View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7392_low_6 (Length: 353)

Name: NF7392_low_6
Description: NF7392
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7392_low_6
NF7392_low_6
[»] chr3 (38 HSPs)
chr3 (1-304)||(6499879-6500179)
chr3 (1-333)||(9992809-9993144)
chr3 (2-162)||(23758440-23758600)
chr3 (1-304)||(16390440-16390742)
chr3 (1-162)||(13382168-13382329)
chr3 (1-162)||(13392762-13392923)
chr3 (1-165)||(4744895-4745059)
chr3 (1-165)||(5511851-5512015)
chr3 (1-165)||(5546520-5546684)
chr3 (2-162)||(12248345-12248505)
chr3 (1-165)||(5626876-5627040)
chr3 (1-165)||(12295719-12295883)
chr3 (1-165)||(16477436-16477600)
chr3 (1-165)||(41684831-41684995)
chr3 (1-159)||(19779600-19779758)
chr3 (1-165)||(24661072-24661236)
chr3 (1-190)||(8775839-8776025)
chr3 (1-190)||(18485172-18485358)
chr3 (1-160)||(37867664-37867823)
chr3 (1-160)||(37876182-37876341)
chr3 (1-190)||(38195906-38196092)
chr3 (1-190)||(39373236-39373422)
chr3 (1-158)||(6219553-6219710)
chr3 (1-165)||(5875161-5875325)
chr3 (1-165)||(24392971-24393135)
chr3 (1-190)||(28323716-28323902)
chr3 (1-156)||(20682632-20682787)
chr3 (1-156)||(14466815-14466970)
chr3 (1-161)||(29470683-29470843)
chr3 (1-156)||(13122889-13123044)
chr3 (2-80)||(10635936-10636014)
chr3 (76-190)||(10654248-10654359)
chr3 (232-304)||(38195800-38195872)
chr3 (232-304)||(28323936-28324009)
chr3 (232-304)||(39373129-39373202)
chr3 (232-304)||(12248565-12248636)
chr3 (319-349)||(23758290-23758320)
chr3 (274-304)||(37876015-37876045)
[»] chr7 (24 HSPs)
chr7 (2-190)||(466557-466742)
chr7 (1-190)||(1988702-1988888)
chr7 (1-165)||(8011650-8011814)
chr7 (2-162)||(2715201-2715361)
chr7 (1-165)||(40051667-40051831)
chr7 (1-160)||(6876806-6876965)
chr7 (1-178)||(21001971-21002148)
chr7 (1-165)||(9086413-9086577)
chr7 (1-160)||(5686723-5686882)
chr7 (1-160)||(9434427-9434586)
chr7 (1-165)||(11097196-11097361)
chr7 (1-165)||(24735909-24736073)
chr7 (1-165)||(26698692-26698856)
chr7 (1-190)||(11006351-11006537)
chr7 (1-244)||(19992979-19993220)
chr7 (1-190)||(42866992-42867178)
chr7 (1-165)||(26399659-26399823)
chr7 (1-158)||(22090372-22090529)
chr7 (1-156)||(4213219-4213374)
chr7 (1-156)||(17959638-17959793)
chr7 (1-154)||(8618587-8618740)
chr7 (1-156)||(168090-168245)
chr7 (3-157)||(15887211-15887365)
chr7 (232-304)||(11006243-11006317)
[»] chr6 (26 HSPs)
chr6 (1-219)||(27373874-27374092)
chr6 (1-219)||(27464227-27464445)
chr6 (1-162)||(12856097-12856258)
chr6 (1-162)||(26865940-26866101)
chr6 (1-165)||(3662489-3662653)
chr6 (1-165)||(17983633-17983797)
chr6 (1-165)||(25788873-25789037)
chr6 (1-165)||(27342872-27343036)
chr6 (1-165)||(27403612-27403776)
chr6 (1-178)||(9122028-9122205)
chr6 (1-165)||(16931539-16931703)
chr6 (1-165)||(12726332-12726496)
chr6 (1-165)||(26026564-26026728)
chr6 (1-160)||(25590360-25590519)
chr6 (1-156)||(34816670-34816825)
chr6 (1-154)||(32971373-32971526)
chr6 (69-160)||(7669375-7669466)
chr6 (72-190)||(27385538-27385653)
chr6 (72-190)||(27475951-27476066)
chr6 (72-190)||(4632012-4632127)
chr6 (72-190)||(32310650-32310765)
chr6 (1-100)||(27385646-27385745)
chr6 (1-100)||(27476059-27476158)
chr6 (1-157)||(12359298-12359454)
chr6 (1-100)||(4632120-4632219)
chr6 (1-100)||(32310558-32310657)
[»] chr5 (35 HSPs)
chr5 (1-304)||(31447521-31447823)
chr5 (2-162)||(15994389-15994549)
chr5 (1-165)||(15768377-15768541)
chr5 (1-165)||(37731055-37731219)
chr5 (1-165)||(17616656-17616820)
chr5 (1-165)||(17728513-17728677)
chr5 (1-165)||(23371546-23371710)
chr5 (1-165)||(23706393-23706557)
chr5 (1-165)||(30228549-30228713)
chr5 (1-165)||(31358130-31358294)
chr5 (2-162)||(31843003-31843163)
chr5 (1-165)||(36583602-36583766)
chr5 (1-165)||(42052405-42052569)
chr5 (1-165)||(9345577-9345741)
chr5 (1-165)||(24589157-24589321)
chr5 (1-165)||(24817944-24818108)
chr5 (1-165)||(6985335-6985499)
chr5 (1-165)||(14039634-14039798)
chr5 (1-165)||(14448129-14448293)
chr5 (1-165)||(14559161-14559325)
chr5 (1-165)||(22685040-22685204)
chr5 (1-165)||(23305883-23306047)
chr5 (1-165)||(27469598-27469762)
chr5 (1-164)||(27043313-27043476)
chr5 (1-160)||(27604554-27604713)
chr5 (1-165)||(39491990-39492154)
chr5 (1-190)||(35225099-35225285)
chr5 (1-158)||(40400004-40400161)
chr5 (1-160)||(5291675-5291834)
chr5 (1-159)||(39361285-39361443)
chr5 (1-156)||(22156089-22156244)
chr5 (15-161)||(1110295-1110441)
chr5 (1-161)||(20796658-20796818)
chr5 (72-190)||(36697303-36697418)
chr5 (1-100)||(36697211-36697310)
[»] chr4 (18 HSPs)
chr4 (2-162)||(451752-451912)
chr4 (2-162)||(30935995-30936155)
chr4 (2-162)||(21997592-21997752)
chr4 (1-165)||(55754731-55754895)
chr4 (1-160)||(24026941-24027100)
chr4 (1-165)||(36019508-36019672)
chr4 (1-190)||(24641466-24641652)
chr4 (1-158)||(17919294-17919451)
chr4 (1-165)||(10750071-10750235)
chr4 (1-165)||(10963840-10964004)
chr4 (1-182)||(18761984-18762162)
chr4 (1-190)||(27657799-27657985)
chr4 (1-160)||(19953858-19954017)
chr4 (1-160)||(40469495-40469654)
chr4 (1-156)||(16257112-16257267)
chr4 (232-304)||(18762203-18762275)
chr4 (232-304)||(27657692-27657765)
chr4 (232-304)||(24641359-24641432)
[»] chr2 (19 HSPs)
chr2 (2-162)||(9907076-9907236)
chr2 (2-162)||(9772247-9772407)
chr2 (1-162)||(40223475-40223636)
chr2 (1-165)||(43346538-43346702)
chr2 (1-190)||(35254150-35254336)
chr2 (1-190)||(35264759-35264945)
chr2 (1-158)||(24337279-24337436)
chr2 (1-165)||(10268121-10268285)
chr2 (1-165)||(10278698-10278862)
chr2 (1-165)||(11404360-11404524)
chr2 (1-190)||(27222537-27222723)
chr2 (1-160)||(29245393-29245552)
chr2 (1-160)||(43083835-43083994)
chr2 (16-162)||(34803301-34803447)
chr2 (1-155)||(4211085-4211239)
chr2 (1-156)||(22959218-22959373)
chr2 (232-304)||(27222431-27222503)
chr2 (232-304)||(35254043-35254116)
chr2 (232-304)||(35264652-35264725)
[»] chr1 (20 HSPs)
chr1 (2-162)||(12731631-12731791)
chr1 (2-162)||(12742224-12742384)
chr1 (1-165)||(38096204-38096368)
chr1 (1-160)||(4168401-4168560)
chr1 (1-165)||(7508418-7508582)
chr1 (1-165)||(36245946-36246110)
chr1 (1-165)||(51655390-51655554)
chr1 (1-190)||(35400058-35400244)
chr1 (1-190)||(35647583-35647769)
chr1 (1-158)||(5649272-5649429)
chr1 (1-190)||(5834323-5834509)
chr1 (1-165)||(47617452-47617616)
chr1 (1-190)||(3172719-3172905)
chr1 (1-160)||(19180085-19180244)
chr1 (1-158)||(21864824-21864981)
chr1 (1-161)||(153166-153326)
chr1 (1-156)||(12622692-12622847)
chr1 (232-304)||(3172611-3172685)
chr1 (232-304)||(35400278-35400351)
chr1 (232-304)||(35647803-35647876)
[»] chr8 (21 HSPs)
chr8 (1-165)||(209102-209266)
chr8 (1-165)||(242989-243153)
chr8 (1-165)||(722725-722889)
chr8 (1-165)||(796359-796523)
chr8 (1-165)||(15766096-15766260)
chr8 (1-165)||(15790233-15790397)
chr8 (1-165)||(29077887-29078051)
chr8 (1-165)||(32087218-32087382)
chr8 (1-165)||(36294106-36294270)
chr8 (1-160)||(26112468-26112627)
chr8 (1-165)||(3358154-3358318)
chr8 (1-165)||(9342311-9342475)
chr8 (1-190)||(13687513-13687699)
chr8 (1-190)||(36079089-36079275)
chr8 (1-160)||(19129938-19130097)
chr8 (1-156)||(6152292-6152447)
chr8 (72-190)||(44482281-44482396)
chr8 (1-100)||(44482389-44482488)
chr8 (3-157)||(30324179-30324333)
chr8 (1-157)||(19226134-19226290)
chr8 (232-304)||(13687733-13687806)
[»] scaffold0105 (2 HSPs)
scaffold0105 (1-190)||(46497-46683)
scaffold0105 (232-304)||(46717-46789)
[»] scaffold0133 (1 HSPs)
scaffold0133 (1-165)||(32310-32474)
[»] scaffold0906 (2 HSPs)
scaffold0906 (1-161)||(3439-3599)
scaffold0906 (232-304)||(3666-3738)
[»] scaffold1216 (1 HSPs)
scaffold1216 (1-160)||(267-426)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-161)||(52489-52649)
[»] scaffold0454 (2 HSPs)
scaffold0454 (72-190)||(2420-2535)
scaffold0454 (1-100)||(2528-2627)
[»] scaffold0398 (2 HSPs)
scaffold0398 (3-161)||(3258-3416)
scaffold0398 (83-161)||(11593-11671)
[»] scaffold1002 (1 HSPs)
scaffold1002 (72-161)||(2863-2952)
[»] scaffold0251 (1 HSPs)
scaffold0251 (83-157)||(23758-23832)
[»] scaffold0747 (1 HSPs)
scaffold0747 (1-50)||(3567-3616)
[»] scaffold0199 (2 HSPs)
scaffold0199 (72-161)||(23803-23892)
scaffold0199 (1-100)||(23885-23984)


