View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7395_high_1 (Length: 810)

Name: NF7395_high_1
Description: NF7395
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7395_high_1
NF7395_high_1
[»] chr4 (19 HSPs)
chr4 (19-690)||(22054918-22055605)
chr4 (265-346)||(17729420-17729500)
chr4 (271-346)||(23225859-23225933)
chr4 (265-348)||(43722757-43722839)
chr4 (265-343)||(8027384-8027461)
chr4 (266-348)||(8415483-8415564)
chr4 (269-346)||(4916149-4916225)
chr4 (268-348)||(21318243-21318322)
chr4 (265-312)||(18903745-18903791)
chr4 (265-348)||(54500561-54500643)
chr4 (265-347)||(7230273-7230354)
chr4 (293-347)||(8494980-8495034)
chr4 (265-347)||(11949750-11949831)
chr4 (265-347)||(42845018-42845099)
chr4 (268-346)||(43034332-43034409)
chr4 (300-341)||(5179909-5179950)
chr4 (290-347)||(5360291-5360348)
chr4 (290-347)||(33900735-33900792)
chr4 (296-345)||(39842029-39842078)
[»] chr8 (8 HSPs)
chr8 (265-346)||(44293569-44293649)
chr8 (265-347)||(29376894-29376975)
chr8 (278-347)||(33373752-33373820)
chr8 (265-347)||(7996933-7997014)
chr8 (288-342)||(15188897-15188951)
chr8 (265-346)||(18533663-18533743)
chr8 (265-346)||(19163523-19163603)
chr8 (278-347)||(39821877-39821945)
[»] chr3 (15 HSPs)
chr3 (265-346)||(7464478-7464558)
chr3 (265-348)||(8127455-8127537)
chr3 (265-343)||(2186414-2186491)
chr3 (288-347)||(17588355-17588414)
chr3 (269-343)||(41442918-41442990)
chr3 (265-341)||(10922295-10922370)
chr3 (265-340)||(25441487-25441561)
chr3 (296-347)||(53633634-53633685)
chr3 (265-347)||(1149056-1149137)
chr3 (265-347)||(21160045-21160125)
chr3 (265-347)||(33633305-33633386)
chr3 (265-347)||(51882187-51882268)
chr3 (307-341)||(54897319-54897353)
chr3 (300-345)||(11436502-11436547)
chr3 (315-348)||(51250269-51250302)
[»] chr5 (14 HSPs)
chr5 (266-346)||(36321481-36321561)
chr5 (265-341)||(11647196-11647271)
chr5 (265-343)||(11318182-11318260)
chr5 (265-341)||(16579361-16579436)
chr5 (265-312)||(1809072-1809118)
chr5 (288-347)||(3389155-3389214)
chr5 (268-347)||(6489000-6489078)
chr5 (265-347)||(5614758-5614838)
chr5 (268-346)||(15889405-15889482)
chr5 (268-346)||(29695009-29695086)
chr5 (265-347)||(37932323-37932404)
chr5 (294-347)||(689540-689593)
chr5 (265-342)||(11310438-11310514)
chr5 (315-348)||(40837939-40837972)
[»] chr1 (13 HSPs)
chr1 (265-346)||(8269355-8269435)
chr1 (265-349)||(14768797-14768881)
chr1 (296-348)||(30678830-30678882)
chr1 (289-349)||(52267755-52267815)
chr1 (265-348)||(1091171-1091253)
chr1 (280-343)||(3509942-3510005)
chr1 (265-347)||(6219850-6219930)
chr1 (300-347)||(31061924-31061971)
chr1 (265-347)||(1794589-1794670)
chr1 (297-347)||(18521240-18521290)
chr1 (288-346)||(30798756-30798814)
chr1 (265-342)||(29042535-29042611)
chr1 (265-346)||(33153867-33153947)
[»] chr7 (11 HSPs)
chr7 (265-348)||(7388026-7388108)
chr7 (265-347)||(37930037-37930118)
chr7 (269-346)||(5526719-5526795)
chr7 (271-348)||(34448603-34448679)
chr7 (268-347)||(5579686-5579764)
chr7 (268-347)||(27833391-27833469)
chr7 (288-346)||(7872757-7872815)
chr7 (316-346)||(35571970-35572000)
chr7 (268-346)||(40187626-40187703)
chr7 (265-343)||(44651498-44651575)
chr7 (274-347)||(46220947-46221018)
[»] chr6 (9 HSPs)
chr6 (265-347)||(9977050-9977131)
chr6 (267-347)||(788859-788938)
chr6 (296-347)||(9987074-9987125)
chr6 (300-347)||(20208112-20208159)
chr6 (300-347)||(22102135-22102182)
chr6 (265-347)||(8138445-8138526)
chr6 (271-345)||(20744133-20744206)
chr6 (268-346)||(27834333-27834410)
chr6 (296-341)||(10497169-10497214)
[»] chr2 (10 HSPs)
chr2 (268-346)||(24592836-24592913)
chr2 (265-343)||(31815874-31815951)
chr2 (265-346)||(2256965-2257045)
chr2 (268-348)||(25561987-25562066)
chr2 (265-340)||(18324881-18324955)
chr2 (265-344)||(27412823-27412901)
chr2 (278-348)||(5676731-5676800)
chr2 (272-338)||(22359007-22359072)
chr2 (265-346)||(9383196-9383276)
chr2 (265-346)||(29798504-29798584)
[»] scaffold0050 (1 HSPs)
scaffold0050 (265-345)||(53367-53446)
[»] scaffold0262 (1 HSPs)
scaffold0262 (265-346)||(15917-15997)


Alignment Details
Target: chr4 (Bit Score: 474; Significance: 0; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 474; E-Value: 0
Query Start/End: Original strand, 19 - 690
Target Start/End: Complemental strand, 22055605 - 22054918
Alignment:
Q  19 acatcacattgagaggttattgaggggacataaaaatatcaaggtgcagctgcaaatttaatgcatacatctataataaggtgtaatgtcaagcnnnnnn 118  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  22055605 acattacattgagaggttactgaggggacataaaaatatcaaggtgcagctgcaaatttaatgcatacatctataataaggtgtaatgtcaagcaaaaaa 22055506  T
Q  119 ntagattagtaa---gtgagcagcaaaaccnnnnnnntta--tcatacatttaactaggtttactaagttcctgataataatattcaactatagaggaat 213  Q
     || ||||||||   |||||||||||||||         |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22055505 atacattagtaaacagtgagcagcaaaaccaaaaaaaaaaaatcatacatttaactaggtttactaagttcctgataataatattcaactatagaggaat 22055406  T
Q  214 tatataatagttataatacaatagtaggtttggatgcaataacnnnnnnnntttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaa 313  Q
    ||||||||||||||||||| |||||||||||||||||||||||        ||| | ||||||||| ||||||||||| |||||| ||||||||||||||    
T  22055405 tatataatagttataatacgatagtaggtttggatgcaataacaatttt--ttttttgtggtcaggatttgaacccccggatcttgcatatagtatgcaa 22055308  T
Q  314 ggtccttaccaactgagttaagttcacgaggacatccaataacaaatttaaaattgtatcacatgagcctttttattttgaccaatttaaattatgatct 413  Q
    | || ||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22055307 gatctttatcaactgagttaagctcacgaggacatgcaataacaaatttaaaattgtatcacatgagcctttttattttgaccaatttaaattatgatct 22055208  T
