View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7394_low_1 (Length: 607)

Name: NF7394_low_1
Description: NF7394
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7394_low_1
NF7394_low_1
[»] chr8 (10 HSPs)
chr8 (14-342)||(9290871-9291198)
chr8 (14-220)||(8212610-8212815)
chr8 (212-351)||(8213409-8213548)
chr8 (313-354)||(21349415-21349456)
chr8 (310-347)||(22643653-22643690)
chr8 (310-347)||(22643689-22643726)
chr8 (315-348)||(44967468-44967501)
chr8 (315-355)||(8223746-8223786)
chr8 (315-355)||(16047108-16047148)
chr8 (314-354)||(23120539-23120579)
[»] chr3 (10 HSPs)
chr3 (14-348)||(51425063-51425397)
chr3 (315-355)||(9767934-9767974)
chr3 (295-355)||(53157295-53157355)
chr3 (315-355)||(11028087-11028127)
chr3 (315-355)||(15212753-15212793)
chr3 (315-355)||(15251972-15252012)
chr3 (319-355)||(41935248-41935284)
chr3 (315-355)||(46124044-46124084)
chr3 (312-355)||(18740866-18740909)
chr3 (315-355)||(6079881-6079921)
[»] chr4 (15 HSPs)
chr4 (375-589)||(3966913-3967126)
chr4 (14-214)||(7054103-7054303)
chr4 (14-193)||(1702263-1702444)
chr4 (379-547)||(3823666-3823833)
chr4 (14-193)||(9990915-9991096)
chr4 (196-286)||(7053959-7054049)
chr4 (14-111)||(16613348-16613447)
chr4 (315-355)||(43593848-43593888)
chr4 (319-355)||(50377342-50377378)
chr4 (312-342)||(13022599-13022629)
chr4 (313-355)||(13757151-13757193)
chr4 (315-348)||(9296849-9296882)
chr4 (315-348)||(42563599-42563632)
chr4 (315-348)||(52374279-52374312)
chr4 (315-351)||(18811329-18811365)
[»] scaffold0442 (1 HSPs)
scaffold0442 (14-200)||(11960-12146)
[»] chr2 (12 HSPs)
chr2 (14-197)||(38981173-38981356)
chr2 (196-341)||(38981410-38981555)
chr2 (101-193)||(24867045-24867135)
chr2 (315-355)||(2707137-2707177)
chr2 (315-355)||(24079511-24079551)
chr2 (315-355)||(31898587-31898627)
chr2 (287-338)||(23459204-23459255)
chr2 (315-354)||(25417097-25417136)
chr2 (310-347)||(25330896-25330933)
chr2 (315-368)||(45073807-45073860)
chr2 (22-58)||(24867137-24867173)
chr2 (314-342)||(44481339-44481367)
[»] scaffold0320 (2 HSPs)
scaffold0320 (14-214)||(13833-14033)
scaffold0320 (196-355)||(14087-14248)
[»] chr6 (21 HSPs)
chr6 (204-347)||(13718161-13718304)
chr6 (315-355)||(15907095-15907135)
chr6 (315-355)||(21393428-21393468)
chr6 (315-355)||(23160781-23160821)
chr6 (315-355)||(7456858-7456898)
chr6 (315-355)||(8848096-8848136)
chr6 (315-355)||(19382999-19383039)
chr6 (315-355)||(21683187-21683227)
chr6 (305-355)||(2666136-2666186)
chr6 (313-355)||(18801474-18801516)
chr6 (315-353)||(23094610-23094648)
chr6 (315-349)||(31569330-31569364)
chr6 (310-355)||(19002764-19002809)
chr6 (315-355)||(17102636-17102676)
chr6 (315-355)||(17724582-17724622)
chr6 (310-354)||(18175928-18175972)
chr6 (315-355)||(19214797-19214837)
chr6 (315-355)||(20882000-20882040)
chr6 (315-347)||(22291703-22291735)
chr6 (315-355)||(31877215-31877255)
chr6 (315-355)||(32616914-32616954)
[»] scaffold0072 (1 HSPs)
scaffold0072 (298-355)||(46300-46357)
[»] chr7 (5 HSPs)
chr7 (315-356)||(3568525-3568566)
chr7 (315-355)||(18535678-18535719)
chr7 (319-351)||(1966329-1966361)
chr7 (315-355)||(13796591-13796631)
chr7 (323-355)||(39703135-39703167)
[»] chr5 (7 HSPs)
chr5 (310-355)||(27032678-27032723)
chr5 (310-355)||(22362573-22362618)
chr5 (319-355)||(21112727-21112763)
chr5 (315-355)||(38925453-38925493)
chr5 (315-355)||(42883075-42883115)
chr5 (315-348)||(35328833-35328866)
chr5 (310-354)||(12563061-12563105)
[»] scaffold0077 (1 HSPs)
scaffold0077 (315-355)||(52540-52580)
[»] chr1 (7 HSPs)
chr1 (315-355)||(15723293-15723333)
chr1 (315-355)||(44201674-44201714)
chr1 (315-354)||(2248059-2248098)
chr1 (315-354)||(25614001-25614040)
chr1 (320-355)||(42958706-42958741)
chr1 (315-358)||(46351903-46351946)
chr1 (315-355)||(19193809-19193849)
[»] scaffold0590 (1 HSPs)
scaffold0590 (315-351)||(8958-8994)
[»] scaffold0337 (1 HSPs)
scaffold0337 (315-355)||(791-831)
[»] scaffold0281 (1 HSPs)
scaffold0281 (315-353)||(4589-4627)
[»] scaffold0003 (1 HSPs)
scaffold0003 (313-355)||(163151-163193)
[»] scaffold0283 (1 HSPs)
scaffold0283 (315-348)||(13602-13635)
[»] scaffold0039 (1 HSPs)
scaffold0039 (318-355)||(102248-102285)
[»] scaffold0557 (1 HSPs)
scaffold0557 (315-355)||(6451-6491)
[»] scaffold0553 (1 HSPs)
scaffold0553 (315-355)||(6565-6605)
[»] scaffold0214 (1 HSPs)
scaffold0214 (315-355)||(29235-29275)


Alignment Details
Target: chr8 (Bit Score: 273; Significance: 1e-152; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 14 - 342
Target Start/End: Original strand, 9290871 - 9291198
Alignment:
Q  14 aatatagaaacaaagccacatagtgggatgaaaagaccaagtagtacgaggatgaatatacatgctcaagtattatgacacacaatttggaacagtccat 113  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  9290871 aatatagaaacaaagccacatagtgggatgaaaagatcaagtagtactaggatgaatatacatgctcaagtattatgacacataatttggaacagtccat 9290970  T
Q  114 aaattatggttactatttttgtttgtttaagtcactcgagaaatttatggctttcatggtttttgtatggtgttgttgtaatatataaagaattgtaata 213  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9290971 aaattatggttaccatttttgtttgtttaagtcactcgagaaatttgtggccttcatggtttttgtatggtgttgttgtaatatataaagaattgtaata 9291070  T
Q  214 tattattttatttgtaggttcatgaaaaatatataaattacatgcaaacttaaaacaaaaccaatattttcacaagaaatatagtcaagtctataaacac 313  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||  ||| |||||||||||    