Alignment Details
Target: chr3 (Bit Score: 224; Significance: 1e-123; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 304
Target Start/End: Original strand, 6499879 - 6500179
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||||||    
T  6499879 tctatcaagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaaggatga 6499978  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttctaaattatcag 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  6499979 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaacacttttagcttgtttttacttgtgttctaaattatcag 6500078  T
Q  201 tagctttgcctctgtatctctatttgattaatataaatattatcattgtttctgaaaatttaagttctacagttttaactctgatgatatttattgtttt 300  Q
    ||||||| ||| |||||||  | ||| | ||||| |||||||||||||||||||||||  || ||||||||||||||||||||||||| |||||||||||    
T  6500079 tagcttttcctttgtatcttaacttg-tcaatat-aatattatcattgtttctgaaaa-atatgttctacagttttaactctgatgatgtttattgtttt 6500175  T
Q  301 taat 304  Q
    ||||    
T  6500176 taat 6500179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 333
Target Start/End: Original strand, 9992809 - 9993144
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||    
T  9992809 tctatcccgaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaagaagaatgagagaaaaggatgagctacttaagaagaaggatga 9992908  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttctaaa-ttatca 199  Q
    ||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||  |||||||| ||||||    
T  9992909 tcatatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactcttagcttgtttttactttggttctaaatttatca 9993008  T
Q  200 gtagctttgcctctgtatctctatttgattaatataaatattatcattgtttctgaaaatttaagttctacagttttaactctgatgatatttattgttt 299  Q
    ||||||||||||||||||||  ||||| | |||||||||||||||||| ||||||||||  || ||||||||||||||||||| ||||||||||||||||    
T  9993009 gtagctttgcctctgtatcttaatttg-tcaatataaatattatcattatttctgaaaa-atatgttctacagttttaactctaatgatatttattgttt 9993106  T
Q  300 ttaa----tatttgccctgatacattgtttatatgttt 333  Q
    ||||    ||||||| |||||||||||||| |||||||    
T  9993107 ttaatgattatttgctctgatacattgtttgtatgttt 9993144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 2 - 162
Target Start/End: Complemental strand, 23758600 - 23758440
Alignment:
Q  2 ctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatgat 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||    
T  23758600 ctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctacttcagaagaaggatgat 23758501  T
Q  102 cagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaac 162  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  23758500 cagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 23758440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 304
Target Start/End: Original strand, 16390440 - 16390742
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||  |||||| | |||||||||||||||||||||||||||||||||||||||    
T  16390440 tctatccagaagaagagtacatcacaagggcagccagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctacttcagaagaaggatga 16390539  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttctaaattatcag 200  Q
     || || |||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||  | || ||||||||| | || || ||||| || | ||    
T  16390540 gcaaattaagtatctcttggaacagatgtataagcaagcccaaccttagttgcacacccgacattctttgcttgttttaatttttgctctaagttgttag 16390639  T
Q  201 tagctttgcctctgtatctctatttgattaatataaatattatcattgtttctgaaaatttaagttctac-agttttaactctgatgatatttattgttt 299  Q
    ||||||||||| ||||||| ||  | ||  |||||||| |||||||||||||| |||  ||| ||| ||| || |||||||||||| ||||||  |||||    
T  16390640 tagctttgcctttgtatct-taacttatctatataaatgttatcattgtttct-aaatcttatgttttacaagctttaactctgataatatttgctgttt 16390737  T
Q  300 ttaat 304  Q
    |||||    
T  16390738 ttaat 16390742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 13382168 - 13382329
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    |||||||||| ||||||||||||||||||||||| |||||||| |||||| ||||||| | |||||| ||||||||||||||||||||||||||||||||    
T  13382168 tctatccagaggaagagtacatcacaagggctgctagaattcaggctgggtataaaagaagaatgagggaaaaggatgagctacttcagaagaaggatga 13382267  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaac 162  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  13382268 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 13382329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 13392762 - 13392923
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    |||||||||| ||||||||||||||||||||||| |||||||| |||||| ||||||| | |||||| ||||||||||||||||||||||||||||||||    
T  13392762 tctatccagaggaagagtacatcacaagggctgctagaattcaggctgggtataaaagaagaatgagggaaaaggatgagctacttcagaagaaggatga 13392861  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaac 162  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  13392862 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 13392923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 4745059 - 4744895
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||||| | |||||| ||||||||||||||||||||||||||||||||    
T  4745059 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaaggatga 4744960  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  4744959 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 4744895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 5512015 - 5511851
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||||| | |||||| ||||||||||||||||||||||||||||||||    
T  5512015 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaaggatga 5511916  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  5511915 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 5511851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 5546520 - 5546684
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||||| | |||||| ||||||||||||||||||||||||||||||||    
T  5546520 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaaggatga 5546619  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  5546620 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 5546684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 12248345 - 12248505
Alignment:
Q  2 ctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatgat 101  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||    
T  12248345 ctatccagaagaagaatacatcacaagggctgctagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctacttcagaagaaggatgat 12248444  T
Q  102 cagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaac 162  Q
    ||||||||| |||| || |||||||||| ||||||||||||||||||||||||||||||||    
T  12248445 cagatcaagcatctcttagaacagttgtttaagcaagcccaaccttagttgcacacccaac 12248505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 5626876 - 5627040
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||| | | |||||| ||||||||||||||||||||||||||||||||    
T  5626876 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatgagggaaaaggatgagctacttcagaagaaggatga 5626975  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  5626976 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 5627040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 12295719 - 12295883
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||| | | |||||| ||||||||||||||||||||||||||||||||    
T  12295719 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatgagggaaaaggatgagctacttcagaagaaggatga 12295818  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  12295819 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 12295883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 16477600 - 16477436
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||| | | |||||| ||||||||||||||||||||||||||||||||    
T  16477600 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatgagggaaaaggatgagctacttcagaagaaggatga 16477501  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  16477500 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 16477436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 41684995 - 41684831
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||| | | |||||| ||||||||||||||||||||||||||||||||    
T  41684995 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatgagggaaaaggatgagctacttcagaagaaggatga 41684896  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  41684895 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 41684831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 19779758 - 19779600
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||| |||||||||||||    
T  19779758 tctatccagaagaagagtacatcataagggctgcaagaattcatgctgggtataaaagaagaatgagagaaaaggatgagctacttaagaagaaggatga 19779659  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacaccc 159  Q
     || || |||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  19779658 gcaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacaccc 19779600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 24661236 - 24661072
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||   |||| | | |||||| ||||||||||||||||||||||||||||||||    
T  24661236 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctacttcagaagaaggatga 24661137  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  24661136 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 24661072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 8776025 - 8775839
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||| ||||||||||| |||||||| ||||||||||||||||||||||||  ||| | |||||| |||||||||||||||||| ||||||| |||||    
T  8776025 tctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctacttaagaagaaagatga 8775926  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttct 190  Q
     |||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||    
T  8775925 acagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc---tagcttgtttttacttttgttct 8775839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 18485358 - 18485172
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||| ||||||||||| |||||||| ||||||||||||||||||||||||  ||| | |||||| |||||||||||||||||| ||||||| |||||    
T  18485358 tctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctacttaagaagaaagatga 18485259  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttct 190  Q
     |||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||    
T  18485258 acagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc---tagcttgtttttacttttgttct 18485172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 37867823 - 37867664
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| | ||||||||||||||||||||||||| |||||||||||||    
T  37867823 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctacttaagaagaaggatga 37867724  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacaccca 160  Q
     || || ||||||||||||||| || |||| |||||||||||||||||||||||||||||    
T  37867723 gcaaattaagtatcttttggaatagatgtacaagcaagcccaaccttagttgcacaccca 37867664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 37876341 - 37876182
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| | ||||||||||||||||||||||||| |||||||||||||    
T  37876341 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctacttaagaagaaggatga 37876242  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacaccca 160  Q
     || || ||||||||||||||| || |||| |||||||||||||||||||||||||||||    
T  37876241 gcaaattaagtatcttttggaatagatgtacaagcaagcccaaccttagttgcacaccca 37876182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 38196092 - 38195906
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||| ||||||||||| |||||||| ||||||||||||||||||||||||  ||| | |||||| |||||||||||||||||| ||||||| |||||    
T  38196092 tctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctacttaagaagaaagatga 38195993  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttct 190  Q
     |||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||    
T  38195992 acagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc---tagcttgtttttacttttgttct 38195906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 39373422 - 39373236
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||| ||||||||||| |||||||| ||||||||||||||||||||||||  ||| | |||||| |||||||||||||||||| ||||||| |||||    
T  39373422 tctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctacttaagaagaaagatga 39373323  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttct 190  Q
     |||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||    
T  39373322 acagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc---tagcttgtttttacttttgttct 39373236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 6219553 - 6219710
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||| || ||||||||||    
T  6219553 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaatgagagaaaaggatgagctacttaagcagaaggatga 6219652  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacc 158  Q
     || || |||||||| ||||||||| |||| |||||||||||||||||||||||||||    
T  6219653 acaaattaagtatctcttggaacagatgtacaagcaagcccaaccttagttgcacacc 6219710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 5875161 - 5875325
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||   ||||   | |||||| ||||||||||||||||||||||||||||||||    
T  5875161 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacaaagaatgagggaaaaggatgagctacttcagaagaaggatga 5875260  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  5875261 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 5875325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 24392971 - 24393135
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||| ||||||||||||||||||| |||||||| |||||||| |||||   |||| | | |||||| ||||||||||||||||||||||||||||||||    
T  24392971 tctattcagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctacttcagaagaaggatga 24393070  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  24393071 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 24393135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 28323716 - 28323902
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||| ||||||||||| ||| |||| ||||||||||||||||||||||||  ||| | |||||| |||||||||||||||||| ||||||| |||||    
T  28323716 tctatcctgaagaagagtatatctcaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctacttaagaagaaagatga 28323815  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttct 190  Q
     |||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||    
T  28323816 acagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc---tagcttgtttttacttttgttct 28323902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 20682632 - 20682787
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||| |||||||||||||||||||||||||  ||||||||||||||||| ||||||| | |||||| |||||||||||||||||  |||||||||||||    
T  20682632 tctatacagaagaagagtacatcacaagggcatcaagaattcatgctgggtataaaagaagaatgagggaaaaggatgagctactcaagaagaaggatga 20682731  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcaca 156  Q
     || ||||||||||| ||||||||| |||| |||||| ||||||||||||||||||    
T  20682732 gcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 20682787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 14466970 - 14466815
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||| |||||||  ||||||||||||||||| | ||||| | | |||| |||||||||||||||||  | |||||||||||    
T  14466970 tctatccagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaagaagattgagggaaaaggatgagctactcaaaaagaaggatga 14466871  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcaca 156  Q
     || ||||||||||| ||||||||| |||| |||||| ||||||||||||||||||    
T  14466870 gcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 14466815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 29470683 - 29470843
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||| ||| ||||  ||||| |||| |||||||||||||||   ||||| | | |||||| ||||||||| | ||||||||||||||||||    
T  29470683 tctatccagaagatgaggacatttcaaggactgctagaattcatgctgggttgaaaagtagactgagagcaaaggatgaacaacttcagaagaaggatga 29470782  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaa 161  Q
     || || |||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  29470783 gcaaattaagtatctattggaacagttgtataagcaagccaaaccttagttgcacacccaa 29470843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 13123044 - 13122889
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||| |||||||  ||||||||||| ||||| | ||||| | | |||| |||||||||||||||||  | |||||||||||    