Q  414 attgagaaaattcagttttatatcatatatctcaaggttaacgatatagcaagccattcattattcattgtaatacgatttaaacaccatact------- 506  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||           
T  22055207 attgagaaaattcagttttatatcatatatctcaaggttaactatatagcaagccattcattattcattgtaatacgatttaaacaccatactttaatct 22055108  T
Q  507 ------tggttttgagtgtaggttatcgtgtattgcatcttggacgtcgttttcatcattttgatttttgttaatgaccagtgtggtgttcagatcatat 600  Q
          |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22055107 taagactggttttgagtgtaggttatcgtgtattgcatcttggacgtcattttcatcattttgatttttgttaatgaccagtgtggtgttcagatcatat 22055008  T
Q  601 tttgagttaaatatgcaattaatttgattactgtatccttagaaggctaattcaattacctacaactagtatgttcaacccgaagtctaa 690  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22055007 tttgagttaaatatgcaattaatttgattactgtatccttagaaggctaattcaattacctacaactagtatgttcagcccgaagtctaa 22054918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 265 - 346
Target Start/End: Complemental strand, 17729500 - 17729420
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggac 346  Q
    |||||||||||| ||||||||||||| ||| ||| |||||| |||||||||| | ||||||||||| |||||||||||||||    
T  17729500 tttgtggtggtcggggtttgaacccc-agaccttgcatatattatgcaaggttcataccaactgagctaagttcacgaggac 17729420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 271 - 346
Target Start/End: Complemental strand, 23225933 - 23225859
Alignment:
Q  271 gtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggac 346  Q
    |||||||||||||||||||| | ||||| |||||| |||| |  || | |||||||||||||||||||||||||||    
T  23225933 gtggtcagggtttgaaccccga-atcttgcatatattatgaattgttcctaccaactgagttaagttcacgaggac 23225859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 265 - 348
Target Start/End: Complemental strand, 43722839 - 43722757
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggacat 348  Q
    ||||||||| | ||||||||||||||  || |||||||||| ||||||  |||| |||||||||||||||  ||||||||||||    
T  43722839 tttgtggtgtttagggtttgaaccccg-gaccttacatatattatgcattgtccataccaactgagttaaactcacgaggacat 43722757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 265 - 343
Target Start/End: Original strand, 8027384 - 8027461
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgag 343  Q
    |||||||||||| |||||||||||||| |||||| |||||| ||||||   ||||||||||||||| |||  |||||||    
T  8027384 tttgtggtggtcggggtttgaaccccc-gatcttgcatatattatgcattatccttaccaactgagctaaactcacgag 8027461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 266 - 348
Target Start/End: Original strand, 8415483 - 8415564
Alignment:
Q  266 ttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggacat 348  Q
    |||||||||||||||||||||||    ||||||||||||| ||||||  |||| |||||||||| ||||| ||| ||||||||    
T  8415483 ttgtggtggtcagggtttgaaccttg-gatcttacatatattatgcattgtccataccaactgaattaagctcatgaggacat 8415564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 269 - 346
Target Start/End: Complemental strand, 4916225 - 4916149
Alignment:
Q  269 tggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggac 346  Q
    |||||| ||||||||||||||| | |||||||||||| ||||||  || |  |||||||||| |||||||||||||||    
T  4916225 tggtggccagggtttgaaccccaa-atcttacatatattatgcattgttcaaaccaactgagctaagttcacgaggac 4916149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 268 - 348
Target Start/End: Original strand, 21318243 - 21318322
Alignment:
Q  268 gtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggacat 348  Q
    ||||||||| ||||||||||||  ||| ||| |||||| ||||||  |||| |||||||||||||||| || |||||||||    
T  21318243 gtggtggtcggggtttgaaccct-agaccttgcatatattatgcattgtccctaccaactgagttaagctcgcgaggacat 21318322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 265 - 312
Target Start/End: Original strand, 18903745 - 18903791
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgca 312  Q
    |||||||||||||||||||||| ||||||| |||||||||| ||||||    
T  18903745 tttgtggtggtcagggtttgaa-ccccagaccttacatatattatgca 18903791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 265 - 348
Target Start/End: Complemental strand, 54500643 - 54500561
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggacat 348  Q
    |||||||||||||| ||||||| |||| || |||||||||| ||||||  |||  ||||||||||| |||| ||||||| ||||    
T  54500643 tttgtggtggtcagtgtttgaa-ccccggaccttacatatattatgcattgtctctaccaactgagctaagctcacgagaacat 54500561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 265 - 347
Target Start/End: Complemental strand, 7230354 - 7230273
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggaca 347  Q
    |||||||||| |  ||||||||||||  || ||| |||||| ||||||  |||||||||||||||| |||| |||||||||||    
T  7230354 tttgtggtggccgaggtttgaaccccg-gaccttgcatatattatgcattgtccttaccaactgagctaagctcacgaggaca 7230273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 293 - 347
Target Start/End: Complemental strand, 8495034 - 8494980
Alignment:
Q  293 gatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggaca 347  Q
    |||||| |||||| ||||||  |||| ||||||||||| ||||||||||||||||    
T  8495034 gatcttgcatatattatgcattgtccctaccaactgagctaagttcacgaggaca 8494980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 265 - 347
Target Start/End: Original strand, 11949750 - 11949831
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggaca 347  Q
    |||||||||||| ||||||||| |||| || ||| |||||| ||||||  |||| ||||||||||| |||| ||| |||||||    
T  11949750 tttgtggtggtcggggtttgaa-ccccggaccttgcatatattatgcattgtccataccaactgagctaagctcatgaggaca 11949831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 265 - 347