T  9291071 tattattttatttgtagattcatg-aaaatatataaattacatgcaaacttaaaacaaaatcaatattttcacaagaaacatatacaaatctataaacac 9291169  T
Q  314 attagcgcagtagaaagagcggacagacg 342  Q
    |||||||||||||||||||||||||||||    
T  9291170 attagcgcagtagaaagagcggacagacg 9291198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 14 - 220
Target Start/End: Original strand, 8212610 - 8212815
Alignment:
Q  14 aatatagaaacaaagccacatagtgggatgaaaagaccaagtagtacgaggatgaatatacatgctcaagtattatgacacacaatttggaacagtccat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||| ||||||||||||||||    
T  8212610 aatatagaaacaaagccacatagtgggatgaaaagaccaagtagtacgaggataaatat-catgcttaagtattatgacacacgatttggaacagtccat 8212708  T
Q  114 aaattatggttactatttttgtttgtttaagtcactcgagaaatttatggctttcatggtttttgtatggtgttgttgtaatatataaagaattgtaata 213  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8212709 aaattatggttaccatttttgtttgtttaagtcacttgagaaatttgtggcattcatggtttttgtatggtgttgttgtaatatataaagaattgtaata 8212808  T
Q  214 tattatt 220  Q
    |||||||    
T  8212809 tattatt 8212815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 212 - 351
Target Start/End: Original strand, 8213409 - 8213548
Alignment:
Q  212 tatattattttatttgtaggttcatgaaaaatatataaattacatgcaaacttaaaacaaaaccaatattttcacaagaaatatagtcaagtctataaac 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8213409 tatattattttatttgtaggttcatgaaaaatatataaattacatgcaaacttaaaacaaaaccaatattttcacaagaaacatagtcaagtctataaac 8213508  T
Q  312 acattagcgcagtagaaagagcggacagacgagcacggga 351  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  8213509 acattagcgcagtagaaagagcggacagacgggcacggga 8213548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 313 - 354
Target Start/End: Complemental strand, 21349456 - 21349415
Alignment:
Q  313 cattagcgcagtagaaagagcggacagacgagcacgggagtg 354  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  21349456 cattagcgcagtagaaagagcggacagacgggcacgggagtg 21349415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 347
Target Start/End: Complemental strand, 22643690 - 22643653
Alignment:
Q  310 acacattagcgcagtagaaagagcggacagacgagcac 347  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  22643690 acacattagcgcagtagaaagagtggacagacgggcac 22643653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 347
Target Start/End: Complemental strand, 22643726 - 22643689
Alignment:
Q  310 acacattagcgcagtagaaagagcggacagacgagcac 347  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  22643726 acacgttagcgcagtagaaagagcggacagacgggcac 22643689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 315 - 348
Target Start/End: Complemental strand, 44967501 - 44967468
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacg 348  Q
    |||||||||||||||||||||||||||| |||||    
T  44967501 ttagcgcagtagaaagagcggacagacgggcacg 44967468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 315 - 355
Target Start/End: Complemental strand, 8223786 - 8223746
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    |||| ||||||||||||||||||||| | ||||||||||||    
T  8223786 ttagtgcagtagaaagagcggacagaagggcacgggagtgc 8223746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 315 - 355
Target Start/End: Original strand, 16047108 - 16047148
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    |||||||||||||||||||||||||||  |||||| |||||    
T  16047108 ttagcgcagtagaaagagcggacagacaggcacggaagtgc 16047148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 314 - 354
Target Start/End: Complemental strand, 23120579 - 23120539
Alignment:
Q  314 attagcgcagtagaaagagcggacagacgagcacgggagtg 354  Q
    |||||||||||||||| |||||||||| | |||||||||||    
T  23120579 attagcgcagtagaaaaagcggacagatgggcacgggagtg 23120539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 271; Significance: 1e-151; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 14 - 348
Target Start/End: Original strand, 51425063 - 51425397
Alignment:
Q  14 aatatagaaacaaagccacatagtgggatgaaaagaccaagtagtacgaggatgaatatacatgctcaagtattatgacacacaatttggaacagtccat 113  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  51425063 aatatagaaacaaagccacatagtgggatgaaaagatcaagtagtacaaggatgaatatacattctcaagtattatgacacacaatttggaaaagtccat 51425162  T
Q  114 aaattatggttactatttttgtttgtttaagtcactcgagaaatttatggctttcatggtttttgtatggtgttgttgtaatatataaagaattgtaata 213  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||  ||| || ||| |||||||||||||||||||||||||||||| || |||||||    
T  51425163 aaattatggttaccatttttgtttgtttaagtcactcgagaaatttgcggcctttatgatttttgtatggtgttgttgtaatatataaataagtgtaata 51425262  T
Q  214 tattattttatttgtaggttcatgaaaaatatataaattacatgcaaacttaaaacaaaaccaatattttcacaagaaatatagtcaagtctataaacac 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  51425263 tattattttatttgtaggttcatgaaaaatatataaattacatgcaaacttaaaacaaaatcaatattttaacaagaaatatagtcaagtctataaacac 51425362  T
Q  314 attagcgcagtagaaagagcggacagacgagcacg 348  Q
    |||||| |||||||||||||||||||||| |||||    
T  51425363 attagcacagtagaaagagcggacagacgggcacg 51425397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 355
Target Start/End: Original strand, 9767934 - 9767974
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  9767934 ttagcgcagtagaaagagcggacagacgggcacgggagtgc 9767974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 355
Target Start/End: Complemental strand, 53157355 - 53157295
Alignment:
Q  295 tagtcaagtctataaacacattagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    |||| |||| |||| | ||||||||||||||||||||||||||||||| ||||| ||||||    
T  53157355 tagtaaagtatatagatacattagcgcagtagaaagagcggacagacgggcacgagagtgc 53157295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 315 - 355
Target Start/End: Complemental strand, 11028127 - 11028087
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    ||||||||||||||| |||||||||||| ||||||||||||    
T  11028127 ttagcgcagtagaaaaagcggacagacgggcacgggagtgc 11028087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 315 - 355
Target Start/End: Complemental strand, 15212793 - 15212753
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    ||||||||||||||| |||||||||||| ||||||||||||    
T  15212793 ttagcgcagtagaaaaagcggacagacgggcacgggagtgc 15212753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 315 - 355
Target Start/End: Complemental strand, 15252012 - 15251972
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    ||||||||||||||| |||||||||||| ||||||||||||    
T  15252012 ttagcgcagtagaaaaagcggacagacgggcacgggagtgc 15251972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 355
Target Start/End: Original strand, 41935248 - 41935284
Alignment:
Q  319 cgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    |||||||||||||||||||||||| ||||||||||||    
T  41935248 cgcagtagaaagagcggacagacgggcacgggagtgc 41935284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 315 - 355
Target Start/End: Complemental strand, 46124084 - 46124044
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    ||||||||||||||| |||||||||||| ||||||||||||    
T  46124084 ttagcgcagtagaaaaagcggacagacgggcacgggagtgc 46124044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 312 - 355
Target Start/End: Original strand, 18740866 - 18740909
Alignment:
Q  312 acattagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    ||||||||||| ||||||||||||||||||| |||||| |||||    
T  18740866 acattagcgcattagaaagagcggacagacgcgcacggaagtgc 18740909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 315 - 355
Target Start/End: Original strand, 6079881 - 6079921
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    ||||||||||||||| |||||||||||| |||||| |||||    
T  6079881 ttagcgcagtagaaaaagcggacagacgggcacggaagtgc 6079921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 175; Significance: 6e-94; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 175; E-Value: 6e-94
Query Start/End: Original strand, 375 - 589
Target Start/End: Original strand, 3966913 - 3967126
Alignment:
Q  375 aatgttaaaataattatataaatcattatataagtttttaaaataagagaaatgctagaaacacaattttcttactcgacacattcttcaaccaattcat 474  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3966913 aatgttaaaataattgtataa-tcattatataagtttttaaaataagagaaatgctagcaacacaattttcttactcgacacattcttcaaccaattcat 3967011  T
Q  475 ggtgtagatgtccttcttctgctctacccttggagaatactgtcaagattcatgttggtggtaactagtttactatcatggaagatcaagatttgattga 574  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||| ||||    
T  3967012 ggtgtagatgtccttcttctgctctacccttggagaatactgtcaagattaatgttggtggtagctagtttacaatcatggaagatcaagatttggttga 3967111  T
Q  575 actatgtacaattat 589  Q
    | ||||| |||||||    
T  3967112 attatgttcaattat 3967126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 7054303 - 7054103
Alignment:
Q  14 aatatagaaacaaagccacatagtgggatgaaaagaccaagtagtacgaggatgaatatacatgctcaagtattatgacacacaatttggaacagtccat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7054303 aatatagaaacaaagccacatagtgggatgaaaagaccaagtagtacgaggatgaatatacatgctcaagtattatgacacacaatttggaacagtccat 7054204  T
Q  114 aaattatggttactatttttgtttgtttaagtcactcgagaaatttatggctttcatggtttttgtatggtgttgttgtaatatataaagaattgtaata 213  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||| || ||||||||| | ||||||||||||||||||||||| |||||||||    
T  7054203 aaattatggttaccatttttgtttgtttaagtcactcgagaaatttgtggccttgatggtttttttttggtgttgttgtaatatataaaggattgtaata 7054104  T
Q  214 t 214  Q
    |    
T  7054103 t 7054103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 14 - 193
Target Start/End: Complemental strand, 1702444 - 1702263
Alignment:
Q  14 aatatagaaacaaagccacatagtgggatgaaaagaccaagtagtacgaggatga--atatacatgctcaagtattatgacacacaatttggaacagtcc 111  Q
    ||||| ||||||||||||| |||| |||||||||| ||||||||  || ||||||  ||||||||||||||||||||||||||||||||||||| |||||    
T  1702444 aatatggaaacaaagccacgtagtaggatgaaaaggccaagtagagcggggatgattatatacatgctcaagtattatgacacacaatttggaatagtcc 1702345  T
Q  112 ataaattatggttactatttttgtttgtttaagtcactcgagaaatttatggctttcatggtttttgtatggtgttgttgta 193  Q
      |||| |||||||| | ||||||||||||||||||| |||||||||| |||| |||||||| ||||| ||||| |||||||    
T  1702344 caaaataatggttaccagttttgtttgtttaagtcacacgagaaatttgtggcattcatggtctttgtttggtggtgttgta 1702263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 379 - 547
Target Start/End: Complemental strand, 3823833 - 3823666
Alignment:
Q  379 ttaaaataattatataaatcattatataagtttttaaaataagagaaatgctagaaacacaattttcttactcgacacattcttcaaccaattcatggtg 478  Q
    ||||||||||| ||||| ||| |||| ||||||| ||||||||| || |||||| ||| ||||||| |||||||||||||||||||| || |||||||||    
T  3823833 ttaaaataattgtataa-tcactatacaagttttcaaaataagataattgctagcaacccaatttttttactcgacacattcttcaatcagttcatggtg 3823735  T
Q  479 tagatgtccttcttctgctctacccttggagaatactgtcaagattcatgttggtggtaactagtttac 547  Q
