View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7393_low_4 (Length: 285)

Name: NF7393_low_4
Description: NF7393
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7393_low_4
NF7393_low_4
[»] chr4 (36 HSPs)
chr4 (16-268)||(13086271-13086523)
chr4 (168-268)||(44208576-44208676)
chr4 (168-268)||(35061309-35061409)
chr4 (178-268)||(31318059-31318149)
chr4 (168-268)||(33688376-33688476)
chr4 (16-87)||(13085228-13085299)
chr4 (165-268)||(53568854-53568957)
chr4 (178-268)||(10322822-10322912)
chr4 (178-268)||(35054885-35054975)
chr4 (168-268)||(31470663-31470763)
chr4 (165-268)||(15562630-15562732)
chr4 (178-268)||(44209988-44210078)
chr4 (134-266)||(25423145-25423276)
chr4 (177-268)||(45046718-45046808)
chr4 (145-268)||(40171370-40171493)
chr4 (168-268)||(11669821-11669921)
chr4 (178-269)||(25421765-25421855)
chr4 (194-265)||(31316242-31316313)
chr4 (179-268)||(40170072-40170161)
chr4 (165-268)||(53570709-53570811)
chr4 (168-269)||(37329892-37329997)
chr4 (149-268)||(48738187-48738306)
chr4 (178-268)||(34513558-34513648)
chr4 (178-268)||(53572030-53572120)
chr4 (179-268)||(13508547-13508635)
chr4 (189-268)||(45045202-45045281)
chr4 (194-267)||(25244123-25244196)
chr4 (209-268)||(10321404-10321463)
chr4 (178-268)||(44451764-44451855)
chr4 (178-268)||(28162913-28163003)
chr4 (178-268)||(34512229-34512319)
chr4 (28-87)||(2053156-2053214)
chr4 (205-268)||(11671156-11671218)
chr4 (218-268)||(53569324-53569374)
chr4 (134-203)||(11671095-11671164)
chr4 (16-56)||(6659466-6659506)
[»] chr7 (36 HSPs)
chr7 (118-268)||(38875003-38875153)
chr7 (129-268)||(43831904-43832043)
chr7 (125-269)||(43830652-43830796)
chr7 (125-268)||(43308457-43308600)
chr7 (178-268)||(15131833-15131923)
chr7 (178-268)||(46043368-46043458)
chr7 (168-268)||(3495360-3495459)
chr7 (155-268)||(38873883-38873986)
chr7 (178-267)||(33624487-33624576)
chr7 (187-268)||(45957807-45957888)
chr7 (168-268)||(33625900-33626000)
chr7 (168-268)||(38198763-38198863)
chr7 (168-268)||(46044788-46044888)
chr7 (181-268)||(38200076-38200163)
chr7 (165-268)||(3496673-3496774)
chr7 (168-268)||(43084332-43084432)
chr7 (178-268)||(46331871-46331960)
chr7 (188-268)||(43309630-43309710)
chr7 (178-268)||(46330497-46330587)
chr7 (178-267)||(37107358-37107447)
chr7 (16-87)||(5678347-5678418)
chr7 (16-87)||(5703399-5703470)
chr7 (189-268)||(43083030-43083108)
chr7 (178-268)||(44166844-44166935)
chr7 (178-268)||(45959164-45959254)
chr7 (178-241)||(44168286-44168348)
chr7 (178-268)||(8082782-8082872)
chr7 (16-64)||(13882822-13882870)
chr7 (16-64)||(13886324-13886372)
chr7 (16-58)||(4303361-4303403)
chr7 (178-268)||(40303779-40303869)
chr7 (178-268)||(8081487-8081577)
chr7 (194-268)||(12622115-12622188)
chr7 (178-268)||(47110226-47110315)
chr7 (16-58)||(4300468-4300510)
chr7 (178-268)||(38595519-38595609)
[»] chr8 (46 HSPs)
chr8 (118-268)||(42816017-42816167)
chr8 (127-268)||(39308277-39308418)
chr8 (178-268)||(37705835-37705925)
chr8 (129-268)||(39310574-39310713)
chr8 (165-268)||(13322885-13322988)
chr8 (165-268)||(39338010-39338113)
chr8 (150-268)||(42817184-42817301)
chr8 (168-268)||(13324045-13324145)
chr8 (165-268)||(1692587-1692690)
chr8 (157-268)||(14835020-14835130)
chr8 (178-268)||(36062502-36062593)
chr8 (169-268)||(37707218-37707317)
chr8 (168-267)||(21136435-21136534)
chr8 (178-268)||(21575509-21575599)
chr8 (178-268)||(24451179-24451269)
chr8 (168-269)||(24452594-24452695)
chr8 (168-268)||(21135021-21135121)
chr8 (168-268)||(41280186-41280286)
chr8 (178-268)||(16472691-16472781)
chr8 (178-268)||(16477262-16477352)
chr8 (168-268)||(39336715-39336815)
chr8 (16-87)||(18180819-18180890)
chr8 (178-268)||(35368888-35368978)
chr8 (199-268)||(14840484-14840553)
chr8 (178-251)||(36063928-36064000)
chr8 (168-268)||(35370184-35370282)
chr8 (178-248)||(16478608-16478678)
chr8 (178-267)||(32243357-32243446)
chr8 (178-268)||(35864164-35864254)
chr8 (178-268)||(45021963-45022053)
chr8 (178-268)||(3865367-3865457)
chr8 (150-268)||(22959746-22959863)
chr8 (16-54)||(22512182-22512220)
chr8 (16-74)||(22926784-22926842)
chr8 (178-268)||(44893534-44893624)
chr8 (16-74)||(22921986-22922046)
chr8 (16-87)||(26150572-26150643)
chr8 (178-232)||(3866888-3866942)
chr8 (20-58)||(42890309-42890347)
chr8 (16-58)||(42891800-42891842)
chr8 (16-49)||(22520935-22520968)
chr8 (16-64)||(6845241-6845289)
chr8 (168-212)||(35862794-35862838)
chr8 (178-268)||(30134055-30134145)
chr8 (178-268)||(32244923-32245013)
chr8 (230-268)||(35862670-35862708)
[»] chr6 (24 HSPs)
chr6 (135-268)||(7855350-7855483)
chr6 (178-268)||(15119345-15119435)
chr6 (188-268)||(7852249-7852329)
chr6 (178-269)||(22972290-22972381)
chr6 (178-269)||(23816017-23816108)
chr6 (179-268)||(22971594-22971683)
chr6 (179-268)||(23816715-23816804)
chr6 (16-87)||(11190381-11190452)
chr6 (181-268)||(17246588-17246675)
chr6 (178-252)||(8230917-8230991)
chr6 (178-268)||(5086948-5087037)
chr6 (134-267)||(3335629-3335761)
chr6 (178-269)||(5080012-5080102)
chr6 (16-75)||(26571044-26571103)
chr6 (168-268)||(18503473-18503565)
chr6 (178-268)||(21108591-21108681)
chr6 (178-229)||(5078736-5078787)
chr6 (16-74)||(30052096-30052156)
chr6 (178-268)||(289885-289974)
chr6 (16-74)||(3535929-3535987)
chr6 (16-74)||(3542140-3542198)
chr6 (194-268)||(3912939-3913013)
chr6 (178-268)||(3914982-3915072)
chr6 (16-58)||(30049827-30049869)
[»] chr5 (30 HSPs)
chr5 (135-268)||(23317997-23318130)
chr5 (134-268)||(41140081-41140215)
chr5 (168-268)||(13921147-13921247)
chr5 (165-267)||(26864933-26865035)
chr5 (178-268)||(41138727-41138817)
chr5 (168-268)||(26866172-26866272)
chr5 (168-267)||(18951138-18951237)
chr5 (178-268)||(43439950-43440040)
chr5 (171-269)||(23312657-23312755)
chr5 (178-268)||(28381317-28381407)
chr5 (179-268)||(20898447-20898536)
chr5 (134-268)||(38693899-38694033)
chr5 (147-268)||(37811963-37812084)
chr5 (188-268)||(43441375-43441454)
chr5 (178-268)||(8218504-8218595)
chr5 (165-268)||(34527593-34527695)
chr5 (178-268)||(42258414-42258504)
chr5 (147-268)||(3407384-3407504)
chr5 (168-268)||(8217217-8217316)
chr5 (188-264)||(34526727-34526803)
chr5 (187-245)||(19116882-19116940)
chr5 (178-267)||(38691690-38691779)
chr5 (16-87)||(19497410-19497480)
chr5 (16-58)||(21849107-21849149)
chr5 (16-58)||(40778922-40778964)
chr5 (178-248)||(13919781-13919851)
chr5 (203-238)||(28381087-28381122)
chr5 (178-268)||(37813249-37813339)
chr5 (178-268)||(40272136-40272226)
chr5 (204-268)||(9168467-9168531)
[»] chr1 (31 HSPs)
chr1 (168-268)||(15053347-15053447)
chr1 (178-268)||(12368715-12368805)
chr1 (178-268)||(37987198-37987288)
chr1 (168-268)||(36248034-36248134)
chr1 (178-268)||(33708020-33708110)
chr1 (178-268)||(36368398-36368488)
chr1 (168-254)||(46595868-46595954)
chr1 (168-268)||(30981451-30981550)
chr1 (168-268)||(33709440-33709540)
chr1 (168-268)||(36249354-36249453)
chr1 (178-265)||(21795897-21795984)
chr1 (165-268)||(29232136-29232239)
chr1 (165-268)||(15054684-15054787)
chr1 (178-237)||(29231069-29231128)
chr1 (178-268)||(534117-534207)
chr1 (178-268)||(21794780-21794869)
chr1 (178-268)||(27552021-27552111)
chr1 (178-268)||(36362179-36362269)
chr1 (178-268)||(12251889-12251979)
chr1 (178-268)||(37985910-37985999)
chr1 (178-268)||(51340123-51340213)
chr1 (178-268)||(12898894-12898984)
chr1 (168-237)||(30982852-30982921)
chr1 (178-267)||(51839897-51839986)
chr1 (16-87)||(42071457-42071528)
chr1 (178-268)||(11999416-11999506)
chr1 (194-268)||(12896625-12896699)
chr1 (16-74)||(50857580-50857640)
chr1 (16-47)||(12486361-12486392)
chr1 (185-268)||(51841538-51841621)
chr1 (194-268)||(51338141-51338215)
[»] chr3 (43 HSPs)
chr3 (125-268)||(19825282-19825425)
chr3 (178-266)||(54185304-54185392)
chr3 (153-268)||(3670684-3670799)
chr3 (168-266)||(116626-116724)
chr3 (178-268)||(27867777-27867867)
chr3 (178-268)||(37180069-37180159)
chr3 (168-268)||(45234417-45234516)
chr3 (178-268)||(117937-118027)
chr3 (147-269)||(19831087-19831209)
chr3 (178-268)||(50614246-50614336)
chr3 (178-268)||(44558071-44558161)
chr3 (178-268)||(54185829-54185919)
chr3 (20-87)||(19795135-19795202)
chr3 (178-268)||(32942689-32942779)
chr3 (178-268)||(32944111-32944201)
chr3 (178-254)||(37178653-37178729)
chr3 (168-268)||(53244714-53244813)
chr3 (178-245)||(19669420-19669487)
chr3 (189-268)||(50615588-50615666)
chr3 (168-265)||(45235839-45235936)
chr3 (185-268)||(32146700-32146783)
chr3 (178-268)||(32148103-32148193)
chr3 (178-268)||(33476682-33476772)
chr3 (178-268)||(41786579-41786669)
chr3 (178-267)||(8576432-8576521)
chr3 (147-268)||(52700840-52700961)
chr3 (194-268)||(41926950-41927024)
chr3 (197-267)||(53246660-53246730)
chr3 (168-229)||(1430399-1430460)
chr3 (178-268)||(41928364-41928452)
chr3 (205-268)||(45387153-45387216)
chr3 (16-58)||(5128820-5128862)
chr3 (178-268)||(8574982-8575072)
chr3 (16-54)||(45168428-45168466)
chr3 (165-238)||(44555097-44555170)
chr3 (178-253)||(44557128-44557203)
chr3 (194-268)||(25233404-25233478)
chr3 (194-252)||(53439039-53439097)
chr3 (178-267)||(52702188-52702277)
chr3 (194-268)||(31992189-31992263)
chr3 (34-87)||(1697153-1697205)
chr3 (16-87)||(39913364-39913436)
chr3 (16-87)||(41218686-41218757)
[»] scaffold0651 (2 HSPs)
scaffold0651 (178-268)||(5521-5611)
scaffold0651 (194-265)||(7384-7455)
[»] scaffold0097 (3 HSPs)
scaffold0097 (178-268)||(25554-25644)
scaffold0097 (178-254)||(23379-23455)
scaffold0097 (205-269)||(24907-24971)
[»] chr2 (36 HSPs)
chr2 (178-268)||(20721725-20721815)
chr2 (168-268)||(44493994-44494094)
chr2 (178-268)||(21438997-21439087)
chr2 (168-269)||(20721042-20721143)
chr2 (168-268)||(23787321-23787421)
chr2 (168-268)||(33001356-33001456)
chr2 (178-268)||(43931841-43931931)
chr2 (178-268)||(44492582-44492672)
chr2 (178-247)||(42486774-42486843)
chr2 (184-269)||(42488178-42488263)
chr2 (178-254)||(20719541-20719617)
chr2 (178-264)||(1373269-1373355)
chr2 (168-268)||(33000674-33000772)
chr2 (168-260)||(38276051-38276143)
chr2 (16-87)||(8781395-8781467)
chr2 (184-268)||(43933244-43933328)
chr2 (178-269)||(9190055-9190146)
chr2 (16-87)||(22264317-22264388)
chr2 (178-268)||(1373705-1373794)
chr2 (178-268)||(9112201-9112291)
chr2 (178-268)||(32319471-32319561)
chr2 (194-267)||(3104693-3104766)
chr2 (205-268)||(3105939-3106002)
chr2 (205-268)||(18671975-18672038)
chr2 (178-268)||(3119032-3119122)
chr2 (187-268)||(18673325-18673407)
chr2 (16-58)||(27952454-27952496)
chr2 (16-58)||(27956290-27956332)
chr2 (16-58)||(33655538-33655580)
chr2 (168-216)||(20701004-20701052)
chr2 (178-268)||(9111248-9111338)
chr2 (168-246)||(23788039-23788116)
chr2 (179-268)||(3117649-3117738)
chr2 (194-268)||(30982933-30983006)
chr2 (194-268)||(32317891-32317965)
chr2 (171-213)||(34477224-34477266)
[»] scaffold0093 (1 HSPs)
scaffold0093 (168-268)||(49250-49350)
[»] scaffold0003 (2 HSPs)
scaffold0003 (168-268)||(239208-239308)
scaffold0003 (168-247)||(240493-240572)
[»] scaffold0287 (1 HSPs)
scaffold0287 (165-268)||(214-315)
[»] scaffold0005 (2 HSPs)
scaffold0005 (147-268)||(282613-282734)
scaffold0005 (178-268)||(283762-283852)
[»] scaffold0385 (1 HSPs)
scaffold0385 (187-268)||(10463-10544)
[»] scaffold0148 (2 HSPs)
scaffold0148 (168-264)||(38874-38970)
scaffold0148 (195-268)||(34674-34747)
[»] scaffold0110 (1 HSPs)
scaffold0110 (16-58)||(46840-46882)
[»] scaffold0026 (2 HSPs)
scaffold0026 (178-268)||(100861-100951)
scaffold0026 (199-268)||(100959-101028)


Alignment Details
Target: chr4 (Bit Score: 185; Significance: 1e-100; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 16 - 268
Target Start/End: Original strand, 13086271 - 13086523
Alignment:
Q  16 attgagagaaaatctcgaataattttattgaataaaaaagtgtctcttatgctgcataatgttctgtttaaactttacgccttatttgtttaaacttagc 115  Q
    ||||||||||||||||||||||||||||||||| |||||||| | |||| || |||||||||||||||||||||||| |||||||||||||||||||||     
T  13086271 attgagagaaaatctcgaataattttattgaattaaaaagtgccccttaggccgcataatgttctgtttaaactttatgccttatttgtttaaacttagt 13086370  T
Q  116 tttttgcctccgttaacccaatcatcaacaattgacggtagggaccaaattcgctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagt 215  Q
    | ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  13086371 tgtttccctctgttaacccaatcatcaacaattgacggtagggaccaaattcgctaacggccaaaaacgtggaggaccaaaaatttaataaaatttaagt 13086470  T
Q  216 aaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
      |||||||||||||||| ||||||||||||| | ||||||||||||||||||    
T  13086471 tgggactaatgttgaaaatgcgcctatttataggaaccttaaacataattaac 13086523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 168 - 268
Target Start/End: Complemental strand, 44208676 - 44208576
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaa 267  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||| ||||||||||||    
T  44208676 gctaacggaaaaaaacgttggggaccaaaaatttaataaaatttaagtagggactaatgttgaaaacgcgtctatttataaagacctaaaacataattaa 44208577  T
Q  268 c 268  Q
    |    
T  44208576 c 44208576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 168 - 268
Target Start/End: Original strand, 35061309 - 35061409
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaa 267  Q
    ||||||||  ||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  35061309 gctaacggaaaaaaacgtttgggatcaaaaatttaataaaatttaagtagggactaatgttgaaaacgcgcctatttatagggacctaaaacataattaa 35061408  T
Q  268 c 268  Q
    |    
T  35061409 c 35061409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 31318059 - 31318149
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||| |||||| |||||||||||||    
T  31318059 aaaaacgttggggaccaaaaatttaataaaatttaagtagggactaatgttagaaacgcgcctatttatagggacctaaaacataattaac 31318149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 168 - 268
Target Start/End: Complemental strand, 33688476 - 33688376
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaa 267  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||| |||||||||| |||||| ||||||||||||    
T  33688476 gctaacggaaaaaaacgttggggaccaaaaatttaataaaatttaagtaggaactaatgttggaaacgcacctatttatagggacctaaaacataattaa 33688377  T
Q  268 c 268  Q
    |    
T  33688376 c 33688376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 13085228 - 13085299
Alignment:
Q  16 attgagagaaaatctcgaataattttattgaataaaaaagtgtctcttatgctgcataatgttctgtttaaa 87  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  13085228 attgagagaaaatctcgaataattttattgaataaaaaagtgtctcttaggctgcataatgttctgtttaaa 13085299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 165 - 268
Target Start/End: Complemental strand, 53568957 - 53568854
Alignment:
Q  165 ttcgctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataat 264  Q
    |||||||||||  ||||| |||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||| | |||| |||||||||    
T  53568957 ttcgctaacgggaaaaaatgttggggaccaaaaatttaataaaatttaagtaaagattaatgttgaaaacacgcctatttataggaacctaaaacataat 53568858  T
Q  265 taac 268  Q
    ||||    
T  53568857 taac 53568854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 10322822 - 10322912
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||| |||||| |||||||||||||    
T  10322822 aaaaacattggggaccaaaaatttaataaaatttaagtagggactaatgttggaaactcgcctatttatagggacctaaaacataattaac 10322912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 35054975 - 35054885
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||| ||||||||| |||||| |||||||||||||    
T  35054975 aaaaacgttggggaccaaaaatttaataaaatttaagtaggaactaatgttgaaaatgcgtctatttatagggacctaaaacataattaac 35054885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 168 - 268
Target Start/End: Complemental strand, 31470763 - 31470663
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaa 267  Q
    ||||||||  ||||| || || ||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||| ||||||||||||    
T  31470763 gctaacggaaaaaaatgtcggagaccaaaaatttaataaaatttaagtagggactaatgttgaaaacatgcctatttataaggacctaaaacataattaa 31470664  T
Q  268 c 268  Q
    |    
T  31470663 c 31470663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 165 - 268