Target Start/End: Complemental strand, 42845099 - 42845018
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggaca 347  Q
    |||||||||||| | |||| ||||||  || ||| |||||| ||||||  |||||| |||||||||||||| |||||||||||    
T  42845099 tttgtggtggtcggagttttaaccccg-gaccttgcatatattatgcattgtcctttccaactgagttaagctcacgaggaca 42845018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 268 - 346
Target Start/End: Original strand, 43034332 - 43034409
Alignment:
Q  268 gtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggac 346  Q
    ||||||| | ||||||||||| | ||| ||| |||||| ||||||  |||| |||||||||||||||| ||||||||||    
T  43034332 gtggtggccggggtttgaacctc-agaccttgcatatattatgcattgtccataccaactgagttaagctcacgaggac 43034409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 300 - 341
Target Start/End: Original strand, 5179909 - 5179950
Alignment:
Q  300 catatagtatgcaaggtccttaccaactgagttaagttcacg 341  Q
    |||||| |||||||  ||||||||||||||||||||||||||    
T  5179909 catataatatgcaatatccttaccaactgagttaagttcacg 5179950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 290 - 347
Target Start/End: Original strand, 5360291 - 5360348
Alignment:
Q  290 ccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggaca 347  Q
    ||||| ||| |||| | |||||| | |||||||||||||||||||||||||| |||||    
T  5360291 ccagaccttgcatacattatgcatgatccttaccaactgagttaagttcacggggaca 5360348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 290 - 347
Target Start/End: Original strand, 33900735 - 33900792
Alignment:
Q  290 ccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggaca 347  Q
    ||||||||| |||||| ||||||  |||||||||||||||| |||||| ||| |||||    
T  33900735 ccagatcttgcatatattatgcattgtccttaccaactgagataagtttacggggaca 33900792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 296 - 345
Target Start/End: Original strand, 39842029 - 39842078
Alignment:
Q  296 cttacatatagtatgcaaggtccttaccaactgagttaagttcacgagga 345  Q
    |||||||||| ||||||  ||||||| ||||||||||||| |||||||||    
T  39842029 cttacatatattatgcattgtccttatcaactgagttaagatcacgagga 39842078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 265 - 346
Target Start/End: Complemental strand, 44293649 - 44293569
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggac 346  Q
    |||||||||||||||||| ||||||| |||||||||||||| ||||||  |||  ||||||||||| |||| ||||||||||    
T  44293649 tttgtggtggtcagggttcgaacccc-agatcttacatatattatgcattgtctataccaactgagctaagctcacgaggac 44293569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 265 - 347
Target Start/End: Complemental strand, 29376975 - 29376894
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggaca 347  Q
    |||||||||||| |||||||||| || ||| ||| |||||| || |||  |||| |||||||||||||||| |||||||||||    
T  29376975 tttgtggtggtcggggtttgaactcc-agaccttgcatatattacgcattgtccataccaactgagttaagctcacgaggaca 29376894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 278 - 347
Target Start/End: Original strand, 33373752 - 33373820
Alignment:
Q  278 gggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggaca 347  Q
    ||||||||||||| ||| |||||||||| |||| |  |||| |||||||||||||||| |||||||||||    
T  33373752 gggtttgaacccc-agaccttacatatattatgaattgtccataccaactgagttaaggtcacgaggaca 33373820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 265 - 347
Target Start/End: Complemental strand, 7997014 - 7996933
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggaca 347  Q
    |||||||||||| ||||||||| ||||||| ||| |||||| |||||   |||| ||||||||||| |||| |||| ||||||    
T  7997014 tttgtggtggtcggggtttgaa-ccccagaccttgcatatattatgcgttgtccataccaactgagctaagctcacaaggaca 7996933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 288 - 342
Target Start/End: Complemental strand, 15188951 - 15188897
Alignment:
Q  288 ccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacga 342  Q
    |||||||||||||||||| ||||||  |||| ||| |||||||||||| ||||||    
T  15188951 ccccagatcttacatatattatgcattgtccatactaactgagttaagctcacga 15188897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 346
Target Start/End: Complemental strand, 18533743 - 18533663
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggac 346  Q
    |||||||||||  |||||||||||||  |||||| |||||| ||||||  || |||||||||||||| ||| | ||||||||    
T  18533743 tttgtggtggttggggtttgaaccccg-gatcttgcatatattatgcattgttcttaccaactgagtcaagcttacgaggac 18533663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 346
Target Start/End: Original strand, 19163523 - 19163603
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggac 346  Q
    |||||||||||| ||||||||| |||| || ||| |||| | ||||||  |||| ||||||||||| |||| ||||||||||    
T  19163523 tttgtggtggtcggggtttgaa-ccccggaccttgcataaattatgcattgtccataccaactgagctaagctcacgaggac 19163603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 278 - 347
Target Start/End: Complemental strand, 39821945 - 39821877
Alignment:
Q  278 gggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggaca 347  Q
    ||||||||||||| ||| ||| |||||| ||||||  |||| ||||||||||| |||| |||||||||||    
T  39821945 gggtttgaacccc-agaccttgcatatattatgcattgtccctaccaactgagctaagctcacgaggaca 39821877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 265 - 346
Target Start/End: Original strand, 7464478 - 7464558
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggac 346  Q
    |||||||||||| |||||||||||||  || |||||||||| ||||||  |||| |||||||||||||||| ||||||||||    
T  7464478 tttgtggtggtcggggtttgaaccccg-gaccttacatatattatgcattgtccctaccaactgagttaagctcacgaggac 7464558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 265 - 348