    ||||||||||||||||  |||||| ||||||||||||||||||||| |||||||||| | |||||||||    
T  3823734 tagatgtccttcttctattctacctttggagaatactgtcaagatttatgttggtggaagctagtttac 3823666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 14 - 193
Target Start/End: Complemental strand, 9991096 - 9990915
Alignment:
Q  14 aatatagaaacaaagccacatagtgggatgaaaagaccaagtagtacgaggatga--atatacatgctcaagtattatgacacacaatttggaacagtcc 111  Q
    ||||| ||||||||||||| |||| |||||||||| ||||||||  || ||||||  ||||||||||||||||||||||||| ||||||||||| |||||    
T  9991096 aatatggaaacaaagccacgtagttggatgaaaaggccaagtagagcggggatgattatatacatgctcaagtattatgacaaacaatttggaatagtcc 9990997  T
Q  112 ataaattatggttactatttttgtttgtttaagtcactcgagaaatttatggctttcatggtttttgtatggtgttgttgta 193  Q
      |||| ||| |||  ||||||||||||||||||||| |||||||||| |||| |||||||| ||||| ||||| |||||||    
T  9990996 caaaataatgattatcatttttgtttgtttaagtcacacgagaaatttgtggccttcatggtctttgtttggtggtgttgta 9990915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 196 - 286
Target Start/End: Complemental strand, 7054049 - 7053959
Alignment:
Q  196 atataaagaattgtaatatattattttatttgtaggttcatgaaaaatatataaattacatgcaaacttaaaacaaaaccaatattttcac 286  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  7054049 atataaggaattgtaatatattattttatttgtaggtttatgaaaaatatataaattacatgcaaacttaaaacaaaaacaatattttcac 7053959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 14 - 111
Target Start/End: Complemental strand, 16613447 - 16613348
Alignment:
Q  14 aatatagaaacaaagccacatagtgggatgaaaagaccaagtagtacgaggatga--atatacatgctcaagtattatgacacacaatttggaacagtcc 111  Q
    ||||| ||||||||||||| |||| |||||||||||||||||||| || ||||||  |||||||| |||||||||||||||||||||||||||| |||||    
T  16613447 aatatggaaacaaagccacgtagtaggatgaaaagaccaagtagtgcggggatgattatatacattctcaagtattatgacacacaatttggaatagtcc 16613348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 355
Target Start/End: Original strand, 43593848 - 43593888
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  43593848 ttagcgcagtagaaagagcggacagacgggcacgggagtgc 43593888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 355
Target Start/End: Complemental strand, 50377378 - 50377342
Alignment:
Q  319 cgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    |||||||||||||||||||||||| ||||||||||||    
T  50377378 cgcagtagaaagagcggacagacgggcacgggagtgc 50377342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 312 - 342
Target Start/End: Original strand, 13022599 - 13022629
Alignment:
Q  312 acattagcgcagtagaaagagcggacagacg 342  Q
    |||||||||||||||||||||||||||||||    
T  13022599 acattagcgcagtagaaagagcggacagacg 13022629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 313 - 355
Target Start/End: Complemental strand, 13757193 - 13757151
Alignment:
Q  313 cattagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    |||||| ||||||||||||||| ||||||| ||||||||||||    
T  13757193 cattagtgcagtagaaagagcgaacagacgggcacgggagtgc 13757151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 315 - 348
Target Start/End: Original strand, 9296849 - 9296882
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacg 348  Q
    |||||||||||||||||||||||||||| |||||    
T  9296849 ttagcgcagtagaaagagcggacagacgggcacg 9296882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 315 - 348
Target Start/End: Complemental strand, 42563632 - 42563599
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacg 348  Q
    ||||||||||||||| ||||||||||||||||||    
T  42563632 ttagcgcagtagaaaaagcggacagacgagcacg 42563599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 315 - 348
Target Start/End: Complemental strand, 52374312 - 52374279
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacg 348  Q
    |||||||||||||||||||||||||||| |||||    
T  52374312 ttagcgcagtagaaagagcggacagacgggcacg 52374279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 315 - 351
Target Start/End: Original strand, 18811329 - 18811365
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacggga 351  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  18811329 ttagcgcagtagaaagagtggacagacgggcacggga 18811365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 163; Significance: 9e-87; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 163; E-Value: 9e-87
Query Start/End: Original strand, 14 - 200
Target Start/End: Complemental strand, 12146 - 11960
Alignment:
Q  14 aatatagaaacaaagccacatagtgggatgaaaagaccaagtagtacgaggatgaatatacatgctcaagtattatgacacacaatttggaacagtccat 113  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  12146 aatatagaaacaaagccacatagttggatgaaaagaccaagtagtacgaggatgaatatacatgctcaagtattattacacacaatttggaacagtccat 12047  T
Q  114 aaattatggttactatttttgtttgtttaagtcactcgagaaatttatggctttcatggtttttgtatggtgttgttgtaatatata 200  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||    
T  12046 aaattatggttaccatttttgtttgtttaagtcactcgagaaatttgtggccttcatggtttttgtatggtgttgttgtaatctata 11960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 152; Significance: 3e-80; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 14 - 197
Target Start/End: Original strand, 38981173 - 38981356
Alignment:
Q  14 aatatagaaacaaagccacatagtgggatgaaaagaccaagtagtacgaggatgaatatacatgctcaagtattatgacacacaatttggaacagtccat 113  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  38981173 aatatagaaacaaagccgcatagtgggatgaaaagaccaagtagtacgaggatgaatatacatgctcaagtattatgacacacaatttggaacaatccat 38981272  T