Target Start/End: Complemental strand, 15562732 - 15562630
Alignment:
Q  165 ttcgctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataat 264  Q
    ||||||||| |  ||||||||||||||||||||||| |||||| |||||||| |||||||||||| ||||||||||||||||| |||||| |||||||||    
T  15562732 ttcgctaacagaaaaaaacgttggggaccaaaaattcaataaa-tttaagtagggactaatgttggaaacgcgcctatttatagggacctaaaacataat 15562634  T
Q  265 taac 268  Q
    ||||    
T  15562633 taac 15562630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 44209988 - 44210078
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||| | |||||| ||||||    
T  44209988 aaaaacgttggggatcaaaaatttaataaaatttaagtaaagactaatgttaaaaacgcgcctatttatagggacgtaaaacatgattaac 44210078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 134 - 266
Target Start/End: Original strand, 25423145 - 25423276
Alignment:
Q  134 caatcatcaacaattgacggtagggaccaaattcgctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaa 233  Q
    ||||||||||||||| || |   ||||| | || ||||||||  |||||||||||| |||||||||||||||||||||||||| |||||||||||| |||    
T  25423145 caatcatcaacaattaacagcgaggacctattttgctaacggaaaaaaacgttggg-accaaaaatttaataaaatttaagtagggactaatgttggaaa 25423243  T
Q  234 cgcgcctatttataaggaccttaaacataatta 266  Q
    |||||||||||||| |  ||| |||||||||||    
T  25423244 cgcgcctatttataggatcctaaaacataatta 25423276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 177 - 268
Target Start/End: Original strand, 45046718 - 45046808
Alignment:
Q  177 caaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||| || ||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||| |||||||||| |||||||||    
T  45046718 caaaaacgt-ggagaccaaaaatttaataaaatttaagtagggactaatgttggaaacgcgtctatttatagggaccttaaagataattaac 45046808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 145 - 268
Target Start/End: Original strand, 40171370 - 40171493
Alignment:
Q  145 aattgacggtagggaccaaattcgctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctattt 244  Q
    ||||||||  ||| ||||||| | ||||| | ||||||  |||||||| |||||||||||||||||||||||  || |||||||| |||||| |||||||    
T  40171370 aattgacgacaggaaccaaatacactaacagacaaaaatattggggacaaaaaatttaataaaatttaagtagagattaatgttggaaacgcacctattt 40171469  T
Q  245 ataaggaccttaaacataattaac 268  Q
    |||  |||||||||||||||||||    
T  40171470 atagagaccttaaacataattaac 40171493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 168 - 268
Target Start/End: Complemental strand, 11669921 - 11669821
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaa 267  Q
    ||||||||  |||||||| | |||||||| |||||||||||||||| || |||||||||||| |||||||||| |||||| |||||| ||||| ||||||    
T  11669921 gctaacggaaaaaaacgtcgaggaccaaatatttaataaaatttaaatagggactaatgttggaaacgcgcctttttatagggacctaaaacacaattaa 11669822  T
Q  268 c 268  Q
    |    
T  11669821 c 11669821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 178 - 269
Target Start/End: Complemental strand, 25421855 - 25421765
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaact 269  Q
    ||||||||||||||  | |||||||||||||||||||||||||||  ||||||||| || ||||||||| ||||||| ||||||||||||||    
T  25421855 aaaaacgttggggataataaatttaataaaatttaagtaaggactgttgttgaaaatgcacctatttat-aggacctaaaacataattaact 25421765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 194 - 265
Target Start/End: Complemental strand, 31316313 - 31316242
Alignment:
Q  194 aaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataatt 265  Q
    ||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||| || ||||||||||    
T  31316313 aaaaatttaataaaatttaagtagggactaatgttggaaacgcacctatttataaggatctaaaacataatt 31316242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 179 - 268
Target Start/End: Complemental strand, 40170161 - 40170072
Alignment:
Q  179 aaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||||||||  ||||| ||||||||||||| || |||||||||||| ||||  |||||||| ||||||||| |||||||||||||    
T  40170161 aaaacgttggggactgaaaatataataaaatttaaatatggactaatgttggaaacaagcctatttgtaaggacctaaaacataattaac 40170072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 268
Target Start/End: Complemental strand, 53570811 - 53570709
Alignment:
Q  165 ttcgctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataat 264  Q
    |||||||||||  ||||| | |||||| || ||||||||||||||||||||| ||||||||||| ||||||  ||||||||| || |||| |||||||||    
T  53570811 ttcgctaacggaaaaaaatgatggggaacataaatttaataaaatttaagtatggactaatgttaaaaacgaacctatttat-agaacctaaaacataat 53570713  T
Q  265 taac 268  Q
    ||||    
T  53570712 taac 53570709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 269
Target Start/End: Original strand, 37329892 - 37329997
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgc----ctatttataaggaccttaaacataa 263  Q
    ||||||||  |||||||||||||||||||||||||| ||||| || ||| |||||||||||| |||| | |    ||||||||| |||||| ||||||||    
T  37329892 gctaacggaaaaaaacgttggggaccaaaaatttaacaaaatgtatgtagggactaatgttggaaacacacctatctatttatagggacctaaaacataa 37329991  T
Q  264 ttaact 269  Q
    ||||||    
T  37329992 ttaact 37329997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 268
Target Start/End: Complemental strand, 48738306 - 48738187
Alignment:
Q  149 gacggtagggaccaaattcgctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataa 248  Q
    ||||||| |||||||| |  | |||||  ||||||||||||||  |||||||||||||||||| |||| |||  |||||||||| | ||| ||||| ||     
T  48738306 gacggtaaggaccaaactttcaaacggaaaaaaacgttggggaagaaaaatttaataaaattttagtacggatcaatgttgaaagctcgcttatttgtag 48738207  T
Q  249 ggaccttaaacataattaac 268  Q
    ||||||||||||| ||||||    
T  48738206 ggaccttaaacatgattaac 48738187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 34513558 - 34513648
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||||||||  |||||||||||||||||| | || |||| ||||||| || | ||| ||||| || ||||||||||||||||||||    
T  34513558 aaaaacgttggggatgaaaaatttaataaaattttaatagggaccaatgttggaagctcgcttatttgtagggaccttaaacataattaac 34513648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 53572030 - 53572120
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||| || ||||| ||||||||||||||||||||||||  |||||||||| ||||| | |||||||||| | |||| ||| |||||||||    
T  53572030 aaaaatgtcggggatcaaaaatttaataaaatttaagtagagactaatgttaaaaacacacctatttataggaacctaaaatataattaac 53572120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 179 - 268
Target Start/End: Complemental strand, 13508635 - 13508547
Alignment:
Q  179 aaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||||||||  ||||||||||| |||||| |||| |||| |||||||||| | ||| ||||| | |||||||||||||||||||||    
T  13508635 aaaacgttggggatgaaaaatttaattaaattttagtagggaccaatgttgaaagctcgcttatttgt-aggaccttaaacataattaac 13508547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 268
Target Start/End: Complemental strand, 45045281 - 45045202
Alignment:
Q  189 ggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||| |||||| ||||||||||||| || |||||||||||| ||| |||| |||||||| | || |||||||||||||||    
T  45045281 ggactaaaaatataataaaatttaaatagggactaatgttggaaatgcgcatatttataggaactttaaacataattaac 45045202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 267
Target Start/End: Original strand, 25244123 - 25244196
Alignment:
Q  194 aaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaa 267  Q
    |||||||||||||||||||| || | | |||||||| ||||||||||||||||| ||||   ||||||||||||    
T  25244123 aaaaatttaataaaatttaaataggaattaatgttggaaacgcgcctatttatagggactcaaaacataattaa 25244196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 10321463 - 10321404
Alignment:
Q  209 tttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||| | |||||||||| ||||||||||||||||| ||| || |||||||||||||    
T  10321463 tttaagtaggaactaatgttggaaacgcgcctatttatagggatctaaaacataattaac 10321404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 44451855 - 44451764
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttata-aggaccttaaacataattaac 268  Q
    ||||| ||||||||  |||||||||||||||||||| || | || |||||||||||| ||  | ||||||  ||||||||||||||||||||    
T  44451855 aaaaatgttggggatgaaaaatttaataaaatttaaataggaaccaatgttgaaaactcgtttctttataggggaccttaaacataattaac 44451764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 28163003 - 28162913
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||||||||  |||||||||||||||||| | || |||  ||||||| || | ||| ||||| ||  |||||||||||||||||||    
T  28163003 aaaaacgttggggatgaaaaatttaataaaattttaatagggatcaatgttggaagctcgcttatttgtagagaccttaaacataattaac 28162913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 34512319 - 34512229
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||| |||||||  |||||||||||||||||| | || |||  |||||||||| | ||| ||||| || ||||||||||||||| ||||    
T  34512319 aaaaacattggggatgaaaaatttaataaaattttaatagggaacaatgttgaaagctcgcttatttgtagggaccttaaacataactaac 34512229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 2053156 - 2053214
Alignment:
Q  28 tctcgaataattttattgaataaaaaagtgtctcttatgctgcataatgttctgtttaaa 87  Q
    ||||||||||||||||||||| || |||| ||||||| ||||||||| ||| ||||||||    
T  2053156 tctcgaataattttattgaatgaataagtctctcttaggctgcataa-gttatgtttaaa 2053214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 205 - 268
Target Start/End: Original strand, 11671156 - 11671218
Alignment:
Q  205 aaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||||||  ||||||| ||||||||||||||| ||||| |||||| || ||||||||||    
T  11671156 aaaatttaagtagagactaattttgaaaacgcgccta-ttatagggacctaaatcataattaac 11671218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 268
Target Start/End: Original strand, 53569324 - 53569374
Alignment:
Q  218 ggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||||||| |||||| || ||||||| |||||| |||||||||||||    
T  53569324 ggactaatgttggaaacgctccgatttatagggacctaaaacataattaac 53569374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 203
Target Start/End: Original strand, 11671095 - 11671164
Alignment:
Q  134 caatcatcaacaattgacggtagggaccaaattcgctaacggccaaaaacgttggggaccaaaaatttaa 203  Q
    ||||||||||||||| || |   ||||| | |||||||||||  ||||| ||||||||||||||||||||    
T  11671095 caatcatcaacaattaacagcgaggacctatttcgctaacggaaaaaaatgttggggaccaaaaatttaa 11671164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 6659466 - 6659506
Alignment:
Q  16 attgagagaaaatctcgaataattttattgaataaaaaagt 56  Q
    ||||||||||||||||||||| ||||| ||||| |||||||    
T  6659466 attgagagaaaatctcgaatagttttagtgaatcaaaaagt 6659506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 107; Significance: 1e-53; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 118 - 268
Target Start/End: Original strand, 38875003 - 38875153
Alignment:
Q  118 tttgcctccgttaacccaatcatcaacaattgacggtagggaccaaattcgctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaa 217  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||     
T  38875003 tttgcttccgttaacccaatcaacaacaattgacggtagggaccaaattcactaacggtcaaaaacgttggggaccaaaaatttaataaaatttaagtag 38875102  T
Q  218 ggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
     ||||||||||| || | ||| |||||||| ||||||||||||||||||||    
T  38875103 agactaatgttggaagcacgcttatttatagggaccttaaacataattaac 38875153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 129 - 268
Target Start/End: Original strand, 43831904 - 43832043
Alignment:
Q  129 taacccaatcatcaacaattgacggtagggaccaaattcgctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgtt 228  Q
    ||||||||||| ||| ||||||||| ||||||||||| |  |||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  43831904 taacccaatcagcaaaaattgacggcagggaccaaatacattaacggacaaaaacgttggggacaaaaaatttaataaaatttaagtagggactaatgtt 43832003  T
Q  229 gaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||||||||||||||  |||||||||||||||||||    
T  43832004 gaaaacgcgcctatttatagagaccttaaacataattaac 43832043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 125 - 269
Target Start/End: Complemental strand, 43830796 - 43830652
Alignment:
Q  125 ccgttaacccaatcatcaacaattgacggtagggaccaaattcgctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaa 224  Q
    |||||| |||||||| ||| ||||||||| || ||| |||| || ||||||  |||||||||||||| |||||||||||||||||||||||| |||||||    
T  43830796 ccgttagcccaatcagcaaaaattgacggcagagactaaatacgttaacggataaaaacgttggggatcaaaaatttaataaaatttaagtagggactaa 43830697  T
Q  225 tgttgaaaacgcgcctatttataaggaccttaaacataattaact 269  Q
    |||||||||||| |||||||||| || ||||||||||||||||||    
T  43830696 tgttgaaaacgcacctatttataggggccttaaacataattaact 43830652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 125 - 268
Target Start/End: Complemental strand, 43308600 - 43308457
Alignment:
Q  125 ccgttaacccaatcatcaacaattgacggtagggaccaaattcgctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaa 224  Q
    |||||| |||||||| ||| |||| ||||||||||  |||| | ||||  |  ||||||||||||||||||||||||||||||||||||||  ||||| |    
T  43308600 ccgttagcccaatcagcaaaaattaacggtagggatgaaatacactaatagataaaaacgttggggaccaaaaatttaataaaatttaagttgggactga 43308501  T
Q  225 tgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||||| || ||||||||||||||||||||||||||||||    
T  43308500 tgttgaaaacacgtctatttataaggaccttaaacataattaac 43308457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 15131833 - 15131923
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||| |||| |||||||||||||| |||||||||||||    
T  15131833 aaaaatgttggggaccaaaaatttaataaaatttaagtaggaactaatgttgaaaacacgccgatttataaggacctaaaacataattaac 15131923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 46043458 - 46043368
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| | |||| |||||||||||||    
T  46043458 aaaaacgttggggaccaaaaatttaataaaatttaagtagggactaatgttggaaacgcgcatatttataggaacctaaaacataattaac 46043368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 168 - 268
Target Start/End: Complemental strand, 3495459 - 3495360
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaa 267  Q
    ||||||||  |||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| |||| ||||||||||||    
T  3495459 gctaacggaaaaaaacgtcggggaccaaaaatttaataaaatttaagtagggactaatgtt-aaaacgcgtctatttataagcacctaaaacataattaa 3495361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 268
Target Start/End: Complemental strand, 38873986 - 38873883
Alignment:
Q  155 agggaccaaattcgctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggacct 254  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||          ||| |||||||||||||||| ||||||||||||| ||||||    
T  38873986 agggaccaaattcgctgacggccaaaaacgttggggaccaaaaatttaa----------gtagggactaatgttgaaaatgcgcctatttatagggacct 38873897  T
Q  255 taaacataattaac 268  Q
    ||||||||||||||    
T  38873896 taaacataattaac 38873883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 178 - 267
Target Start/End: Complemental strand, 33624576 - 33624487
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaa 267  Q
    ||||| |||||||| |||||||||||||||||||||||| | ||||||||| |||||||||||||||||| |||||| ||||||||||||    
T  33624576 aaaaaagttggggatcaaaaatttaataaaatttaagtaggaactaatgttaaaaacgcgcctatttatagggacctaaaacataattaa 33624487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 187 - 268
Target Start/End: Complemental strand, 45957888 - 45957807
Alignment:
Q  187 ggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||| |||||| |||||||||||||    
T  45957888 ggggaccaaaaatttaataaaatttaagtaggggctaatgttgaaaacacgcctatttatagggacctaaaacataattaac 45957807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 168 - 268
Target Start/End: Original strand, 33625900 - 33626000
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaa 267  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||| | ||||||| || |||| || ||||||||| |||||| ||||||||||||    
T  33625900 gctaacggaaaaaaacgttggggaccaaaaatttaataaaatttaagtaggaactaatgatggaaacacgtctatttatagggacctaaaacataattaa 33625999  T
Q  268 c 268  Q
    |    
T  33626000 c 33626000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 168 - 268
Target Start/End: Complemental strand, 38198863 - 38198763
