental strand, 37710456 - 37710411
Alignment:
Q  184 aaagtttgtttcttgttatcttcaaatttaaacaaaactttgttac 229  Q
    ||||||||||| ||| ||||||||||||||||||||| ||| ||||    
T  37710456 aaagtttgttttttggtatcttcaaatttaaacaaaattttcttac 37710411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 176
Target Start/End: Complemental strand, 1454377 - 1454314
Alignment:
Q  113 tctttttcaataaaactaattaatgttatctattt-ggaaactaaagtttgtttttatttaaaca 176  Q
    |||||||||||||||||||||||  ||||| |||| | ||||| |||||||||||| ||||||||    
T  1454377 tctttttcaataaaactaattaaaattatccatttagaaaactcaagtttgttttt-tttaaaca 1454314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 1e-37; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 102 - 255
Target Start/End: Original strand, 25056510 - 25056666
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaa-ctaaagtttgtttttatttaaacagta---aaacaaagtttgtttctt 197  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||| ||   |||   |    ||||||||||||||||||    
T  25056510 aattactcttatctttttcaataaaactaattaatgctatctatttggaaaactaaagttt-tttctaaacaaagtttttttaaacaaagtttgtttctt 25056608  T
Q  198 gttatcttcaaatttaaacaaaactttgttacaaacaatggttccaagaagggttaaa 255  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||    
T  25056609 gttatcttcaaatttaaacaaaattttgttacaaacaatgattccaagaagagttaaa 25056666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 102 - 245
Target Start/End: Original strand, 8049199 - 8049334
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtt 200  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||         ||||||| |||||||||||||    
T  8049199 aattactcttatctttttcaataaaactaattaatgatatctatttggaaaactaaagtttgtttttctt---------aaacaaaatttgtttcttgtt 8049289  T
Q  201 atcttcaaatttaaacaaaactttgttacaaacaatggttccaag 245  Q
    ||||||| |||| |||  || ||||||||||||||||||||||||    
T  8049290 atcttcacattttaacgtaattttgttacaaacaatggttccaag 8049334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 96 - 229
Target Start/End: Original strand, 23410497 - 23410621
Alignment:
Q  96 tttgaaaattactcttatctttttcaataaaactaattaatgttatctatttgga-aactaaagtttgtttttatttaaacagtaaaacaaagtttgttt 194  Q
    |||| |||||||| |||||||||| ||||||||||||||||||||| |||||||| | ||||||||| ||||| ||          ||||||||||||||    
T  23410497 tttgcaaattacttttatcttttttaataaaactaattaatgttatatatttggatagctaaagtttttttttttt----------aacaaagtttgttt 23410586  T
Q  195 cttgttatcttcaaatttaaacaaaactttgttac 229  Q
    ||||||||||| |||||||||||||| ||||||||    
T  23410587 cttgttatcttaaaatttaaacaaaattttgttac 23410621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 102 - 229
Target Start/End: Complemental strand, 7972702 - 7972584
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaa-ctaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtt 200  Q
    ||||| ||| || ||||||||||||||||||||||||||| |||||| ||| ||||||||||||||| |          ||||||| |||||||||||||    
T  7972702 aattattctaatatttttcaataaaactaattaatgttatatatttgaaaaactaaagtttgttttttt----------aaacaaaatttgtttcttgtt 7972613  T
Q  201 atcttcaaatttaaacaaaactttgttac 229  Q
    |||||||||||||||||||| ||||||||    
T  7972612 atcttcaaatttaaacaaaattttgttac 7972584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 9353188 - 9353259
Alignment:
Q  184 aaagtttgtttcttgttatcttcaaatttaaacaaaactttgttacaaacaatggttccaagaagggttaaa 255  Q
    ||||||||||| |||||||||||||||||||| |||| ||||||||||||||||| ||||||||| ||||||    
T  9353188 aaagtttgtttgttgttatcttcaaatttaaataaaattttgttacaaacaatggctccaagaagagttaaa 9353259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 102 - 229
Target Start/End: Original strand, 4665898 - 4666023
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaa-ctaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtt 200  Q
    |||||||||||| ||||| ||||||||||||||||| ||| |||||| ||| ||||||||||||| | ||       ||||||||| |||||||||||||    
T  4665898 aattactcttatatttttaaataaaactaattaatgctatatatttgaaaaactaaagtttgtttgttttgttt---taaaacaaaatttgtttcttgtt 4665994  T
Q  201 atcttcaaatttaaacaaaactttgttac 229  Q
    ||||| |||||||||||||| ||||||||    
T  4665995 atctttaaatttaaacaaaattttgttac 4666023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 102 - 167
Target Start/End: Complemental strand, 6111193 - 6111127
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgttttt 167  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  6111193 aattactcttatctttttaaataaaactaattaatgttatatatttggaaaactaaagtttgttttt 6111127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 255
Target Start/End: Complemental strand, 14093856 - 14093688
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaa-ctaaagtttgtttttatttaaacag----------------taaaaca 184  Q
    |||||||||||||||||||||||||||||||||||| |||| |||| |||| ||||||||| ||||| ||||||||                 | |||||    
T  14093856 aattactcttatctttttcaataaaactaattaatgctatcgattttgaaaactaaagtttattttt-tttaaacaaagtttgcttgttttttttaaaca 14093758  T
Q  185 aagtttgtttcttgttatcttcaaatttaaacaaaactttgttacaaacaatggttccaagaagggttaaa 255  Q
    | |||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||| ||| ||||||    
T  14093757 acgtttgtttcttgttatcttctaatt-aaacaaaattttgttacaaacaatggttccaataagagttaaa 14093688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 229
Target Start/End: Original strand, 8460946 - 8460997
Alignment:
Q  178 taaaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttac 229  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  8460946 taaaacaaagtttgtttcttgttatcttaaaatttaaacaaaactttgttac 8460997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 178 - 229
Target Start/End: Complemental strand, 21527301 - 21527250
Alignment:
Q  178 taaaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttac 229  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  21527301 taaaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttac 21527250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 4122801 - 4122847
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttg 148  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||    
T  4122801 aattactcttatctttttcaataaaattaattaatgttatctatttg 4122847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 229
Target Start/End: Complemental strand, 9095744 - 9095694
Alignment:
Q  179 aaaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttac 229  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  9095744 aaaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttac 9095694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 9353140 - 9353186
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttg 148  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  9353140 aattactcttatctttttcaataaaactaattaatgctatctatttg 9353186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 167
Target Start/End: Original strand, 34889081 - 34889147
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttg-gaaactaaagtttgttttt 167  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||  ||| ||||||||||||||    
T  34889081 aattactcttatctttttcaataaaactaattattgttatatatttgaaaaattaaagtttgttttt 34889147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 167
Target Start/End: Complemental strand, 26252659 - 26252595
Alignment:
Q  104 ttactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgttttt 167  Q
    |||||||||||||||| ||||||||||||||||| ||| ||||||| ||| ||||||||||||||    
T  26252659 ttactcttatcttttttaataaaactaattaatgctatatatttggaaaaataaagtttgttttt 26252595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 9095839 - 9095765
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgtttttatttaaaca 176  Q
    ||||| |||||| ||||||||||||||||||||||| ||| ||||||| |||||||| ||||||||| ||||||||    
T  9095839 aattattcttatatttttcaataaaactaattaatgctatatatttggaaaactaaaatttgttttt-tttaaaca 9095765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 152
Target Start/End: Complemental strand, 2437905 - 2437855
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaa 152  Q
    ||||| |||||| ||||||||||||||||||||||| ||||||||||||||    
T  2437905 aattattcttatttttttcaataaaactaattaatgatatctatttggaaa 2437855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 4184768 - 4184818
Alignment:
Q  178 taaaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgtta 228  Q
    ||||||||| |||||||||||||||||| |||||||||||||| |||||||    
T  4184768 taaaacaaaatttgtttcttgttatctttaaatttaaacaaaattttgtta 4184818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 229
Target Start/End: Complemental strand, 6111100 - 6111051
Alignment:
Q  180 aaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttac 229  Q
    |||||||||||||||||||||||||||||| ||||| |||| ||||||||    
T  6111100 aaacaaagtttgtttcttgttatcttcaaacttaaataaaattttgttac 6111051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 2e-36; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 102 - 255
Target Start/End: Original strand, 17201246 - 17201403
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaa-ctaaagtttgtttttatttaaacagta----aaacaaagtttgtttct 196  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||| ||   |||   |     |||||||||||||||||    
T  17201246 aattactcttatctttttcaataaaactaattaatgctatctatttggaaaactaaagttt-tttctaaacaaagttttttttaaacaaagtttgtttct 17201344  T
Q  197 tgttatcttcaaatttaaacaaaactttgttacaaacaatggttccaagaagggttaaa 255  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||    
T  17201345 tgttatcttcaaatttaaacaaaattttgttacaaacaatgattccaagaagagttaaa 17201403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 105 - 255
Target Start/End: Original strand, 1583481 - 1583622
Alignment:
Q  105 tactcttatctttttcaataaaactaattaatgttatctatttggaaa-ctaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgttatc 203  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| |         |||||||||||||||| ||||||||    
T  1583481 tactcttgtctttttcaataaaactaattaatgctatctatttggaaaactaaagttttttttttt---------aaaacaaagtttgttttttgttatc 1583571  T
Q  204 ttcaaatttaaacaaaactttgttacaaacaatggttccaagaagggttaaa 255  Q