Q  114 aaattatggttactatttttgtttgtttaagtcactcgagaaatttatggctttcatggtttttgtatggtgttgttgtaatat 197  Q
    |||| |||||||| |||||||||||||||||||||||||||||||| |||| |||| ||||||||| |||||||||||||||||    
T  38981273 aaataatggttaccatttttgtttgtttaagtcactcgagaaatttgtggccttcacggtttttgtttggtgttgttgtaatat 38981356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 196 - 341
Target Start/End: Original strand, 38981410 - 38981555
Alignment:
Q  196 atataaagaattgtaatatattattttatttgtaggttcatgaaaaatatataaattacatgcaaacttaaaacaaaaccaatattttcacaagaaatat 295  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  38981410 atataaggaattgtaatatattattttatttgtaggttcatgaaaaatatataaattacatgcaaacttaaaacaaaaccaatattttcacaagaaacat 38981509  T
Q  296 agtcaagtctataaacacattagcgcagtagaaagagcggacagac 341  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||    
T  38981510 agtcaagtctataaacacgttagcgcaatagaaagagcggacagac 38981555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 101 - 193
Target Start/End: Complemental strand, 24867135 - 24867045
Alignment:
Q  101 tggaacagtccataaattatggttactatttttgtttgtttaagtcactcgagaaatttatggctttcatggtttttgtatggtgttgttgta 193  Q
    ||||| |||||  ||||||| ||||| ||||||||||||||| |||||| ||||||||| |||| |  ||||||||||| |||||||||||||    
T  24867135 tggaatagtcccaaaattatagttaccatttttgtttgtttatgtcacttgagaaatttgtggcct--atggtttttgtttggtgttgttgta 24867045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 315 - 355
Target Start/End: Original strand, 2707137 - 2707177
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    ||||||||||||||| |||||||||||| ||||||||||||    
T  2707137 ttagcgcagtagaaaaagcggacagacgggcacgggagtgc 2707177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 315 - 355
Target Start/End: Original strand, 24079511 - 24079551
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    ||||||||||||||||||||||||||||  |||||||||||    
T  24079511 ttagcgcagtagaaagagcggacagacggacacgggagtgc 24079551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 315 - 355
Target Start/End: Original strand, 31898587 - 31898627
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    |||||||||||||||||||||| ||||| ||||||||||||    
T  31898587 ttagcgcagtagaaagagcggatagacgggcacgggagtgc 31898627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 338
Target Start/End: Complemental strand, 23459255 - 23459204
Alignment:
Q  287 aagaaatatagtcaagtctataaacacattagcgcagtagaaagagcggaca 338  Q
    |||||| |||||||||| |||| | || ||||||||||||||||||||||||    
T  23459255 aagaaacatagtcaagtatatacatacgttagcgcagtagaaagagcggaca 23459204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 315 - 354
Target Start/End: Complemental strand, 25417136 - 25417097
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacgggagtg 354  Q
    |||||||||||||||||||||||||||| |||| ||||||    
T  25417136 ttagcgcagtagaaagagcggacagacgggcacaggagtg 25417097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 347
Target Start/End: Complemental strand, 25330933 - 25330896
Alignment:
Q  310 acacattagcgcagtagaaagagcggacagacgagcac 347  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  25330933 acacattagcgcagtagaaaaagcggacagacgggcac 25330896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 45073860 - 45073807
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacgggagtgctcggacgctagta 368  Q
    |||||||||| |||| |||||||||||| |||||||||||   |||||||||||    
T  45073860 ttagcgcagtggaaaaagcggacagacgggcacgggagtgtctggacgctagta 45073807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 24867173 - 24867137
Alignment:
Q  22 aacaaagccacatagtgggatgaaaagaccaagtagt 58  Q
    |||||||||| |||||||||||||||| |||||||||    
T  24867173 aacaaagccaaatagtgggatgaaaaggccaagtagt 24867137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 314 - 342
Target Start/End: Complemental strand, 44481367 - 44481339
Alignment:
Q  314 attagcgcagtagaaagagcggacagacg 342  Q
    |||||||||||||||||||||||||||||    
T  44481367 attagcgcagtagaaagagcggacagacg 44481339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 149; Significance: 2e-78; HSPs: 2)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 13833 - 14033
Alignment:
Q  14 aatatagaaacaaagccacatagtgggatgaaaagaccaagtagtacgaggatgaatatacatgctcaagtattatgacacacaatttggaacagtccat 113  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||  ||||||||||||||||||||||||| ||||  |    
T  13833 aatatagaaacaaagccacatagtgggatgaaaagacctagtagtacgagaatgaatatacatgcggaagtattatgacacacaatttggaagagtctgt 13932  T
Q  114 aaattatggttactatttttgtttgtttaagtcactcgagaaatttatggctttcatggtttttgtatggtgttgttgtaatatataaagaattgtaata 213  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||| |||  |||||||||||||| |||||||||||||||||||||||||||||||||    
T  13933 aaattatggttaccatttttgtttgtttaagtcactcaagaaatttgtggacttcatggtttttgtttggtgttgttgtaatatataaagaattgtaata 14032  T
Q  214 t 214  Q
    |    
T  14033 t 14033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 196 - 355
Target Start/End: Original strand, 14087 - 14248
Alignment:
Q  196 atataaagaattgtaatatattattttatttgtaggttcatgaaaaatatataaattacatgcaaacttaaaacaaaaccaatattttcacaagaa--at 293  Q
    |||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||    
T  14087 atataaggaactgtaatatattattttatttgtaggttgatgaaaaatatataaattacatgcaaacttaaaacaaaaccaatattttcacatgaaacat 14186  T
Q  294 atagtcaagtctataaacacattagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    || |||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||    
T  14187 attgtcaagtctataaacacattagcgtagtagaaagagcggacagacgggcacgagagtgc 14248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 112; Significance: 3e-56; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 204 - 347
Target Start/End: Original strand, 13718161 - 13718304
Alignment:
Q  204 aattgtaatatattattttatttgtaggttcatgaaaaatatataaattacatgcaaacttaaaacaaaaccaatattttcacaagaaatatagtcaagt 303  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||    
T  13718161 aattgtaatatattattttatttgtaggttcaagaaaaatatataaattacatgcaaacttgaaacaaaacaaatattttcacaagaaacatagtcaagt 13718260  T
Q  304 ctataaacacattagcgcagtagaaagagcggacagacgagcac 347  Q
    ||||| |||||||||||||||||||| | |||||||||| ||||    
T  13718261 ctatacacacattagcgcagtagaaaaaacggacagacgggcac 13718304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 355
Target Start/End: Original strand, 15907095 - 15907135
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  15907095 ttagcgcagtagaaagagcggacagacgggcacgggagtgc 15907135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 355
Target Start/End: Original strand, 21393428 - 21393468
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  21393428 ttagcgcagtagaaagagcggacagacgggcacgggagtgc 21393468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 355
Target Start/End: Original strand, 23160781 - 23160821
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  23160781 ttagcgcagtagaaagagcggacagacgggcacgggagtgc 23160821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 315 - 355
Target Start/End: Complemental strand, 7456898 - 7456858
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    |||||||||||||||||||| ||||||||||| ||||||||    
T  7456898 ttagcgcagtagaaagagcgaacagacgagcaggggagtgc 7456858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 315 - 355
Target Start/End: Complemental strand, 8848136 - 8848096
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    ||||||||||||||| |||||||||||| ||||||||||||    
T  8848136 ttagcgcagtagaaaaagcggacagacgggcacgggagtgc 8848096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 315 - 355
Target Start/End: Original strand, 19382999 - 19383039
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    ||||||||||||||| |||||||||||| ||||||||||||    
T  19382999 ttagcgcagtagaaaaagcggacagacgggcacgggagtgc 19383039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 315 - 355
Target Start/End: Complemental strand, 21683227 - 21683187
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    |||||||| ||||||||||||||||||| ||||||||||||    
T  21683227 ttagcgcaatagaaagagcggacagacgggcacgggagtgc 21683187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 305 - 355
Target Start/End: Original strand, 2666136 - 2666186
Alignment:
Q  305 tataaacacattagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    |||||| || ||||||||||||||| | |||||||||| ||||||||||||    
T  2666136 tataaatacgttagcgcagtagaaaaaacggacagacgggcacgggagtgc 2666186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 313 - 355
Target Start/End: Original strand, 18801474 - 18801516
Alignment:
Q  313 cattagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    |||||||| ||||||||||||| ||||||| ||||||||||||    
T  18801474 cattagcgtagtagaaagagcgaacagacgggcacgggagtgc 18801516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 315 - 353
Target Start/End: Original strand, 23094610 - 23094648
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacgggagt 353  Q
    |||||||||||||||||||||||||||| | ||||||||    
T  23094610 ttagcgcagtagaaagagcggacagacgggaacgggagt 23094648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 315 - 349
Target Start/End: Complemental strand, 31569364 - 31569330
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacgg 349  Q
    |||||||||||||||||||||||||||| ||||||    
T  31569364 ttagcgcagtagaaagagcggacagacgggcacgg 31569330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 355
Target Start/End: Original strand, 19002764 - 19002809
Alignment:
Q  310 acacattagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    |||||||||||| ||||||| |||||||||||| | ||||||||||    
T  19002764 acacattagcgcggtagaaaaagcggacagacgggtacgggagtgc 19002809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 315 - 355
Target Start/End: Original strand, 17102636 - 17102676
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    |||||||||||||||||||||||||| | ||| ||||||||    
T  17102636 ttagcgcagtagaaagagcggacagatgggcatgggagtgc 17102676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 315 - 355
Target Start/End: Original strand, 17724582 - 17724622
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    ||||||||||||||| |||||||||||| ||| ||||||||    
T  17724582 ttagcgcagtagaaaaagcggacagacgggcatgggagtgc 17724622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 310 - 354
Target Start/End: Complemental strand, 18175972 - 18175928
Alignment:
Q  310 acacattagcgcagtagaaagagcggacagacgagcacgggagtg 354  Q
    |||| |||||| ||||||||||||||||||||| ||||| |||||    
T  18175972 acacgttagcgtagtagaaagagcggacagacgggcacgagagtg 18175928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 315 - 355