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaa 267  Q
    ||||||||  |||||| | ||||||||||||||||||||||||||| || |||||||||||| |||| |||||||||||| |||||| ||||||||||||    
T  38198863 gctaacggaaaaaaacatcggggaccaaaaatttaataaaatttaaatagggactaatgttggaaacacgcctatttatagggacctaaaacataattaa 38198764  T
Q  268 c 268  Q
    |    
T  38198763 c 38198763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 168 - 268
Target Start/End: Original strand, 46044788 - 46044888
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaa 267  Q
    ||||||||  |||||| || |||| |||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||| |||| ||||||||||||    
T  46044788 gctaacggaaaaaaacattagggatcaaaaatttaataaaatttaagtagggactaatgttgaaaacacgcttatttataagaacctaaaacataattaa 46044887  T
Q  268 c 268  Q
    |    
T  46044888 c 46044888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 181 - 268
Target Start/End: Original strand, 38200076 - 38200163
Alignment:
Q  181 aacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||||||| | ||| |||||||||||| | |||||||||||||    
T  38200076 aacgtttgggaccaaaaatttaataaaatttaagtaatgactaatgttgaaaatgagcccatttataaggacttaaaacataattaac 38200163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 165 - 268
Target Start/End: Original strand, 3496673 - 3496774
Alignment:
Q  165 ttcgctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataat 264  Q
    |||||||||||  ||||||||||| |||||||||| ||||||||||||||||  | ||||||||||||||||||||||||||  | |||| |||||||||    
T  3496673 ttcgctaacgg--aaaaacgttggagaccaaaaatataataaaatttaagtagaggctaatgttgaaaacgcgcctatttattggaacctaaaacataat 3496770  T
Q  265 taac 268  Q
    ||||    
T  3496771 taac 3496774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 168 - 268
Target Start/End: Original strand, 43084332 - 43084432
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaa 267  Q
    ||||||||  |||||||  |||||||||||||||||||||||||||||| | |||||||||| |||| ||||||||||||  ||||| ||||||||||||    
T  43084332 gctaacggaaaaaaacgacggggaccaaaaatttaataaaatttaagtaggaactaatgttggaaacacgcctatttatagagacctaaaacataattaa 43084431  T
Q  268 c 268  Q
    |    
T  43084432 c 43084432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 46331871 - 46331960
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||| | ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||  ||||||| ||| |||||||||    
T  46331871 aaaaacgtttgagaccaaaaatttaataaaatttaagtagggactaatgttggaaacgcgcctattta-caggacctaaaatataattaac 46331960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 188 - 268
Target Start/End: Original strand, 43309630 - 43309710
Alignment:
Q  188 gggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||| ||||||||||||||||||||||||  || ||||||||||||| |||||||||||| ||||||||||||| ||||||    
T  43309630 gggatcaaaaatttaataaaatttaagtagagattaatgttgaaaacacgcctatttatagggaccttaaacatgattaac 43309710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 46330587 - 46330497
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||||||||  ||||||||||||||||||||||| |||||||||||| |||| |||||||| ||| ||| || || ||||||||||    
T  46330587 aaaaacgttggggataaaaaatttaataaaatttaagtagggactaatgttggaaacacgcctattcatatggaactaaatcataattaac 46330497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 178 - 267
Target Start/End: Complemental strand, 37107447 - 37107358
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaa 267  Q
    |||||||||||| |  |||||||||||||||||||| || |||| |||||| ||||| ||| |||||||| |||||||||||||||||||    
T  37107447 aaaaacgttgggaatgaaaaatttaataaaatttaaatagggaccaatgttaaaaactcgcttatttatagggaccttaaacataattaa 37107358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 5678347 - 5678418
Alignment:
Q  16 attgagagaaaa-tctcgaataattttattgaataaaaaagtgtctcttatgctgcataatgttctgtttaaa 87  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||    
T  5678347 attgagagaaaagtctcgaataattttattgaatgaaaaagtgtctcttaagctgcataa-gttctgtttaaa 5678418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 5703399 - 5703470
Alignment:
Q  16 attgagagaaaa-tctcgaataattttattgaataaaaaagtgtctcttatgctgcataatgttctgtttaaa 87  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||    
T  5703399 attgagagaaaagtctcgaataattttattgaatgaaaaagtgtctcttaagctgcataa-gttctgtttaaa 5703470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 268
Target Start/End: Complemental strand, 43083108 - 43083030
Alignment:
Q  189 ggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||||||||||||||||||||||  |||||||||| ||||| || |||||||| ||||||| |||||||||||||    
T  43083108 ggaccaaaaatttaataaaatttaagtagagactaatgttaaaaacacgtctatttat-aggacctaaaacataattaac 43083030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 44166935 - 44166844
Alignment:
Q  178 aaaaacgttggggaccaaaaa-tttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||||||| |||||||| |||||||||||||||||| ||| |||||||  |||||||||||||||| || |||| ||| |||||||||    
T  44166935 aaaaacgttgggaaccaaaaaatttaataaaatttaagtagggattaatgttagaaacgcgcctatttattagaacctaaaatataattaac 44166844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 45959164 - 45959254
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||||| || ||||| ||||||||||||||||||  ||||||||||| |||||  ||||||||||  ||||| |||||||||||||    
T  45959164 aaaaacgttggagatcaaaattttaataaaatttaagtagagactaatgttggaaacgaacctatttatagagacctaaaacataattaac 45959254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 178 - 241
Target Start/End: Original strand, 44168286 - 44168348
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgccta 241  Q
    |||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  44168286 aaaaacgttggg-atcaaaaatttaataaaatttaagtagggactaatgttgaaaacgcaccta 44168348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 8082782 - 8082872
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||||||||  |||||||||||||||||| | || |||| |||||||||| | ||| ||||| || ||| ||||||||||||||||    
T  8082782 aaaaacgttggggatgaaaaatttaataaaattttaatagggaccaatgttgaaagctcgcttatttgtagggatcttaaacataattaac 8082872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 13882822 - 13882870
Alignment:
Q  16 attgagagaaaatctcgaataattttattgaataaaaaagtgtctctta 64  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||    
T  13882822 attgagagaaaatctcaaataattttattgaatcaaaaagtgtctctta 13882870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 13886324 - 13886372
Alignment:
Q  16 attgagagaaaatctcgaataattttattgaataaaaaagtgtctctta 64  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||    
T  13886324 attgagagaaaatctcgaatgattttattgaatcaaaaagtgtctctta 13886372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 58
Target Start/End: Complemental strand, 4303403 - 4303361
Alignment:
Q  16 attgagagaaaatctcgaataattttattgaataaaaaagtgt 58  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  4303403 attgagagaaaatctcgaataattttattgaatcaaaaagtgt 4303361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 40303869 - 40303779
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||||||||  |||||||||||||||||||| || |||| ||||||| || |  || ||||| || | ||||||||||||||||||    
T  40303869 aaaaacgttggggatgaaaaatttaataaaatttaaatagggaccaatgttggaagcttgcttatttgtaggaaccttaaacataattaac 40303779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 8081577 - 8081487
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||| |||||||  |||||||||||||||||| | || |||| ||||||  || | ||| ||||| || ||||||||||||||||||||    
T  8081577 aaaaactttggggatgaaaaatttaataaaattttaatagggaccaatgtttgaagctcgcttatttgtagggaccttaaacataattaac 8081487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 268
Target Start/End: Original strand, 12622115 - 12622188
Alignment:
Q  194 aaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||||||||||||||| || |||| |||||||||| | ||| |||||||| ||| |||||| |||||||||    
T  12622115 aaaaatttaataaaatttaaatagggaccaatgttgaaagctcgcttatttataggga-cttaaagataattaac 12622188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 47110315 - 47110226
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||||||| || |||||||||  |||||||||||| ||| ||||||| |||||  |  |||||||| | ||||||||||||||||||    
T  47110315 aaaaacgttggg-actaaaaatttatgaaaatttaagtagggattaatgttcaaaacatgtttatttataggaaccttaaacataattaac 47110226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 58
Target Start/End: Complemental strand, 4300510 - 4300468
Alignment:
Q  16 attgagagaaaatctcgaataattttattgaataaaaaagtgt 58  Q
    |||||||||||||||| |||||||| ||||||| |||||||||    
T  4300510 attgagagaaaatctcaaataatttgattgaatcaaaaagtgt 4300468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 38595519 - 38595609
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||||||||  |||||||||||| ||||| | || |||  ||||||| || | | | ||||| || ||||||||||||||||||||    
T  38595519 aaaaacgttggggatgaaaaatttaatataattttaatagggatcaatgttggaagctcacttatttgtagggaccttaaacataattaac 38595609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 103; Significance: 3e-51; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 118 - 268
Target Start/End: Complemental strand, 42816167 - 42816017
Alignment:
Q  118 tttgcctccgttaacccaatcatcaacaattgacggtagggaccaaattcgctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaa 217  Q
    ||||| |||||| ||||||||| ||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||     
T  42816167 tttgcttccgttgacccaatcagcaacatttgatggtagggaccaaattcgctaacgaccaaaaacgttggggaccaaaaatttaataaaatttaagtag 42816068  T
Q  218 ggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||||||| || | ||| |||||||| ||||||||||||||||||||    
T  42816067 ggactaatgttggaagcacgcgtatttatagggaccttaaacataattaac 42816017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 127 - 268
Target Start/End: Complemental strand, 39308418 - 39308277
Alignment:
Q  127 gttaacccaatcatcaacaattgacggtagggaccaaattcgctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatg 226  Q
    |||| |||||||| ||| ||||||||| || ||| |||| |||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||| |    
T  39308418 gttagcccaatcagcaaaaattgacggcagagactaaatacgctaacggataaaaacgttggggaccaaaaatttaataaaatttaagtagggactaagg 39308319  T
Q  227 ttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||| || ||||||||| ||||||||||||||||||||    
T  39308318 ttgaaaacacgtctatttatagggaccttaaacataattaac 39308277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 37705925 - 37705835
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  37705925 aaaaacgttggggaccaaaaatttaataaaatttaagtagggactaatgttgaaaacgcgcctatttatagggacctaaaacataattaac 37705835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 129 - 268
Target Start/End: Original strand, 39310574 - 39310713
Alignment:
Q  129 taacccaatcatcaacaattgacggtagggaccaaattcgctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgtt 228  Q
    ||||||||||| ||| | ||||||| ||||||||||| |  |||| | |||||||||||||||||||||||| ||||||||||||||| | | |||||||    
T  39310574 taacccaatcagcaaaatttgacggcagggaccaaatacattaactgacaaaaacgttggggaccaaaaattaaataaaatttaagtaggaattaatgtt 39310673  T
Q  229 gaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||| |||||||| || ||||||||||||||||||||    
T  39310674 gaaaacgtgcctatttctagggaccttaaacataattaac 39310713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 165 - 268
Target Start/End: Complemental strand, 13322988 - 13322885
Alignment:
Q  165 ttcgctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataat 264  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||  ||||||||||| |||||| |||||||||    
T  13322988 ttcgctaacggaaaaaaacgttggggaccaaaaatttaataaaatttaagtagggactaatgttggaaacatgcctatttatagggacctaaaacataat 13322889  T
Q  265 taac 268  Q
    ||||    
T  13322888 taac 13322885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 165 - 268
Target Start/End: Original strand, 39338010 - 39338113
Alignment:
Q  165 ttcgctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataat 264  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||| ||| || |||||||||    
T  39338010 ttcgctaacggaaaaaaacgttggggaccaaaaatttaataaaatttaagtagggactaatgttggaaacacgcctatttatagggatctaaaacataat 39338109  T
Q  265 taac 268  Q
    ||||    
T  39338110 taac 39338113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 150 - 268
Target Start/End: Original strand, 42817184 - 42817301
Alignment:
Q  150 acggtagggaccaaattcgctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataag 249  Q
    |||| |||||||||||||||| ||| |||||||| |||||||| |||||||| ||||||| |||||| |||||||||||| |||| |||||||||||| |    
T  42817184 acggcagggaccaaattcgctgacg-ccaaaaacattggggacaaaaaatttcataaaatataagtagggactaatgttggaaacacgcctatttatagg 42817282  T
Q  250 gaccttaaacataattaac 268  Q
    |||||||||||||||||||    
T  42817283 gaccttaaacataattaac 42817301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 168 - 268
Target Start/End: Original strand, 13324045 - 13324145
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaa 267  Q
    ||||||||  |||||| ||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||| ||||||||||||    
T  13324045 gctaacggaaaaaaacattggggatcaaaaatttaataaaatttaagtagggactaatgttggaaacgcgcctatttatagggacctaaaacataattaa 13324144  T
Q  268 c 268  Q
    |    
T  13324145 c 13324145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 165 - 268
Target Start/End: Complemental strand, 1692690 - 1692587
Alignment:
Q  165 ttcgctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataat 264  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||  ||||| | |||||||    
T  1692690 ttcgctaacggaaaaaaacgttggggaccaaaaatttaataaaatttaagtagggactactgttgaaaacacgcctatttatagagacctaatacataat 1692591  T
Q  265 taac 268  Q
    ||||    
T  1692590 taac 1692587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 157 - 268
Target Start/End: Complemental strand, 14835130 - 14835020
Alignment:
Q  157 ggaccaaattcgctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggacctta 256  Q
    ||||||| |||||||||||| |||||||||||| |||||||||||| ||||||||||||| ||| |||| |||||||| ||| | |||||||||||||||    
T  14835130 ggaccaatttcgctaacggc-aaaaacgttgggaaccaaaaatttattaaaatttaagtagggattaatattgaaaacacgcttgtttataaggacctta 14835032  T
Q  257 aacataattaac 268  Q
    ||||||||||||    
T  14835031 aacataattaac 14835020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 36062593 - 36062502
Alignment:
Q  178 aaaaacgttgggg-accaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||||||| ||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  36062593 aaaaacgttgggggaccaaaaatttaataaaatttaaatagagactaatgttgaaaacgcgcctatttataaggacctaaaacataattaac 36062502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 169 - 268
Target Start/End: Original strand, 37707218 - 37707317
Alignment:
Q  169 ctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||  |||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||| |||||| |||||| |||||||||||||    
T  37707218 ctaacggaaaaaaacgttggggatcaaaaatttaataaaatttaagtagggactaatgttggaaacgcgcctgtttatagggacctaaaacataattaac 37707317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 168 - 267
Target Start/End: Original strand, 21136435 - 21136534
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaa 267  Q
    ||||||||  ||||||||| || |||||||||||||||||||||||||| |||||||||||| |||| |||||||||||| |||||| ||||||||||||    
T  21136435 gctaacggaaaaaaacgttaggaaccaaaaatttaataaaatttaagtagggactaatgttggaaacacgcctatttatagggacctaaaacataattaa 21136534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 21575599 - 21575509
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||| |||||||| |||||||||||||||||||||||| | |||||||||| ||||||| |||||||||||||||| |||||||||||||    
T  21575599 aaaaatgttggggatcaaaaatttaataaaatttaagtaggaactaatgttggaaacgcgtctatttataaggacctaaaacataattaac 21575509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 24451269 - 24451179
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||| |||| |||||||||||| |||||| ||| |||||||||    