Target Start/End: Complemental strand, 8127537 - 8127455
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggacat 348  Q
    ||||||||||||| |||||||||||| | | ||| |||||  ||||||  ||||||||||||||||||||| ||||||||||||    
T  8127537 tttgtggtggtcatggtttgaaccccaa-accttgcatattttatgcattgtccttaccaactgagttaagctcacgaggacat 8127455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 265 - 343
Target Start/End: Original strand, 2186414 - 2186491
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgag 343  Q
    |||||| ||||| ||||||||||||| ||| |||||||||| |||| |  |||| ||||||||||||||||||||||||    
T  2186414 tttgtgatggtcggggtttgaacccc-agaccttacatatattatgtattgtccataccaactgagttaagttcacgag 2186491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 288 - 347
Target Start/End: Complemental strand, 17588414 - 17588355
Alignment:
Q  288 ccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggaca 347  Q
    ||||||||||| |||||| ||||||  ||||||||||||||||||||| ||||| |||||    
T  17588414 ccccagatcttgcatatattatgcattgtccttaccaactgagttaagctcacggggaca 17588355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 269 - 343
Target Start/End: Original strand, 41442918 - 41442990
Alignment:
Q  269 tggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgag 343  Q
    ||||||||||| | ||||||||  |||||||||||||  |||||  ||||||||||| |||||||||||||||||    
T  41442918 tggtggtcaggatatgaacccc--gatcttacatatataatgcattgtccttaccaattgagttaagttcacgag 41442990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 265 - 341
Target Start/End: Original strand, 10922295 - 10922370
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacg 341  Q
    |||||||| ||| |||||||||||||  |||||| |||||| ||||||  |||| |||||||||||||||| |||||    
T  10922295 tttgtggtagtcggggtttgaaccccg-gatcttgcatatattatgcattgtccctaccaactgagttaagctcacg 10922370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 265 - 340
Target Start/End: Original strand, 25441487 - 25441561
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcac 340  Q
    |||||||||| | ||||||||||||| ||| ||| |||||| ||||||  |||| ||||||||||| |||||||||    
T  25441487 tttgtggtggccggggtttgaacccc-agaccttgcatatattatgcattgtccataccaactgagctaagttcac 25441561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 296 - 347
Target Start/End: Original strand, 53633634 - 53633685
Alignment:
Q  296 cttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggaca 347  Q
    |||||||||| ||||||   |||||||||||||||||||| |||||||||||    
T  53633634 cttacatatattatgcattatccttaccaactgagttaagctcacgaggaca 53633685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 265 - 347
Target Start/End: Original strand, 1149056 - 1149137
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggaca 347  Q
    |||||||||  ||||||| ||||||  ||| ||| |||||| ||||||  |||||||||||||||| |||| |||||||||||    
T  1149056 tttgtggtgtccagggttcgaaccct-agaccttgcatatattatgcattgtccttaccaactgagctaagctcacgaggaca 1149137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 265 - 347
Target Start/End: Complemental strand, 21160125 - 21160045
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggaca 347  Q
    |||||||||||  |||||||||||||| || |||||||||| ||||||   ||| || |||||||||||||||||||| ||||    
T  21160125 tttgtggtggtg-gggtttgaaccccc-gaccttacatatattatgcattatccatatcaactgagttaagttcacgacgaca 21160045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 265 - 347
Target Start/End: Original strand, 33633305 - 33633386
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggaca 347  Q
    |||||||||||||| ||| |||| ||  ||||||||||||| ||||||  |||  ||| |||||||||||| |||||||||||    
T  33633305 tttgtggtggtcagagttcgaactccg-gatcttacatatattatgcattgtctatactaactgagttaagctcacgaggaca 33633386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 265 - 347
Target Start/End: Original strand, 51882187 - 51882268
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggaca 347  Q
    |||||||||| | ||||||||||||   |||||| |||||| ||||||  |||| |||||||||||||||| ||||| |||||    
T  51882187 tttgtggtggccggggtttgaaccctg-gatcttgcatatattatgcattgtccataccaactgagttaagctcacggggaca 51882268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 307 - 341
Target Start/End: Complemental strand, 54897353 - 54897319
Alignment:
Q  307 tatgcaaggtccttaccaactgagttaagttcacg 341  Q
    ||||||| |||||||||||||||||||||||||||    
T  54897353 tatgcaatgtccttaccaactgagttaagttcacg 54897319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 300 - 345
Target Start/End: Complemental strand, 11436547 - 11436502
Alignment:
Q  300 catatagtatgcaaggtccttaccaactgagttaagttcacgagga 345  Q
    |||||| |||||||  ||| ||||||||||||||||||||||||||    
T  11436547 catataatatgcaatatccctaccaactgagttaagttcacgagga 11436502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 315 - 348
Target Start/End: Original strand, 51250269 - 51250302
Alignment:
Q  315 gtccttaccaactgagttaagttcacgaggacat 348  Q
    ||||||||||||||||||||| ||||||||||||    
T  51250269 gtccttaccaactgagttaagctcacgaggacat 51250302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 266 - 346
Target Start/End: Original strand, 36321481 - 36321561
Alignment:
Q  266 ttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggac 346  Q
    |||||||||| |||||| ||||||||| | ||| |||||| ||||||  |||||||||||||||| |||| ||||||||||    
T  36321481 ttgtggtggttagggttcgaacccccaaaccttgcatatattatgcattgtccttaccaactgagctaagctcacgaggac 36321561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 265 - 341
Target Start/End: Complemental strand, 11647271 - 11647196