    |||||| |||||||||| ||||||||||||||||||| ||||||| ||||||    
T  1583572 ttcaaacttaaacaaaattttgttacaaacaatggtt-caagaagagttaaa 1583622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 102 - 255
Target Start/End: Complemental strand, 8544799 - 8544659
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaa-ctaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtt 200  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||| ||| | ||| |||              |||||||||||||||||||||    
T  8544799 aattactcttatctttttcaataaaactaattaacgttatttatttggaaaactacatttttttt--------------aaacaaagtttgtttcttgtt 8544714  T
Q  201 atcttcaaatttaaacaaaactttgttacaaacaatggttccaagaagggttaaa 255  Q
    ||||||||||| |||||||| ||||||||||||||||||| ||||||| ||||||    
T  8544713 atcttcaaattcaaacaaaattttgttacaaacaatggtttcaagaagagttaaa 8544659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 102 - 218
Target Start/End: Original strand, 19924907 - 19925013
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaactaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtta 201  Q
    ||||| |||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||          ||||||||| ||||||||||||||    
T  19924907 aattattcttatctttttcaataaaactaattcatgttatatatttgaaaactaaagtttgttttt----------taaaacaaaatttgtttcttgtta 19924996  T
Q  202 tcttcaaatttaaacaa 218  Q
    |||||||||||||||||    
T  19924997 tcttcaaatttaaacaa 19925013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 218
Target Start/End: Original strand, 19922163 - 19922263
Alignment:
Q  108 tcttatctttttcaataaaactaattaatgttatctatttggaaactaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgttatcttca 207  Q
    |||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||          ||||||||| ||||||||||||||||||||    
T  19922163 tcttatctttttcaataaaactaattcatgttatatatttgaaaactaaagtttgttttt----------taaaacaaaatttgtttcttgttatcttca 19922252  T
Q  208 aatttaaacaa 218  Q
    |||||||||||    
T  19922253 aatttaaacaa 19922263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 124 - 255
Target Start/End: Complemental strand, 42674126 - 42674002
Alignment:
Q  124 aaaactaattaatgttatctatttggaaa-ctaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgttatcttcaaatttaaacaaaact 222  Q
    |||||||||| |||||||||||||||||| ||||||||| ||||| ||||||       |||||||||||||||||||||||||||||||||| |||| |    
T  42674126 aaaactaattgatgttatctatttggaaaactaaagtttttttttttttaaa-------acaaagtttgtttcttgttatcttcaaatttaaataaaatt 42674034  T
Q  223 ttgttacaaacaatggttccaagaagggttaaa 255  Q
    |||||||||  ||| ||||||||||| ||||||    
T  42674033 ttgttacaagaaat-gttccaagaagagttaaa 42674002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 229
Target Start/End: Original strand, 16365751 - 16365871
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaactaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtta 201  Q
    ||||| |||||| |||||||||||||||||||| || ||| ||||||||||||||||||||||||   |        |||||||| ||||||||||||||    
T  16365751 aattattcttatatttttcaataaaactaattagtgctatatatttggaaactaaagtttgttttgtct-------caaaacaaaatttgtttcttgtta 16365843  T
Q  202 tcttcaaatttaaacaaaactttgttac 229  Q
    ||||||||||||||||||| ||||||||    
T  16365844 tcttcaaatttaaacaaaattttgttac 16365871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 218
Target Start/End: Original strand, 19931856 - 19931962
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaactaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtta 201  Q
    ||||| |||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||          ||||||||| ||||||||||||||    
T  19931856 aattattcttatctttttcaataaaactaattcatgttatatatttgaaaactaaagtttgttttt----------taaaacaaaatttgtttcttgtta 19931945  T
Q  202 tcttcaaatttaaacaa 218  Q
    |||||||||||| ||||    
T  19931946 tcttcaaatttagacaa 19931962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 180 - 247
Target Start/End: Complemental strand, 17202388 - 17202321
Alignment:
Q  180 aaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttacaaacaatggttccaagaa 247  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  17202388 aaacaaagttggtttcttgttatcttcaaatttaaacaaaattttgttccaaacaatggttccaagaa 17202321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 115 - 255
Target Start/End: Original strand, 32474209 - 32474361
Alignment:
Q  115 tttttcaataaaactaattaatgttatctatttggaaact-aaagtttgtttttatttaaacag-------------taaaacaaagtttgtttcttgtt 200  Q
    ||||||||||||||||||||||| |||||||||||||| | |||||||||||||  |||||||              ||| |||||||||||||||||||    
T  32474209 tttttcaataaaactaattaatgctatctatttggaaaattaaagtttgttttt--ttaaacaaagtttttttcttttaagacaaagtttgtttcttgtt 32474306  T
Q  201 atcttcaaatttaaacaaaactttgttacaaacaatggttccaagaagggttaaa 255  Q
    ||||||||||||||| |||| |||||||||||||||||||| || ||| ||||||    
T  32474307 atcttcaaatttaaataaaattttgttacaaacaatggttctaaaaagagttaaa 32474361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 180 - 255
Target Start/End: Complemental strand, 18413365 - 18413290
Alignment:
Q  180 aaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttacaaacaatggttccaagaagggttaaa 255  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||||||||  |||||| ||||||| ||||||    
T  18413365 aaacacagtttgtttcttgttatcttcaaatttaaacaaaattttgttacaaatgatggtttcaagaagagttaaa 18413290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 102 - 229
Target Start/End: Original strand, 39614852 - 39614976
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaact-aaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtt 200  Q
    ||||||||||||||||||||| |||||||||||||| ||| |||||| ||| | ||||||||||| | |||      | |||||||||||||||||| ||    
T  39614852 aattactcttatctttttcaacaaaactaattaatgctatatatttgaaaaattaaagtttgtttgttttttt----ttaaacaaagtttgtttcttatt 39614947  T
Q  201 atcttcaaatttaaacaaaactttgttac 229  Q
    |||||||||||||||||||| | ||||||    
T  39614948 atcttcaaatttaaacaaaattgtgttac 39614976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 102 - 167
Target Start/End: Complemental strand, 17202895 - 17202829
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgttttt 167  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  17202895 aattacttttatctttatcaataaaactaattaatgttatctatttggaaaactaaagtttgttttt 17202829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 255
Target Start/End: Original strand, 6428276 - 6428400
Alignment:
Q  122 ataaaactaattaatgttatctatttggaaact-aaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgttatcttcaaatttaaacaaaa 220  Q
    |||||||||||||||| |||||||||| ||| | |||||||||||||   ||||      |||||||||||||| |||||||||| |||||| |||||||    
T  6428276 ataaaactaattaatgctatctatttgaaaaattaaagtttgttttt---taaa------aacaaagtttgtttgttgttatctttaaattttaacaaaa 6428366  T
Q  221 ctttgttacaaacaatggttccaagaagggttaaa 255  Q
     ||||||||||||||||||| ||||||| ||||||    
T  6428367 ttttgttacaaacaatggtt-caagaagagttaaa 6428400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 255
Target Start/End: Complemental strand, 36437410 - 36437270
Alignment:
Q  102 aattactcttatctttttcaataaaactaa-ttaatgttatctatttggaaactaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtt 200  Q
    |||||||||||||||||||||||||||||| |||||| ||||| |||||||   |||||||   ||||||         |||||||||||||||||  ||    
T  36437410 aattactcttatctttttcaataaaactaaattaatgctatctctttggaac--aaagttt---tttatt---------aaacaaagtttgtttctcatt 36437325  T
Q  201 atcttcaaatttaaacaaaactttgttacaaacaatggttccaagaagggttaaa 255  Q
    |||||||||||||||||||| ||||||| | |||||||||| |||||| ||||||    
T  36437324 atcttcaaatttaaacaaaattttgttatagacaatggttctaagaagagttaaa 36437270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 178 - 248
Target Start/End: Complemental strand, 11992190 - 11992120
Alignment:
Q  178 taaaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttacaaacaatggttccaagaag 248  Q
    ||||||||||||| ||||||||||||| ||||||||||||||| ||| || |||| |||||||||||||||    
T  11992190 taaaacaaagtttatttcttgttatctccaaatttaaacaaaattttcttccaaaaaatggttccaagaag 11992120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 229
Target Start/End: Complemental strand, 32718043 - 32717928
Alignment:
Q  108 tcttatctttttcaataaaactaattaatgttatctatttggaaa-ctaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgttatcttc 206  Q
    |||||| ||||||||| ||||||||||||| ||| |||||| ||| ||||||||||||||  ||||||       ||||  ||| |||||||||||||||    
T  32718043 tcttatatttttcaattaaactaattaatgctatatatttgaaaaactaaagtttgttttgttttaaa-------acaatatttatttcttgttatcttc 32717951  T
Q  207 aaatttaaacaaaactttgttac 229  Q
    |||||||||||||| ||||||||    
T  32717950 aaatttaaacaaaattttgttac 32717928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 17591666 - 17591728
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgtt 164  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||    
T  17591666 aattactcttatctttttcaataaaactaa-taatgttatcaatttggaaaactaaagtttgtt 17591728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 255
Target Start/End: Complemental strand, 12436800 - 12436660
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttg-gaaactaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtt 200  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||  |||||| ||||| |||||            ||||||| || ||||||||||    
T  12436800 aattactcttatatttttcaataaaactaattaatgctatctatttgaaaaactacagttttttttt------------aaacaaaattcgtttcttgtt 12436713  T
Q  201 atcttcaaatttaaacaaaactttgttacaaacaatggttccaagaagggttaaa 255  Q
    ||||||||||||||||  || ||| |||||| |||||||  ||||||| ||||||    
T  12436712 atcttcaaatttaaac--aatttttttacaatcaatggtatcaagaagagttaaa 12436660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 167
Target Start/End: Original strand, 14654947 - 14655013
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgttttt 167  Q
    ||||| |||||| ||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||    
T  14654947 aattattcttatatttttcaataaaactaattaatgctatatatttggaaaactaaagtttgttttt 14655013  T