T  13123044 tctatccagaagaagagtacatctcaagggcaacaagaattcattctgggtacaaaagaagattgagggaaaaggatgagctactcaaaaagaaggatga 13122945  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcaca 156  Q
     || ||||||||||| ||||||||| |||| |||||| ||||||||||||||||||    
T  13122944 gcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 13122889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 10635936 - 10636014
Alignment:
Q  2 ctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgag 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10635936 ctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgag 10636014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 10654248 - 10654359
Alignment:
Q  76 atgagctacttcagaagaaggatgatcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgt 175  Q
    ||||||||||||||||||| |||||||| ||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||   ||||||||    
T  10654248 atgagctacttcagaagaaagatgatcaaatcaagtatctcttagaatagttgtataagcaagcccaaccttagttgcacacccaactc---tagcttgt 10654344  T
Q  176 ttttacttgtgttct 190  Q
    |||||||| ||||||    
T  10654345 ttttacttttgttct 10654359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 304
Target Start/End: Complemental strand, 38195872 - 38195800
Alignment:
Q  232 tataaatattatcattgtttctgaaaatttaagttctacagttttaactctgatgatatttattgtttttaat 304  Q
    ||||||||||||||||||||||||||  ||| ||||||   |||||||||| ||||||||||||| |||||||    
T  38195872 tataaatattatcattgtttctgaaatattatgttctatttttttaactctaatgatatttattgattttaat 38195800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 304
Target Start/End: Original strand, 28323936 - 28324009
Alignment:
Q  232 tataaatattatcattgtttctgaaaatttaagttcta-cagttttaactctgatgatatttattgtttttaat 304  Q
    ||||||||||||||||||||||||||  ||| ||||||    |||||||||| ||||||||||||| |||||||    
T  28323936 tataaatattatcattgtttctgaaatattatgttctattttttttaactctaatgatatttattgattttaat 28324009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 304
Target Start/End: Complemental strand, 39373202 - 39373129
Alignment:
Q  232 tataaatattatcattgtttctgaaaatttaagttcta-cagttttaactctgatgatatttattgtttttaat 304  Q
    ||||||||||||||||||||||||||  ||| ||||||    |||||||||| ||||||||||||| |||||||    
T  39373202 tataaatattatcattgtttctgaaatattatgttctattttttttaactctaatgatatttattgattttaat 39373129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 304
Target Start/End: Original strand, 12248565 - 12248636
Alignment:
Q  232 tataaatattatcattgtttctgaaaatttaagttctacagttttaactctgatgatatttattgtttttaat 304  Q
    |||||||||||||||||||| | |||   || |||||| | |||||| |||||||||||||||||||||||||    
T  12248565 tataaatattatcattgttttt-aaatcatatgttctatacttttaattctgatgatatttattgtttttaat 12248636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 349
Target Start/End: Complemental strand, 23758320 - 23758290
Alignment:
Q  319 attgtttatatgtttatatgctctgctactc 349  Q
    |||||||||||||||||||||||||||||||    
T  23758320 attgtttatatgtttatatgctctgctactc 23758290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 304
Target Start/End: Complemental strand, 37876045 - 37876015
Alignment:
Q  274 tttaactctgatgatatttattgtttttaat 304  Q
    |||||||||||||||||||||||||||||||    
T  37876045 tttaactctgatgatatttattgtttttaat 37876015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 147; Significance: 2e-77; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 2 - 190
Target Start/End: Original strand, 466557 - 466742
Alignment:
Q  2 ctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatgat 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||| ||||||    
T  466557 ctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctacttcagaagaaagatgat 466656  T
Q  102 cagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttct 190  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||    
T  466657 cagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc---tagcttgtttttacttttgttct 466742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 1988888 - 1988702
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||||| | |||||||||||||||||||||||||||||||||||||||    
T  1988888 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagagaaaaggatgagctacttcagaagaaggatga 1988789  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttct 190  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||    
T  1988788 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc---tagcttgtttttacttttgttct 1988702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 8011650 - 8011814
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||||| | |||||||||||||||||||||||||||||||||||||||    
T  8011650 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagagaaaaggatgagctacttcagaagaaggatga 8011749  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  8011750 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 8011814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 2715201 - 2715361
Alignment:
Q  2 ctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatgat 101  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||| | |||||| |||||||||||||||||||| ||||||||||||    
T  2715201 ctatccagaagaagagtacatcacaagggctgctagaattcaggctgggtataaaagaagaatgagggaaaaggatgagctacttcaaaagaaggatgat 2715300  T
Q  102 cagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaac 162  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  2715301 cagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 2715361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 40051667 - 40051831
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||||| | |||||| ||||||||||||||||||||||||||||||||    
T  40051667 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaataatgagggaaaaggatgagctacttcagaagaaggatga 40051766  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  40051767 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 40051831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 6876806 - 6876965
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||| |||||||||||||    
T  6876806 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaatgagagaaaaggatgagctacttaagaagaaggatga 6876905  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacaccca 160  Q
     || || |||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  6876906 gcaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacaccca 6876965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 21001971 - 21002148
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| | ||||||||||||||||||||||||| |||||||||||||    
T  21001971 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctacttaagaagaaggatga 21002070  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttt 178  Q
     || || |||||||| ||||||||| ||||||||||||||||||||||||||||||||||| | | || |||||||||    
T  21002071 gcaaattaagtatctcttggaacagatgtataagcaagcccaaccttagttgcacacccaattttctttgcttgtttt 21002148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 9086577 - 9086413
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||| | | |||||| ||||||||||||||||||||||||||||||||    
T  9086577 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatgagggaaaaggatgagctacttcagaagaaggatga 9086478  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  9086477 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 9086413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 5686882 - 5686723
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| | ||||||||||||||||||||||||| |||||||||||||    
T  5686882 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctacttaagaagaaggatga 5686783  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacaccca 160  Q
     || || |||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  5686782 gcaaattaagtatctcttggaacagatgtataagcaagcccaaccttagttgcacaccca 5686723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 9434586 - 9434427
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| | ||||||||||||||||||||||||| |||||||||||||    
T  9434586 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctacttaagaagaaggatga 9434487  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacaccca 160  Q
     || || |||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  9434486 gcaaattaagtatctcttggaacagatgtataagcaagcccaaccttagttgcacaccca 9434427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 11097361 - 11097196
Alignment:
Q  1 tctatccagaagaagagtacatcacaag-ggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatg 99  Q
    ||||||||||||||||||||||||| || |||||| |||||||| |||||  ||||||| | |||||| |||||||||||||||||||||||||||||||    
T  11097361 tctatccagaagaagagtacatcactagtggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaaggatg 11097262  T
Q  100 atcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  11097261 atcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 11097196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 24736073 - 24735909
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||   |||| | | |||||| ||||||||||||||||||||||||||||||||    
T  24736073 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctacttcagaagaaggatga 24735974  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  24735973 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 24735909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 26698692 - 26698856
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||||| | |||||| ||||||||||||||||||||||||||||||||    
T  26698692 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaaggatga 26698791  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||||||||||||| ||||||||    
T  26698792 tcagatcaagtatctcttagaatagttgtataagcaagcccaaccttagttgcacatccaactct 26698856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 11006537 - 11006351
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||| ||||||||||| |||||||| ||||||||||||||||||||||||  ||| | |||||| |||||||||||||||||| ||||||| |||||    
T  11006537 tctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctacttaagaagaaagatga 11006438  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttct 190  Q
     |||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||    
T  11006437 acagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc---tagcttgtttttacttttgttct 11006351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 19992979 - 19993220
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||    ||||| | ||||||||||||||||||| ||||| |||||||||||||    
T  19992979 tctatccagaagaagagtacatcacaagggctgctagaattcatgctggattcaaaagaagaatgagagaaaaggatgagttacttaagaagaaggatga 19993078  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttctaaattatcag 200  Q
     || || |||||||| ||||||||| |||||||||||||||||||||||||||||||||||| || || ||||| ||| | || |||||||| || | ||    
T  19993079 gcaaattaagtatctcttggaacagatgtataagcaagcccaaccttagttgcacacccaacactctttgcttg-tttaatttttgttctaagttgttag 19993177  T
Q  201 tagctttgcctctgtatctctatttgattaatataaatattatc 244  Q
    ||||||||||| ||||||| ||| | ||  ||||||||||||||    
T  19993178 tagctttgcctttgtatct-tatcttatctatataaatattatc 19993220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 42867178 - 42866992
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||| ||||||||||| |||||||| ||||||||||||||||||||||||  ||| | |||||| |||||||||||||||||| ||||||| |||||    
T  42867178 tctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctacttaagaagaaagatga 42867079  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttct 190  Q
     |||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||    
T  42867078 acagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc---tagcttgtttttacttttgttct 42866992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 26399659 - 26399823
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||   |||| | | |||||| ||||||||||||||||||||||||||||||||    
T  26399659 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctacttcagaagaaggatga 26399758  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||    
T  26399759 tcagatcaagtatctcttagaactgttgtataagcaagcccaaccttagttgcacacccaactct 26399823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 22090529 - 22090372
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    |||||||||||||||||||||||||||||||  | ||||||||||||||| ||||||| | |||||| |||||||||||||||||  | |||||||||||    
T  22090529 tctatccagaagaagagtacatcacaagggcaaccagaattcatgctgggtataaaagaagaatgagggaaaaggatgagctactcaaaaagaaggatga 22090430  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacc 158  Q
     || ||||||||||| ||||||||| |||| |||||| ||||||||||||||||||||    
T  22090429 gcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcacacc 22090372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 4213374 - 4213219
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||||| ||||||| | |||||| ||||| |||||||||||  |||||||||||||    
T  4213374 tctatccagaagaagagtacattacaagggcatcaagaattcatgctgggtataaaagaagaatgagggaaaatgatgagctactcaagaagaaggatga 4213275  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcaca 156  Q
      | ||||||||||| ||||||||| |||| |||||| ||||||||||||||||||    
T  4213274 gaaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 4213219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 17959638 - 17959793
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||| |||||||  ||||||||||||||||| | ||||| | |||||| |||||||||||||||||  | |||||||||||    
T  17959638 tctatccagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaagaagaatgagggaaaaggatgagctactcaaaaagaaggatga 17959737  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcaca 156  Q
     || ||||||||||| ||||||||| |||| |||||| ||||||||||||||||||    
T  17959738 gcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 17959793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 8618740 - 8618587
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||| |||||||  ||||||||||||||||| | ||||  | |||||| |||||||||||||||||  | |||||||||||    
T  8618740 tctatccagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaataagaatgagggaaaaggatgagctactcaaaaagaaggatga 8618641  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgca 154  Q
     || ||||||||||| ||||||||| |||| |||||| ||||||||||||||||    
T  8618640 gcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgca 8618587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 168245 - 168090
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||| |||||||  ||||||||||||||||| | ||||| | | |||| ||||| |||||||||||  | |||||||||||    
T  168245 tctatccagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaagaagattgagggaaaaagatgagctactcaaaaagaaggatga 168146  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcaca 156  Q
     || ||||||||||| ||||||||| |||| |||||| ||||||||||||||||||    
T  168145 gcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 168090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 157
Target Start/End: Original strand, 15887211 - 15887365
Alignment:
Q  3 tatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatgatc 102  Q
    ||||||||||| || ||||   |||||||||  |||||||| |||||||  ||||| | | |||||| | || | || | |||||||||||| ||||| |    
T  15887211 tatccagaagatgattacacttcaagggctgatagaattcaagctgggctgaaaagaagactgagagcacagaaagaacaacttcagaagaatgatgagc 15887310  T
Q  103 agatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacac 157  Q
    || | || ||||| ||||||||| ||| ||||| |||| ||||||||||||||||    
T  15887311 aggttaaatatctattggaacagatgtctaagctagccaaaccttagttgcacac 15887365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 304
Target Start/End: Complemental strand, 11006317 - 11006243
Alignment:
Q  232 tataaatattatcattgtttctgaaaatttaagttcta--cagttttaactctgatgatatttattgtttttaat 304  Q
    ||||||||||||||||||||||||||  ||| ||||||     |||||||||| ||||||||||||| |||||||    
T  11006317 tataaatattatcattgtttctgaaatattatgttctatttttttttaactctaatgatatttattgattttaat 11006243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 139; Significance: 1e-72; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 27374092 - 27373874
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||    
T  27374092 tctatctagaagaagagtatatcacaagggctgcaagaattcatgctgggtataaaagaagaatgagagaaaaggatgagctacttcagaagaaggatga 27373993  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttctaaattatcag 200  Q