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacg 341  Q
    ||||||||||||||| || ||||||| | | ||| |||||| ||||||  |||||||||||||||||||||||||||    
T  11647271 tttgtggtggtcaggattcgaaccccaa-accttgcatatattatgcattgtccttaccaactgagttaagttcacg 11647196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 265 - 343
Target Start/End: Original strand, 11318182 - 11318260
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgag 343  Q
    |||||||||||  |||||||||||||||||||| ||||||  ||||||   |||||| ||| ||||||||| |||||||    
T  11318182 tttgtggtggttggggtttgaacccccagatctaacatattttatgcattatccttatcaattgagttaagctcacgag 11318260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 265 - 341
Target Start/End: Original strand, 16579361 - 16579436
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacg 341  Q
    |||||||||||||||||||||| || | || ||| |||||| ||||||  || | ||||||||||||||||||||||    
T  16579361 tttgtggtggtcagggtttgaa-ccacggaccttgcatatattatgcattgttcataccaactgagttaagttcacg 16579436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 265 - 312
Target Start/End: Complemental strand, 1809118 - 1809072
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgca 312  Q
    |||||||||||||||||||||| ||||| |||||||||||| ||||||    
T  1809118 tttgtggtggtcagggtttgaa-ccccaaatcttacatatattatgca 1809072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 288 - 347
Target Start/End: Complemental strand, 3389214 - 3389155
Alignment:
Q  288 ccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggaca 347  Q
    ||||||||||| |||||| ||||||  |||| |||||||||||||| |||||||| ||||    
T  3389214 ccccagatcttgcatatattatgcattgtccataccaactgagttatgttcacgaagaca 3389155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 268 - 347
Target Start/End: Complemental strand, 6489078 - 6489000
Alignment:
Q  268 gtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggaca 347  Q
    ||||||| | ||||||||||||| ||| ||| |||||| ||||||  |||| ||||||||||| |||| |||||||||||    
T  6489078 gtggtggccggggtttgaacccc-agaccttgcatatattatgcattgtccctaccaactgagctaagctcacgaggaca 6489000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 265 - 347
Target Start/End: Complemental strand, 5614838 - 5614758
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggaca 347  Q
    |||||||||||  |||||||||||||| || |||||||||| ||||||   ||| || |||||||||||||||||||| ||||    
T  5614838 tttgtggtggtg-gggtttgaaccccc-gaccttacatatattatgcattatccatatcaactgagttaagttcacgacgaca 5614758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 268 - 346
Target Start/End: Complemental strand, 15889482 - 15889405
Alignment:
Q  268 gtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggac 346  Q
    ||||||||| ||||||||||||  ||| ||| |||||| ||||||  |||| ||||||||||| |||| ||||||||||    
T  15889482 gtggtggtcggggtttgaaccct-agaccttgcatatattatgcattgtccctaccaactgagctaagctcacgaggac 15889405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 268 - 346
Target Start/End: Complemental strand, 29695086 - 29695009
Alignment:
Q  268 gtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggac 346  Q
    ||||||||| ||||||||||| | | | |||||||||| ||||||  |||| || ||||||||||||| ||||||||||    
T  29695086 gtggtggtcggggtttgaaccacga-accttacatatattatgcattgtccatatcaactgagttaaggtcacgaggac 29695009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 265 - 347
Target Start/End: Complemental strand, 37932404 - 37932323
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggaca 347  Q
    |||||||||| ||||||| |||||||  || ||| |||||| ||||||  |||| ||||||||||| |||| |||||||||||    
T  37932404 tttgtggtggccagggttcgaaccccg-gaccttgcatatattatgcattgtccataccaactgagctaagctcacgaggaca 37932323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 689593 - 689540
Alignment:
Q  294 atcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggaca 347  Q
    |||||||||||| ||| ||  |||| || |||||||||||||||||||||||||    
T  689593 atcttacatatattatacattgtccatatcaactgagttaagttcacgaggaca 689540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 342
Target Start/End: Original strand, 11310438 - 11310514
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacga 342  Q
    ||||||||||||||||||| || ||||||||||| |||||| ||| ||  ||||  |||||||||| |||| ||||||    
T  11310438 tttgtggtggtcagggttt-aaaccccagatcttgcatatattatacattgtccaaaccaactgagctaagctcacga 11310514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 315 - 348
Target Start/End: Original strand, 40837939 - 40837972
Alignment:
Q  315 gtccttaccaactgagttaagttcacgaggacat 348  Q
    |||| |||||||||||||||||||||||||||||    
T  40837939 gtccataccaactgagttaagttcacgaggacat 40837972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000005; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 265 - 346
Target Start/End: Original strand, 8269355 - 8269435
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggac 346  Q
    |||||||||||| |||||||||||||  || ||| |||||| |||| |  |||||||||||||||| |||||||||||||||    
T  8269355 tttgtggtggtcggggtttgaaccccg-gaccttgcatatattatgtattgtccttaccaactgagctaagttcacgaggac 8269435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 265 - 349
Target Start/End: Complemental strand, 14768881 - 14768797
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggacatc 349  Q
    |||||||||||| ||||||||||||| | |  ||||||||| ||| ||  |||| |||||||||||| ||| ||||||| |||||    
T  14768881 tttgtggtggtcggggtttgaaccccgaaactttacatatattatacattgtccctaccaactgagtcaagctcacgagaacatc 14768797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 296 - 348
Target Start/End: Original strand, 30678830 - 30678882