Target Start/End: Complemental strand, 19214837 - 19214797
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    ||||||| ||||||| |||||||||||| ||||||||||||    
T  19214837 ttagcgcggtagaaaaagcggacagacgggcacgggagtgc 19214797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 315 - 355
Target Start/End: Original strand, 20882000 - 20882040
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    |||||||| ||||||||||||||||||  ||||||||||||    
T  20882000 ttagcgcaatagaaagagcggacagacaggcacgggagtgc 20882040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 22291703 - 22291735
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcac 347  Q
    |||||||||||||||||||||||||||| ||||    
T  22291703 ttagcgcagtagaaagagcggacagacgggcac 22291735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 315 - 355
Target Start/End: Original strand, 31877215 - 31877255
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    ||||||||||||||||||||||||||||   ||||||||||    
T  31877215 ttagcgcagtagaaagagcggacagacggatacgggagtgc 31877255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 315 - 355
Target Start/End: Complemental strand, 32616954 - 32616914
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    |||||| |||||||| |||||||||||| ||||||||||||    
T  32616954 ttagcgtagtagaaaaagcggacagacgggcacgggagtgc 32616914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 298 - 355
Target Start/End: Complemental strand, 46357 - 46300
Alignment:
Q  298 tcaagtctataaacacattagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    |||||| |||||| || ||||||||||||||| |||||||||||| ||||||||||||    
T  46357 tcaagtatataaatacgttagcgcagtagaaaaagcggacagacgggcacgggagtgc 46300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000004; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 315 - 356
Target Start/End: Complemental strand, 3568566 - 3568525
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacgggagtgct 356  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  3568566 ttagcgcagtagaaagagcggacagacgggcacgggagtgct 3568525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 315 - 355
Target Start/End: Complemental strand, 18535719 - 18535678
Alignment:
Q  315 ttagcgcagtagaaagagcggacaga-cgagcacgggagtgc 355  Q
    |||||||||||||||||||||||||| || ||||||||||||    
T  18535719 ttagcgcagtagaaagagcggacagaccgggcacgggagtgc 18535678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 319 - 351
Target Start/End: Complemental strand, 1966361 - 1966329
Alignment:
Q  319 cgcagtagaaagagcggacagacgagcacggga 351  Q
    |||||||||||||||||||||||| ||||||||    
T  1966361 cgcagtagaaagagcggacagacgggcacggga 1966329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 315 - 355
Target Start/End: Original strand, 13796591 - 13796631
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    |||||||| ||||||||||||||||||| ||||| ||||||    
T  13796591 ttagcgcaatagaaagagcggacagacgtgcacgagagtgc 13796631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 323 - 355
Target Start/End: Original strand, 39703135 - 39703167
Alignment:
Q  323 gtagaaagagcggacagacgagcacgggagtgc 355  Q
    |||||||||||||||||||| ||||||||||||    
T  39703135 gtagaaagagcggacagacgggcacgggagtgc 39703167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000004; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 310 - 355
Target Start/End: Original strand, 27032678 - 27032723
Alignment:
Q  310 acacattagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||    
T  27032678 acacgttagcgcagtagaaagagcggacagacgggcacgggagtgc 27032723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 310 - 355
Target Start/End: Complemental strand, 22362618 - 22362573
Alignment:
Q  310 acacattagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    |||| ||||||||||||||| |||||||||||| ||||||||||||    
T  22362618 acacgttagcgcagtagaaaaagcggacagacgggcacgggagtgc 22362573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 355
Target Start/End: Complemental strand, 21112763 - 21112727
Alignment:
Q  319 cgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    |||||||||||||||||||||||| ||||||||||||    
T  21112763 cgcagtagaaagagcggacagacgggcacgggagtgc 21112727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 315 - 355
Target Start/End: Complemental strand, 38925493 - 38925453
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    |||||| ||||||||||||||||||||| ||||||||||||    
T  38925493 ttagcgtagtagaaagagcggacagacgggcacgggagtgc 38925453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 315 - 355
Target Start/End: Original strand, 42883075 - 42883115
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    ||||||||||| |||||||||||||||| ||||||||||||    
T  42883075 ttagcgcagtaaaaagagcggacagacgggcacgggagtgc 42883115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 315 - 348
Target Start/End: Complemental strand, 35328866 - 35328833
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacg 348  Q
    |||||||||||||||||||||||||||| |||||    
T  35328866 ttagcgcagtagaaagagcggacagacgggcacg 35328833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 310 - 354
Target Start/End: Original strand, 12563061 - 12563105
Alignment:
Q  310 acacattagcgcagtagaaagagcggacagacgagcacgggagtg 354  Q
    |||||| ||||||||||||| | ||||||||||||||| ||||||    
T  12563061 acacatcagcgcagtagaaaaaacggacagacgagcacaggagtg 12563105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 355