    ||| || ||||| |||||||||||| |||||||||||||||||||||||||||||||||||| || || ||||||||| | || |||||||| || | ||    
T  27373992 tcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaacactctttgcttgttttaatttttgttctaagttgttag 27373893  T
Q  201 tagctttgcctctgtatct 219  Q
    ||| ||||||| |||||||    
T  27373892 tagttttgcctttgtatct 27373874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 27464445 - 27464227
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||    
T  27464445 tctatctagaagaagagtatatcacaagggctgcaagaattcatgctgggtataaaagaagaatgagagaaaaggatgagctacttcagaagaaggatga 27464346  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttctaaattatcag 200  Q
    ||| || ||||| |||||||||||| |||||||||||||||||||||||||||||||||||| || || ||||||||| | || |||||||| || | ||    
T  27464345 tcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaacactctttgcttgttttaatttttgttctaagttgttag 27464246  T
Q  201 tagctttgcctctgtatct 219  Q
    ||| ||||||| |||||||    
T  27464245 tagttttgcctttgtatct 27464227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 12856258 - 12856097
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||| | |||||| ||||||||||||||||||||||||||||||||    
T  12856258 tctatccagaagaagagtacatcacaagggctgctagaattcaggctgggtataaaagaagaatgagggaaaaggatgagctacttcagaagaaggatga 12856159  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaac 162  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  12856158 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 12856097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 26866101 - 26865940
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||  ||||||| | |||||| ||||||||||||||||||||||||||||||||    
T  26866101 tctatccagaagaagagtacatcacaagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaaggatga 26866002  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaac 162  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  26866001 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 26865940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 3662653 - 3662489
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||||| | |||||| ||||||||||||||||||||||||||||||||    
T  3662653 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaaggatga 3662554  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  3662553 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 3662489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 17983633 - 17983797
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||||| | |||||| ||||||||||||||||||||||||||||||||    
T  17983633 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaaggatga 17983732  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  17983733 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 17983797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 25789037 - 25788873
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||||| | |||||| ||||||||||||||||||||||||||||||||    
T  25789037 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaaggatga 25788938  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  25788937 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 25788873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 27343036 - 27342872
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||||| | |||||| ||||||||||||||||||||||||||||||||    
T  27343036 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaaggatga 27342937  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  27342936 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 27342872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 27403776 - 27403612
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||||| | |||||| ||||||||||||||||||||||||||||||||    
T  27403776 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaaggatga 27403677  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  27403676 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 27403612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 9122028 - 9122205
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| | ||||||||||||||||||||||||| |||||||||||||    
T  9122028 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctacttaagaagaaggatga 9122127  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttt 178  Q
     || || |||||||| ||||||||| ||||||||||||||||||||||||||||||||||| | | || |||||||||    
T  9122128 gcaaattaagtatctcttggaacagatgtataagcaagcccaaccttagttgcacacccaattttctttgcttgtttt 9122205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 16931703 - 16931539
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||| | | |||||| ||||||||||||||||||||||||||||||||    
T  16931703 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatgagggaaaaggatgagctacttcagaagaaggatga 16931604  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||    
T  16931603 tcagatcaagtatctcttagaacagtngtataagcaagcccaaccttagttgcacacccaactct 16931539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 12726332 - 12726496
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||   |||| | | |||||| ||||||||||||||||||||||||||||||||    
T  12726332 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctacttcagaagaaggatga 12726431  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  12726432 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 12726496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 26026728 - 26026564
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||   |||| | | |||||| ||||||||||||||||||||||||||||||||    
T  26026728 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctacttcagaagaaggatga 26026629  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  26026628 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 26026564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 25590519 - 25590360
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||  |||||| |  |||||||| |||||||| || ||| |||||||||||||    
T  25590519 tctatccagaagaagagtacatcacaagggctgcaagaatacatgctgggtttaaaagaaggatgagagagaaggatgaacttcttaagaagaaggatga 25590420  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacaccca 160  Q
     || || ||||| || || |||||| ||||||||||||||||||||||||||||||||||    
T  25590419 gcaaattaagtacctcttagaacagatgtataagcaagcccaaccttagttgcacaccca 25590360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 34816670 - 34816825
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||| |||||||  ||||||||||||||||| | ||||| | | |||| ||||| |||||||||||  | |||||||||||    
T  34816670 tctatccagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaagaagattgagggaaaaagatgagctactcaaaaagaaggatga 34816769  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcaca 156  Q
     || ||||||||||| ||||||||| |||| |||||| ||||||||||||||||||    
T  34816770 gcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 34816825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 32971373 - 32971526
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||| |||||||  ||||||||||||||||| | ||||| | | |||| ||||| |||||||||||  | |||||||||||    
T  32971373 tctatccagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaagaagattgagggaaaatgatgagctactcaaaaagaaggatga 32971472  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgca 154  Q
     || ||||||||||| ||||||||| |||| |||||| ||||||||||||||||    
T  32971473 gcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgca 32971526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 69 - 160
Target Start/End: Original strand, 7669375 - 7669466
Alignment:
Q  69 gaaaaggatgagctacttcagaagaaggatgatcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacaccca 160  Q
    |||||||||||||||||  ||||||||||||| || ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  7669375 gaaaaggatgagctactcaagaagaaggatgagcaaatcaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacaccca 7669466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 72 - 190
Target Start/End: Complemental strand, 27385653 - 27385538
Alignment:
Q  72 aaggatgagctacttcagaagaaggatgatcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagc 171  Q
    ||||||||||||||||||||||||||||| ||||| |    ||| || ||||||||| | |||||||||||||||||||||||||||||||||   ||||    
T  27385653 aaggatgagctacttcagaagaaggatgaacagattagacttctcttagaacagttgaagaagcaagcccaaccttagttgcacacccaactc---tagc 27385557  T
Q  172 ttgtttttacttgtgttct 190  Q
    |||||||||||| ||||||    
T  27385556 ttgtttttacttttgttct 27385538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 72 - 190
Target Start/End: Complemental strand, 27476066 - 27475951
Alignment:
Q  72 aaggatgagctacttcagaagaaggatgatcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagc 171  Q
    ||||||||||||||||||||||||||||| ||||| |    ||| || ||||||||| | |||||||||||||||||||||||||||||||||   ||||    
T  27476066 aaggatgagctacttcagaagaaggatgaacagattagacttctcttagaacagttgaagaagcaagcccaaccttagttgcacacccaactc---tagc 27475970  T
Q  172 ttgtttttacttgtgttct 190  Q
    |||||||||||| ||||||    
T  27475969 ttgtttttacttttgttct 27475951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 72 - 190
Target Start/End: Complemental strand, 4632127 - 4632012
Alignment:
Q  72 aaggatgagctacttcagaagaaggatgatcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagc 171  Q
    ||||||||||||||||||||||||||||| ||||| |    ||| || ||||||||| | |||||||||||||||||||||||||||||||||   ||||    
T  4632127 aaggatgagctacttcagaagaaggatgaacagattagacttctcttagaacagttgaagaagcaagcccaaccttagttgcacacccaactc---tagc 4632031  T
Q  172 ttgtttttacttgtgttct 190  Q
    ||||| |||||| ||||||    
T  4632030 ttgttcttacttttgttct 4632012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 72 - 190
Target Start/End: Original strand, 32310650 - 32310765
Alignment:
Q  72 aaggatgagctacttcagaagaaggatgatcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagc 171  Q
    ||||||||||||||||||||||||||||| ||||| |    ||| || ||||||||| | |||||||||||||||||||||||||||||||||   ||||    
T  32310650 aaggatgagctacttcagaagaaggatgaacagattagacttctcttagaacagttgaagaagcaagcccaaccttagttgcacacccaactc---tagc 32310746  T
Q  172 ttgtttttacttgtgttct 190  Q
    ||||| |||||| ||||||    
T  32310747 ttgttcttacttttgttct 32310765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 27385745 - 27385646
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    |||||||||| | ||| ||||||||||| |||||||||||||||||||||||||| |||||  | ||||| ||||| || ||||||||||||||||||||    
T  27385745 tctatccagaggcagaatacatcacaagagctgcaagaattcatgctgggcataagaggaagttaagagagaaggaagaactacttcagaagaaggatga 27385646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 27476158 - 27476059
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    |||||||||| | ||| ||||||||||| |||||||||||||||||||||||||| |||||  | ||||| ||||| || ||||||||||||||||||||    
T  27476158 tctatccagaggcagaatacatcacaagagctgcaagaattcatgctgggcataagaggaagttaagagagaaggaagaactacttcagaagaaggatga 27476059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 12359454 - 12359298
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||| || ||||   |||||||||  |||||||| || ||||  ||||| | | |||||| |||| ||||   ||||||||||||||||||    
T  12359454 tctatccagaagatgattacacttcaagggctgatagaattcaagcagggctgaaaagcagattgagagcaaagaatgaagaacttcagaagaaggatga 12359355  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacac 157  Q
    |||||| || ||||| ||||||||| ||| ||||| |||| ||||||||||||||||    
T  12359354 tcagattaaatatctattggaacagatgtctaagctagccaaaccttagttgcacac 12359298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 4632219 - 4632120
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    |||||||||| | ||| ||||||||||| |||||||||||| ||||||||||||| |||||  | ||||| ||||| || ||||||||||||||||||||    
T  4632219 tctatccagaggcagaatacatcacaagagctgcaagaatttatgctgggcataagaggaagttaagagagaaggaagaactacttcagaagaaggatga 4632120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 32310558 - 32310657
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    |||||||||| | ||| ||||||||||| |||||||||||| ||||||||||||| |||||  | ||||| ||||| || ||||||||||||||||||||    
T  32310558 tctatccagaggcagaatacatcacaagagctgcaagaatttatgctgggcataagaggaagttaagagagaaggaagaactacttcagaagaaggatga 32310657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 137; Significance: 2e-71; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 304
Target Start/End: Original strand, 31447521 - 31447823
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||  |||||| | |||||||||||||||||||||||||||||||||||||||    
T  31447521 tctatccagaagaagagtacattacaagggctgctagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctacttcagaagaaggatga 31447620  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttctaaattatcag 200  Q
     || || |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||  | || ||||||||| | || |||||||| || | ||    
T  31447621 gcaaattaagtatattttggaacagatgtataagcaagcccaaccttagttgcacacccaacattctttgcttgttttaatttttgttctaagttgttag 31447720  T
Q  201 tagctttgcctctgtatctctatttgattaatataaatattatcattgtttctgaaaatttaagttctac-agttttaactctgatgatatttattgttt 299  Q
    ||||||||||| ||||||| ||  | ||  |||||||| |||||||||| |||| ||  ||| ||| ||| || |||||||||||| |||||| ||||||    
T  31447721 tagctttgcctttgtatct-taacttatctatataaatgttatcattgtctctg-aatcttatgttttacaagctttaactctgataatatttgttgttt 31447818  T
Q  300 ttaat 304  Q
    |||||    
T  31447819 ttaat 31447823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 2 - 162
Target Start/End: Complemental strand, 15994549 - 15994389
Alignment:
Q  2 ctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatgat 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||||| |||||||||||||||||||| ||||||    
T  15994549 ctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaatgatgagctacttcagaagaaagatgat 15994450  T
Q  102 cagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaac 162  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  15994449 cagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 15994389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 15768377 - 15768541
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||||| | |||||||||||||||||||||||||||||||||||||||    
T  15768377 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagagaaaaggatgagctacttcagaagaaggatga 15768476  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  15768477 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 15768541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 37731219 - 37731055
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||||| | |||||||||||||||||||||||||||||||||||||||    
T  37731219 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagagaaaaggatgagctacttcagaagaaggatga 37731120  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  37731119 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 37731055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 17616656 - 17616820
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||  | ||||| | |||||||||||||||||||||||||||||||||||||||    
T  17616656 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatacaaaagaagaatgagagaaaaggatgagctacttcagaagaaggatga 17616755  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  17616756 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 17616820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 17728513 - 17728677
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||  | ||||| | |||||||||||||||||||||||||||||||||||||||    
T  17728513 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatacaaaagaagaatgagagaaaaggatgagctacttcagaagaaggatga 17728612  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  17728613 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 17728677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 23371546 - 23371710
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||||| | |||||| ||||||||||||||||||||||||||||||||    
T  23371546 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaaggatga 23371645  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  23371646 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 23371710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 23706393 - 23706557
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||||| | |||||| ||||||||||||||||||||||||||||||||    