Alignment:
Q  296 cttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggacat 348  Q
    |||||||||| ||||||  |||| |||||||||||||||| ||||||||||||    
T  30678830 cttacatatattatgcattgtccctaccaactgagttaagctcacgaggacat 30678882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 289 - 349
Target Start/End: Complemental strand, 52267815 - 52267755
Alignment:
Q  289 cccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggacatc 349  Q
    |||||| ||| |||||  ||||||  ||||||||||||||||||||| |||||||||||||    
T  52267815 cccagaccttgcatattttatgcattgtccttaccaactgagttaagctcacgaggacatc 52267755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 265 - 348
Target Start/End: Complemental strand, 1091253 - 1091171
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggacat 348  Q
    |||||||||||||| ||||||||||| | | ||| |||| | ||||||  |||  |||||||||||||||| ||||||||||||    
T  1091253 tttgtggtggtcagagtttgaaccccga-accttgcatacattatgcattgtctataccaactgagttaagctcacgaggacat 1091171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 280 - 343
Target Start/End: Original strand, 3509942 - 3510005
Alignment:
Q  280 gtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgag 343  Q
    |||||||||||| || ||| |||||| ||||||  |||| ||||||||||| ||||||||||||    
T  3509942 gtttgaacccccggaccttgcatatattatgcattgtccataccaactgagctaagttcacgag 3510005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 265 - 347
Target Start/End: Original strand, 6219850 - 6219930
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggaca 347  Q
    ||||||||||||||| |||||||||   || |||||||||| |||| |  |||| ||||||| |||||||| |||||||||||    
T  6219850 tttgtggtggtcaggatttgaacccg--gaccttacatatattatgtattgtccctaccaaccgagttaagctcacgaggaca 6219930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 300 - 347
Target Start/End: Original strand, 31061924 - 31061971
Alignment:
Q  300 catatagtatgcaaggtccttaccaactgagttaagttcacgaggaca 347  Q
    |||||| ||||||  ||||||||||||||||||||||||| |||||||    
T  31061924 catataatatgcattgtccttaccaactgagttaagttcatgaggaca 31061971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 265 - 347
Target Start/End: Complemental strand, 1794670 - 1794589
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggaca 347  Q
    ||||||||||||  ||||||||||||  |||||| |||||| ||||||  |||| ||| ||||||| |||| |||||||||||    
T  1794670 tttgtggtggtcgaggtttgaaccccg-gatcttgcatatattatgcattgtccatactaactgagctaagctcacgaggaca 1794589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 297 - 347
Target Start/End: Complemental strand, 18521290 - 18521240
Alignment:
Q  297 ttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggaca 347  Q
    |||| |||| ||||||  ||||||||||| |||||||||||||||||||||    
T  18521290 ttacgtatattatgcattgtccttaccaattgagttaagttcacgaggaca 18521240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 288 - 346
Target Start/End: Original strand, 30798756 - 30798814
Alignment:
Q  288 ccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggac 346  Q
    |||| ||||||||||||| ||||||  |||||| |||| ||||||||| ||||||||||    
T  30798756 ccccggatcttacatatattatgcattgtccttgccaaatgagttaagctcacgaggac 30798814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 342
Target Start/End: Complemental strand, 29042611 - 29042535
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacga 342  Q
    |||||||||||| || ||||||||||  ||||||||||||| ||||||   ||| |||||| ||||||||||| ||||    
T  29042611 tttgtggtggtcgggatttgaaccccg-gatcttacatatattatgcattatccctaccaattgagttaagtttacga 29042535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 346
Target Start/End: Original strand, 33153867 - 33153947
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggac 346  Q
    ||||||||| || ||||||||||| |  || |||||||||| ||||||  |||| |||||||||||||||| |||| |||||    
T  33153867 tttgtggtgttcggggtttgaacctcg-gaccttacatatattatgcattgtccctaccaactgagttaagctcacaaggac 33153947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000008; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 265 - 348
Target Start/End: Original strand, 7388026 - 7388108
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggacat 348  Q
    |||||||||||| ||||||||| ||| | | |||||||||| ||||||  ||||  ||||||||||||||| ||||||||||||    
T  7388026 tttgtggtggtcggggtttgaatcccga-accttacatatattatgcattgtcccaaccaactgagttaagctcacgaggacat 7388108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 265 - 347
Target Start/End: Complemental strand, 37930118 - 37930037
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggaca 347  Q
    |||||||||||| ||||||||| ||| | ||| | |||||| ||||||  |||||||||||||||| |||| |||||||||||    
T  37930118 tttgtggtggtcggggtttgaatcccga-atcctgcatatattatgcattgtccttaccaactgagataagctcacgaggaca 37930037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 269 - 346
Target Start/End: Complemental strand, 5526795 - 5526719
Alignment:
Q  269 tggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggac 346  Q
    |||||||| ||||||||||||| | |||||| ||||| ||||||  |||| ||||||||||| |||| ||||||||||    
T  5526795 tggtggtcggggtttgaaccccaa-atcttatatatattatgcattgtccataccaactgagctaagctcacgaggac 5526719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 271 - 348
Target Start/End: Original strand, 34448603 - 34448679
Alignment:
Q  271 gtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggacat 348  Q
    |||||||||||||||||||   || |||||||||| ||||||  ||||  ||||||||||||||| ||||||||||||    
T  34448603 gtggtcagggtttgaaccctg-gaccttacatatattatgcattgtccaaaccaactgagttaagctcacgaggacat 34448679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 268 - 347