T  24451269 aaaaacgttggggatcaaaaatttaataaaatttaagtagggactaatgttggaaacacgcctatttatagggacctaaaatataattaac 24451179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 168 - 269
Target Start/End: Original strand, 24452594 - 24452695
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaa 267  Q
    ||||||||  |||||||| |||||||||||| ||||||||||||||||| |||||||||||| |||| |||||||||||| |||| | ||||||||||||    
T  24452594 gctaacggaaaaaaacgtcggggaccaaaaaattaataaaatttaagtagggactaatgttggaaacacgcctatttatagggacttaaaacataattaa 24452693  T
Q  268 ct 269  Q
    ||    
T  24452694 ct 24452695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 168 - 268
Target Start/End: Complemental strand, 21135121 - 21135021
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaa 267  Q
    ||||||||  ||||||| |||||| |||||||||||||||||||||||  ||||||||||||||||| |||||||||||| |||||  ||||||||||||    
T  21135121 gctaacggaaaaaaacgatggggatcaaaaatttaataaaatttaagttgggactaatgttgaaaacacgcctatttatagggaccaaaaacataattaa 21135022  T
Q  268 c 268  Q
    |    
T  21135021 c 21135021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 168 - 268
Target Start/End: Complemental strand, 41280286 - 41280186
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaa 267  Q
    ||||||||  ||||||||||| ||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||| | | || ||||||||||||    
T  41280286 gctaacggaaaaaaacgttggagaccaaaaatttaataaaatttaagtaaatactaatgttggaaacgcgcctatttataggaatctaaaacataattaa 41280187  T
Q  268 c 268  Q
    |    
T  41280186 c 41280186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 16472781 - 16472691
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||| ||||||  |||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||| ||| |||||||||    
T  16472781 aaaaacattgggggtcaaaaatttaataaaatttaagtagggactaatgttggaaacgcgcctatttatagggacctaaaatataattaac 16472691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 16477352 - 16477262
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||| ||||||  |||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||| ||| |||||||||    
T  16477352 aaaaacattgggggtcaaaaatttaataaaatttaagtagggactaatgttggaaacgcgcctatttatagggacctaaaatataattaac 16477262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 168 - 268
Target Start/End: Complemental strand, 39336815 - 39336715
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaa 267  Q
    ||||||||  |||||||  | |||||||||||||||||||||||||||| || ||||||||| ||| ||||||||||||| |||||| ||||||||||||    
T  39336815 gctaacggaaaaaaacgccgaggaccaaaaatttaataaaatttaagtagggtctaatgttggaaatgcgcctatttatagggacctaaaacataattaa 39336716  T
Q  268 c 268  Q
    |    
T  39336715 c 39336715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 18180819 - 18180890
Alignment:
Q  16 attgagagaaaatctcgaataattttattgaataaaaaagtgtctcttatgctgcataatgttctgtttaaa 87  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||| ||| ||||||||||||||||||    
T  18180819 attgagagaaaatctcgaataattttattgaatcaaaaagtgcctcttaggctacataatgttctgtttaaa 18180890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 35368978 - 35368888
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||||| ||  ||||||||||||||||||||||| | ||||||||||||||| |||||||||||| | |||| |||||||||||||    
T  35368978 aaaaacgttggagataaaaaatttaataaaatttaagtaggtactaatgttgaaaacacgcctatttataggaacctaaaacataattaac 35368888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 199 - 268
Target Start/End: Original strand, 14840484 - 14840553
Alignment:
Q  199 tttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||| |||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  14840484 tttattaaaattttagtaaggactaatgttggaaacgcgcctatttgtaaggaccttaaacataattaac 14840553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 36063928 - 36064000
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataagga 251  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||    
T  36063928 aaaaacgttggggatcaaaaatttaataaaatttaagt-aggactaatgttggaaacgggcctatttataagga 36064000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 168 - 268
Target Start/End: Original strand, 35370184 - 35370282
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaa 267  Q
    ||||||||  |||||||||||| ||||||||||||||||| |||| ||| | ||||||||||||||| |||||||||||| |||||| ||||||||||||    
T  35370184 gctaacggaaaaaaacgttggg-accaaaaatttaataaa-tttatgtaggaactaatgttgaaaacacgcctatttatagggacctaaaacataattaa 35370281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 178 - 248
Target Start/End: Original strand, 16478608 - 16478678
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataa 248  Q
    ||||||||||| |||||| |||||||||||||||||||| |||||||||||  ||||||||||||||||||    
T  16478608 aaaaacgttggagaccaataatttaataaaatttaagtagggactaatgttagaaacgcgcctatttataa 16478678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 178 - 267
Target Start/End: Complemental strand, 32243446 - 32243357
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaa 267  Q
    ||||||||||||||  |||||||||||||||||||| || |||| |||||||||| | ||| ||||||||  ||||||||||||||||||    
T  32243446 aaaaacgttggggatgaaaaatttaataaaatttaaatagggaccaatgttgaaagctcgcttatttatagagaccttaaacataattaa 32243357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 35864164 - 35864254
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||||| ||||||||||||||||||||||||||| | |||||| || ||| | | |||||||||| ||| || |||||||||||||    
T  35864164 aaaaacgttggcgaccaaaaatttaataaaatttaagtaggaactaatattaaaagcacacctatttatagggatctaaaacataattaac 35864254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 45022053 - 45021963
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||||||||||||||||||||||||||||| | | |||||||| ||| || | | | |||||||| |||||| |||||||||||||    
T  45022053 aaaaacgttggggaccaaaaatttaataaaatttaggaagggactaatattggaagcacacgtatttatagggacctgaaacataattaac 45021963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 3865457 - 3865367
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||||||||  |||||||||||||||||||| |  |||| |||||||||| | ||| |||||||| | || |||||||||||||||    
T  3865457 aaaaacgttggggatgaaaaatttaataaaatttaaattgggaccaatgttgaaagctcgcttatttataggaactttaaacataattaac 3865367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 268
Target Start/End: Original strand, 22959746 - 22959863
Alignment:
Q  150 acggtagggaccaaattcgctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataag 249  Q
    |||||||||||||| || ||||||| | ||||| || | |||| ||||||||| |||| ||||| || | |||||||||  |||| || ||||||||| |    
T  22959746 acggtagggaccaattttgctaacgtc-aaaaatgtggaggactaaaaatttattaaattttaaataggaactaatgttagaaacacgtctatttatagg 22959844  T
Q  250 gaccttaaacataattaac 268  Q
    |||||||||||||||||||    
T  22959845 gaccttaaacataattaac 22959863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 54
Target Start/End: Original strand, 22512182 - 22512220
Alignment:
Q  16 attgagagaaaatctcgaataattttattgaataaaaaa 54  Q
    |||||||||||||||||||||||||||||||||||||||    
T  22512182 attgagagaaaatctcgaataattttattgaataaaaaa 22512220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 22926784 - 22926842
Alignment:
Q  16 attgagagaaaatctcgaataattttattgaataaaaaagtgtctcttatgctgcataa 74  Q
    ||||||||||||||||||||| ||||||||||| |||  |||||||||| |||||||||    
T  22926784 attgagagaaaatctcgaatatttttattgaattaaattgtgtctcttaggctgcataa 22926842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 44893624 - 44893534
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||| ||||  |||||||||||||||||| | || |||| ||||||| || | ||| ||||| || ||||||||||||||||||||    
T  44893624 aaaaacgttagggatgaaaaatttaataaaattttaatatggaccaatgttggaagctcgcttatttgtagggaccttaaacataattaac 44893534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 22921986 - 22922046
Alignment:
Q  16 attgagagaaaatctcgaataattttattgaataaaaa--agtgtctcttatgctgcataa 74  Q
    ||||||||||||||||||||||||||||||||| ||||   |||||||||| |||||||||    
T  22921986 attgagagaaaatctcgaataattttattgaatcaaaaggtgtgtctcttaggctgcataa 22922046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 26150643 - 26150572
Alignment:
Q  16 attgagagaaaa-tctcgaataattttattgaataaaaaagtgtctcttatgctgcataatgttctgtttaaa 87  Q
    |||||||||||| ||||||||| ||||||||||| |||||||| |||||| ||||||||| ||| ||||||||    
T  26150643 attgagagaaaagtctcgaatatttttattgaatgaaaaagtgcctcttaagctgcataa-gttttgtttaaa 26150572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 232
Target Start/End: Original strand, 3866888 - 3866942
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaa 232  Q
    ||||||||||||||  |||||||||||||||||||| || |||| ||||||||||    
T  3866888 aaaaacgttggggatgaaaaatttaataaaatttaaatagggaccaatgttgaaa 3866942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 42890347 - 42890309
Alignment:
Q  20 agagaaaatctcgaataattttattgaataaaaaagtgt 58  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  42890347 agagaaaatctcgaataattttattgaatcaaaaagtgt 42890309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 58
Target Start/End: Original strand, 42891800 - 42891842
Alignment:
Q  16 attgagagaaaatctcgaataattttattgaataaaaaagtgt 58  Q
    |||||||||||||||| |||||||||||||||| |||||||||    
T  42891800 attgagagaaaatctcaaataattttattgaatcaaaaagtgt 42891842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 49
Target Start/End: Original strand, 22520935 - 22520968
Alignment:
Q  16 attgagagaaaatctcgaataattttattgaata 49  Q
    ||||||||||||||||||||||||||||||||||    
T  22520935 attgagagaaaatctcgaataattttattgaata 22520968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 6845289 - 6845241
Alignment:
Q  16 attgagagaaaatctcgaataattttattgaataaaaaagtgtctctta 64  Q
    ||||||||||||||||||||| | ||| ||||| |||||||||||||||    
T  6845289 attgagagaaaatctcgaatattattaatgaatcaaaaagtgtctctta 6845241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 212
Target Start/End: Complemental strand, 35862838 - 35862794
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaattta 212  Q
    ||||||||  |||||||||||||| ||||||||||||||||||||    
T  35862838 gctaacggaaaaaaacgttggggatcaaaaatttaataaaattta 35862794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 30134055 - 30134145
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||| ||||||||  |||||||||||||||||| | ||  ||  |||||||||| | ||| ||||| || | ||||||||||||||||||    
T  30134055 aaaaatgttggggatgaaaaatttaataaaattttaatagagatcaatgttgaaagctcgcttatttgtaggaaccttaaacataattaac 30134145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 32244923 - 32245013
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||||| |||  |||||||||||||||||||| || |||  ||| ||| || | ||  |||||||||| || |||||||||||||||    
T  32244923 aaaaacgttgaggatgaaaaatttaataaaatttaaatagggatcaatattggaagctcgtttatttataagaactttaaacataattaac 32245013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 230 - 268
Target Start/End: Complemental strand, 35862708 - 35862670
Alignment:
Q  230 aaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||||||||||||| |||||| |||||||||||||    
T  35862708 aaaacgcgcctatttatagggacctaaaacataattaac 35862670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 2e-36; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 135 - 268
Target Start/End: Original strand, 7855350 - 7855483
Alignment:
Q  135 aatcatcaacaattgacggtagggaccaaattcgctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaac 234  Q
    ||||| ||||| || |||||  ||||||| || || |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  7855350 aatcagcaacatttcacggtgaggaccaattttgcaaacggcaaaaaacgttggggaccaaaaatttaataaaatttaagtagggactaatgttgaaaac 7855449  T
Q  235 gcgcctatttataaggaccttaaacataattaac 268  Q
     |||||||||||| |||| | |||||||||||||    
T  7855450 acgcctatttatagggacttaaaacataattaac 7855483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 15119345 - 15119435
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| | |||||||||| ||||||||||||||||||||    
T  15119345 aaaaacgttggggaccaaaaatttaataaaatttaagtagggactaatgttggaaacacacctatttatagggaccttaaacataattaac 15119435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 188 - 268
Target Start/End: Complemental strand, 7852329 - 7852249
Alignment:
Q  188 gggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||| |||||| |||||||||||||    
T  7852329 gggaccaaaaatttaataaaatttaagtagggattaatgttgaaaacacgcctatttatagggacctaaaacataattaac 7852249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 178 - 269
Target Start/End: Original strand, 22972290 - 22972381
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaact 269  Q
    |||| ||||||| ||||||||||||||||||| |||||| |||||||| |||||||| |||||||||||||| |||| ||||||||||||||    
T  22972290 aaaagcgttgggaaccaaaaatttaataaaatataagtagggactaatattgaaaacacgcctatttataagaacctaaaacataattaact 22972381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 178 - 269
Target Start/End: Complemental strand, 23816108 - 23816017
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaact 269  Q
    |||| ||||||| ||||||||||||||||||| |||||| |||||||| |||||||| |||||||||||||| |||| ||||||||||||||    
T  23816108 aaaagcgttgggaaccaaaaatttaataaaatataagtagggactaatattgaaaacacgcctatttataagaacctaaaacataattaact 23816017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 179 - 268
Target Start/End: Complemental strand, 22971683 - 22971594
Alignment:
Q  179 aaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||||||||  ||||||||||||||||||||||| ||||| |||||| ||||||||||||||||| ||| || |||||||||||||    
T  22971683 aaaacgttggggataaaaaatttaataaaatttaagtagggactgatgttggaaacgcgcctatttatagggatctaaaacataattaac 22971594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 179 - 268
Target Start/End: Original strand, 23816715 - 23816804
Alignment:
Q  179 aaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||||||||  ||||||||||||||||||||||| ||||| |||||| ||||||||||||||||| ||| || |||||||||||||    
T  23816715 aaaacgttggggataaaaaatttaataaaatttaagtagggactgatgttggaaacgcgcctatttatagggatctaaaacataattaac 23816804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 11190452 - 11190381
Alignment:
Q  16 attgagagaaaatctcgaataattttattgaataaaaaagtgtctcttatgctgcataatgttctgtttaaa 87  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||| ||| ||||||||||||||||||    
T  11190452 attgagagaaaatctcgaataattttattgaatcaaaaagtgtcttttaagctacataatgttctgtttaaa 11190381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 181 - 268
Target Start/End: Original strand, 17246588 - 17246675
Alignment:
Q  181 aacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||  |||| ||||||||||||  ||||| |||||||||||||    
T  17246588 aacgttggggaccaaaaatttaataaaatttaagtagggactattgttagaaacacgcctatttatagagacctaaaacataattaac 17246675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 178 - 252
Target Start/End: Complemental strand, 8230991 - 8230917
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggac 252  Q
    |||||||||||||| |||||||||||||||||||||||| | |  |||||| |||||||||||||||||||||||    
T  8230991 aaaaacgttggggatcaaaaatttaataaaatttaagtaggaaaaaatgttcaaaacgcgcctatttataaggac 8230917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 5086948 - 5087037
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||||||||  ||||||||||||||||||||  |||||| ||||||| || | ||| |||||||| ||||||||||||||||||||    
T  5086948 aaaaacgttggggatgaaaaatttaataaaatttaaa-aaggacgaatgttggaagctcgcttatttatagggaccttaaacataattaac 5087037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 134 - 267
Target Start/End: Original strand, 3335629 - 3335761
Alignment:
Q  134 caatcatcaacaattgacggtagggaccaaattcgctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaa 233  Q
    |||||| |||||||| || | | ||||| | || ||||||||  |||||||||||||| ||||| |||||||||||||| ||| ||| |||||||| |||    
T  3335629 caatcagcaacaattaacagcaaggacctattttgctaacggaaaaaaacgttggggatcaaaa-tttaataaaatttatgtagggagtaatgttggaaa 3335727  T
Q  234 cgcgcctatttataaggaccttaaacataattaa 267  Q
    | |||||||||||| | |||| || |||||||||    