T  23706393 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaaggatga 23706492  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  23706493 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 23706557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 30228713 - 30228549
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||||| | |||||| ||||||||||||||||||||||||||||||||    
T  30228713 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaaggatga 30228614  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  30228613 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 30228549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 31358130 - 31358294
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||  | ||||| | |||||||||||||||||||||||||||||||||||||||    
T  31358130 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatacaaaagaagaatgagagaaaaggatgagctacttcagaagaaggatga 31358229  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  31358230 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 31358294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 31843003 - 31843163
Alignment:
Q  2 ctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatgat 101  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||| ||||||    
T  31843003 ctatccagaagaagagtacatcacaagagctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctacttcagaagaaagatgat 31843102  T
Q  102 cagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaac 162  Q
    |||||||||||| | || ||| |||||||||||||||||||||||||||||||||||||||    
T  31843103 cagatcaagtatttcttagaatagttgtataagcaagcccaaccttagttgcacacccaac 31843163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 36583766 - 36583602
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||||| | |||||| ||||||||||||||||||||||||||||||||    
T  36583766 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaaggatga 36583667  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  36583666 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 36583602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 42052405 - 42052569
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||||| | |||||| ||||||||||||||||||||||||||||||||    
T  42052405 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaaggatga 42052504  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  42052505 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 42052569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 9345577 - 9345741
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||||| | |||||| |||||||||||||||||| |||||||||||||    
T  9345577 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctactttagaagaaggatga 9345676  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  9345677 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 9345741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 24589321 - 24589157
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||||| | ||||||  |||||||||||||||||||||||||||||||    
T  24589321 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgaggtaaaaggatgagctacttcagaagaaggatga 24589222  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  24589221 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 24589157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 24818108 - 24817944
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||| | | |||||| ||||||||||||||||||||||||||||||||    
T  24818108 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatgagggaaaaggatgagctacttcagaagaaggatga 24818009  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  24818008 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 24817944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 6985335 - 6985499
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||   |||| | | |||||| ||||||||||||||||||||||||||||||||    
T  6985335 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctacttcagaagaaggatga 6985434  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  6985435 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 6985499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 14039634 - 14039798
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||   |||| | | |||||| ||||||||||||||||||||||||||||||||    
T  14039634 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctacttcagaagaaggatga 14039733  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  14039734 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 14039798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 14448293 - 14448129
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||   |||| | | |||||| ||||||||||||||||||||||||||||||||    
T  14448293 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctacttcagaagaaggatga 14448194  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  14448193 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 14448129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 14559325 - 14559161
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||   |||| | | |||||| ||||||||||||||||||||||||||||||||    
T  14559325 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctacttcagaagaaggatga 14559226  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  14559225 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 14559161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 22685040 - 22685204
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||   |||| | | |||||| ||||||||||||||||||||||||||||||||    
T  22685040 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctacttcagaagaaggatga 22685139  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  22685140 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 22685204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 23305883 - 23306047
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||   |||| | | |||||| ||||||||||||||||||||||||||||||||    
T  23305883 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctacttcagaagaaggatga 23305982  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  23305983 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 23306047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 27469598 - 27469762
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||   |||| | | |||||| ||||||||||||||||||||||||||||||||    
T  27469598 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctacttcagaagaaggatga 27469697  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  27469698 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 27469762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 27043476 - 27043313
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||   |||| | | |||||| ||||||||||||||||||||||||||||||||    
T  27043476 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctacttcagaagaaggatga 27043377  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactc 164  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  27043376 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 27043313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 27604713 - 27604554
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||| | ||||||||||||||||||||||||| |||||||||||||    
T  27604713 tctatccagaagaagagtacatcacaaggactgcaagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctacttaagaagaaggatga 27604614  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacaccca 160  Q
     || || |||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  27604613 gcaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacaccca 27604554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 39492154 - 39491990
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||   |||| | | ||||||  |||||||||||||||||||||||||||||||    
T  39492154 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgaggaaaaaggatgagctacttcagaagaaggatga 39492055  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  39492054 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 39491990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 35225099 - 35225285
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||| ||||||||||| |||||||| |||||||| |||||||||||||||  ||| | |||||| |||||||||||||||||| ||||||| |||||    
T  35225099 tctatcctgaagaagagtatatcacaagagctgcaaggattcatgctgggcatgtaagaagaatgagggaaaaggatgagctacttaagaagaaagatga 35225198  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttct 190  Q
     |||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||    
T  35225199 acagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc---tagcttgtttttacttttgttct 35225285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 40400004 - 40400161
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||| |||||||||||||    
T  40400004 tctatccagaagaagaatacattacaagggctgcaagaattcatgctgggtataaaagaagaatgagagaaaaggatgagctacttaagaagaaggatga 40400103  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacc 158  Q
     || || |||||||||||||||||| |||| |||||||||||||| ||||||||||||    
T  40400104 gcaaattaagtatcttttggaacagatgtacaagcaagcccaaccctagttgcacacc 40400161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 5291834 - 5291675
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||  |||||| | ||||||||||||||||||||||||| |||||||||||||    
T  5291834 tctatccagaagaagagtacattataagggctgcaagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctacttaagaagaaggatga 5291735  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacaccca 160  Q
     || || |||||||| |||||| || ||||||||||||||||||||||||||||||||||    
T  5291734 gcaaattaagtatctcttggaatagatgtataagcaagcccaaccttagttgcacaccca 5291675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 39361285 - 39361443
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||| |||||||||||||||||  ||||||| |||||    
T  39361285 tctacccagaagaagagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaatgagggaaaaggatgagctactcaagaagaatgatga 39361384  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacaccc 159  Q
     || || |||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  39361385 gcaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacaccc 39361443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 22156089 - 22156244
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||| |||||||  ||||||||||||||||| | ||||| | | |||| ||||| |||||||||||  | |||||||||||    
T  22156089 tctatccagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaagaagattgagggaaaaagatgagctactcaaaaagaaggatga 22156188  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcaca 156  Q
     || ||||||||||| ||||||||| |||| |||||| ||||||||||||||||||    
T  22156189 gcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 22156244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 15 - 161
Target Start/End: Complemental strand, 1110441 - 1110295
Alignment:
Q  15 gagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatgatcagatcaagtatc 114  Q
    ||||||||  ||||| |||| |||||||||||||||   ||||| | | |||||| ||||||||| | |||||||||||||||||| || || |||||||    
T  1110441 gagtacatttcaaggactgctagaattcatgctgggttgaaaagtagactgagagcaaaggatgaacaacttcagaagaaggatgagcaaattaagtatc 1110342  T
Q  115 ttttggaacagttgtataagcaagcccaaccttagttgcacacccaa 161  Q
    | |||||||||||||||||||||||| ||||||||||||||||||||    
T  1110341 tattggaacagttgtataagcaagccaaaccttagttgcacacccaa 1110295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 20796658 - 20796818
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||| ||||||||  ||||  |||  |||||||| || |||   ||||| | | |||||| ||||||||| | ||||||||||||||||||    
T  20796658 tctatccagaagatgagtacatttcaagaactgttagaattcaagccgggttgaaaagaagactgagagcaaaggatgaacaacttcagaagaaggatga 20796757  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaa 161  Q
     ||||| || ||||||||||||||| ||||||||| |||| ||||||||||||||||||||    
T  20796758 gcagattaaatatcttttggaacagatgtataagctagccaaaccttagttgcacacccaa 20796818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 72 - 190
Target Start/End: Original strand, 36697303 - 36697418
Alignment:
Q  72 aaggatgagctacttcagaagaaggatgatcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagc 171  Q
    ||||||||||||||||||||||||||||| ||||| |    ||| || ||||||||| | |||||||||||||||||||||||||||||||||   ||||    
T  36697303 aaggatgagctacttcagaagaaggatgaacagattagacttctcttagaacagttgaagaagcaagcccaaccttagttgcacacccaactc---tagc 36697399  T
Q  172 ttgtttttacttgtgttct 190  Q
    ||||| |||||| ||||||    
T  36697400 ttgttcttacttttgttct 36697418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 36697211 - 36697310
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    |||||||||| | ||| ||||||||||| |||||||||||| ||||||||||||| |||||  | ||||| ||||| || ||||||||||||||||||||    
T  36697211 tctatccagaggcagaatacatcacaagagctgcaagaatttatgctgggcataagaggaagttaagagagaaggaagaactacttcagaagaaggatga 36697310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 137; Significance: 2e-71; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 2 - 162
Target Start/End: Complemental strand, 451912 - 451752
Alignment:
Q  2 ctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatgat 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||| ||||||    
T  451912 ctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctacttcagaagaaagatgat 451813  T
Q  102 cagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaac 162  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  451812 cagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 451752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 30935995 - 30936155
Alignment:
Q  2 ctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatgat 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||| ||||||    
T  30935995 ctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctacttcagaagaaagatgat 30936094  T
Q  102 cagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaac 162  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  30936095 cagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 30936155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 2 - 162
Target Start/End: Complemental strand, 21997752 - 21997592
Alignment:
Q  2 ctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatgat 101  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | || |||||||||||||||||||||||||| ||||||    
T  21997752 ctatccagaagaagagtacatcacaagggctgcaagaattcatgttgggcataaaaggaaattaagggaaaaggatgagctacttcagaagaaagatgat 21997653  T
Q  102 cagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaac 162  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  21997652 cagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 21997592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 55754731 - 55754895
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||||| | |||||||||||||||||||||||||||||||||||||||    
T  55754731 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagagaaaaggatgagctacttcagaagaaggatga 55754830  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  55754831 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 55754895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 24026941 - 24027100
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||| |||||||||||||||||  |||||||||||||    
T  24026941 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaatgagggaaaaggatgagctactcaagaagaaggatga 24027040  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacaccca 160  Q
     || ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  24027041 gcaaatcaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacaccca 24027100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 36019672 - 36019508
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||| | | |||||| ||||||||||||||||||||||||||||||||    
T  36019672 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatgagggaaaaggatgagctacttcagaagaaggatga 36019573  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||    
T  36019572 tcagatcaagtatctcttagaacaattgtataagcaagcccaaccttagttgcacacccaactct 36019508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 24641652 - 24641466
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||| ||||||||||| |||||||| ||||||||||||||||||||||||  ||| | |||||| |||||||||||||||||| ||||||| |||||    
T  24641652 tctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctacttaagaagaaagatga 24641553  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttct 190  Q