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Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 1590169 - 1590265
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttg-gaaactaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtt 200  Q
    |||||||||||||||||| ||||||||||||||||| ||| ||||||  |||||||||||||||| | |||    | | |||||||||||||||||||||    
T  1590169 aattactcttatcttttttaataaaactaattaatgctatatatttgaaaaactaaagtttgtttgttttt---tatttaaacaaagtttgtttcttgtt 1590265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 11825498 - 11825450
Alignment:
Q  104 ttactcttatctttttcaataaaactaattaatgttatctatttggaaa 152  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||    
T  11825498 ttactcttatctttttcaataaaactaattaatgttgtatatttggaaa 11825450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 167
Target Start/End: Original strand, 20201658 - 20201722
Alignment:
Q  104 ttactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgttttt 167  Q
    ||||| |||| ||||||||||||||||||||||||||| ||||||| |||||||||||| |||||    
T  20201658 ttacttttatatttttcaataaaactaattaatgttatatatttggaaaactaaagtttattttt 20201722  T

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Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 229
Target Start/End: Original strand, 20201749 - 20201800
Alignment:
Q  178 taaaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttac 229  Q
    |||| |||| ||||||||||||||||||||||||||||||||| ||||||||    
T  20201749 taaaccaaactttgtttcttgttatcttcaaatttaaacaaaattttgttac 20201800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 164
Target Start/End: Complemental strand, 36246352 - 36246289
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgtt 164  Q
    ||||||||||||||||||||||||||||||| |||  ||||| ||||| |||||||||||||||    
T  36246352 aattactcttatctttttcaataaaactaatgaatactatctgtttggaaaactaaagtttgtt 36246289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 230
Target Start/End: Complemental strand, 43346737 - 43346621
Alignment:
Q  104 ttactcttatctttttcaataaaactaattaatgttatctatttggaaa-ctaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgttat 202  Q
    |||||||||||||||| ||||||||||| ||||| ||| ||||| |||| ||||||||| |||||   ||||   |||||     |||||||||||||||    
T  43346737 ttactcttatcttttttaataaaactaagtaatgctatatatttagaaaactaaagttttttttt---taaa---taaaa-----tttgtttcttgttat 43346649  T
Q  203 cttcaaatttaaacaaaactttgttaca 230  Q
    || ||||||||||||||| |||||||||    
T  43346648 ctacaaatttaaacaaaattttgttaca 43346621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 249607 - 249535
Alignment:
Q  104 ttactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgtttttatttaaaca 176  Q
    |||||| ||||||||| ||||||||||||||||| ||| ||||||| |||||||||||| ||||| ||||||||    
T  249607 ttactcctatcttttttaataaaactaattaatgctatatatttggaaaactaaagtttattttt-tttaaaca 249535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 152
Target Start/End: Original strand, 14967142 - 14967181
Alignment:
Q  113 tctttttcaataaaactaattaatgttatctatttggaaa 152  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  14967142 tctttttcaataaaactaattaatgttatctatttagaaa 14967181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 148
Target Start/End: Complemental strand, 36194086 - 36194043
Alignment:
Q  105 tactcttatctttttcaataaaactaattaatgttatctatttg 148  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||    
T  36194086 tactcttatctttttgaatcaaactaattaatgttatctatttg 36194043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 11992285 - 11992208
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttg--tttttatttaaaca 176  Q
    ||||||| |||||||||||| ||||| ||||||||| ||| ||||||| |||||||||||||  ||||| ||||||||    
T  11992285 aattacttttatctttttcagtaaaattaattaatgctatttatttggaaaactaaagtttgtttttttttttaaaca 11992208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 218
Target Start/End: Complemental strand, 19133462 - 19133422
Alignment:
Q  178 taaaacaaagtttgtttcttgttatcttcaaatttaaacaa 218  Q
    ||||||||| ||||||||||||| |||||||||||||||||    
T  19133462 taaaacaaaatttgtttcttgttgtcttcaaatttaaacaa 19133422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 176
Target Start/End: Complemental strand, 39585818 - 39585751
Alignment:
Q  108 tcttatctttt--tcaataaaactaattaatgttatctatttggaaactaaagtttgtttttatttaaaca 176  Q
    |||||||||||  ||||||||||||||||||| ||||||||| |||  |||||||||||||| ||||||||    
T  39585818 tcttatcttttattcaataaaactaattaatgctatctatttagaa--taaagtttgttttt-tttaaaca 39585751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 108 - 162
Target Start/End: Original strand, 39584848 - 39584903
Alignment:
Q  108 tcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttg 162  Q
    ||||||||||||| ||||||| ||||||| |||| ||||||| |||||||||||||    
T  39584848 tcttatctttttcgataaaaccaattaatcttatgtatttggaaaactaaagtttg 39584903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 220
Target Start/End: Original strand, 14655040 - 14655082
Alignment:
Q  178 taaaacaaagtttgtttcttgttatcttcaaatttaaacaaaa 220  Q
    ||||||||| |||||||||||||||||||||||| ||| ||||    
T  14655040 taaaacaaaatttgtttcttgttatcttcaaattgaaaaaaaa 14655082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 164
Target Start/End: Complemental strand, 39940362 - 39940312
Alignment:
Q  115 tttttcaataaaactaattaatgttatctatttgga-aactaaagtttgtt 164  Q
    ||||| ||||||||||||||||| |||||||||||| ||||||| ||||||    
T  39940362 ttttttaataaaactaattaatgctatctatttggataactaaattttgtt 39940312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 230
Target Start/End: Complemental strand, 249516 - 249469
Alignment:
Q  180 aaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttaca 230  Q
    ||||||| ||||||||||||||||||   |||||||||||| |||||||||    
T  249516 aaacaaaatttgtttcttgttatctt---atttaaacaaaattttgttaca 249469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 3e-35; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 102 - 255
Target Start/End: Original strand, 45646618 - 45646766
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaa-ctaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtt 200  Q
    ||||||| || ||||||||||||||||||||||||| |||||||||| ||| ||||||||||||| | |||      | |||||||||||||||| ||||    
T  45646618 aattacttttttctttttcaataaaactaattaatgctatctatttgaaaaactaaagtttgtttgttttt------ttaaacaaagtttgtttcctgtt 45646711  T
Q  201 atcttcaaatttaaacaaaactttgttacaaacaatggttccaagaagggttaaa 255  Q
    |||| ||||||||||||||| |||||| |||||||||||||||||||| ||||||    
T  45646712 atctgcaaatttaaacaaaattttgttccaaacaatggttccaagaagagttaaa 45646766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 255
Target Start/End: Complemental strand, 37031034 - 37030895
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaactaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtta 201  Q
    ||||||| ||| |||||||||||||||||||||||| |||||||||||||   | ||||| ||||||            |||||||||||||||||||||    
T  37031034 aattacttttagctttttcaataaaactaattaatgctatctatttggaac--acagttttttttta------------aacaaagtttgtttcttgtta 37030949  T
Q  202 tcttcaaatttaaacaaaactttgttacaaacaatggttccaagaagggttaaa 255  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  37030948 tcttcaaatttaaacaaaattttgttacaaacaatggttccaagaagagttaaa 37030895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 102 - 240
Target Start/End: Original strand, 5493571 - 5493704
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaa-ctaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtt 200  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||  ||| ||||| ||| ||     |||||||||||||||||| ||    
T  5493571 aattactcttatctttttcaataaaactaattaatgttgtctatttgaaaaactaattttttttttttttttaa-----aaacaaagtttgtttcttatt 5493665  T
Q  201 atcttcaaatttaaacaaaactttgttacaaacaatggtt 240  Q
    |||||||||||||||||||| ||||||| |||||||||||    
T  5493666 atcttcaaatttaaacaaaattttgtta-aaacaatggtt 5493704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 102 - 255
Target Start/End: Original strand, 2093794 - 2093948
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaa-ctaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtt 200  Q
    ||||||| |||||||||||| | ||| ||||||||| |||||||||| ||| ||||||||| ||||| |||       ||||||||||||||||||||||    
T  2093794 aattacttttatctttttcagtcaaattaattaatgctatctatttgaaaaactaaagtttttttttttttttttttaaaaacaaagtttgtttcttgtt 2093893  T
Q  201 atcttcaaatttaaacaaaactttgttacaaacaatggttccaagaagggttaaa 255  Q
    |||||||||||||||| ||| ||||||  ||| ||||||||||||||| ||||||    
T  2093894 atcttcaaatttaaactaaattttgttctaaataatggttccaagaagagttaaa 2093948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 117 - 229
Target Start/End: Original strand, 3751492 - 3751603
Alignment:
Q  117 tttcaataaaactaattaatgttatctatttggaaac-taaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgttatcttcaaatttaaa 215  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||| |  |||||   |||||||||||||||||||||||||| |||||||||    
T  3751492 tttcaataaaactaattaatgttatatatttggaaacctaaagtttgtttttct--aaacaaagaaacaaagtttgtttcttgttatctttaaatttaaa 3751589  T
Q  216 caaaactttgttac 229  Q
    ||||| ||| ||||    
T  3751590 caaaattttcttac 3751603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 102 - 229
Target Start/End: Original strand, 9588763 - 9588905
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaa-ctaaagtttgtttttatttaaacag---------------taaaacaa 185  Q
    |||||||  |||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| ||||||||                ||||||||    
T  9588763 aattactaatatctttttcaaaaaaactaattaatgttatatatttggaaaactaaagtttgttttt-tttaaacaaagtttgtttgttttataaaacaa 9588861  T
Q  186 agtttgtttcttgttatcttcaaatttaaacaaaactttgttac 229  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  9588862 agtttgtttcttgttatcttaaaatttaaacaaaactttgttac 9588905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 180 - 247
Target Start/End: Original strand, 2599148 - 2599215
Alignment:
Q  180 aaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttacaaacaatggttccaagaa 247  Q
    |||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||| ||||||    
T  2599148 aaacaaagtttgtttcttgttatctttaaatttaaacaaaattgtgttacaaacaatggtttcaagaa 2599215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 109 - 247
Target Start/End: Original strand, 20841344 - 20841472
Alignment:
Q  109 cttatctttttcaataaaactaattaatgttatctatttggaaa-ctaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgttatcttca 207  Q
    ||||| ||||||||||||||||||||||| |||||||||| ||| ||||||| | |||||            |||||||||||||||||| ||||||| |    