Target Start/End: Original strand, 52540 - 52580
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  52540 ttagcgcagtagaaagagcggacagacgggcacgggagtgc 52580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000001; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 355
Target Start/End: Original strand, 15723293 - 15723333
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  15723293 ttagcgcagtagaaagagcggacagacgggcacgggagtgc 15723333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 355
Target Start/End: Original strand, 44201674 - 44201714
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  44201674 ttagcgcagtagaaagagcggacagacgggcacgggagtgc 44201714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 315 - 354
Target Start/End: Complemental strand, 2248098 - 2248059
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacgggagtg 354  Q
    ||||||||||||||||||||||||||||  ||||||||||    
T  2248098 ttagcgcagtagaaagagcggacagacggacacgggagtg 2248059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 315 - 354
Target Start/End: Original strand, 25614001 - 25614040
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacgggagtg 354  Q
    ||||||||||||||||||| |||||||| |||||||||||    
T  25614001 ttagcgcagtagaaagagcagacagacgggcacgggagtg 25614040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 320 - 355
Target Start/End: Original strand, 42958706 - 42958741
Alignment:
Q  320 gcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    ||||||||||||||||||||||| ||||||||||||    
T  42958706 gcagtagaaagagcggacagacgggcacgggagtgc 42958741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 315 - 358
Target Start/End: Complemental strand, 46351946 - 46351903
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacgggagtgctcg 358  Q
    |||||||| ||||||||||||||||| | |||||||||||||||    
T  46351946 ttagcgcaatagaaagagcggacagatgggcacgggagtgctcg 46351903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 315 - 355
Target Start/End: Original strand, 19193809 - 19193849
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    |||||||||||||||||||||||||||  |||| |||||||    
T  19193809 ttagcgcagtagaaagagcggacagacaggcacaggagtgc 19193849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 315 - 351
Target Start/End: Complemental strand, 8994 - 8958
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacggga 351  Q
    |||||||||||||||||||||||||||| ||||||||    
T  8994 ttagcgcagtagaaagagcggacagacgggcacggga 8958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 315 - 355
Target Start/End: Original strand, 791 - 831
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    ||||||||||||||| |||||||||||| ||||||||||||    
T  791 ttagcgcagtagaaaaagcggacagacgggcacgggagtgc 831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0281 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0281
Description:

Target: scaffold0281; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 315 - 353
Target Start/End: Original strand, 4589 - 4627
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacgggagt 353  Q
    |||||||||||||||||| ||||||||| ||||||||||    
T  4589 ttagcgcagtagaaagagtggacagacgggcacgggagt 4627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 313 - 355
Target Start/End: Complemental strand, 163193 - 163151
Alignment:
Q  313 cattagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    |||||||||||||||||||||||||||| | | ||||||||||    
T  163193 cattagcgcagtagaaagagcggacagatgggtacgggagtgc 163151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0283 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 315 - 348
Target Start/End: Complemental strand, 13635 - 13602
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacg 348  Q
    |||||||||||||||||||||||||||| |||||    
T  13635 ttagcgcagtagaaagagcggacagacgggcacg 13602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 355
Target Start/End: Complemental strand, 102285 - 102248
Alignment:
Q  318 gcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    ||||||||||||||||||||| ||| ||||||||||||    
T  102285 gcgcagtagaaagagcggacaaacgggcacgggagtgc 102248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0557 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 315 - 355
Target Start/End: Complemental strand, 6491 - 6451
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    |||||||| ||||||||||||||||||  ||||||||||||    
T  6491 ttagcgcaatagaaagagcggacagacaggcacgggagtgc 6451  T

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Target: scaffold0553 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 315 - 355
Target Start/End: Complemental strand, 6605 - 6565
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    ||||||||||||||| |||||||||||| | ||||||||||    
T  6605 ttagcgcagtagaaaaagcggacagacgggtacgggagtgc 6565  T

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Target: scaffold0214 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 315 - 355
Target Start/End: Original strand, 29235 - 29275
Alignment:
Q  315 ttagcgcagtagaaagagcggacagacgagcacgggagtgc 355  Q
    ||||||| ||||||||||||||||||||  |||||||||||    
T  29235 ttagcgcggtagaaagagcggacagacggacacgggagtgc 29275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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