T  3335728 cacgcctatttataggaacctaaagcataattaa 3335761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 178 - 269
Target Start/End: Original strand, 5080012 - 5080102
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaact 269  Q
    |||||||| ||||||||||||||||||||||||||| || | |||||| ||| |||| |  |||||||| ||||||| ||||||||||||||    
T  5080012 aaaaacgtcggggaccaaaaatttaataaaatttaaataggaactaatattggaaacacatctatttat-aggacctaaaacataattaact 5080102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 26571103 - 26571044
Alignment:
Q  16 attgagagaaaatctcgaataattttattgaataaaaaagtgtctcttatgctgcataat 75  Q
    ||||||||||||||||||||||||||||||||| || ||||| |||||| ||||||||||    
T  26571103 attgagagaaaatctcgaataattttattgaatgaataagtggctcttaggctgcataat 26571044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 268
Target Start/End: Original strand, 18503473 - 18503565
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaa 267  Q
    ||||||||  |||||||| ||||||||||||||||||||||||||| ||  ||      ||||||||||||||||||||||| |||| ||||||||||||    
T  18503473 gctaacggaaaaaaacgtcggggaccaaaaatttaataaaatttaaata--ga------ttgaaaacgcgcctatttataagaacctaaaacataattaa 18503564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 21108591 - 21108681
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||| ||||||||  |||||||||||||||||| |||| |||| ||||||| || | ||| ||||| || | ||||||||||||||||||    
T  21108591 aaaaatgttggggatgaaaaatttaataaaattttagtagggaccaatgttggaagctcgcttatttgtaggaaccttaaacataattaac 21108681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 229
Target Start/End: Complemental strand, 5078787 - 5078736
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttg 229  Q
    ||||||||| ||||| ||||||||||||||||||| ||| ||||||||||||    
T  5078787 aaaaacgttcgggactaaaaatttaataaaatttatgtagggactaatgttg 5078736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 30052156 - 30052096
Alignment:
Q  16 attgagagaaaatctcgaataattttattgaataaaaaa--gtgtctcttatgctgcataa 74  Q
    ||||||||||||||||||||| | ||| |||||||||||  |||||||||| |||||||||    
T  30052156 attgagagaaaatctcgaatattattaatgaataaaaaagtgtgtctcttaagctgcataa 30052096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 289885 - 289974
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||||| ||  |||||||||||||||||||| || |||| |||||| ||  | ||| ||||||| || ||||||||||||| ||||    
T  289885 aaaaacgttggagataaaaaatttaataaaatttaaatagggaccaatgttaaatgctcgcttatttat-agaaccttaaacataactaac 289974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 3535987 - 3535929
Alignment:
Q  16 attgagagaaaatctcgaataattttattgaataaaaaagtgtctcttatgctgcataa 74  Q
    ||||||||||||||||||||| | ||| |||||||||  ||| |||||| |||||||||    
T  3535987 attgagagaaaatctcgaatattattaatgaataaaagtgtgcctcttaggctgcataa 3535929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 3542198 - 3542140
Alignment:
Q  16 attgagagaaaatctcgaataattttattgaataaaaaagtgtctcttatgctgcataa 74  Q
    ||||||||||||||||||||| | ||| |||||||||  ||| |||||| |||||||||    
T  3542198 attgagagaaaatctcgaatattattaatgaataaaagtgtgcctcttaggctgcataa 3542140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 268
Target Start/End: Complemental strand, 3913013 - 3912939
Alignment:
Q  194 aaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||||||||||||||| || |||| ||| || ||||  ||| ||||| || ||| ||||||||||||||||    
T  3913013 aaaaatttaataaaatttaaatagggaccaatattaaaaatccgcttatttgtagggagcttaaacataattaac 3912939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 3914982 - 3915072
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||| |||||||||  ||||||||||||||||| || || ||||||||| || || |  |  ||||| || ||||||||||||||||||||    
T  3914982 aaaatcgttggggatgaaaaatttaataaaattaaaatagggactaatgatggaagcttgtttatttgtagggaccttaaacataattaac 3915072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 58
Target Start/End: Complemental strand, 30049869 - 30049827
Alignment:
Q  16 attgagagaaaatctcgaataattttattgaataaaaaagtgt 58  Q
    ||||||||||||||||||||| | ||| |||||||||||||||    
T  30049869 attgagagaaaatctcgaatattattaatgaataaaaaagtgt 30049827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 2e-36; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 135 - 268
Target Start/End: Original strand, 23317997 - 23318130
Alignment:
Q  135 aatcatcaacaattgacggtagggaccaaattcgctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaac 234  Q
    |||||| |||| || |||||  ||||||| || || |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  23317997 aatcattaacatttcacggtgaggaccaagtttgcaaacggcaaaaaacgttggggaccaaaaatttaataaaatttaagtagggactaatgttggaaac 23318096  T
Q  235 gcgcctatttataaggaccttaaacataattaac 268  Q
     |||||||||||| |||||| |||||||||||||    
T  23318097 acgcctatttatagggacctaaaacataattaac 23318130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 134 - 268
Target Start/End: Original strand, 41140081 - 41140215
Alignment:
Q  134 caatcatcaacaattgacggtagggaccaaattcgctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaa 233  Q
    |||||| |||||||| || || || ||| | || ||||||||  |||||| |||||||||||||||||||||||||||||||| |||||||||||| |||    
T  41140081 caatcagcaacaattaacagtgggaacctattttgctaacggaaaaaaacattggggaccaaaaatttaataaaatttaagtagggactaatgttggaaa 41140180  T
Q  234 cgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||||||||| |||||| |||||||||||||    
T  41140181 cgcgcctatttatagggacctaaaacataattaac 41140215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 168 - 268
Target Start/End: Original strand, 13921147 - 13921247
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaa 267  Q
    ||||||||  |||||| ||||||||||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  13921147 gctaacggaaaaaaacattggggaccaaaaatttaataaaatttaaatagggactaatgttggaaacgcgcctatttataaggacctaaaacataattaa 13921246  T
Q  268 c 268  Q
    |    
T  13921247 c 13921247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 165 - 267
Target Start/End: Complemental strand, 26865035 - 26864933
Alignment:
Q  165 ttcgctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataat 264  Q
    |||||||||||  ||||||||||||||||||||||| ||||||||||||||| |||||||||||  |||||||| |||||||| |||||| |||||||||    
T  26865035 ttcgctaacggaaaaaaacgttggggaccaaaaattgaataaaatttaagtagggactaatgttagaaacgcgcttatttatagggacctaaaacataat 26864936  T
Q  265 taa 267  Q
    |||    
T  26864935 taa 26864933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 41138817 - 41138727
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||| |||||| |||||||||||||    
T  41138817 aaaaacattggggaccaaaaatttaataaaatttaagtagggactaatgttggagacgcgcctatttatagggacctaaaacataattaac 41138727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 168 - 268
Target Start/End: Original strand, 26866172 - 26866272
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaa 267  Q
    ||||||||  |||||||| ||||| |||||||||||||||||||||||| |||||||||||| |||| |||||||||||| |||||| ||||||||||||    
T  26866172 gctaacggaaaaaaacgtcggggagcaaaaatttaataaaatttaagtagggactaatgttggaaacacgcctatttatagggacctaaaacataattaa 26866271  T
Q  268 c 268  Q
    |    
T  26866272 c 26866272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 168 - 267
Target Start/End: Original strand, 18951138 - 18951237
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaa 267  Q
    ||||||||  ||||| |||||||| |||||||||||||||||||||||| |||||||||||| |||| ||| ||||||||||||||| ||||||||||||    
T  18951138 gctaacggaaaaaaatgttggggatcaaaaatttaataaaatttaagtagggactaatgttggaaacacgcttatttataaggacctaaaacataattaa 18951237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 43440040 - 43439950
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||| |||||| ||| |||||||||    
T  43440040 aaaaaggttggggaccaaaaatttaataaaatttaagtaggaactaatgttgaaaacacgcctatttatagggacctaaaagataattaac 43439950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 171 - 269
Target Start/End: Complemental strand, 23312755 - 23312657
Alignment:
Q  171 aacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaact 269  Q
    |||||| |||||  |||||||||||||||||||||||||||||||| | | |||||||| |||| |||||||||||| |||||| ||||||||||||||    
T  23312755 aacggcaaaaaatattggggaccaaaaatttaataaaatttaagtaggaattaatgttggaaacacgcctatttatagggacctaaaacataattaact 23312657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 28381317 - 28381407
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||| || |||||||||||||  |||||||||||||| |||||||| || ||||||||| ||||||||||||||| |||||||||||||    
T  28381317 aaaaactttagggaccaaaaattatataaaatttaagtatggactaatattaaaaacgcgcatatttataaggacctaaaacataattaac 28381407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 179 - 268
Target Start/End: Complemental strand, 20898536 - 20898447
Alignment:
Q  179 aaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||||||||||||||||||||| |||||||||  || ||||||||| |||| | |||| ||||| ||||||||||||||||||||    
T  20898536 aaaacgttggggaccaaaaatttaatacaatttaagttggggctaatgttggaaacacacctaattatagggaccttaaacataattaac 20898447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 134 - 268
Target Start/End: Original strand, 38693899 - 38694033
Alignment:
Q  134 caatcatcaacaattgacggtagggaccaaattcgctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaa 233  Q
    |||||| |||||||| || ||  ||||| | || ||||||||  ||||| || ||||| |||||||||||||||||||||||  ||| |||| ||| |||    
T  38693899 caatcaacaacaattaacagtgaggacctattttgctaacggaaaaaaatgtaggggatcaaaaatttaataaaatttaagtggggattaatattggaaa 38693998  T
Q  234 cgcgcctatttataaggaccttaaacataattaac 268  Q
    | |||||||||||| |||||| |||||||||||||    
T  38693999 cacgcctatttatagggacctaaaacataattaac 38694033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 147 - 268
Target Start/End: Complemental strand, 37812084 - 37811963
Alignment:
Q  147 ttgacggtagggaccaaattcgctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttat 246  Q
    ||||||||| |||||||| |  | |||||  ||||||||||||||  |||||||||||||||||| |||| |||| ||||||| || | ||| ||||| |    
T  37812084 ttgacggtaaggaccaaacttacaaacggaaaaaaacgttggggatgaaaaatttaataaaattttagtagggaccaatgttggaagctcgcttatttgt 37811985  T
Q  247 aaggaccttaaacataattaac 268  Q
    | ||||||||||||||||||||    
T  37811984 agggaccttaaacataattaac 37811963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 188 - 268
Target Start/End: Original strand, 43441375 - 43441454
Alignment:
Q  188 gggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||  |||| ||||||||||||||    
T  43441375 gggaccaaaaatttaataaaatttaagtagagactaatgttgaaaacacgcctatttttagagacc-taaacataattaac 43441454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 8218504 - 8218595
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggact-aatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||| ||||||| |||| | ||||||||||  ||||| ||| |||||||||    
T  8218504 aaaaacgttggggaccaaaaacttaataaaatttaagtagggactaaatgttggaaacacacctatttatagagacctaaaatataattaac 8218595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 268
Target Start/End: Original strand, 34527593 - 34527695
Alignment:
Q  165 ttcgctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataat 264  Q
    |||||||||||  |||||| ||||| |||||||||||||||||||||||||| | | |||||||| |||| ||||||||||||  || || |||||||||    
T  34527593 ttcgctaacggaaaaaaacattggg-accaaaaatttaataaaatttaagtaggaattaatgttggaaacacgcctatttatagagatctaaaacataat 34527691  T
Q  265 taac 268  Q
    ||||    
T  34527692 taac 34527695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 42258414 - 42258504
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||||||||  |||||||||||||||||| ||||||| | ||||||| || | ||| |||||||| | ||||||||||||||||||    
T  42258414 aaaaacgttggggatgaaaaatttaataaaattttagtaaggtccaatgttggaagctcgcttatttataggaaccttaaacataattaac 42258504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 147 - 268
Target Start/End: Original strand, 3407384 - 3407504
Alignment:
Q  147 ttgacggtagggaccaaattcgctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttat 246  Q
    ||||||||| |||||||| |  | |||||  |||||||||||| |  |||||||||||||||||| |||| |||| |||||||||| | ||| ||||| |    
T  3407384 ttgacggtaaggaccaaacttacaaacggaaaaaaacgttggg-atgaaaaatttaataaaattttagtagggaccaatgttgaaagctcgcttatttgt 3407482  T
Q  247 aaggaccttaaacataattaac 268  Q
    | ||||||||||||||||||||    
T  3407483 agggaccttaaacataattaac 3407504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 268
Target Start/End: Complemental strand, 8217316 - 8217217
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaa 267  Q
    ||||||||  |||||||||||| |||||||||||||||||||||| ||  || ||||||||| |||| | |||||||||| | |||| ||||||||||||    
T  8217316 gctaacggaaaaaaacgttggg-accaaaaatttaataaaatttatgttggggctaatgttggaaacacacctatttataggaacctaaaacataattaa 8217218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 188 - 264
Target Start/End: Complemental strand, 34526803 - 34526727
Alignment:
Q  188 gggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataat 264  Q
    |||||||||||||||||||||||||||||   | |||||||| |||| |||||||||||| |||||| |||||||||    
T  34526803 gggaccaaaaatttaataaaatttaagtagaaattaatgttggaaacacgcctatttatagggacctaaaacataat 34526727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 245
Target Start/End: Complemental strand, 19116940 - 19116882
Alignment:
Q  187 ggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctattta 245  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||| || ||||||||    
T  19116940 ggggaccaaaaatttaataaaatttaagtagggactaatattgaaaatgcacctattta 19116882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 178 - 267
Target Start/End: Complemental strand, 38691779 - 38691690
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaa 267  Q
    |||||| |||||||||||| ||||||||||||||||||| ||| |||||||  |||  ||||||| ||||  ||||| ||||||||||||    
T  38691779 aaaaacattggggaccaaatatttaataaaatttaagtagggattaatgttagaaaaacgcctatatatagagacctaaaacataattaa 38691690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 19497410 - 19497480
Alignment:
Q  16 attgagagaaaatctcgaataattttattgaataaaaaagtgtctcttatgctgcataatgttctgtttaaa 87  Q
    ||||||| |||||||| || ||| ||||||||| |||||||| |||||| ||||||||||||||||||||||    
T  19497410 attgagaaaaaatctctaa-aatattattgaatcaaaaagtgcctcttaggctgcataatgttctgtttaaa 19497480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 58
Target Start/End: Original strand, 21849107 - 21849149
Alignment:
Q  16 attgagagaaaatctcgaataattttattgaataaaaaagtgt 58  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  21849107 attgagagaaaatctcgaataattttattgaatcaaaaagtgt 21849149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 58
Target Start/End: Original strand, 40778922 - 40778964
Alignment:
Q  16 attgagagaaaatctcgaataattttattgaataaaaaagtgt 58  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  40778922 attgagagaaaatctcgaataattttattgaatcaaaaagtgt 40778964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 248
Target Start/End: Complemental strand, 13919851 - 13919781
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataa 248  Q
    |||||||||||  | |||||||| ||||||||||||||  | ||||| |||| ||||||||||||||||||    
T  13919851 aaaaacgttggaaatcaaaaattcaataaaatttaagtgggaactaacgttggaaacgcgcctatttataa 13919781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 203 - 238
Target Start/End: Complemental strand, 28381122 - 28381087
Alignment:
Q  203 ataaaatttaagtaaggactaatgttgaaaacgcgc 238  Q
    |||||||||||||| |||||||||||||||||||||    
T  28381122 ataaaatttaagtagggactaatgttgaaaacgcgc 28381087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 37813249 - 37813339
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||| ||||  |||||||||||||||||| | || | |  ||||||| || | ||| ||||| |||||| ||||||||||||||||    
T  37813249 aaaaacgttagggatgaaaaatttaataaaattttaataggaaacaatgttggaagctcgcttatttgtaaggatcttaaacataattaac 37813339  T

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Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 40272226 - 40272136