T  20841344 cttatttttttcaataaaactaattaatgctatctatttgaaaaactaaagtatttttttt-----------aaacaaagtttgtttcttattatcttta 20841432  T
Q  208 aatttaaacaaaactttgttacaaacaatggttccaagaa 247  Q
    ||||||||||||| | ||||||||||||||||| ||||||    
T  20841433 aatttaaacaaaattgtgttacaaacaatggtttcaagaa 20841472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 240
Target Start/End: Original strand, 34668700 - 34668830
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaa-ctaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtt 200  Q
    ||||||| || | ||||| ||||||||||||||||| |||||||||||||| ||||||| ||||||| ||         ||||||| ||||||| |||||    
T  34668700 aattacttttttttttttgaataaaactaattaatgctatctatttggaaaactaaagtatgtttttctt---------aaacaaaatttgttttttgtt 34668790  T
Q  201 atcttcaaatttaaacaaaactttgttacaaacaatggtt 240  Q
    ||||| |||||||||||||| | | |||||||||||||||    
T  34668791 atctttaaatttaaacaaaattgtcttacaaacaatggtt 34668830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 181 - 255
Target Start/End: Complemental strand, 45759921 - 45759847
Alignment:
Q  181 aacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttacaaacaatggttccaagaagggttaaa 255  Q
    ||||||||| ||||||||||||||| |||||||||||||| ||  |||| |||||||||||||||||| ||||||    
T  45759921 aacaaagttcgtttcttgttatctttaaatttaaacaaaatttcattactaacaatggttccaagaagagttaaa 45759847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 633351 - 633286
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgtttt 166  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||| ||||    
T  633351 aattactcttatcattttcaataaaactaattaatgttatatatttggaaaactaaagtttatttt 633286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 91 - 248
Target Start/End: Complemental strand, 16237666 - 16237513
Alignment:
Q  91 tacgatttgaaaattactcttatctttttcaataaaactaattaatgttatctatttggaaactaaagtttgtttttatttaaacagtaaaacaaagttt 190  Q
    |||||||||  ||||||| |||| |||||||||||| |||||||||| |||||||||||||| | || ||| |||||          | |||||||||||    
T  16237666 tacgatttgtcaattactattatatttttcaataaagctaattaatgctatctatttggaaaattaatttttttttt----------ttaaacaaagttt 16237577  T
Q  191 gtttcttgttatcttcaaatttaaacaaaactt------tgttacaaacaatggttccaagaag 248  Q
     ||| |||| ||||||||||||||| |||||||      |||||||||||||||||||||||||    
T  16237576 tttttttgtaatcttcaaatttaaataaaactttgttactgttacaaacaatggttccaagaag 16237513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 104 - 167
Target Start/End: Complemental strand, 21934548 - 21934484
Alignment:
Q  104 ttactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgttttt 167  Q
    |||||||||||||||| ||||||||||||||||| ||| ||||||| ||||||||||||||||||    
T  21934548 ttactcttatcttttttaataaaactaattaatgctatatatttggaaaactaaagtttgttttt 21934484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 113 - 229
Target Start/End: Complemental strand, 15638543 - 15638435
Alignment:
Q  113 tctttttcaataaaactaattaatgttatctatttggaaactaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgttatcttcaaattt 212  Q
    |||||||| |||||||| ||||||||| | |||||| || | |||||||||||||  |||||      ||||||||||||||||||||||||| |||||     
T  15638543 tctttttccataaaacttattaatgttttatatttgcaatcaaaagtttgttttt--ttaaa------aacaaagtttgtttcttgttatcttaaaattc 15638452  T
Q  213 aaacaaaactttgttac 229  Q
    |||||||| ||||||||    
T  15638451 aaacaaaattttgttac 15638435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 23772312 - 23772188
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgt--tatctatttg-gaaactaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttg 198  Q
    |||||||||||| |||||||||||||||||| |||||  ||| ||||||  |||||||||||| ||||| ||| |     |||||||| |||||||  ||    
T  23772312 aattactcttatatttttcaataaaactaataaatgttatatatatttgaaaaactaaagtttttttttttttta-----aaaacaaaatttgtttaatg 23772218  T
Q  199 ttatcttcaaatttaaacaaaactttgtta 228  Q
    ||||||| |||||||||||||| |||||||    
T  23772217 ttatctttaaatttaaacaaaattttgtta 23772188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 244
Target Start/End: Complemental strand, 42735606 - 42735542
Alignment:
Q  180 aaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttacaaacaatggttccaa 244  Q
    |||||||||||||| || |||||||| |||||||||||||| |||||||| ||| ||||||||||    
T  42735606 aaacaaagtttgttcctcgttatctttaaatttaaacaaaaatttgttaccaacgatggttccaa 42735542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 165
Target Start/End: Complemental strand, 45760020 - 45759956
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttg-gaaactaaagtttgttt 165  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||  ||||||| ||||||||    
T  45760020 aattactcttatctttctcaataaaactaattaatgctatctatttgaaaaactaatgtttgttt 45759956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 229
Target Start/End: Original strand, 375764 - 375885
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatg--ttatctatttggaaact-aaagtttgtttttatttaaacagtaaaacaaagtttgtttcttg 198  Q
    |||||||||||||||||| ||||||| |||||||||  |||| |||||||||| | ||| ||||||||| ||         |||||||||||||||||||    
T  375764 aattactcttatcttttttaataaaattaattaatgctttatatatttggaaaattaaattttgtttttttt---------aaacaaagtttgtttcttg 375854  T
Q  199 ttatcttcaaatttaaacaaaactttgttac 229  Q
    ||||| | |||||| ||||||| ||||||||    
T  375855 ttatcctaaaattttaacaaaattttgttac 375885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 229
Target Start/End: Complemental strand, 7259687 - 7259636
Alignment:
Q  178 taaaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttac 229  Q
    ||||||||| |||||||||| |||||||||||||||||||||| ||||||||    
T  7259687 taaaacaaaatttgtttcttattatcttcaaatttaaacaaaattttgttac 7259636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 176
Target Start/End: Original strand, 19578350 - 19578425
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctattt-ggaaactaaagtttgtttttatttaaaca 176  Q
    |||| ||||| ||||||||||||||||||||||||||||| ||||| | |||| ||||||||||||| || |||||    
T  19578350 aattgctcttgtctttttcaataaaactaattaatgttatatatttagaaaacaaaagtttgttttttttaaaaca 19578425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 176
Target Start/End: Original strand, 45667474 - 45667548
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgtttttatttaaaca 176  Q
    ||||||| | |||||||||||||||| ||||||||| ||||||||||| |||| ||||||||||||| ||||||||    
T  45667474 aattactttgatctttttcaataaaattaattaatgctatctatttggaaaacgaaagtttgttttt-tttaaaca 45667548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 175
Target Start/End: Complemental strand, 25342445 - 25342372
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgtttttatttaaac 175  Q
    ||||||| ||||| |||| ||||||||||||||||||||| ||||||| |||||||| ||||||||| |||||||    
T  25342445 aattacttttatcgtttttaataaaactaattaatgttatatatttggaaaactaaa-tttgtttttttttaaac 25342372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 25841908 - 25841858
Alignment:
Q  178 taaaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgtta 228  Q
    ||||||||| ||||||| |||||||||||||||||||| ||||||||||||    
T  25841908 taaaacaaaatttgttttttgttatcttcaaatttaaataaaactttgtta 25841858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 167
Target Start/End: Complemental strand, 25842001 - 25841935
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgttttt 167  Q
    ||||| |||||| ||||||||||||||||||||||| ||| ||||||| |||||||| |||||||||    
T  25842001 aattaatcttatatttttcaataaaactaattaatgctatatatttggaaaactaaaatttgttttt 25841935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 152
Target Start/End: Original strand, 27264131 - 27264181
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaa 152  Q
    |||||||||||||||||||||||||| ||||||||| ||||| ||||||||    
T  27264131 aattactcttatctttttcaataaaattaattaatgctatctttttggaaa 27264181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 20141077 - 20141032
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctattt 147  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||    
T  20141077 aattactcttatctttttcaataaaacaaattaatgttatgtattt 20141032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 219
Target Start/End: Complemental strand, 44940932 - 44940825
Alignment:
Q  104 ttactcttatctttttcaataaaactaattaatgttatctatttg-gaaactaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgttat 202  Q
    ||||| |||||||||| ||||||||||||||||| ||| ||||||  ||| ||||||||||||||          ||||||||| |||||||||||||||    
T  44940932 ttacttttatcttttttaataaaactaattaatgctatatatttgaaaaattaaagtttgttttt---------ttaaaacaaaatttgtttcttgttat 44940842  T
Q  203 cttcaaatttaaacaaa 219  Q
     |||| |||||||||||    
T  44940841 tttcagatttaaacaaa 44940825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 23720469 - 23720347
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctat--ttggaaa-ctaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttg 198  Q
    ||||||| |||| |||||||||||||||||| |||||||| |||  ||| ||| ||||||||| ||||| ||||||      |||||| |||||||  ||    
T  23720469 aattacttttatatttttcaataaaactaataaatgttatatatatttgaaaaactaaagttttttttt-tttaaa------aacaaaatttgtttaatg 23720377  T
Q  199 ttatcttcaaatttaaacaaaactttgtta 228  Q
    ||||||| |||||||||||||| |||||||    
T  23720376 ttatctttaaatttaaacaaaattttgtta 23720347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 23738925 - 23738803
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctat--ttggaaa-ctaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttg 198  Q
    ||||||| |||| |||||||||||||||||| |||||||| |||  ||| ||| ||||||||| ||||| ||||||      |||||| |||||||  ||    
T  23738925 aattacttttatatttttcaataaaactaataaatgttatatatatttgaaaaactaaagttttttttt-tttaaa------aacaaaatttgtttaatg 23738833  T
Q  199 ttatcttcaaatttaaacaaaactttgtta 228  Q
    ||||||| |||||||||||||| |||||||    
T  23738832 ttatctttaaatttaaacaaaattttgtta 23738803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 296544 - 296594
Alignment:
Q  178 taaaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgtta 228  Q
    ||||||||| || ||||||||||||||| |||||||||||||| |||||||    
T  296544 taaaacaaatttcgtttcttgttatcttaaaatttaaacaaaattttgtta 296594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 229
Target Start/End: Complemental strand, 6512560 - 6512510
Alignment:
Q  179 aaaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttac 229  Q
    |||| |||||||||||||||||||| ||||||||| |||||| ||||||||    
T  6512560 aaaaaaaagtttgtttcttgttatcctcaaatttatacaaaattttgttac 6512510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 152