Target Start/End: Complemental strand, 5579764 - 5579686
Alignment:
Q  268 gtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggaca 347  Q
    ||||||||| ||||||||||||| ||| ||| |||||| ||||||  |||| ||||||||||| |||| |||| ||||||    
T  5579764 gtggtggtcggggtttgaacccc-agaccttgcatatattatgcactgtccctaccaactgagctaagctcacaaggaca 5579686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 268 - 347
Target Start/End: Original strand, 27833391 - 27833469
Alignment:
Q  268 gtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggaca 347  Q
    ||||||||| |||||||||||||  || |||||||||| ||||||  |||||||||||||||| || | | |||||||||    
T  27833391 gtggtggtcggggtttgaaccccg-gaccttacatatattatgcattgtccttaccaactgagctaggcttacgaggaca 27833469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 288 - 346
Target Start/End: Original strand, 7872757 - 7872815
Alignment:
Q  288 ccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggac 346  Q
    ||||||| ||| |||||| ||||||  |||||||||||||||| |||||||||| ||||    
T  7872757 ccccagaccttgcatatattatgcattgtccttaccaactgagctaagttcacgtggac 7872815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 316 - 346
Target Start/End: Original strand, 35571970 - 35572000
Alignment:
Q  316 tccttaccaactgagttaagttcacgaggac 346  Q
    |||||||||||||||||||||||||||||||    
T  35571970 tccttaccaactgagttaagttcacgaggac 35572000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 268 - 346
Target Start/End: Original strand, 40187626 - 40187703
Alignment:
Q  268 gtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggac 346  Q
    |||||| || ||||||||||| | ||| |||||||||| ||||||  |||| |||||||||||||||| ||| ||||||    
T  40187626 gtggtgttcggggtttgaaccgc-agaccttacatatattatgcattgtccctaccaactgagttaagctcatgaggac 40187703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 265 - 343
Target Start/End: Complemental strand, 44651575 - 44651498
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgag 343  Q
    |||||||||||  ||||||||||||| | | |||||||||  |||||||||||| ||||||||||| |||  |||||||    
T  44651575 tttgtggtggttggggtttgaaccccaa-accttacatattttatgcaaggtccataccaactgagctaaactcacgag 44651498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 274 - 347
Target Start/End: Original strand, 46220947 - 46221018
Alignment:
Q  274 gtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggaca 347  Q
    |||||||||||||||||| || |||||||||  ||||||  |||| |||||||||||||||| |||||| ||||    
T  46220947 gtcagggtttgaaccccc-gaccttacatatt-tatgcattgtccataccaactgagttaagctcacgaagaca 46221018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000003; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 265 - 347
Target Start/End: Complemental strand, 9977131 - 9977050
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggaca 347  Q
    |||||||||||||||||||||| ||||||| ||| |||||| ||||||   ||| |||||| ||||||||| ||| |||||||    
T  9977131 tttgtggtggtcagggtttgaa-ccccagaccttgcatatattatgcattatccataccaattgagttaagctcaggaggaca 9977050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 267 - 347
Target Start/End: Complemental strand, 788938 - 788859
Alignment:
Q  267 tgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggaca 347  Q
    |||||||||| |||||||||| || | | ||| |||||| ||||||  |||||||||||||||| |||| |||||||||||    
T  788938 tgtggtggtcggggtttgaactccga-accttgcatatattatgcattgtccttaccaactgagataagctcacgaggaca 788859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 296 - 347
Target Start/End: Complemental strand, 9987125 - 9987074
Alignment:
Q  296 cttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggaca 347  Q
    |||||||||| ||||||  ||||||||||||||||||||| ||||| |||||    
T  9987125 cttacatataatatgcattgtccttaccaactgagttaagctcacggggaca 9987074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 300 - 347
Target Start/End: Complemental strand, 20208159 - 20208112
Alignment:
Q  300 catatagtatgcaaggtccttaccaactgagttaagttcacgaggaca 347  Q
    |||||| ||||||| ||||||||||||||||||||||| ||| |||||    
T  20208159 catatactatgcaatgtccttaccaactgagttaagtttacgcggaca 20208112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 300 - 347
Target Start/End: Complemental strand, 22102182 - 22102135
Alignment:
Q  300 catatagtatgcaaggtccttaccaactgagttaagttcacgaggaca 347  Q
    |||||| ||||||| ||||||||||||||||||||||| ||| |||||    
T  22102182 catatactatgcaatgtccttaccaactgagttaagtttacgcggaca 22102135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 265 - 347
Target Start/End: Original strand, 8138445 - 8138526
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggaca 347  Q
    |||||||||||   |||||||||||| ||| |||||||||| ||||||  || |||| |||||||| ||| ||||||||||||    
T  8138445 tttgtggtggttgaggtttgaacccc-agaccttacatatattatgcattgttcttatcaactgagctaaattcacgaggaca 8138526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 271 - 345
Target Start/End: Complemental strand, 20744206 - 20744133
Alignment:
Q  271 gtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgagga 345  Q
    |||||| ||||||||||||| ||| ||| |||||| ||||||  |||| ||||||||||| |||| |||||||||    
T  20744206 gtggtcggggtttgaacccc-agaccttgcatatattatgcattgtccataccaactgagctaagctcacgagga 20744133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 268 - 346
Target Start/End: Complemental strand, 27834410 - 27834333
Alignment:
Q  268 gtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggac 346  Q
    ||||||||| ||||||||||||| ||| ||| |||||| |||||   |||| |||| ||||||||||| ||||||||||    