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||||| |||  |||||||||||||||||||| || |||  ||||||| || | |   |||||||||| || |||||||||||||||    
T  40272226 aaaaacgttgaggatgaaaaatttaataaaatttaaatagggatcaatgttggaagctcatttatttataagaactttaaacataattaac 40272136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 268
Target Start/End: Complemental strand, 9168531 - 9168467
Alignment:
Q  204 taaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||||| || |||| ||||||| || | ||| |||||||| |||| |||||||||||||||    
T  9168531 taaaatttaaatagggaccaatgttggaagctcgcttatttatagggactttaaacataattaac 9168467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 73; Significance: 2e-33; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 168 - 268
Target Start/End: Complemental strand, 15053447 - 15053347
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaa 267  Q
    ||||||||  |||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  15053447 gctaacggaaaaaaacgtcggggaccaaatatttaataaaatttaagtagggactaatgttgaaaacgcgcctatttatagggacctaaaacataattaa 15053348  T
Q  268 c 268  Q
    |    
T  15053347 c 15053347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 12368715 - 12368805
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||| |||||||||||||    
T  12368715 aaaaacgttagggaccaaaaatttaataaaatttaagtagggactaatgttggaaacgcgcctatttatagggacctaaaacataattaac 12368805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 37987198 - 37987288
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||| |||||||||||||    
T  37987198 aaaaacgtcggggaccaaaaatttaataaaatttaagtagggactaatgttggaaacgcgcctatttatagggacctaaaacataattaac 37987288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 168 - 268
Target Start/End: Complemental strand, 36248134 - 36248034
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaa 267  Q
    ||||||||  |||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||| |||||| ||||||||||||    
T  36248134 gctaacggaaaaaaacgtcggggaccaaaaatttaataaaatttaagtagggactaatgttggaaacgcgtctatttatagggacctaaaacataattaa 36248035  T
Q  268 c 268  Q
    |    
T  36248034 c 36248034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 33708110 - 33708020
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||| | |||| |||||||||||||    
T  33708110 aaaaacgttggggaccaaaaatttaataaaatttaagtatggactaatgttggaaacgtgcctatttataggaacctaaaacataattaac 33708020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 36368398 - 36368488
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||| |||||||| |||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||| |||||||||||||    
T  36368398 aaaaatgttggggatcaaaaatttaataaaatttaagtagggactaaggttggaaacgcgcctatttataaggacctaaaacataattaac 36368488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 168 - 254
Target Start/End: Complemental strand, 46595954 - 46595868
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggacct 254  Q
    ||||||||  ||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||    
T  46595954 gctaacggaaaaaaacgttggggacaaaaaatttaataaaatttaagtagggactaacgttgaaaacgcgcctatttatagggacct 46595868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 168 - 268
Target Start/End: Complemental strand, 30981550 - 30981451
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaa 267  Q
    ||||||||  |||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||| |||  |||||| ||||||||||||    
T  30981550 gctaacggaaaaaaacgttggg-accaaaaatttaataaaatttaagtagggactaatgttggaaacgcgcctatatatcgggacctaaaacataattaa 30981452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 168 - 268
Target Start/End: Original strand, 33709440 - 33709540
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaa 267  Q
    ||||||||  |||||||||||||| |||||||||||||||||||||||| |||||||| ||  |||| |||||||||||| |||||| ||||||||||||    
T  33709440 gctaacggaaaaaaacgttggggatcaaaaatttaataaaatttaagtagggactaatattagaaacacgcctatttatagggacctaaaacataattaa 33709539  T
Q  268 c 268  Q
    |    
T  33709540 c 33709540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 168 - 268
Target Start/End: Original strand, 36249354 - 36249453
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaa 267  Q
    ||||||||  ||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| | || | ||||||||||||    
T  36249354 gctaacggaaaaaaacgtttgggaccaaaa-tttaataaaatttaagtagggactaatgttgaaaacgcgcctatttataggaacttaaaacataattaa 36249452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 178 - 265
Target Start/End: Original strand, 21795897 - 21795984
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataatt 265  Q
    |||||| |||||||||||||||||||||||||||||||| ||||| |||||| |||| || ||||||||| |||||||||||||||||    
T  21795897 aaaaacattggggaccaaaaatttaataaaatttaagtagggactgatgttgtaaacacgtctatttatagggaccttaaacataatt 21795984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 165 - 268
Target Start/End: Original strand, 29232136 - 29232239
Alignment:
Q  165 ttcgctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataat 264  Q
    |||||||||||  |||| ||||||| |||||||||||||||||||||||||| ||| |||||||| |||  |||||||||||| |||||| |||||||||    
T  29232136 ttcgctaacggaaaaaaccgttgggaaccaaaaatttaataaaatttaagtagggattaatgttggaaatacgcctatttatagggacctaaaacataat 29232235  T
Q  265 taac 268  Q
    ||||    
T  29232236 taac 29232239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 165 - 268
Target Start/End: Original strand, 15054684 - 15054787
Alignment:
Q  165 ttcgctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataat 264  Q
    |||||||||||  |||||| ||||||||||||||||||||||||||| |||| | |||||||||| |||| | |||||||||| |||| | |||||||||    
T  15054684 ttcgctaacggaaaaaaacattggggaccaaaaatttaataaaattttagtaggtactaatgttggaaacacacctatttatagggacttaaaacataat 15054783  T
Q  265 taac 268  Q
    ||||    
T  15054784 taac 15054787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 178 - 237
Target Start/End: Complemental strand, 29231128 - 29231069
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcg 237  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  29231128 aaaaacgtcggggaccaaaaatttaataaaatttaagtaaggactaatgttggaaacgcg 29231069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 534117 - 534207
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||| |||| ||||||||||||||||||||| || | ||||||||||||||| |||||||||||   ||||| |||||||||||||    
T  534117 aaaaacgttcgggatcaaaaatttaataaaatttaaataggaactaatgttgaaaacacgcctatttattgagacctaaaacataattaac 534207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 21794869 - 21794780
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||| |||||||||||||||||||||||||||||||| ||  |||||||| |||| || ||||||| | ||||||||||||||||||||    
T  21794869 aaaaacattggggaccaaaaatttaataaaatttaagtaggggttaatgttggaaacacggctattta-agggaccttaaacataattaac 21794780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 27552021 - 27552111
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||||||||  |||||||||||||||||||| || |||| |||||| ||| | ||| |||||||| ||||||||||||||||||||    
T  27552021 aaaaacgttggggatgaaaaatttaataaaatttaaatagggaccaatgttaaaagctcgcttatttatagggaccttaaacataattaac 27552111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 36362269 - 36362179
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||||||||| |||||||||||||||||||| |  ||| |||||||| ||||  ||||||||||||| |||| |||||||||||||    
T  36362269 aaaaacgttggggactaaaaatttaataaaatttaaatggggattaatgttggaaacatgcctatttataagaacctaaaacataattaac 36362179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 12251889 - 12251979
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||||||||  |||||||||||||||||||| || |||| ||||||| || | ||| |||||||| |||| |||||||||||||||    
T  12251889 aaaaacgttggggatgaaaaatttaataaaatttaaatagggaccaatgttggaagctcgcttatttatagggactttaaacataattaac 12251979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 37985999 - 37985910
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||||| || ||||||||||||||||||||| || |||||||||||| |||| || |||||||||| || || |||||||||||||    
T  37985999 aaaaacgttggagatcaaaaatttaataaaatttaaatagggactaatgttgcaaacacgtctatttataa-gatctaaaacataattaac 37985910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 51340123 - 51340213
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||| |||||||  |||||||||||||||||||| || |||| |||| ||||||| ||| ||| | |||||||||||||||||||||||    
T  51340123 aaaaacattggggatgaaaaatttaataaaatttaaatagggaccaatgctgaaaactcgcttatatgtaaggaccttaaacataattaac 51340213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 12898894 - 12898984
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||| ||||||||  |||||||||||||||||||| || | || ||||||| || | ||| |||||||| ||||||||||||||||||||    
T  12898894 aaaaaagttggggatgaaaaatttaataaaatttaaataggaaccaatgttggaagctcgcttatttatagggaccttaaacataattaac 12898984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 237
Target Start/End: Original strand, 30982852 - 30982921
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcg 237  Q
    ||||||||  || |||||||||||  ||||||||||||||||||||||| |||||||||||| |||||||    
T  30982852 gctaacggaaaagaacgttggggataaaaaatttaataaaatttaagtagggactaatgttggaaacgcg 30982921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 178 - 267
Target Start/End: Complemental strand, 51839986 - 51839897
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaa 267  Q
    |||||| |||||||  |||||||||||||||||||| || |||| ||||||| || | ||| |||||||| |||| ||||||||||||||    
T  51839986 aaaaacattggggatgaaaaatttaataaaatttaaatagggaccaatgttggaagctcgcttatttatagggactttaaacataattaa 51839897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 42071457 - 42071528
Alignment:
Q  16 attgagagaaaatctcgaataattttattgaataaaaaagtgtctcttatgctgcataatgttctgtttaaa 87  Q
    ||||||||| |||||||||||||||||||||||  |||| ||  ||||| ||||||||||||| ||||||||    
T  42071457 attgagagagaatctcgaataattttattgaattcaaaaatgcatcttaggctgcataatgttatgtttaaa 42071528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 11999506 - 11999416
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||||| | | ||||| ||||||||||||||| || ||||||||||| |||||  | |||||||||  ||||| |||||||||||||    
T  11999506 aaaaacgttgagaatcaaaattttaataaaatttaaatagggactaatgttaaaaacatgtctatttatagagacctaaaacataattaac 11999416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 268
Target Start/End: Complemental strand, 12896699 - 12896625
Alignment:
Q  194 aaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||||||||||||||| ||||||| |||||| ||| |  || ||||| || ||||||||||||||||||||    
T  12896699 aaaaatttaataaaatttaaataaggaccaatgttaaaagcttgcttatttgtagggaccttaaacataattaac 12896625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 50857580 - 50857640
Alignment:
Q  16 attgagagaaaatctcgaataattttattgaataaaaaagtgt--ctcttatgctgcataa 74  Q
    |||||||||||||||||||||||||||||| || |||||||||  |||||| |||||||||    
T  50857580 attgagagaaaatctcgaataattttattgtatcaaaaagtgtgcctcttaggctgcataa 50857640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 47
Target Start/End: Original strand, 12486361 - 12486392
Alignment:
Q  16 attgagagaaaatctcgaataattttattgaa 47  Q
    ||||||||||||||||||||||||||||||||    
T  12486361 attgagagaaaatctcgaataattttattgaa 12486392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 268
Target Start/End: Original strand, 51841538 - 51841621
Alignment:
Q  185 ttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||  ||||| || ||||||||||| ||  ||| |||||||||| |  || ||||| |||||||||||||||||||||||    
T  51841538 ttggggatgaaaaaatttataaaatttaaatagtgacaaatgttgaaagcttgcttatttgtaaggaccttaaacataattaac 51841621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 268
Target Start/End: Complemental strand, 51338215 - 51338141
Alignment:
Q  194 aaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||||||||||||||| || | || ||||||| |||| ||| ||||| || ||| |||||| |||||||||    
T  51338215 aaaaatttaataaaatttaaataggaaccaatgttggaaactcgcttatttgtagggatcttaaatataattaac 51338141  T

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Target: chr3 (Bit Score: 72; Significance: 8e-33; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 125 - 268
Target Start/End: Complemental strand, 19825425 - 19825282
Alignment:
Q  125 ccgttaacccaatcatcaacaattgacggtagggaccaaattcgctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaa 224  Q
    |||||| |||||||| ||| |||| || ||| ||||||||| | ||||||| |||||||||||||||||||||||||||| |||||||||||  ||||||    
T  19825425 ccgttagcccaatcagcaaaaattaacagtaaggaccaaatacactaacggacaaaaacgttggggaccaaaaatttaattaaatttaagtagagactaa 19825326  T
Q  225 tgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||| | || || ||||||||| |||||||| |||||||||||    
T  19825325 tgttggagacacgtctatttatagggaccttagacataattaac 19825282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 54185392 - 54185304
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataatta 266  Q
    |||||||||| |||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||| |||||||||||    
T  54185392 aaaaacgttgtggaccaaaaatttaataaaatttaagtaggaactaatgttggaaacgcgcctatttataaggacctaaaacataatta 54185304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 153 - 268
Target Start/End: Original strand, 3670684 - 3670799
Alignment:
Q  153 gtagggaccaaattcgctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggac 252  Q
    ||||||||||||| | ||||||| ||||||||||| ||||||||||| ||||||||||||||||  ||  ||||||| |||| || ||||||||||||||    
T  3670684 gtagggaccaaatacactaacggacaaaaacgttgaggaccaaaaatataataaaatttaagtagagatcaatgttggaaacacgtctatttataaggac 3670783  T
Q  253 cttaaacataattaac 268  Q
    ||||||||||||||||    
T  3670784 cttaaacataattaac 3670799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 168 - 266
Target Start/End: Complemental strand, 116724 - 116626
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataatta 266  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||| |||||||| |||||| |||||||||||    
T  116724 gctaacggaaaaaaacgttggggaccaaaaatttaataaaatttaagtagggactaatgttggaaacacgcttatttatagggacctaaaacataatta 116626  T

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Target: chr3; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 27867867 - 27867777
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||||| |||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||| |||||| |||||||||||||    
T  27867867 aaaaacgttgaggaccaaaaatttaataaaatttaagtatgaactaatgttgaaaactcgcctatttatagggacctaaaacataattaac 27867777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 37180069 - 37180159
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||| |||||| |||| ||||||||    
T  37180069 aaaaacgttggggaccaaaaatttaataaaatttaagtagggactaatgttggaaacacgcctatttatagggacctaaaacgtaattaac 37180159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 168 - 268
Target Start/End: Complemental strand, 45234516 - 45234417
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaa 267  Q
    ||||||||  |||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||| ||||||||| ||||||| ||||||||||||    
T  45234516 gctaacggaaaaaaacgttggggatcaaaaatttaataaaatttaagtagggactaatgttggaaacgcacctatttat-aggacctaaaacataattaa 45234418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 117937 - 118027
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||| ||||||||||||||||||||||||||||||  ||||||||||| |||| |||||||||||| |||||| |||||||||||||    
T  117937 aaaaacgtcggggaccaaaaatttaataaaatttaagtagagactaatgttggaaacacgcctatttatagggacctaaaacataattaac 118027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 147 - 269
Target Start/End: Original strand, 19831087 - 19831209
Alignment:
Q  147 ttgacggtagggaccaaattcgctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttat 246  Q
    ||||||| | ||||||||| |  |||||| ||||||| ||||  |||||||||||||||||||||||||| |||||||||||| |||| | | |||||||    
T  19831087 ttgacggcaaggaccaaatacattaacggacaaaaacattggaaaccaaaaatttaataaaatttaagtagggactaatgttggaaacacacttatttat 19831186  T
Q  247 aaggaccttaaacataattaact 269  Q
    | |||||||||||||||||||||    