Target Start/End: Complemental strand, 7259772 - 7259722
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaa 152  Q
    ||||| |||||| ||||||||||||||||||||||| ||| ||||||||||    
T  7259772 aattattcttatatttttcaataaaactaattaatgctatatatttggaaa 7259722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 152
Target Start/End: Complemental strand, 19234058 - 19234008
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaa 152  Q
    ||||||||||||||||||||||||||  |||||||| ||| ||||||||||    
T  19234058 aattactcttatctttttcaataaaaaaaattaatgctatatatttggaaa 19234008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 29556569 - 29556523
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttg 148  Q
    ||||||||||||||||||||||||||||||  |||||| ||||||||    
T  29556569 aattactcttatctttttcaataaaactaacaaatgttctctatttg 29556523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 230
Target Start/End: Complemental strand, 38751086 - 38751036
Alignment:
Q  180 aaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttaca 230  Q
    ||||||| ||||||||||||||||| || |||||||||||| |||||||||    
T  38751086 aaacaaaatttgtttcttgttatctacagatttaaacaaaattttgttaca 38751036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 1272444 - 1272489
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctattt 147  Q
    |||||||||||| ||||||||||||||||||||||| ||| |||||    
T  1272444 aattactcttatatttttcaataaaactaattaatgctatatattt 1272489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 229
Target Start/End: Complemental strand, 6472726 - 6472678
Alignment:
Q  181 aacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttac 229  Q
    ||||||||||||||||||||||  ||||||||| |||||| ||||||||    
T  6472726 aacaaagtttgtttcttgttattctcaaatttatacaaaattttgttac 6472678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 23702013 - 23701892
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctat--ttggaaa-ctaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttg 198  Q
    ||||||| |||| |||||||||||||||||| |||||||| |||  ||| ||| ||||||||| |||||  |||||      |||||| |||||||  ||    
T  23702013 aattacttttatatttttcaataaaactaataaatgttatatatatttgaaaaactaaagttttttttt--ttaaa------aacaaaatttgtttaatg 23701922  T
Q  199 ttatcttcaaatttaaacaaaactttgtta 228  Q
    ||||||| |||||||||||||| |||||||    
T  23701921 ttatctttaaatttaaacaaaattttgtta 23701892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 166
Target Start/End: Complemental strand, 54675247 - 54675184
Alignment:
Q  103 attactcttatctttttcaataaaactaattaatgttatctatttg-gaaactaaagtttgtttt 166  Q
    |||||||||||||||||||| ||||||||||||||||||  |||||  |||||||||||| ||||    
T  54675247 attactcttatctttttcaa-aaaactaattaatgttataaatttgaaaaactaaagtttttttt 54675184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 167
Target Start/End: Original strand, 296452 - 296519
Alignment:
Q  102 aattactcttatcttttt-caataaaactaattaatgttatctatttgg-aaactaaagtttgttttt 167  Q
    |||||||||||||||||| | |||||||||||| ||| ||| ||||||| |||||||||||| |||||    
T  296452 aattactcttatcttttttctataaaactaatttatgctatatatttggaaaactaaagtttattttt 296519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 137
Target Start/End: Original strand, 10614618 - 10614653
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatg 137  Q
    |||||||||||||||||||| |||||||||||||||    
T  10614618 aattactcttatctttttcattaaaactaattaatg 10614653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 182 - 225
Target Start/End: Original strand, 12568520 - 12568563
Alignment:
Q  182 acaaagtttgtttcttgttatcttcaaatttaaacaaaactttg 225  Q
    |||||||||||||||| ||||||| |||||||||||||| ||||    
T  12568520 acaaagtttgtttcttattatcttaaaatttaaacaaaattttg 12568563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 182 - 225
Target Start/End: Original strand, 13544984 - 13545027
Alignment:
Q  182 acaaagtttgtttcttgttatcttcaaatttaaacaaaactttg 225  Q
    |||||||||||||||| ||||||| |||||||||||||| ||||    
T  13544984 acaaagtttgtttcttattatcttaaaatttaaacaaaattttg 13545027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 148
Target Start/End: Original strand, 15772305 - 15772336
Alignment:
Q  117 tttcaataaaactaattaatgttatctatttg 148  Q
    ||||||||||||||||||||||||||||||||    
T  15772305 tttcaataaaactaattaatgttatctatttg 15772336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 103 - 165
Target Start/End: Complemental strand, 19187731 - 19187668
Alignment:
Q  103 attactcttatctttttcaataaaactaattaatgttatctatttg-gaaactaaagtttgttt 165  Q
    ||||| ||||| ||||||||||||||||||||||| ||| ||||||  ||| ||||||||||||    
T  19187731 attacacttatttttttcaataaaactaattaatgatatatatttgaaaaattaaagtttgttt 19187668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 229
Target Start/End: Complemental strand, 21959704 - 21959653
Alignment:
Q  178 taaaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttac 229  Q
    ||||||||| || |||| |||||||||||||||||||||||||  |||||||    
T  21959704 taaaacaaaattagtttattgttatcttcaaatttaaacaaaatgttgttac 21959653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 176
Target Start/End: Original strand, 27817442 - 27817508
Alignment:
Q  110 ttatctttttcaataaaactaattaatgttatctatttg-gaaactaaagtttgtttttatttaaaca 176  Q
    ||||||||||||||||||||||| |||  | ||||||||  |||||||||||||||||| ||||||||    
T  27817442 ttatctttttcaataaaactaatgaattctctctatttgaaaaactaaagtttgttttt-tttaaaca 27817508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 152
Target Start/End: Original strand, 25485838 - 25485876
Alignment:
Q  114 ctttttcaataaaactaattaatgttatctatttggaaa 152  Q
    |||||||||||||||||||| ||||||| ||||||||||    
T  25485838 ctttttcaataaaactaattgatgttatatatttggaaa 25485876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 23272072 - 23272117
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctattt 147  Q
    ||||| ||||||||||||||||||||| |||||||| ||| |||||    
T  23272072 aattattcttatctttttcaataaaacaaattaatgctatatattt 23272117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 211
Target Start/End: Complemental strand, 54675184 - 54675151
Alignment:
Q  178 taaaacaaagtttgtttcttgttatcttcaaatt 211  Q
    |||||||||||||||||||||||||||| |||||    
T  54675184 taaaacaaagtttgtttcttgttatctttaaatt 54675151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 38751151 - 38751103
Alignment:
Q  104 ttactcttatctttttcaataaaactaattaatgttatctatttggaaa 152  Q
    |||||||| ||||||| ||||||||||| ||||| ||| ||||||||||    
T  38751151 ttactcttgtcttttttaataaaactaagtaatgctatatatttggaaa 38751103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 2e-33; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 91 - 255
Target Start/End: Original strand, 16393713 - 16393870
Alignment:
Q  91 tacgatttgaaaattactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgtttttatttaaacagtaaaacaaagtt 189  Q
    |||||||||  ||||||| ||| |||||||||||||||||||||||| ||||||||||| ||||||||||||| |||| |||        ||||||||||    
T  16393713 tacgatttgtcaattacttttagctttttcaataaaactaattaatgctatctatttggaaaactaaagtttggtttttttt--------aaacaaagtt 16393804  T
Q  190 tgtttcttgttatcttcaaatttaaacaaaactttgttacaaacaatggttccaagaagggttaaa 255  Q
    | ||| ||||||||||||||||||||||||| |||||| |||||||| ||||||| ||| ||||||    
T  16393805 tattttttgttatcttcaaatttaaacaaaattttgttccaaacaatagttccaaaaagagttaaa 16393870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 102 - 244
Target Start/End: Complemental strand, 39628354 - 39628213
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtt 200  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||     | |||| |||||||||||||||||    
T  39628354 aattactcttatttttttcaataaaactaattaatgttatctatttggaaaactaaagtttgttttttttttttttg-aaaaaaaagtttgtttcttgtt 39628256  T
Q  201 atcttcaaatttaaacaaaactttgttacaaacaatggttccaa 244  Q
    |||||||||||||||| ||  ||| |||||||||||| ||||||    
T  39628255 atcttcaaatttaaac-aatttttattacaaacaatgattccaa 39628213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 102 - 244
Target Start/End: Complemental strand, 39637904 - 39637763
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtt 200  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||     | |||| |||||||||||||||||    
T  39637904 aattactcttatttttttcaataaaactaattaatgttatctatttggaaaactaaagtttgttttttttttttttg-aaaaaaaagtttgtttcttgtt 39637806  T
Q  201 atcttcaaatttaaacaaaactttgttacaaacaatggttccaa 244  Q
    |||||||||||||||| ||  ||| |||||||||||| ||||||    
T  39637805 atcttcaaatttaaac-aatttttattacaaacaatgattccaa 39637763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 102 - 247
Target Start/End: Original strand, 32233648 - 32233786
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatg-ttatctatttggaa-actaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgt 199  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||| ||         ||||||||||||||| ||||    
T  32233648 aattactcttatctttttcaataaaactaattaatgcttatctatttggaacactaaagtttttttttttt---------aaacaaagtttgtttattgt 32233738  T
Q  200 tatcttcaaatttaaacaaaactttgttacaaacaatggttccaagaa 247  Q
    |||||||||||||||| |||| |||| ||||||||||| ||| |||||    
T  32233739 tatcttcaaatttaaataaaattttgctacaaacaatgattcgaagaa 32233786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 102 - 248
Target Start/End: Original strand, 25496669 - 25496808
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttg-gaaactaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtt 200  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||  |||        || ||||||||||||||| ||    
T  25496669 aattacttttatctttttcaataaaactaattaatgctatctatttgaaaaactaaagtttgttttatttt--------aagcaaagtttgtttcttatt 25496760  T
Q  201 atcttcaaatttaaacaaaactttgttacaaacaatggttccaagaag 248  Q
    ||||| |||||||||||||| ||||||| ||||||||||| |||||||    
T  25496761 atctttaaatttaaacaaaattttgttataaacaatggtttcaagaag 25496808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 102 - 248
Target Start/End: Original strand, 25400490 - 25400628
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtt 200  Q
    ||||||| ||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||  |||        || ||||||||||||||| ||    
T  25400490 aattacttttatccttttcaataaaactaattaatgctatctatttggaaaactaaagtttgttttatttt--------aagcaaagtttgtttcttatt 25400581  T
Q  201 atcttcaaatttaaacaaaactttgttacaaacaatggttccaagaag 248  Q
    ||||| |||||||||| ||| ||||||| ||||||||||| |||||||    
T  25400582 atctttaaatttaaac-aaattttgttataaacaatggtttcaagaag 25400628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 102 - 248