T  27834410 gtggtggtccgggtttgaacccc-agaccttgcatatattatgccttgtccctacccactgagttaagctcacgaggac 27834333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 296 - 341
Target Start/End: Original strand, 10497169 - 10497214
Alignment:
Q  296 cttacatatagtatgcaaggtccttaccaactgagttaagttcacg 341  Q
    |||||||||| ||||||  |||||||| ||||||||||||||||||    
T  10497169 cttacatatattatgcattgtccttacaaactgagttaagttcacg 10497214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.0000000003; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 268 - 346
Target Start/End: Original strand, 24592836 - 24592913
Alignment:
Q  268 gtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggac 346  Q
    ||||||| | ||||||||||||| ||| ||| |||||| ||||||  |||| ||||||||||| |||||||||||||||    
T  24592836 gtggtggccggggtttgaacccc-agaccttgcatatattatgcattgtccctaccaactgagctaagttcacgaggac 24592913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 265 - 343
Target Start/End: Original strand, 31815874 - 31815951
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgag 343  Q
    |||||||||||| |||||||||||||  || ||| |||||| ||||||  |||| |||||||||||||||| |||||||    
T  31815874 tttgtggtggtcggggtttgaaccccg-gaccttgcatatattatgcattgtccctaccaactgagttaagctcacgag 31815951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 265 - 346
Target Start/End: Complemental strand, 2257045 - 2256965
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggac 346  Q
    |||||||||| | ||||| ||||||| ||| ||| |||||| ||||||  |||| |||||||||||||||| ||||||||||    
T  2257045 tttgtggtggccggggttcgaacccc-agaccttgcatatattatgcattgtccataccaactgagttaagctcacgaggac 2256965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 268 - 348
Target Start/End: Original strand, 25561987 - 25562066
Alignment:
Q  268 gtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggacat 348  Q
    ||||||||| | ||||||||||| ||||||| |||||  ||||||  |||||||||||||||| |||||| ||||| ||||    
T  25561987 gtggtggtcggagtttgaacccc-agatcttgcatattttatgcactgtccttaccaactgagctaagtttacgagaacat 25562066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 265 - 340
Target Start/End: Original strand, 18324881 - 18324955
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcac 340  Q
    ||||||||| |||||||| ||| ||  ||||||| |||||| ||||||  ||||||||||||||||||||| ||||    
T  18324881 tttgtggtgttcagggttcgaatcct-agatcttgcatatattatgcattgtccttaccaactgagttaagctcac 18324955  T

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Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 265 - 344
Target Start/End: Original strand, 27412823 - 27412901
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgagg 344  Q
    |||||||||||| ||||||||||  | ||| |||||||||| ||||||  |||  |||||||||||||||| ||||||||    
T  27412823 tttgtggtggtcggggtttgaacaac-agaccttacatatattatgcattgtctctaccaactgagttaagctcacgagg 27412901  T

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Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 278 - 348
Target Start/End: Complemental strand, 5676800 - 5676731
Alignment:
Q  278 gggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggacat 348  Q
    |||||||||||||||   ||| |||||| ||||||  ||| ||||||||||||||||| ||||||||||||    
T  5676800 gggtttgaacccccacc-cttgcatatattatgcattgtcattaccaactgagttaagctcacgaggacat 5676731  T

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Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 272 - 338
Target Start/End: Complemental strand, 22359072 - 22359007
Alignment:
Q  272 tggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttc 338  Q
    ||||||||||||||||  |  |||||| |||||| ||||||  ||||||||||||||||||||||||    
T  22359072 tggtcagggtttgaactgcg-gatcttgcatatattatgcattgtccttaccaactgagttaagttc 22359007  T

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Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 346
Target Start/End: Original strand, 9383196 - 9383276
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggac 346  Q
    |||||||||| ||||| ||||| ||||| | ||| |||||| ||||||  |||| ||||||||||| |||| ||||||||||    
T  9383196 tttgtggtgg-caggggttgaaaccccaaaccttgcatatattatgcattgtccataccaactgagctaagctcacgaggac 9383276  T

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Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 346
Target Start/End: Original strand, 29798504 - 29798584
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggac 346  Q
    |||||||||||| ||||| |||||||  || |||| ||||  ||||||  |||| |||||||||||||||| ||||||||||    
T  29798504 tttgtggtggtcggggttcgaacccct-gaccttaaatattttatgcattgtccataccaactgagttaagctcacgaggac 29798584  T

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Target: scaffold0050 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 265 - 345
Target Start/End: Original strand, 53367 - 53446
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgagga 345  Q
    |||||||||||| ||||||||| ||||||| ||| |||||  ||||||  |||| | |||||||||||||| |||||||||    
T  53367 tttgtggtggtcggggtttgaa-ccccagaccttgcatattttatgcattgtcccttccaactgagttaagctcacgagga 53446  T

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Target: scaffold0262 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 346
Target Start/End: Original strand, 15917 - 15997
Alignment:
Q  265 tttgtggtggtcagggtttgaacccccagatcttacatatagtatgcaaggtccttaccaactgagttaagttcacgaggac 346  Q
    ||||||||||   ||||||||||||| ||| ||| |||||| ||| ||  ||||||||||| ||||||||| ||||||||||    
T  15917 tttgtggtggctggggtttgaacccc-agaccttgcatatattatacattgtccttaccaattgagttaagctcacgaggac 15997  T

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