T  19831187 agggaccttaaacataattaact 19831209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 50614336 - 50614246
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||| | ||||||| |||||    
T  50614336 aaaaatgttggggaccaaaaatttaataaaatttaagtagggactaatgttgaaaacgcgcctatttatagagacttaaaacatatttaac 50614246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 44558071 - 44558161
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||  ||||| ||||||||||||||||||||||| |||||||||||| ||||||| ||||||||| |||||| |||||||||||||    
T  44558071 aaaaacgtcagggacgaaaaatttaataaaatttaagtagggactaatgttggaaacgcgtctatttatagggacctaaaacataattaac 44558161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 54185829 - 54185919
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||| |||||||| |||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||| || | |||||||||||||    
T  54185829 aaaaatgttggggatcaaaaatttaataaaatttaagtatggattaatgttgaaaacacgcctatttataagaacataaaacataattaac 54185919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 19795202 - 19795135
Alignment:
Q  20 agagaaaatctcgaataattttattgaataaaaaagtgtctcttatgctgcataatgttctgtttaaa 87  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  19795202 agagaaaatctggaataattttattgaataaaaaattgtctcttaggctgcataatgttctgtttaaa 19795135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 32942779 - 32942689
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||  ||||  |||| |||||| |||||| |||||||||||||    
T  32942779 aaaaacgttggggatcaaaaatttaataaaatttaagtagggactaatgttagaaacatgcctctttatagggacctaaaacataattaac 32942689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 32944111 - 32944201
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||||  | ||||||||||||||||||||||||||  |||||||||| |||||| ||||||||||| |||||| |||||||||||||    
T  32944111 aaaaacgttaagaaccaaaaatttaataaaatttaagtagagactaatgttaaaaacgtgcctatttatagggacctaaaacataattaac 32944201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 254
Target Start/End: Complemental strand, 37178729 - 37178653
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggacct 254  Q
    |||||||||||||| |||||||||||||||||||||||| ||| |||||||| |||| |||||||||||| ||||||    
T  37178729 aaaaacgttggggatcaaaaatttaataaaatttaagtatggattaatgttggaaacacgcctatttatagggacct 37178653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 168 - 268
Target Start/End: Complemental strand, 53244813 - 53244714
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaa 267  Q
    ||||||||| ||||| |||||||   ||||||||| ||||||||||||| |||||||||||||||||| |||||||| || |||||| ||||||||||||    
T  53244813 gctaacggc-aaaaatgttggggtaaaaaaatttattaaaatttaagtagggactaatgttgaaaacgtgcctatttgtatggacctcaaacataattaa 53244715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 19669487 - 19669420
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctattta 245  Q
    ||||||||||| || |||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  19669487 aaaaacgttggagatcaaaaatttaataaaatttaagtagggactaatgttggaaacgcgcctattta 19669420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 189 - 268
Target Start/End: Original strand, 50615588 - 50615666
Alignment:
Q  189 ggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||||||||||| ||| ||||||||||||||||||  |||||||||||||||||| ||||| |||||||||||||    
T  50615588 ggaccaaaaatttaatagaatgtaagtaaggactaatgttagaaacgcgcctatttataa-gacctaaaacataattaac 50615666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 265
Target Start/End: Original strand, 45235839 - 45235936
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataatt 265  Q
    ||||||||  |||||||||| | |  ||||||||||||||||||||||||| |||||| || ||||| |||||||||||||| |||| ||||||||||    
T  45235839 gctaacggaaaaaaacgttgagaataaaaaatttaataaaatttaagtaagaactaatattaaaaacacgcctatttataagtacctaaaacataatt 45235936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 268
Target Start/End: Complemental strand, 32146783 - 32146700
Alignment:
Q  185 ttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||  ||||||||||||||||||||||| | |||||||||| |||  |||||||||||| |||||| |||||||||||||    
T  32146783 ttggggataaaaaatttaataaaatttaagtatgaactaatgttggaaatacgcctatttatatggacctaaaacataattaac 32146700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 32148103 - 32148193
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||||| |||| ||||||||||||||||||||  | | |||||||||| |||  |||||||||||| |||||| |||||||||||||    
T  32148103 aaaaacgttgaggacaaaaaatttaataaaatttaaacaggaactaatgttggaaatacgcctatttatagggacctaaaacataattaac 32148193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 33476682 - 33476772
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||||||||  |||||||||||||||||||| || |||| ||| |||||| | ||| ||||||||  |||||||||||||||||||    
T  33476682 aaaaacgttggggaggaaaaatttaataaaatttaaatagggaccaatattgaaagctcgcttatttatagagaccttaaacataattaac 33476772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 41786579 - 41786669
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||||||||| |||||||||||||||||||||||| ||| |||||||| ||||   |||||||| | ||| || |||||||||||||    
T  41786579 aaaaacgttggggatcaaaaatttaataaaatttaagtagggaataatgttggaaacaaacctatttacagggatctaaaacataattaac 41786669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 267
Target Start/End: Original strand, 8576432 - 8576521
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaa 267  Q
    ||||||||||||||  |||||||||||||||||||| || |||||||||||| || |  || ||||| || |||||||||||||||||||    
T  8576432 aaaaacgttggggaagaaaaatttaataaaatttaaatagggactaatgttggaagcttgcttatttgtacggaccttaaacataattaa 8576521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 147 - 268
Target Start/End: Complemental strand, 52700961 - 52700840
Alignment:
Q  147 ttgacggtagggaccaaattcgctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttat 246  Q
    ||||||||| |||||||| |  | |||||  ||||||||||||||  |||||||||||||||||| |||| | |  ||||||| || | ||| ||||| |    
T  52700961 ttgacggtaaggaccaaacttacaaacggaaaaaaacgttggggatgaaaaatttaataaaattttagtaggaatcaatgttggaagctcgcttatttgt 52700862  T
Q  247 aaggaccttaaacataattaac 268  Q
    ||||||||||||||||||||||    
T  52700861 aaggaccttaaacataattaac 52700840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 268
Target Start/End: Complemental strand, 41927024 - 41926950
Alignment:
Q  194 aaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||||||||||||||| || |||| ||||||| || | ||| |||||||| ||||||||||||||||||||    
T  41927024 aaaaatttaataaaatttaaatagggaccaatgttggaagctcgcttatttatagggaccttaaacataattaac 41926950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 197 - 267
Target Start/End: Original strand, 53246660 - 53246730
Alignment:
Q  197 aatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaa 267  Q
    |||||| ||||||||||||| ||| ||||||||||||| | | |||||||| |||||||||||||||||||    
T  53246660 aatttattaaaatttaagtagggattaatgttgaaaacacacttatttatatggaccttaaacataattaa 53246730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 229
Target Start/End: Original strand, 1430399 - 1430460
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttg 229  Q
    ||||||||  |||||||| |||||||||||||||||||||||||||||| ||||| ||||||    
T  1430399 gctaacggaaaaaaacgtcggggaccaaaaatttaataaaatttaagtagggactgatgttg 1430460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 41928364 - 41928452
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||||||||  |||||||||||||||||||| ||||||| |||||| ||| | ||| ||||  || | ||||||||||||||||||    
T  41928364 aaaaacgttggggatgaaaaatttaataaaatttaaataaggaccaatgttaaaagctcgcttatt--taggaaccttaaacataattaac 41928452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 268
Target Start/End: Complemental strand, 45387216 - 45387153
Alignment:
Q  205 aaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||||||| |||||||||||| ||||||||||||||||| |||| | |||| ||||||||    
T  45387216 aaaatttaagtatggactaatgttggaaacgcgcctatttatagggacgtaaaacctaattaac 45387153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 58
Target Start/End: Complemental strand, 5128862 - 5128820
Alignment:
Q  16 attgagagaaaatctcgaataattttattgaataaaaaagtgt 58  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  5128862 attgagagaaaatctcgaataattttattgaatcaaaaagtgt 5128820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 8575072 - 8574982
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||||||||  |||||||||||||||||||| || |||  ||||||| || | | | ||||| || ||||||||||||||||||||    
T  8575072 aaaaacgttggggatgaaaaatttaataaaatttaaatatggatcaatgttggaagctcacttatttgtagggaccttaaacataattaac 8574982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 54
Target Start/End: Original strand, 45168428 - 45168466
Alignment:
Q  16 attgagagaaaatctcgaataattttattgaataaaaaa 54  Q
    |||||||||||||||||||||||||||||||||||||||    
T  45168428 attgagagaaaatctcgaataattttattgaataaaaaa 45168466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 44555170 - 44555097
Alignment:
Q  165 ttcgctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgc 238  Q
    |||||||||||  ||||| || ||| || ||||||||||||||||||||||| |||||||||||  ||||||||    
T  44555170 ttcgctaacggaaaaaaatgtcgggaacaaaaaatttaataaaatttaagtagggactaatgttagaaacgcgc 44555097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 253
Target Start/End: Original strand, 44557128 - 44557203
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggacc 253  Q
    ||||||||||||||  |||||||||||||||||||| || |||| |||||| ||| | ||| |||||||| |||||    
T  44557128 aaaaacgttggggatgaaaaatttaataaaatttaaatagggaccaatgttaaaagctcgcttatttatagggacc 44557203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 268
Target Start/End: Original strand, 25233404 - 25233478
Alignment:
Q  194 aaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||||||||||||||| || |||| ||||||| || | ||| ||||| || ||||||||||||||| ||||    
T  25233404 aaaaatttaataaaatttaaatagggaccaatgttggaagctcgcttatttgtagggaccttaaacataagtaac 25233478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 252
Target Start/End: Complemental strand, 53439097 - 53439039
Alignment:
Q  194 aaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggac 252  Q
    ||||||||||||||||||||||| | |||||||||  |||| |||||||||||| ||||    
T  53439097 aaaaatttaataaaatttaagtaggaactaatgttagaaacacgcctatttatagggac 53439039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 267
Target Start/End: Original strand, 52702188 - 52702277
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaa 267  Q
    |||||||| |||||  |||||||||||| ||||| | || |||| ||||||| || | | ||||||| || |||||||||||||||||||    
T  52702188 aaaaacgtcggggatgaaaaatttaatataattttaatagggaccaatgttggaagctcacctatttgtagggaccttaaacataattaa 52702277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 268
Target Start/End: Original strand, 31992189 - 31992263
Alignment:
Q  194 aaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||||||||||||||| || | |  |||||||||| | ||| ||||| || ||||| ||||||||||||||    
T  31992189 aaaaatttaataaaatttaaataggaatcaatgttgaaagctcgcttatttgtagggaccataaacataattaac 31992263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 1697153 - 1697205
Alignment:
Q  34 ataattttattgaataaaaaagtgtctcttatgctgcataatgttctgtttaaa 87  Q
    ||||||||||||||| ||||||| ||||||| | ||||||| ||||||||||||    
T  1697153 ataattttattgaatgaaaaagtatctcttaagttgcataa-gttctgtttaaa 1697205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 39913364 - 39913436
Alignment:
Q  16 attgagagaaaa-tctcgaataattttattgaat-aaaaaagtgtctcttatgctgcataatgttctgtttaaa 87  Q
    |||| ||||||| ||||||||| ||||||||||| ||||| ||| |||||| ||||||||| ||||||||||||    
T  39913364 attgggagaaaagtctcgaatatttttattgaatcaaaaatgtgcctcttaggctgcataa-gttctgtttaaa 39913436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 41218757 - 41218686
Alignment:
Q  16 attgagagaaaa-tctcgaataattttattgaataaaaaagtgtctcttatgctgcataatgttctgtttaaa 87  Q
    |||||||||||| ||||||||| | |||||||||||||  |||||||||| ||| ||||| |||||| |||||    
T  41218757 attgagagaaaagtctcgaatattattattgaataaaagtgtgtctcttaggctccataa-gttctgcttaaa 41218686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 5611 - 5521
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||| |||||| |||||||||||||    
T  5611 aaaaacgttggggaccaaaaatttaataaaatttaagtagggactaatgttagaaacgcgcctatttatagggacctaaaacataattaac 5521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 194 - 265
Target Start/End: Original strand, 7384 - 7455
Alignment:
Q  194 aaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataatt 265  Q
    ||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||| || ||||||||||    
T  7384 aaaaatttaataaaatttaagtagggactaatgttggaaacgcacctatttataaggatctaaaacataatt 7455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 71; Significance: 3e-32; HSPs: 3)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 25554 - 25644
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  25554 aaaaacttcggggaccaaaaatttaataaaatttaagtatggactaatgttgaaaacgcgcctatttatagggacctaaaacataattaac 25644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 178 - 254
Target Start/End: Original strand, 23379 - 23455
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggacct 254  Q
    |||||||||||||| ||||||| |||||||||||||||| |||||||||||| ||||||||||||||||| ||||||    
T  23379 aaaaacgttggggatcaaaaatgtaataaaatttaagtagggactaatgttggaaacgcgcctatttatagggacct 23455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 205 - 269
Target Start/End: Original strand, 24907 - 24971
Alignment:
Q  205 aaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaact 269  Q
    |||||||||||| |||||||||||  ||| | ||||||||||| |||||| ||||||||||||||    
T  24907 aaaatttaagtagggactaatgttagaaatgtgcctatttatagggacctaaaacataattaact 24971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 3e-32; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 20721725 - 20721815
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  20721725 aaaaacttcggggaccaaaaatttaataaaatttaagtatggactaatgttgaaaacgcgcctatttatagggacctaaaacataattaac 20721815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 168 - 268
Target Start/End: Original strand, 44493994 - 44494094
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaa 267  Q
    ||||||||  |||||||||| |||||||||||||||||||||||||||| |||||||||||| |||| |||| |||||||||||||| ||||||||||||    
T  44493994 gctaacggaaaaaaacgttgaggaccaaaaatttaataaaatttaagtagggactaatgttggaaacacgccaatttataaggacctaaaacataattaa 44494093  T
Q  268 c 268  Q
    |    
T  44494094 c 44494094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 21439087 - 21438997
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||| ||| || |||||||||||||    
T  21439087 aaaaacgttggggaccaaaaatttaataaaatttaagtatagactaatgttggaaacgcgcctatttatagggatctaaaacataattaac 21438997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 168 - 269
Target Start/End: Original strand, 20721042 - 20721143
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaa 267  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||  ||| | ||||||||||| |||||| ||||||||||||    
T  20721042 gctaacggaaaaaaacgttggggaccaaaaatttaataaaatttaagtagggactaatgttagaaatgtgcctatttatagggacctaaaacataattaa 20721141  T
Q  268 ct 269  Q
    ||    
T  20721142 ct 20721143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 168 - 268
Target Start/End: Complemental strand, 23787421 - 23787321
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaa 267  Q
    ||||||||  |||||||| |||||||||||||||||||||||||||||  |||||||||||| |||| |||||||||||| |||||| ||||||||||||    
T  23787421 gctaacggaaaaaaacgtaggggaccaaaaatttaataaaatttaagtggggactaatgttggaaacacgcctatttatagggacctaaaacataattaa 23787322  T
Q  268 c 268  Q
    |    
T  23787321 c 23787321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 168 - 268
Target Start/End: Original strand, 33001356 - 33001456
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaa 267  Q
    ||||||||  |||||||||||||| |||||||||||||||||||||| | |||||||||||| |||| || ||||||||| |||||| ||||||||||||    