Target Start/End: Original strand, 34146203 - 34146364
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgtttttatttaaaca---------------gtaaaacaa 185  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||| || |||||                ||||||||    
T  34146203 aattactcttatctttttcaataaaactaattaatgatgtctatttggaaaactaaagtttgttttt-ttaaaacaaagttttttttttttttaaaacaa 34146301  T
Q  186 agtttgtttcttgttatcttcaaatttaaacaaaactttgttacaaacaatggttccaagaag 248  Q
    ||| |||||||||||||||||||||||||||||   ||| |||||||||||| ||||||||||    
T  34146302 agtctgtttcttgttatcttcaaatttaaacaatgttttattacaaacaatgattccaagaag 34146364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 180 - 255
Target Start/End: Original strand, 38457388 - 38457463
Alignment:
Q  180 aaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttacaaacaatggttccaagaagggttaaa 255  Q
    |||||||||||  |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  38457388 aaacaaagtttaattcttgttattttcaaatttaaacaaaattttgttacaaacaatggttccaagaagagttaaa 38457463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 188 - 255
Target Start/End: Complemental strand, 7695257 - 7695190
Alignment:
Q  188 tttgtttcttgttatcttcaaatttaaacaaaactttgttacaaacaatggttccaagaagggttaaa 255  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||    
T  7695257 tttgcttcttgttatcttcaaatttaaacaaaattttgttacaaacaatggttccaaaaagagttaaa 7695190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 102 - 218
Target Start/End: Original strand, 27231793 - 27231905
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgtt-tttatttaaacagtaaaacaaagtttgtttcttgt 199  Q
    ||||| |||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||  || |||      | ||||||||||||||||||||    
T  27231793 aattattcttatttttttcaataaaactaattaatgctatctatttggaaaactaaagtttgttcgttcttt------ttaaacaaagtttgtttcttgt 27231886  T
Q  200 tatcttcaaatttaaacaa 218  Q
    |||||| ||||||||||||    
T  27231887 tatctttaaatttaaacaa 27231905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 102 - 248
Target Start/End: Complemental strand, 1256793 - 1256653
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaact-aaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtt 200  Q
    |||||||||||||||||  ||||||| |||||||||| |||||||| |||| | ||||||| ||| | |||      | ||||||||||||||||||||     
T  1256793 aattactcttatctttta-aataaaattaattaatgtcatctatttagaaaattaaagtttatttcttttt------ttaaacaaagtttgtttcttgta 1256701  T
Q  201 atcttcaaatttaaacaaaactttgttacaaacaatggttccaagaag 248  Q
    ||||||||||||||||||   ||| ||||||||||||||| |||||||    
T  1256700 atcttcaaatttaaacaatttttttttacaaacaatggtttcaagaag 1256653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 103 - 230
Target Start/End: Complemental strand, 29315934 - 29315815
Alignment:
Q  103 attactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtta 201  Q
    ||||||||||||||||| ||||||||||| ||||| ||| ||||||| |||||||||||| |||||          ||||||||| ||||||||||||||    
T  29315934 attactcttatcttttttaataaaactaagtaatgctatatatttggaaaactaaagttttttttt---------ttaaaacaaaatttgtttcttgtta 29315844  T
Q  202 tcttcaaatttaaacaaaactttgttaca 230  Q
    ||| || |||||||||||| |||||||||    
T  29315843 tctacagatttaaacaaaattttgttaca 29315815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 110 - 167
Target Start/End: Original strand, 38457299 - 38457357
Alignment:
Q  110 ttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgttttt 167  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  38457299 ttatctttttcaataaaactaattaatgctatctatttggaaaactaaagtttgttttt 38457357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 102 - 167
Target Start/End: Complemental strand, 45083091 - 45083025
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgttttt 167  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||| ||||||| ||||||||||    
T  45083091 aattactcttatctttttcaataaaactaattaatgtaatgtatttggaaaactaacgtttgttttt 45083025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 174
Target Start/End: Complemental strand, 7695359 - 7695286
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttg-gaaactaaagtttgtttttatttaaa 174  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||  |||||||| ||||||    
T  7695359 aattactcttatctttttcaataaaactagttaatgttatctatttgaaaaactaaaaattgtttttttttaaa 7695286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 11087147 - 11087270
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaactaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtta 201  Q
    |||||||||||||||| ||||||||| |||||||| || |||||||| |||  |||||||  |||| ||   |   | |||||||| ||||||||| |||    
T  11087147 aattactcttatctttctcaataaaattaattaatattgtctatttgaaaaacaaagttttattttttt---atttttaaacaaagcttgtttcttatta 11087243  T
Q  202 tcttcaaatttaaacaaaactttgtta 228  Q
    ||||||||||||||||||| |||||||    
T  11087244 tcttcaaatttaaacaaaattttgtta 11087270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 255
Target Start/End: Complemental strand, 30887853 - 30887777
Alignment:
Q  179 aaaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttacaaacaatggttccaagaagggttaaa 255  Q
    |||| ||||||||||| |||||||||| |||||||||||||| ||| || ||||||||||||| |||||| ||||||    
T  30887853 aaaataaagtttgttttttgttatctttaaatttaaacaaaattttatttcaaacaatggttctaagaagagttaaa 30887777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 16599442 - 16599368
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttg-gaaactaaagtttgtttttatttaaaca 176  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||  |||||||||||| ||||| ||||||||    
T  16599442 aattactcttatctttttcaataaaactaattaatgatatatatttgtaaaactaaagtttattttt-tttaaaca 16599368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 167
Target Start/End: Original strand, 14896649 - 14896715
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctattt-ggaaactaaagtttgttttt 167  Q
    |||||||||||||||||||||||||||||||||||||||| |||||   ||||| ||||||||||||    
T  14896649 aattactcttatctttttcaataaaactaattaatgttatatatttaaaaaacttaagtttgttttt 14896715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 246
Target Start/End: Original strand, 38401586 - 38401720
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctattt-ggaaactaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtt 200  Q
    |||||||||||||||||| ||||||| ||||||||||||| ||||| | ||| |||||||| ||||| ||         |||||||| ||||||||||||    
T  38401586 aattactcttatcttttttaataaaattaattaatgttatttatttcgaaaattaaagtttatttttttt---------aaacaaagattgtttcttgtt 38401676  T
Q  201 atcttcaaatttaaacaaaactttgttacaaacaatggttccaaga 246  Q
    ||||||||  || || |||| |||||| | ||||||||||||||||    
T  38401677 atcttcaa--tttaataaaattttgttccgaacaatggttccaaga 38401720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 180 - 229
Target Start/End: Complemental strand, 1358887 - 1358838
Alignment:
Q  180 aaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttac 229  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  1358887 aaacaaagtttgtttcttgttatcttaaaatttaaacaaaattttgttac 1358838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 5870775 - 5870835
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttg-gaaactaaagttt 161  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||  ||||||||||||    
T  5870775 aattattcttatcattttcaataaaactaattaatgttatctatttgaaaaactaaagttt 5870835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 110 - 229
Target Start/End: Original strand, 34038919 - 34039030
Alignment:
Q  110 ttatctttttcaataaaactaattaatgttatctatttggaaact-aaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgttatcttcaa 208  Q
    |||||||||||||||||| || |||||||||| |||||  ||| | ||||||||||||| ||         |||||||||||||||||||||||||| ||    
T  34038919 ttatctttttcaataaaaatagttaatgttatatatttaaaaaattaaagtttgtttttttt---------aaacaaagtttgtttcttgttatcttaaa 34039009  T
Q  209 atttaaacaaaactttgttac 229  Q
    ||||||| |||| ||||||||    
T  34039010 atttaaataaaattttgttac 34039030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 167
Target Start/End: Complemental strand, 1530659 - 1530593
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaa-ctaaagtttgttttt 167  Q
    |||||||||||| ||||||||||||||| ||||||| |||||||||| ||| ||||||||| |||||    
T  1530659 aattactcttatttttttcaataaaactgattaatgctatctatttgaaaacctaaagttttttttt 1530593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 3443701 - 3443651
Alignment:
Q  178 taaaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgtta 228  Q
    ||||||||| ||||||||||||||||||||||||||||| ||| |||||||    
T  3443701 taaaacaaaatttgtttcttgttatcttcaaatttaaaccaaattttgtta 3443651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 3741656 - 3741705
Alignment:
Q  103 attactcttatctttttcaataaaactaattaatgttatctatttggaaa 152  Q
    ||||||||||||||||| ||||||||||||||||| ||| ||||||||||    
T  3741656 attactcttatcttttttaataaaactaattaatgctatatatttggaaa 3741705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 3741745 - 3741797
Alignment:
Q  178 taaaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttaca 230  Q
    ||||||||| |||||||||||||||||||| ||||||| |||| |||||||||    
T  3741745 taaaacaaaatttgtttcttgttatcttcatatttaaagaaaattttgttaca 3741797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 144
Target Start/End: Complemental strand, 30887930 - 30887888
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatcta 144  Q
    |||||||||||||||||| |||||||||||||||||| |||||    
T  30887930 aattactcttatcttttttaataaaactaattaatgtcatcta 30887888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 229
Target Start/End: Complemental strand, 4418884 - 4418835
Alignment:
Q  180 aaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttac 229  Q
    |||| ||| ||||||||| |||||||||||||||||| ||||||||||||    
T  4418884 aaacgaagattgtttcttattatcttcaaatttaaactaaactttgttac 4418835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 167
Target Start/End: Original strand, 36682579 - 36682643
Alignment:
Q  103 attactcttatctttttcaataaaactaattaatgttatctatttg-gaaactaaagtttgttttt 167  Q
    ||||||||||||||||| ||||||||||||||||| ||| ||||||  |||||||||||| |||||    
T  36682579 attactcttatcttttttaataaaactaattaatg-tatatatttgaaaaactaaagtttattttt 36682643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 167
Target Start/End: Complemental strand, 3443788 - 3443728
Alignment:
Q  108 tcttatctttttcaataaaactaattaatgttatctatttg-gaaactaaagtttgttttt 167  Q
    |||||| ||||||||| ||||||||||||| ||| ||||||  ||||||||||||||||||    
T  3443788 tcttatttttttcaatcaaactaattaatgctatatatttgaaaaactaaagtttgttttt 3443728  T