     |||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||    
T  24641552 acagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc---tagcttgtttttacttttgttct 24641466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 17919451 - 17919294
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||| |||||||||||||||||  |||||||||||||    
T  17919451 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaatgagggaaaaggatgagctactcaagaagaaggatga 17919352  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacc 158  Q
     || ||||||||||||||||||||| |||| ||| |||||||||||||||||||||||    
T  17919351 gcaaatcaagtatcttttggaacagatgtacaagaaagcccaaccttagttgcacacc 17919294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 10750071 - 10750235
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||   |||| | | |||||| ||||||||||||||||||||||||||||||||    
T  10750071 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctacttcagaagaaggatga 10750170  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||    
T  10750171 tcagatcaagtatctcttagaacagttgtctaagcaagcccaaccttagttgcacacccaactct 10750235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 10963840 - 10964004
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||   |||| | | |||||| ||||||||||||||||||||||||||||||||    
T  10963840 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctacttcagaagaaggatga 10963939  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||    
T  10963940 tcagatcaagtatctcttagaacagttgtctaagcaagcccaaccttagttgcacacccaactct 10964004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 18761984 - 18762162
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||| || ||||||||| ||||||||||||||||||||||||||  ||| | |||||| |||||||||||||||||| ||||||| |||||    
T  18761984 tctatccagaagaggaatacatcacatgggctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctacttaagaagaaagatga 18762083  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttact 182  Q
     || ||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||    
T  18762084 acaaatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc---tagcttgtttttact 18762162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 27657985 - 27657799
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||| ||||||||||| |||||||| |||||||| |||||||||||||||  ||| | |||||| |||||||||||||||||| | ||||| |||||    
T  27657985 tctatcctgaagaagagtatatcacaagagctgcaaggattcatgctgggcatgtaagaagaatgagggaaaaggatgagctacttaaaaagaaagatga 27657886  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttct 190  Q
     |||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||    
T  27657885 acagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc---tagcttgtttttacttttgttct 27657799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 19953858 - 19954017
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||| | ||| || |||||||||||||||||  |||||||||||||    
T  19953858 tctacccagaagaatagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaataagggaaaaggatgagctactcaagaagaaggatga 19953957  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacaccca 160  Q
     || || |||||||||||||||||| |||| ||||||| |||||||||||||||||||||    
T  19953958 gcaaattaagtatcttttggaacagatgtacaagcaagtccaaccttagttgcacaccca 19954017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 40469495 - 40469654
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    |||||| ||||||||||||||| ||||||||||| ||||||||||||||   |||||| | |||||||||||||||||||||||||||||||||||||||    
T  40469495 tctatctagaagaagagtacattacaagggctgctagaattcatgctggatttaaaagaagaatgagagaaaaggatgagctacttcagaagaaggatga 40469594  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacaccca 160  Q
     || || ||||| |||||||||||  |||||||||||||| |||||||||||||||||||    
T  40469595 gcaaattaagtaccttttggaacaaatgtataagcaagccaaaccttagttgcacaccca 40469654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 16257267 - 16257112
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||| |||||||  ||||||||||||||||| | ||||| | | |||| ||||| |||||||||||  | |||||||||||    
T  16257267 tctatccagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaagaagattgagggaaaaagatgagctactcaaaaagaaggatga 16257168  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcaca 156  Q
     || ||||||||||| ||||||||| |||| |||||| ||||||||||||||||||    
T  16257167 gcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 16257112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 304
Target Start/End: Original strand, 18762203 - 18762275
Alignment:
Q  232 tataaatattatcattgtttctgaaaatttaagttctacagttttaactctgatgatatttattgtttttaat 304  Q
    ||||||||||||||||||||||||||  ||| | ||||   |||||||||| |||||||||||||||||||||    
T  18762203 tataaatattatcattgtttctgaaatattatgctctattcttttaactctaatgatatttattgtttttaat 18762275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 304
Target Start/End: Complemental strand, 27657765 - 27657692
Alignment:
Q  232 tataaatattatcattgtttctgaaaatttaagttcta-cagttttaactctgatgatatttattgtttttaat 304  Q
    ||||||||||||||||||||||||||  ||| ||||||    |||||||||| |||||||||||||||||||||    
T  27657765 tataaatattatcattgtttctgaaatattatgttctattttttttaactctaatgatatttattgtttttaat 27657692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 304
Target Start/End: Complemental strand, 24641432 - 24641359
Alignment:
Q  232 tataaatattatcattgtttctgaaaatttaagttcta-cagttttaactctgatgatatttattgtttttaat 304  Q
    ||||||||||||||||||||||||||  ||| ||||||    |||||||||| ||||||||||||| |||||||    
T  24641432 tataaatattatcattgtttctgaaatattatgttctattttttttaactctaatgatatttattgattttaat 24641359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 137; Significance: 2e-71; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 9907076 - 9907236
Alignment:
Q  2 ctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatgat 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||    
T  9907076 ctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctacttcagaagaaggatgat 9907175  T
Q  102 cagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaac 162  Q
    |||||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||    
T  9907176 cagatcaagtatctcttagaacagttgtataagtaagcccaaccttagttgcacacccaac 9907236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 9772247 - 9772407
Alignment:
Q  2 ctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatgat 101  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||| ||||||    
T  9772247 ctatccagaagaagagtacatcacaagagctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctacttcagaagaaagatgat 9772346  T
Q  102 cagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaac 162  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  9772347 cagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 9772407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 40223636 - 40223475
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||| | |||||| ||||||||||||||||||||||||||||||||    
T  40223636 tctatccagaagaagagtacatcacaagggctgctagaattcaggctgggtataaaagaagaatgagggaaaaggatgagctacttcagaagaaggatga 40223537  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaac 162  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  40223536 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 40223475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 43346702 - 43346538
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||||| | |||||| ||||||||||||||||||||||||||||||||    
T  43346702 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaaggatga 43346603  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  43346602 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 43346538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 35254336 - 35254150
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||| ||||||||||| |||||||| ||||||||||||||||||||||||  ||| | |||||| |||||||||||||||||| ||||||| |||||    
T  35254336 tctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctacttaagaagaaagatga 35254237  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttct 190  Q
     |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||    
T  35254236 acagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc---tagcttgtttttacttttgttct 35254150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 35264945 - 35264759
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||| ||||||||||| |||||||| ||||||||||||||||||||||||  ||| | |||||| |||||||||||||||||| ||||||| |||||    
T  35264945 tctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctacttaagaagaaagatga 35264846  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttct 190  Q
     |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||    
T  35264845 acagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc---tagcttgtttttacttttgttct 35264759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 24337279 - 24337436
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||  |||||||||||||    
T  24337279 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaatgagagaaaaggatgagctactcaagaagaaggatga 24337378  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacc 158  Q
     || || |||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  24337379 gcaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacacc 24337436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 10268285 - 10268121
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||| | | |||||| ||||||||||||||||||||||| ||||||||    
T  10268285 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatgagggaaaaggatgagctacttcagaaaaaggatga 10268186  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  10268185 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 10268121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 10278862 - 10278698
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||| | | |||||| ||||||||||||||||||||||| ||||||||    
T  10278862 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatgagggaaaaggatgagctacttcagaaaaaggatga 10278763  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  10278762 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 10278698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 11404360 - 11404524
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||   |||| | | |||||| ||||||||||||||||||||||||||||||||    
T  11404360 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctacttcagaagaaggatga 11404459  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  11404460 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 11404524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 27222723 - 27222537
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||| ||||||||||| |||||||| ||||||||||||||||||||||||  ||| | |||||| |||||||||||||||||| ||||||| |||||    
T  27222723 tctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctacttaagaagaaagatga 27222624  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttct 190  Q
     |||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||    
T  27222623 acagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc---tagcttgtttttacttttgttct 27222537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 29245552 - 29245393
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||  |||||| | ||||||||||||||||||||||||| |||||||||||||    
T  29245552 tctatccagaagaagagtacattacaagggctgcaagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctacttaagaagaaggatga 29245453  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacaccca 160  Q
     || || |||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  29245452 gcaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacaccca 29245393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 43083994 - 43083835
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||| | ||||||||||||||||||||||||| |||||||||||||    
T  43083994 tctatccagaagaagagtacatcacaagggctgcaagaattcatgttgggtttaaaagaagaatgagagaaaaggatgagctacttaagaagaaggatga 43083895  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacaccca 160  Q
     || || |||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  43083894 gcaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacaccca 43083835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 34803301 - 34803447
Alignment:
Q  16 agtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatgatcagatcaagtatct 115  Q
    ||||||||||||||| ||| |||||||| |||||| ||||||| | |||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  34803301 agtacatcacaagggttgctagaattcaggctgggtataaaagaagaatgagggaaaaggatgaactacttcagaagaaggatgatcagatcaagtatct 34803400  T
Q  116 tttggaacagttgtataagcaagcccaaccttagttgcacacccaac 162  Q
     || |||||||||||||||||||||||||||||||||||||||||||    
T  34803401 cttagaacagttgtataagcaagcccaaccttagttgcacacccaac 34803447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 4211239 - 4211085
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||| |||||||  ||||||||||||||||  | ||||| | ||||||||||||||||||||||||  | |||||||||||    
T  4211239 tctatccagaagaagagtacatctcaagggcaacaagaattcatgctggatacaaaagaagaatgagagaaaaggatgagctactcaaaaagaaggatga 4211140  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcac 155  Q
     || ||||||||||| ||||||||| |||| |||||| |||||||||||||||||    
T  4211139 gcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcac 4211085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 22959218 - 22959373
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||| |||||||  ||||||||||||||||| | ||||| | | |||| ||||| |||||||||||  | |||||||||||    
T  22959218 tctatccagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaagaagattgagggaaaaagatgagctactcaaaaagaaggatga 22959317  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcaca 156  Q
     || ||||||||||| ||||||||| |||| |||||| ||||||||||||||||||    
T  22959318 gcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 22959373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 304
Target Start/End: Complemental strand, 27222503 - 27222431
Alignment:
Q  232 tataaatattatcattgtttctgaaaatttaagttctacagttttaactctgatgatatttattgtttttaat 304  Q
    ||||||||||||||||||||||||||  ||| ||||||   |||||||||| ||||||||||||| |||||||    
T  27222503 tataaatattatcattgtttctgaaatattatgttctatttttttaactctaatgatatttattgattttaat 27222431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 304
Target Start/End: Complemental strand, 35254116 - 35254043
Alignment:
Q  232 tataaatattatcattgtttctgaaaatttaagttcta-cagttttaactctgatgatatttattgtttttaat 304  Q
    ||||||||||||||||||||||||||  ||| ||||||    |||||||||| ||||||||||||| |||||||    
T  35254116 tataaatattatcattgtttctgaaatattatgttctattttttttaactctaatgatatttattgattttaat 35254043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 304
Target Start/End: Complemental strand, 35264725 - 35264652
Alignment:
Q  232 tataaatattatcattgtttctgaaaatttaagttcta-cagttttaactctgatgatatttattgtttttaat 304  Q
    ||||||||||||||||||||||||||  ||| ||||||    |||||||||| ||||||||||||| |||||||    
T  35264725 tataaatattatcattgtttctgaaatattatgttctattttttttaactctaatgatatttattgattttaat 35264652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 137; Significance: 2e-71; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 2 - 162
Target Start/End: Complemental strand, 12731791 - 12731631
Alignment:
Q  2 ctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatgat 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||| ||||||    
T  12731791 ctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctacttcagaagaaagatgat 12731692  T
Q  102 cagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaac 162  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  12731691 cagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 12731631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 2 - 162
Target Start/End: Complemental strand, 12742384 - 12742224
Alignment:
Q  2 ctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatgat 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||| ||||||    
T  12742384 ctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctacttcagaagaaagatgat 12742285  T
Q  102 cagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaac 162  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  12742284 cagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 12742224  T