T  33001356 gctaacggaaaaaaacgttggggatcaaaaatttaataaaatttaagcagggactaatgttggaaacacgtctatttatagggacctaaaacataattaa 33001455  T
Q  268 c 268  Q
    |    
T  33001456 c 33001456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 43931931 - 43931841
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||| |||||||| |  ||||||||| |||||| |||||||||||||    
T  43931931 aaaaacgttggggaccaaaaatttaataaaatttaagtagagactaatattgaaaacaccgctatttatagggacctaaaacataattaac 43931841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 44492672 - 44492582
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||| ||||||| || ||||||||||||||||||||| ||| |||||||| ||||||||||||||||| |||||| |||||||||||||    
T  44492672 aaaaacattggggatcacaaatttaataaaatttaagtatggattaatgttggaaacgcgcctatttatagggacctaaaacataattaac 44492582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 178 - 247
Target Start/End: Complemental strand, 42486843 - 42486774
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttata 247  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  42486843 aaaaactttggggaccaaaaatttaataaaatttaagtatggactaatgttggaaacgcgcctatttata 42486774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 184 - 269
Target Start/End: Original strand, 42488178 - 42488263
Alignment:
Q  184 gttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaact 269  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||| | ||||||| || |||||| ||||||||||||||    
T  42488178 gttggggaccaaaaatttaataaaatttaagtaggaactaatgttgaaaacacacctatttttagggacctaaaacataattaact 42488263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 178 - 254
Target Start/End: Original strand, 20719541 - 20719617
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggacct 254  Q
    |||||||||||||| ||||||| |||||||||||||||| |||||||||||| ||||||||||||||||| ||||||    
T  20719541 aaaaacgttggggatcaaaaatgtaataaaatttaagtagggactaatgttggaaacgcgcctatttatagggacct 20719617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 264
Target Start/End: Complemental strand, 1373355 - 1373269
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataat 264  Q
    ||||||||||| ||||||||||||||||||||||| ||| |||||||||||| ||||  ||||||||||| |||||| |||||||||    
T  1373355 aaaaacgttggtgaccaaaaatttaataaaatttatgtagggactaatgttggaaacatgcctatttatagggacctaaaacataat 1373269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 168 - 268
Target Start/End: Complemental strand, 33000772 - 33000674
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaa 267  Q
    ||||||||  |||||| |||||||||||||||||||||||||||||||| | ||||| |||| |||||||||||||||| |||||| || ||||||||||    
T  33000772 gctaacggaaaaaaacattggggaccaaaaatttaataaaatttaagtaggaactaacgttggaaacgcgcctatttat-aggacc-tatacataattaa 33000675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 168 - 260
Target Start/End: Complemental strand, 38276143 - 38276051
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaaca 260  Q
    ||||||||  ||||||||||||||||||||||||||||||||||| |||  ||||||||||| |||  |||||||||||| |||||| |||||    
T  38276143 gctaacggaaaaaaacgttggggaccaaaaatttaataaaatttatgtagagactaatgttggaaatacgcctatttatagggacctaaaaca 38276051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 8781467 - 8781395
Alignment:
Q  16 attgagagaaaatctcgaataattttattgaat-aaaaaagtgtctcttatgctgcataatgttctgtttaaa 87  Q
    |||||||| |||||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||||    
T  8781467 attgagagtaaatctcgaataattttattgaatgaaaaaagtgcctcttaggctgcataacgttctgtttaaa 8781395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 184 - 268
Target Start/End: Original strand, 43933244 - 43933328
Alignment:
Q  184 gttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||  || ||||||||||||||||||||  |||||||||||||||| |||||||||||| |||||| ||| |||||||||    
T  43933244 gttggggataaagaatttaataaaatttaagtagagactaatgttgaaaacacgcctatttatacggacctaaaaaataattaac 43933328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 269
Target Start/End: Complemental strand, 9190146 - 9190055
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaact 269  Q
    |||||| ||||||||||||| |||| ||||||||||||| |||||||||||  ||||| | ||||||| |  ||||||||||||||||||||    
T  9190146 aaaaacattggggaccaaaagtttattaaaatttaagtatggactaatgttagaaacgagactatttacagagaccttaaacataattaact 9190055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 22264388 - 22264317
Alignment:
Q  16 attgagagaaaatctcgaataattttattgaataaaaaagtgtctcttatgctgcataatgttctgtttaaa 87  Q
    ||||||| ||||||||||||||||||||||||| |||||||| |||||| ||||||||||||| || |||||    
T  22264388 attgagataaaatctcgaataattttattgaatcaaaaagtgcctcttaggctgcataatgttatgcttaaa 22264317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 1373705 - 1373794
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||| |||| ||| ||||||||||||||||||||||| |||||||||||| |||| || |||||||| || |||| |||||||||||||    
T  1373705 aaaaacattggtgacaaaaaatttaataaaatttaagtagggactaatgttggaaacacgtctatttat-agaacctaaaacataattaac 1373794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 9112201 - 9112291
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||||||||  |||||||||||||||||||| || | || |||||||||| | ||| ||||||||  |||||||||||||||||||    
T  9112201 aaaaacgttggggatgaaaaatttaataaaatttaaataggaaccaatgttgaaagctcgcttatttatagagaccttaaacataattaac 9112291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 32319471 - 32319561
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||||||||  |||||||||||||||||||| || |||| |||||| ||  | ||| |||||||||||||||||| ||||||||||    
T  32319471 aaaaacgttggggatgaaaaatttaataaaatttaaatagggaccaatgttaaatgctcgcttatttataaggaccttaagcataattaac 32319561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 194 - 267
Target Start/End: Complemental strand, 3104766 - 3104693
Alignment:
Q  194 aaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaa 267  Q
    ||||||||||||||||||||||| | |||||||||| |||| ||| |||||||| |||||| ||||||||||||    
T  3104766 aaaaatttaataaaatttaagtatgaactaatgttggaaacacgcttatttatagggacctaaaacataattaa 3104693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 205 - 268
Target Start/End: Original strand, 3105939 - 3106002
Alignment:
Q  205 aaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||||||| |||||||||||| |||||| |||||||||| |||||| |||||||||||||    
T  3105939 aaaatttaagtagggactaatgttggaaacgcacctatttatagggacctaaaacataattaac 3106002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 205 - 268
Target Start/End: Complemental strand, 18672038 - 18671975
Alignment:
Q  205 aaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||||||||||||||||||| |||||| |||||||||| ||| || |||||||||||||    
T  18672038 aaaatttaagtaaggactaatgttggaaacgcacctatttatatggatctaaaacataattaac 18671975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 3119032 - 3119122
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||| ||||||||  |||||||||||||||||||| || || | |||||| ||| | ||| |||||||||| ||||||||||||||||||    
T  3119032 aaaaatgttggggatgaaaaatttaataaaatttaaatagggtcaaatgttaaaagctcgcttatttataagaaccttaaacataattaac 3119122  T

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Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 268
Target Start/End: Original strand, 18673325 - 18673407
Alignment:
Q  187 ggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttata-aggaccttaaacataattaac 268  Q
    ||||||||||||||||||||||||||| || ||| |||||||| |||| |||||||||||| |  |||| |||||||||||||    
T  18673325 ggggaccaaaaatttaataaaatttaaatagggattaatgttggaaacacgcctatttatagaaaacctaaaacataattaac 18673407  T

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Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 58
Target Start/End: Original strand, 27952454 - 27952496
Alignment:
Q  16 attgagagaaaatctcgaataattttattgaataaaaaagtgt 58  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  27952454 attgagagaaaatctcgaataattttattgaatcaaaaagtgt 27952496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 58
Target Start/End: Original strand, 27956290 - 27956332
Alignment:
Q  16 attgagagaaaatctcgaataattttattgaataaaaaagtgt 58  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  27956290 attgagagaaaatctcgaataattttattgaatcaaaaagtgt 27956332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 58
Target Start/End: Complemental strand, 33655580 - 33655538
Alignment:
Q  16 attgagagaaaatctcgaataattttattgaataaaaaagtgt 58  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  33655580 attgagagaaaatctcgaataattttattgaatgaaaaagtgt 33655538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 20701052 - 20701004
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagta 216  Q
    ||||||||  |||||||||||||| ||||||||||||||||||||||||    
T  20701052 gctaacggaaaaaaacgttggggatcaaaaatttaataaaatttaagta 20701004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 9111338 - 9111248
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||||| |||  |||||||||||||||||||| || |||  ||||||| || | ||  |||||||||| || |||||||||||||||    
T  9111338 aaaaacgttgaggatgaaaaatttaataaaatttaaatagggatcaatgttggaagctcgtttatttataagaactttaaacataattaac 9111248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 246
Target Start/End: Original strand, 23788039 - 23788116
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttat 246  Q
    ||||||||  |||||||||||| | |||||||||||||||||||| ||||| | |||||||| |||  |||||||||||    
T  23788039 gctaacgggaaaaaacgttggg-atcaaaaatttaataaaatttatgtaagaattaatgttggaaatacgcctatttat 23788116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 268
Target Start/End: Complemental strand, 3117738 - 3117649
Alignment:
Q  179 aaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||||||||  |||||||||||||||||||| || |||  |||||||||| |  || |||||    ||||||||||||||||||||    
T  3117738 aaaacgttggggatgaaaaatttaataaaatttaaatagggatcaatgttgaaagcttgcttatttgccgggaccttaaacataattaac 3117649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 268
Target Start/End: Original strand, 30982933 - 30983006
Alignment:
Q  194 aaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||||||||||||| |||| |||| ||||||| || | ||| ||||| | | |||||||||||||||||||    
T  30982933 aaaaatttaataaaattttagtagggaccaatgttggaagctcgcttatttgt-atgaccttaaacataattaac 30983006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 268
Target Start/End: Complemental strand, 32317965 - 32317891
Alignment:
Q  194 aaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||||||||||||||||||| || | || ||||||| || | ||| |||||||| |||| |||||| ||||||||    
T  32317965 aaaaatttaataaaatttaaataggaaccaatgttggaagctcgcttatttatagggactttaaacctaattaac 32317891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 213
Target Start/End: Original strand, 34477224 - 34477266
Alignment:
Q  171 aacggccaaaaacgttggggaccaaaaatttaataaaatttaa 213  Q
    ||||| ||||||||||||| | |||||||||||||||||||||    
T  34477224 aacggacaaaaacgttgggaatcaaaaatttaataaaatttaa 34477266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 168 - 268
Target Start/End: Original strand, 49250 - 49350
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaa 267  Q
    ||||||||  |||||||| || ||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||| |||||| ||||||||||||    
T  49250 gctaacggaaaaaaacgtcggagaccaaaaatttaataaaatttaagtagggactaatgttggaaacacgcctatttatagggacctaaaacataattaa 49349  T
Q  268 c 268  Q
    |    
T  49350 c 49350  T

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Target: scaffold0003 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 168 - 268
Target Start/End: Complemental strand, 239308 - 239208
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaa 267  Q
    ||||||||  ||||||||||||||||||||||| ||||||||||| ||| |||||||||||| |||||| |||||||||| |||||| ||||||||||||    
T  239308 gctaacggaaaaaaacgttggggaccaaaaattgaataaaatttaggtagggactaatgttggaaacgcacctatttatagggacctaaaacataattaa 239209  T
Q  268 c 268  Q
    |    
T  239208 c 239208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 247
Target Start/End: Original strand, 240493 - 240572
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttata 247  Q
    ||||||||  |||||||| |||||||||||||||||||||||||||||||  |||||||||  |||||||| ||||||||    
T  240493 gctaacggaaaaaaacgtcggggaccaaaaatttaataaaatttaagtaaaaactaatgttagaaacgcgcatatttata 240572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 165 - 268
Target Start/End: Original strand, 214 - 315
Alignment:
Q  165 ttcgctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataat 264  Q
    |||||||||||  ||||||||||| |||||||||| ||||||||||||||||  | ||||||||||||||||||||||||||  | |||| |||||||||    
T  214 ttcgctaacgg--aaaaacgttggagaccaaaaatataataaaatttaagtagaggctaatgttgaaaacgcgcctatttattggaacctaaaacataat 311  T
Q  265 taac 268  Q
    ||||    
T  312 taac 315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 147 - 268
Target Start/End: Complemental strand, 282734 - 282613
Alignment:
Q  147 ttgacggtagggaccaaattcgctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttat 246  Q
    ||||||||| |||||||| |  | |||||  ||||||||||||||  |||||||||||||||||||| || |||| ||||||| |||| ||| |||||||    
T  282734 ttgacggtaaggaccaaacttacaaacggaaaaaaacgttggggatgaaaaatttaataaaatttaaatagggaccaatgttggaaactcgcttatttat 282635  T
Q  247 aaggaccttaaacataattaac 268  Q
    | |||| |||||||||||||||    
T  282634 agggactttaaacataattaac 282613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 283762 - 283852
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||||||||  ||||||||||||||||| || || |||| ||| || ||| | ||| ||||||||||||| |||||||||||||||    
T  283762 aaaaacgttggggatgaaaaatttaataaaattaaaatagggaccaatattaaaagctcgcttatttataaggactttaaacataattaac 283852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 187 - 268
Target Start/End: Original strand, 10463 - 10544
Alignment:
Q  187 ggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||||||||||||||||||||||||  ||||||| || |||| ||| |||||||||  ||||| |||||||||||||    
T  10463 ggggaccaaaaatttaataaaatttaagtagagactaatattaaaaatgcgtctatttatagagacctaaaacataattaac 10544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 264
Target Start/End: Original strand, 38874 - 38970
Alignment:
Q  168 gctaacggccaaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataat 264  Q
    ||||||||  |||||| ||||||| |||||||||||||||||||| ||| | |||||||||||||||  |||||||||||  ||||| ||| |||||    
T  38874 gctaacggaaaaaaacattggggatcaaaaatttaataaaatttatgtaggaactaatgttgaaaacatgcctatttatagagacctaaaatataat 38970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 268
Target Start/End: Complemental strand, 34747 - 34674
Alignment:
Q  195 aaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    |||| |||||| |||||||||| ||| ||||||||||||| | ||||||||||  ||||| ||| |||||||||    
T  34747 aaaaattaatacaatttaagtagggattaatgttgaaaacacacctatttatagagacctaaaatataattaac 34674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 58
Target Start/End: Original strand, 46840 - 46882
Alignment:
Q  16 attgagagaaaatctcgaataattttattgaataaaaaagtgt 58  Q
    ||||||||||||||||||||| | ||| |||||||||||||||    
T  46840 attgagagaaaatctcgaatattattaatgaataaaaaagtgt 46882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 100951 - 100861
Alignment:
Q  178 aaaaacgttggggaccaaaaatttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||||||||  |||||||||||||||||||  || |||| ||| ||| || | | | ||||| || ||| ||||||||||||||||    
T  100951 aaaaacgttggggatgaaaaatttaataaaatttatatagggaccaatattggaagctctcttatttgtagggatcttaaacataattaac 100861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 268
Target Start/End: Original strand, 100959 - 101028
Alignment:
Q  199 tttaataaaatttaagtaaggactaatgttgaaaacgcgcctatttataaggaccttaaacataattaac 268  Q
    ||||||||||||||| || |||| ||||||  ||||  || ||||| || ||||||||||||||||||||    
T  100959 tttaataaaatttaaatagggaccaatgttagaaacttgcttatttgtagggaccttaaacataattaac 101028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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