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Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 165
Target Start/End: Original strand, 9455254 - 9455318
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttg-gaaactaaagtttgttt 165  Q
    ||||| |||||| ||||||||||||||||||||||| ||| ||||||  ||| ||||||||||||    
T  9455254 aattattcttatatttttcaataaaactaattaatgctatatatttgaaaaaataaagtttgttt 9455318  T

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Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 166
Target Start/End: Original strand, 40557232 - 40557295
Alignment:
Q  103 attactcttatctttttcaataaaactaattaatgttatctatttg-gaaactaaagtttgtttt 166  Q
    ||||||||||||||||||||| |||||||||||||||||  |||||  |||||||||||| ||||    
T  40557232 attactcttatctttttcaat-aaactaattaatgttataaatttgaaaaactaaagtttttttt 40557295  T

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Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 7578272 - 7578198
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctattt-ggaaactaaagtttgtttttatttaaaca 176  Q
    ||||| |||||| ||||||||||||||||||||||| ||| |||||   ||| |||||||||||||| ||||||||    
T  7578272 aattattcttatatttttcaataaaactaattaatgctatatatttaaaaaattaaagtttgttttt-tttaaaca 7578198  T

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Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 229
Target Start/End: Complemental strand, 16599338 - 16599287
Alignment:
Q  178 taaaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttac 229  Q
    ||||| ||||||||||||  |||||||||||||||||| |||| ||||||||    
T  16599338 taaaaaaaagtttgtttcgagttatcttcaaatttaaataaaattttgttac 16599287  T