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Target: chr1; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 38096368 - 38096204
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||||| | ||||||||||||||||||||||||||| |||||||||||    
T  38096368 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagagaaaaggatgagctacttcaaaagaaggatga 38096269  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  38096268 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 38096204  T

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Target: chr1; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 4168560 - 4168401
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||| |||||||||||||    
T  4168560 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaatgagagaaaaggatgagctacttaagaagaaggatga 4168461  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacaccca 160  Q
     || || |||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  4168460 gcaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacaccca 4168401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 7508582 - 7508418
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||| | | |||||| ||||||||||||||||||||||||||||||||    
T  7508582 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatgagggaaaaggatgagctacttcagaagaaggatga 7508483  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  7508482 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 7508418  T

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Target: chr1; HSP #6
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 36245946 - 36246110
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    |||||||| |||||||||||||||| |||||||| |||||||| |||||  ||||||| | |||||| ||||||||||||||||||||||||||||||||    
T  36245946 tctatccataagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaaggatga 36246045  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  36246046 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 36246110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 51655390 - 51655554
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||   |||| | | |||||| ||||||||||||||||||||||||||||||||    
T  51655390 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctacttcagaagaaggatga 51655489  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  51655490 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 51655554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 35400058 - 35400244
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||| ||||||||||| |||||||| ||||||||||||||||||||||||  ||| | |||||| |||||||||||||||||| ||||||| |||||    
T  35400058 tctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctacttaagaagaaagatga 35400157  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttct 190  Q
     |||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||    
T  35400158 acagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc---tagcttgtttttacttttgttct 35400244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 35647583 - 35647769
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||| ||||||||||| |||||||| ||||||||||||||||||||||||  ||| | |||||| |||||||||||||||||| ||||||| |||||    
T  35647583 tctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctacttaagaagaaagatga 35647682  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttct 190  Q
     |||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||    
T  35647683 acagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc---tagcttgtttttacttttgttct 35647769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 5649272 - 5649429
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||  | |||||||||||    
T  5649272 tctacccagaagaagagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaatgagagaaaaggatgagctactcaataagaaggatga 5649371  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacc 158  Q
     ||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  5649372 gcagattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacacc 5649429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 5834509 - 5834323
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||| ||||||||||| |||||||| |||||||| |||||||||||||||  ||| | |||||| |||||||||||||||||| ||||||| |||||    
T  5834509 tctatcctgaagaagagtatatcacaagagctgcaaggattcatgctgggcatgtaagaagaatgagggaaaaggatgagctacttaagaagaaagatga 5834410  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttct 190  Q
     |||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||    
T  5834409 acagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc---tagcttgtttttacttttgttct 5834323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 47617452 - 47617616
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||| ||||||||||| |||||||| ||||||||||||||||||||||||  ||| | |||||| |||||||||||||||||| ||||||| |||||    
T  47617452 tctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctacttaagaagaaagatga 47617551  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
     |||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||    
T  47617552 acagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactct 47617616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 3172905 - 3172719
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||| ||||||||||| |||||||| |||||||| |||||||||||||||  ||| | |||||| |||||||||||||||||| | ||||| |||||    
T  3172905 tctatcctgaagaagagtatatcacaagagctgcaaggattcatgctgggcatgtaagaagaatgagggaaaaggatgagctacttaaaaagaaagatga 3172806  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttct 190  Q
     |||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||    
T  3172805 acagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc---tagcttgtttttacttttgttct 3172719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 19180244 - 19180085
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    |||||| |||||||||||| || |||||||||||||||||||||||||||  |||||| | ||||||||||||||||||||||||| |||||||||||||    
T  19180244 tctatctagaagaagagtatattacaagggctgcaagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctacttaagaagaaggatga 19180145  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacaccca 160  Q
     || || |||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  19180144 gcaaattaagtatctcttggaacagatgtataagcaagcccaaccttagttgcacaccca 19180085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 21864981 - 21864824
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||| | |||||| |||||||||||||||||  | |||||||||||    
T  21864981 tctatccagaagaagagtacatcacaagggcaacaagaattcatgctgggtataaaagaagaatgagggaaaaggatgagctactcaaaaagaaggatga 21864882  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacc 158  Q
     || ||||||||||| ||||||||| |||| |||||| ||||||||||||||||||||    
T  21864881 gcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcacacc 21864824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 153166 - 153326
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||| ||||||||  ||||| |||| |||||||||||||||   ||||| | | |||||| |||| |||| | ||||||||||||||||||    
T  153166 tctatccagaagatgagtacatttcaaggactgctagaattcatgctgggttgaaaagtagactgagagcaaagaatgaacaacttcagaagaaggatga 153265  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaa 161  Q
     || || |||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  153266 gcaaattaagtatctattggaacagttgtataagcaagccaaaccttagttgcacacccaa 153326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 12622692 - 12622847
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||| |||||||  ||||||||||||||||  | ||||| | |||||| |||||||||||||||||  | |||||||| ||    
T  12622692 tctatccagaagaagagtacatctcaagggcaacaagaattcatgctggatacaaaagaagaatgagggaaaaggatgagctactcaaaaagaaggacga 12622791  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcaca 156  Q
     || ||||||||||| ||||||||| |||| |||||| ||||||||||||||||||    
T  12622792 gcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 12622847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 304
Target Start/End: Complemental strand, 3172685 - 3172611
Alignment:
Q  232 tataaatattatcattgtttctgaaaatttaagttcta--cagttttaactctgatgatatttattgtttttaat 304  Q
    ||||||||||||||||||||||||||  ||| ||||||     |||||||||| |||||||||||||||||||||    
T  3172685 tataaatattatcattgtttctgaaatattatgttctatttttttttaactctaatgatatttattgtttttaat 3172611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 304
Target Start/End: Original strand, 35400278 - 35400351
Alignment:
Q  232 tataaatattatcattgtttctgaaaatttaagttcta-cagttttaactctgatgatatttattgtttttaat 304  Q
    ||||||||||||||||||||||||||  ||| ||||||    |||||||||| ||||||||||||| |||||||    
T  35400278 tataaatattatcattgtttctgaaatattatgttctattttttttaactctaatgatatttattgattttaat 35400351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 304
Target Start/End: Original strand, 35647803 - 35647876
Alignment:
Q  232 tataaatattatcattgtttctgaaaatttaagttcta-cagttttaactctgatgatatttattgtttttaat 304  Q
    ||||||||||||||||||||||||||  ||| ||||||    |||||||||| ||||||||||||| |||||||    
T  35647803 tataaatattatcattgtttctgaaatattatgttctattttttttaactctaatgatatttattgattttaat 35647876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 125; Significance: 2e-64; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 209102 - 209266
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||||| | |||||| ||||||||||||||||||||||||||||||||    
T  209102 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaaggatga 209201  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  209202 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 209266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 243153 - 242989
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||||| | |||||| ||||||||||||||||||||||||||||||||    
T  243153 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaaggatga 243054  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  243053 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 242989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 722725 - 722889
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||||| | |||||| ||||||||||||||||||||||||||||||||    
T  722725 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaaggatga 722824  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  722825 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 722889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 796523 - 796359
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||||| | |||||| ||||||||||||||||||||||||||||||||    
T  796523 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaaggatga 796424  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  796423 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 796359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 15766096 - 15766260
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||| | |||||| |||||| ||||||||||| |||||||||||||    
T  15766096 tctatccagaagaagagtacatcacaagggctgctagaattcaggctgggtataaaagaagaatgagggaaaagaatgagctactttagaagaaggatga 15766195  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  15766196 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 15766260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 15790233 - 15790397
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||| | |||||| |||||||||||||||||| |||||||||||||    
T  15790233 tctatccagaagaagagtacatcacaagggctgctagaattcaggctgggtataaaagaagaatgagggaaaaggatgagctactttagaagaaggatga 15790332  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    || |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  15790333 tcggatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 15790397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 29078051 - 29077887
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||||| | |||||| ||||||||||||||||||||||||||||||||    
T  29078051 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaaggatga 29077952  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  29077951 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 29077887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 32087218 - 32087382
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||||| | |||||| ||||||||||||||||||||||||||||||||    
T  32087218 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaaggatga 32087317  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  32087318 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 32087382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 36294270 - 36294106
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||   |||| | | |||||||||||||||||||||||||||||||||||||||    
T  36294270 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagagaaaaggatgagctacttcagaagaaggatga 36294171  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  36294170 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 36294106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 26112627 - 26112468
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||| || ||||||||||    
T  26112627 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaatgagagaaaaggatgagctacttaagcagaaggatga 26112528  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacaccca 160  Q
     || || |||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  26112527 acaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacaccca 26112468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 3358154 - 3358318
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||   |||| | | |||||| ||||||||||||||||||||||||||||||||    
T  3358154 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctacttcagaagaaggatga 3358253  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  3358254 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 3358318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 9342475 - 9342311
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||   |||| | | |||||| ||||||||||||||||||||||||||||||||    
T  9342475 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctacttcagaagaaggatga 9342376  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  9342375 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 9342311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 13687513 - 13687699
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||| ||||||||||| |||||||| ||||||||||||||||||||||||  ||| | |||||| |||||||||||||||||| ||||||| |||||    
T  13687513 tctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctacttaagaagaaagatga 13687612  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttct 190  Q
     |||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||    
T  13687613 acagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc---tagcttgtttttacttttgttct 13687699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 36079275 - 36079089
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||| ||||||||||| |||||||| ||||||||||||||||||||||||  ||| | |||||| |||||||||||||||||| ||||||| |||||    
T  36079275 tctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctacttaagaagaaagatga 36079176  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttct 190  Q
     |||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||    
T  36079175 acagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc---tagcttgtttttacttttgttct 36079089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 19130097 - 19129938
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||  |||||| | ||||||||||||||||||||||||| ||||||||||| |    
T  19130097 tctatccagaagaagagtacattacaagggctgcaagaattcatgttgggtttaaaagaagaatgagagaaaaggatgagctacttaagaagaaggatca 19129998  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacaccca 160  Q
     || || |||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  19129997 gcaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacaccca 19129938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 6152447 - 6152292
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    |||||| |||||||||||||||| |||||||  ||||||||||||||||| | ||||| | | |||| |||||||||||||||||  | |||||| ||||    
T  6152447 tctatcgagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaagaagattgagggaaaaggatgagctactcaaaaagaagaatga 6152348  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcaca 156  Q
     || ||||||||||| ||||||||| |||| |||||| ||||||||||||||||||    
T  6152347 gcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 6152292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 72 - 190
Target Start/End: Complemental strand, 44482396 - 44482281
Alignment:
Q  72 aaggatgagctacttcagaagaaggatgatcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagc 171  Q
    ||||||||||||||||||||||||||||| ||||| |    ||| || |||||| || | |||||||||||||||||||||||||||||||||   ||||    
T  44482396 aaggatgagctacttcagaagaaggatgaacagattagacttctcttagaacagctgaagaagcaagcccaaccttagttgcacacccaactc---tagc 44482300  T
Q  172 ttgtttttacttgtgttct 190  Q
    ||||| |||||| ||||||    
T  44482299 ttgttcttacttttgttct 44482281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 44482488 - 44482389
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    |||||||||| | ||| ||||||||||| |||||||||||| ||||||||||||| |||||  | ||||| ||||| || ||||||||||||||||||||    
T  44482488 tctatccagaggcagaatacatcacaagagctgcaagaatttatgctgggcataagaggaagttaagagagaaggaagaactacttcagaagaaggatga 44482389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 157
Target Start/End: Original strand, 30324179 - 30324333
Alignment:
Q  3 tatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatgatc 102  Q
    ||||||||||| || ||||   |||||||||  |||||||| |||||||  ||||| | | |||||| | ||  ||| | |||||||||||||||||| |    
T  30324179 tatccagaagatgattacacttcaagggctgatagaattcaagctgggctgaaaagaagagtgagagcacagactgaacaacttcagaagaaggatgagc 30324278  T
Q  103 agatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacac 157  Q
    |||| || ||||||||||||||| ||| ||||| |||| ||||||||||||||||    
T  30324279 agattaaatatcttttggaacagatgtctaagctagccaaaccttagttgcacac 30324333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 19226290 - 19226134
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||| || ||||   |||||||||  |||||||| |||||||  ||||| | | |||||| | || | || | ||||||||||||||||||    
T  19226290 tctatccagaagatgattacacttcaagggctgatagaattcaagctgggctgaaaagaagactgagagcacagaaagaacaacttcagaagaaggatga 19226191  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacac 157  Q
     ||||| || ||||| ||||||||| ||| ||||| |||| ||||||||||||||||    
T  19226190 gcagattaaatatctattggaacagatgtctaagctagccaaaccttagttgcacac 19226134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 304
Target Start/End: Original strand, 13687733 - 13687806
Alignment:
Q  232 tataaatattatcattgtttctgaaaatttaagttcta-cagttttaactctgatgatatttattgtttttaat 304  Q
    ||||||||||||||||||||||||||  ||| ||||||    |||||||||| ||||||||||||| |||||||    
T  13687733 tataaatattatcattgtttctgaaatattatgttctattttttttaactctaatgatatttattgattttaat 13687806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 116; Significance: 6e-59; HSPs: 2)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 46497 - 46683
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||| ||||||||||| |||||||| ||||||||||||||||||||||||  ||| | |||||| |||||||||||||||||| ||||||| |||||    
T  46497 tctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctacttaagaagaaagatga 46596  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttct 190  Q
     |||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||    
T  46597 acagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc---tagcttgtttttacttttgttct 46683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 304
Target Start/End: Original strand, 46717 - 46789
Alignment:
Q  232 tataaatattatcattgtttctgaaaatttaagttctacagttttaactctgatgatatttattgtttttaat 304  Q
    ||||||||||||||||||||||||||  ||| ||||||   |||||||||| ||||||||||||| |||||||    
T  46717 tataaatattatcattgtttctgaaatattatgttctatttttttaactctaatgatatttattgattttaat 46789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 113; Significance: 4e-57; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 32474 - 32310
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||   |||| | | |||||| |||||||||||||||||||| |||||||||||    
T  32474 tctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctacttcaaaagaaggatga 32375  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactct 165  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  32374 tcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 32310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0906 (Bit Score: 105; Significance: 2e-52; HSPs: 2)
Name: scaffold0906
Description:

Target: scaffold0906; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 3439 - 3599
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    |||| ||||| ||||| ||||||||||| |||||||||||||||||||||||||| || ||| | || ||||||||||||||||||||||||||||||||    
T  3439 tctacccagaggaagaatacatcacaagagctgcaagaattcatgctgggcataagagaaaattaagggaaaaggatgagctacttcagaagaaggatga 3538  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaa 161  Q
    ||||||||  ||||| || || |||||||||||||||||||||||||||||||||||||||    
T  3539 tcagatcagatatctcttagagcagttgtataagcaagcccaaccttagttgcacacccaa 3599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0906; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 304
Target Start/End: Original strand, 3666 - 3738
Alignment:
Q  232 tataaatattatcattgtttctgaaaatttaagttctacagttttaactctgatgatatttattgtttttaat 304  Q
    |||||||||||||||||||| | |||   || |||||| | |||||| |||||||||||||||||||||||||    
T  3666 tataaatattatcattgtttattaaatcatatgttctatacttttaattctgatgatatttattgtttttaat 3738  T

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Target: scaffold1216 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold1216
Description:

Target: scaffold1216; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 426 - 267
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    |||||||| ||||||||||||| ||||||||||| ||||||||||||||   |||||| | |||||||||||||||||||||||||||||||||||||||    
T  426 tctatccataagaagagtacattacaagggctgctagaattcatgctggatttaaaagaagaatgagagaaaaggatgagctacttcagaagaaggatga 327  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacaccca 160  Q
     || || ||||| |||||||||||  |||||||||||||| |||||||||||||||||||    
T  326 gcaaattaagtaccttttggaacaaatgtataagcaagccaaaccttagttgcacaccca 267  T

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Target: scaffold0022 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 52489 - 52649
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    ||||||||||||| ||||||||  ||||| |||| |||||||||||||||   ||||| | | |||||| ||||||||| | ||||||||||||||||||    
T  52489 tctatccagaagatgagtacatttcaaggactgctagaattcatgctgggttgaaaagtagactgagagcaaaggatgaacaacttcagaagaaggatga 52588  T
Q  101 tcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaa 161  Q
     || || |||||||| ||||||||| |||||||||||| | ||||||||||||||||||||    
T  52589 gcaaattaagtatctattggaacagatgtataagcaagtcaaaccttagttgcacacccaa 52649  T

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Target: scaffold0454 (Bit Score: 57; Significance: 9e-24; HSPs: 2)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 72 - 190
Target Start/End: Complemental strand, 2535 - 2420
Alignment:
Q  72 aaggatgagctacttcagaagaaggatgatcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagc 171  Q
    ||||||||||||||||||||||||||||| ||||| |    ||| || ||||||||| | |||||||||||||||||||||||||||||||||   ||||    
T  2535 aaggatgagctacttcagaagaaggatgaacagattagacttctcttagaacagttgaagaagcaagcccaaccttagttgcacacccaactc---tagc 2439  T
Q  172 ttgtttttacttgtgttct 190  Q
    ||||| |||||| ||||||    
T  2438 ttgttcttacttttgttct 2420  T

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Target: scaffold0454; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 2627 - 2528
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    |||||||||| | ||| ||||||||||| |||||||||||| ||||||||||||| |||||  | ||||| ||||| || ||||||||||||||||||||    
T  2627 tctatccagaggcagaatacatcacaagagctgcaagaatttatgctgggcataagaggaagttaagagagaaggaagaactacttcagaagaaggatga 2528  T

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Target: scaffold0398 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0398
Description:

Target: scaffold0398; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 161
Target Start/End: Original strand, 3258 - 3416
Alignment:
Q  3 tatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatgatc 102  Q
    ||||||||||| || |||||  |||| ||||  |||||||| |||||||  ||||| | | | |||| | || |||| | |||||||||||||||||| |    
T  3258 tatccagaagatgattacatttcaagagctgatagaattcaagctgggctgaaaagaagactaagagcacagaatgaacaacttcagaagaaggatgagc 3357  T
Q  103 agatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaa 161  Q
    |||| || ||||| ||||||||| ||||||||| |||| ||||||||||||||||||||    
T  3358 agattaaatatctattggaacagatgtataagctagccaaaccttagttgcacacccaa 3416  T

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Target: scaffold0398; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 11593 - 11671
Alignment:
Q  83 acttcagaagaaggatgatcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaa 161  Q
    |||||||||||||||||| ||||| || ||||| ||||||||| ||||||||| |||| ||||||||||||||||||||    
T  11593 acttcagaagaaggatgagcagattaaatatctattggaacagatgtataagctagccaaaccttagttgcacacccaa 11671  T

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Target: scaffold1002 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold1002
Description:

Target: scaffold1002; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 72 - 161
Target Start/End: Original strand, 2863 - 2952
Alignment:
Q  72 aaggatgagctacttcagaagaaggatgatcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaa 161  Q
    |||||||| | |||||||||||||||||| ||||| || |||||  |||||||| ||| ||||| |||| ||||||||||||||||||||    
T  2863 aaggatgaacaacttcagaagaaggatgagcagattaaatatctactggaacagatgtctaagctagccaaaccttagttgcacacccaa 2952  T

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Target: scaffold0251 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 157
Target Start/End: Complemental strand, 23832 - 23758
Alignment:
Q  83 acttcagaagaaggatgatcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacac 157  Q
    |||||| ||||||||||| ||||| || ||||||||||||||| ||| ||||| |||| ||||||||||||||||    
T  23832 acttcaaaagaaggatgagcagattaaatatcttttggaacagatgtctaagctagccaaaccttagttgcacac 23758  T

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Target: scaffold0747 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0747
Description:

Target: scaffold0747; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 3616 - 3567
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctggg 50  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  3616 tctatccagaagaagagtacatcacaagagctgcaagaatacatgctggg 3567  T

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Target: scaffold0199 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 72 - 161
Target Start/End: Complemental strand, 23892 - 23803
Alignment:
Q  72 aaggatgagctacttcagaagaaggatgatcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaa 161  Q
    ||||||||||||||||||||||||||||| ||||| |   |||| || || |||||  | || |||||||||||||||||||||||||||    
T  23892 aaggatgagctacttcagaagaaggatgaacagattagacatctcttagagcagttaaagaaacaagcccaaccttagttgcacacccaa 23803  T

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Target: scaffold0199; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 23984 - 23885
Alignment:
Q  1 tctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgagctacttcagaagaaggatga 100  Q
    |||||||||| | ||| |||||||||||  |||| |||||||  ||||||||||| |||||  | ||||| ||||| || ||||||||  ||||||||||    
T  23984 tctatccagaggcagattacatcacaagatctgctagaattcgagctgggcataataggaagctaagagagaaggaagaactacttcatcagaaggatga 23885  T

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