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Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 103 - 211
Target Start/End: Complemental strand, 41411527 - 41411430
Alignment:
Q  103 attactcttatctttttcaataaaactaattaatgttatctatttg-gaaactaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtta 201  Q
    |||||||||||||||||||| |||||||||||| |||||  |||||  |||||||||||| ||||           ||||||||||||||||||||||||    
T  41411527 attactcttatctttttcaa-aaaactaattaaagttataaatttgaaaaactaaagtttttttt-----------taaaacaaagtttgtttcttgtta 41411440  T

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Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 137
Target Start/End: Complemental strand, 44666249 - 44666214
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatg 137  Q
    |||| |||||||||||||||||||||||||||||||    
T  44666249 aatttctcttatctttttcaataaaactaattaatg 44666214  T

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Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 167
Target Start/End: Complemental strand, 2742994 - 2742936
Alignment:
Q  110 ttatctttttcaataaaactaattaatgttatctatttg-gaaactaaagtttgttttt 167  Q
    |||| ||||||||||||||||||||||| ||| ||||||  ||| ||||||||||||||    
T  2742994 ttatatttttcaataaaactaattaatgctatatatttgaaaaattaaagtttgttttt 2742936  T

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Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 167
Target Start/End: Original strand, 4418590 - 4418655
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgttttt 167  Q
    |||||| || |||||||| ||||||||||||||||| ||| ||||||| ||||||||||| ||||||    
T  4418590 aattaccctcatcttttt-aataaaactaattaatgctatatatttggaaaactaaagttagttttt 4418655  T

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Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 11384711 - 11384751
Alignment:
Q  180 aaacaaagtttgtttcttgttatcttcaaatttaaacaaaa 220  Q
    ||||||||||||||| ||||||| | |||||||||||||||    
T  11384711 aaacaaagtttgttttttgttatatgcaaatttaaacaaaa 11384751  T

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Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 152
Target Start/End: Complemental strand, 34870612 - 34870576
Alignment:
Q  116 ttttcaataaaactaattaatgttatctatttggaaa 152  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  34870612 ttttcaataaacctaattaatgttatgtatttggaaa 34870576  T

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Target: scaffold0005 (Bit Score: 69; Significance: 5e-31; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 102 - 255
Target Start/End: Original strand, 256764 - 256907
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtt 200  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||           | ||| | || ||||||||||||    
T  256764 aatttctcttatctttttcaataaaactaattaatgttatctatttggaaaactaaagtttttttt-----------ttaaatataggttgtttcttgtt 256852  T
Q  201 atcttcaaatttaaacaaaactttgttacaaacaatggttccaagaagggttaaa 255  Q
    |||||||| ||||||||||| |||||||||||| |||||||||||||| ||||||    
T  256853 atcttcaattttaaacaaaattttgttacaaacgatggttccaagaagagttaaa 256907  T

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Target: scaffold0005; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 272351 - 272310
Alignment:
Q  178 taaaacaaagtttgtttcttgttatcttcaaatttaaacaaa 219  Q
    ||||||||| |||||||||| |||||||||||||||||||||    
T  272351 taaaacaaaatttgtttcttattatcttcaaatttaaacaaa 272310  T

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Target: scaffold1130 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold1130
Description:

Target: scaffold1130; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 405 - 519
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaactaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtta 201  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||| ||||||||||||||||            ||||||||| |||||||||||| |    
T  405 aattattcttataattttcaataaaactaattaatgttatatatttgaaaactaaagtttgttt------------taaaacaaaatttgtttcttgtca 492  T
Q  202 tcttcaaatttaaacaaaactttgtta 228  Q
    ||||||||||||||||||| |||||||    
T  493 tcttcaaatttaaacaaaattttgtta 519  T

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Target: scaffold0006 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 46644 - 46530
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttggaaactaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgtta 201  Q
    ||||| ||||||  |||||||||||| ||||||||| ||| |||||| ||| |||||||||||||            |||||||| |||||||||||| |    
T  46644 aattattcttataattttcaataaaattaattaatgctatatatttgaaaattaaagtttgtttt------------aaaacaaaatttgtttcttgtca 46557  T
Q  202 tcttcaaatttaaacaaaactttgtta 228  Q
    ||||||||||||||||||| |||||||    
T  46556 tcttcaaatttaaacaaaattttgtta 46530  T

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Target: scaffold1801 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1801
Description:

Target: scaffold1801; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 124 - 242
Target Start/End: Original strand, 1236 - 1346
Alignment:
Q  124 aaaactaattaatgttatctatttggaaa-ctaaagtttgtttttatttaaacagtaaaacaaagtttgtttcttgttatcttcaaatttaaacaaaact 222  Q
    |||||||||||||| ||| |||||||||| ||||||||||||||| ||         ||||||||||||||||||| |||||| |||||| ||||||  |    
T  1236 aaaactaattaatgctatttatttggaaaactaaagtttgtttttttt---------aaacaaagtttgtttcttgatatctttaaatttgaacaaattt 1326  T
Q  223 ttgttacaaacaatggttcc 242  Q
     ||||||||||||| |||||    
T  1327 gtgttacaaacaattgttcc 1346  T

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Target: scaffold1327 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1327
Description:

Target: scaffold1327; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 102 - 173
Target Start/End: Original strand, 891 - 963
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgtttttatttaa 173  Q
    ||||||| |||||||||||||| ||||||||| ||| |||||| |||| ||| |||||||||||||| |||||    
T  891 aattacttttatctttttcaatgaaactaattgatgctatctagttggaaaattaaagtttgtttttttttaa 963  T

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Target: scaffold0118 (Bit Score: 37; Significance: 0.000000000006; HSPs: 3)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 167
Target Start/End: Original strand, 14952 - 15004
Alignment:
Q  116 ttttcaataaaactaattaatgttatctatttgg-aaactaaagtttgttttt 167  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||| ||||||    
T  14952 ttttcaataaaactaattaatgttatatatttggaaaactaaagttagttttt 15004  T

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Target: scaffold0118; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 229
Target Start/End: Complemental strand, 15231 - 15182
Alignment:
Q  180 aaacaaagtttgtttcttgttatcttcaaatttaaacaaaactttgttac 229  Q
    |||| ||| ||||||||| |||||||||||||||||| ||||||||||||    
T  15231 aaacgaagattgtttcttattatcttcaaatttaaactaaactttgttac 15182  T

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Target: scaffold0118; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 137
Target Start/End: Complemental strand, 15309 - 15277
Alignment:
Q  105 tactcttatctttttcaataaaactaattaatg 137  Q
    ||||||||| |||||||||||||||||||||||    
T  15309 tactcttatttttttcaataaaactaattaatg 15277  T

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Target: scaffold0188 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 6405 - 6361
Alignment:
Q  184 aaagtttgtttcttgttatcttcaaatttaaacaaaactttgtta 228  Q
    ||||||| |||||||||||||| | |||||||||||| |||||||    
T  6405 aaagtttatttcttgttatcttaatatttaaacaaaattttgtta 6361  T

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Target: scaffold0188; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 6459 - 6399
Alignment:
Q  102 aattactcttatctttttcaataaaactaattaatgttatctatttgg-aaactaaagttt 161  Q
    |||||||  ||| ||||||||||||| |||||| |||||| ||||||| ||||||||||||    
T  6459 aattacttctatgtttttcaataaaattaattattgttatatatttggaaaactaaagttt 6399  T

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